Miyakogusa Predicted Gene

Lj0g3v0109989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109989.1 Non Characterized Hit- tr|I1JI38|I1JI38_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52244
PE,70.3,0,seg,NULL; PRONE,Plant specific Rop nucleotide exchanger,
PRONE; SUBFAMILY NOT NAMED,NULL; FAMILY NOT,CUFF.6333.1
         (202 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC | c...   211   4e-55
Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC | c...   201   4e-52
Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC | c...   200   8e-52
Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC | c...   179   2e-45
Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC | c...   176   1e-44
Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC | ...   155   2e-38
Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC | c...   129   2e-30
Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC | c...   128   4e-30
Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC | c...   128   4e-30
Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC | c...   127   7e-30
Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC | c...   119   2e-27
Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC | c...   114   7e-26
Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC | c...    58   6e-09
Medtr5g026140.1 | RHO guanyl-nucleotide exchange factor | LC | c...    49   3e-06

>Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr5:34865519-34861053 | 20130731
          Length = 576

 Score =  211 bits (537), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 101/138 (73%), Positives = 111/138 (80%), Gaps = 2/138 (1%)

Query: 67  GWPIRKAAVSKRGKSDEKENEPVSHLEDAKITXXXXXXXXXX--XXXERFAKLLLGEDMS 124
            +PIRKA +SK  KSDEKENEPVS ++D K+T               ERFAKLLLGEDMS
Sbjct: 41  SFPIRKATMSKCSKSDEKENEPVSQVDDKKVTSISSKISGSGGDMMKERFAKLLLGEDMS 100

Query: 125 GSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEWLVCVSDHIVELMP 184
           GSGKGV TALAISNAITNLC TVFGQLWRLEP+PCEKK  W+REM+WL+CV DHIVELMP
Sbjct: 101 GSGKGVSTALAISNAITNLCGTVFGQLWRLEPVPCEKKEKWQREMDWLLCVGDHIVELMP 160

Query: 185 SWQTFPDGSKLEVMTCRP 202
           SWQT+PDGSK EVMTCRP
Sbjct: 161 SWQTYPDGSKQEVMTCRP 178


>Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr3:31131780-31127698 | 20130731
          Length = 595

 Score =  201 bits (511), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/207 (57%), Positives = 132/207 (63%), Gaps = 16/207 (7%)

Query: 1   MESLSNKGENMQKKRDGYRSPRSAAKGAKVVNKXXXXXXXXXXXXXXTEEXXXXXXXXXX 60
           ME+LS   +N QKK+DG RS  S    + V ++              T E          
Sbjct: 1   METLS---KNSQKKKDGSRS--SCVTDSSVESRTTSFSGSNSTSSISTSEVEAKSNGTP- 54

Query: 61  XXXXXLGWPIRKAAVSKRGKS---DEKENEPVSHLE--DAKITXXXXXXXXXXXXXERFA 115
                LGWPI KA +S   +S   D+KEN+  S++E    K T             ERFA
Sbjct: 55  -----LGWPILKATLSSSKRSCSSDDKENKHKSNMEVEHTKCTTMDVKVSDVDMMKERFA 109

Query: 116 KLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEWLVCV 175
           KLLLGEDMSGSGKGVCTALAISNAITNLCAT FGQLWRLEPLPCEKK MW+REMEWLV V
Sbjct: 110 KLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKKMWQREMEWLVSV 169

Query: 176 SDHIVELMPSWQTFPDGSKLEVMTCRP 202
           SDHIVEL+PSWQTFPDG KLEVMTCRP
Sbjct: 170 SDHIVELIPSWQTFPDGKKLEVMTCRP 196


>Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC |
           chr3:31131780-31127698 | 20130731
          Length = 435

 Score =  200 bits (508), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 118/207 (57%), Positives = 132/207 (63%), Gaps = 16/207 (7%)

Query: 1   MESLSNKGENMQKKRDGYRSPRSAAKGAKVVNKXXXXXXXXXXXXXXTEEXXXXXXXXXX 60
           ME+LS   +N QKK+DG RS  S    + V ++              T E          
Sbjct: 1   METLS---KNSQKKKDGSRS--SCVTDSSVESRTTSFSGSNSTSSISTSEVEAKSNGTP- 54

Query: 61  XXXXXLGWPIRKAAVSKRGKS---DEKENEPVSHLE--DAKITXXXXXXXXXXXXXERFA 115
                LGWPI KA +S   +S   D+KEN+  S++E    K T             ERFA
Sbjct: 55  -----LGWPILKATLSSSKRSCSSDDKENKHKSNMEVEHTKCTTMDVKVSDVDMMKERFA 109

Query: 116 KLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEWLVCV 175
           KLLLGEDMSGSGKGVCTALAISNAITNLCAT FGQLWRLEPLPCEKK MW+REMEWLV V
Sbjct: 110 KLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKKMWQREMEWLVSV 169

Query: 176 SDHIVELMPSWQTFPDGSKLEVMTCRP 202
           SDHIVEL+PSWQTFPDG KLEVMTCRP
Sbjct: 170 SDHIVELIPSWQTFPDGKKLEVMTCRP 196


>Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr7:23784213-23780879 | 20130731
          Length = 656

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/137 (63%), Positives = 98/137 (71%)

Query: 66  LGWPIRKAAVSKRGKSDEKENEPVSHLEDAKITXXXXXXXXXXXXXERFAKLLLGEDMSG 125
           LGW +++ + S      + E+    HL + +               ERFAKLLLGEDMSG
Sbjct: 144 LGWNVKEISESDCISVHDSEDGKKKHLVEKEFVKQVSALSEIEMMKERFAKLLLGEDMSG 203

Query: 126 SGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEWLVCVSDHIVELMPS 185
            G GV TALAISNAITNLCAT+FGQLWRLEPL  EKKAMWRREMEW + VSDHIVEL P+
Sbjct: 204 CGNGVPTALAISNAITNLCATLFGQLWRLEPLRSEKKAMWRREMEWFLSVSDHIVELTPN 263

Query: 186 WQTFPDGSKLEVMTCRP 202
           WQTFPDGSKLEVMTCRP
Sbjct: 264 WQTFPDGSKLEVMTCRP 280


>Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr4:6266234-6262535 | 20130731
          Length = 542

 Score =  176 bits (446), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 85/127 (66%), Positives = 96/127 (75%)

Query: 76  SKRGKSDEKENEPVSHLEDAKITXXXXXXXXXXXXXERFAKLLLGEDMSGSGKGVCTALA 135
           S+ G   E+E +  S   + +++             ERFAKLLLGEDMSGSG GV TALA
Sbjct: 66  SRDGSEVEEEKDSSSENFEKQVSVLPMPVLEIEMMKERFAKLLLGEDMSGSGNGVPTALA 125

Query: 136 ISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEWLVCVSDHIVELMPSWQTFPDGSKL 195
           ISNAITNLCATVFGQLWRLEPL  EKKAMW+REMEWL+CVSDHIVE  P+WQTFPDGS+ 
Sbjct: 126 ISNAITNLCATVFGQLWRLEPLSPEKKAMWQREMEWLLCVSDHIVEFKPTWQTFPDGSRF 185

Query: 196 EVMTCRP 202
           EVMTCRP
Sbjct: 186 EVMTCRP 192


>Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC |
           chr4:28908900-28905362 | 20130731
          Length = 558

 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/91 (81%), Positives = 78/91 (85%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERFAKLLLGEDMSG GKGVCTALAISNAITNL ATVFG+LWRLEPL  +KKAMWRREMEW
Sbjct: 93  ERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEW 152

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCRP 202
           L+CVSD IVEL+PS Q FP G   EVM  RP
Sbjct: 153 LLCVSDSIVELVPSVQQFPGGGTYEVMATRP 183


>Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr6:32999908-32996320 | 20130731
          Length = 549

 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 58/90 (64%), Positives = 72/90 (80%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERFAKLLLGEDMSG+G GV +ALA+SNAITNL A+VFG+  +LEP+  E+K  WR+E+EW
Sbjct: 102 ERFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFGEQSKLEPMSQERKTRWRKEIEW 161

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCR 201
           L+ V+DHIVE  PS Q   DGS +E+MT R
Sbjct: 162 LLSVTDHIVEFAPSQQLAKDGSTMEIMTTR 191


>Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC |
           chr8:11477789-11473977 | 20130731
          Length = 470

 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/91 (67%), Positives = 72/91 (79%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERF+KLLLGEDMSG GKGVCTA+ ISN+ITNL ATVFGQ  +LEPL  EKKAMW+REM  
Sbjct: 103 ERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNC 162

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCRP 202
           L+ V D+IVE  P+ Q   DG+ +E+MT RP
Sbjct: 163 LMSVCDYIVEFAPTAQYLDDGTIVEMMTSRP 193


>Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr8:11478040-11473877 | 20130731
          Length = 470

 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/91 (67%), Positives = 72/91 (79%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERF+KLLLGEDMSG GKGVCTA+ ISN+ITNL ATVFGQ  +LEPL  EKKAMW+REM  
Sbjct: 103 ERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNC 162

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCRP 202
           L+ V D+IVE  P+ Q   DG+ +E+MT RP
Sbjct: 163 LMSVCDYIVEFAPTAQYLDDGTIVEMMTSRP 193


>Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr2:43813630-43810264 | 20130731
          Length = 533

 Score =  127 bits (319), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 74/90 (82%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERFAKLLLGEDMSG GKGV +ALA+SNA TNL A++FG+  RLEP+P E+KA WR+E++ 
Sbjct: 92  ERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASIFGEQKRLEPMPAERKARWRKEIDL 151

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCR 201
           L+ V+D++VE++PS Q   DG+ +E+MT R
Sbjct: 152 LLSVTDYVVEMVPSQQKSKDGTSMEIMTTR 181


>Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr7:29297652-29300584 | 20130731
          Length = 532

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/91 (64%), Positives = 69/91 (75%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           ERFAKLLLGEDMSG GKGV TA+ ISNAITNL ATVFGQ  +LEPL  EKK MW+REM+ 
Sbjct: 119 ERFAKLLLGEDMSGGGKGVSTAVTISNAITNLYATVFGQSLKLEPLKPEKKIMWKREMKV 178

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMTCRP 202
           L+ V D+I E  P+ Q   DG+ +E+M  RP
Sbjct: 179 LLSVCDYIQEFAPTAQYLEDGTIVEMMKSRP 209


>Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr5:10622248-10613821 | 20130731
          Length = 558

 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 51/88 (57%), Positives = 70/88 (79%)

Query: 112 ERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMEW 171
           E F+KLLLGED++G  KG+ TALA+SNAITNL  TVFG+LW+LEPL  E+K+ WRREM+W
Sbjct: 124 ENFSKLLLGEDVTGGTKGITTALALSNAITNLSVTVFGELWKLEPLSEERKSKWRREMDW 183

Query: 172 LVCVSDHIVELMPSWQTFPDGSKLEVMT 199
           L+  ++++VEL+P+ Q   +G   E+MT
Sbjct: 184 LLSPTNYMVELVPAKQNNANGRIFEIMT 211


>Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr4:3547567-3550746 | 20130731
          Length = 400

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 36/45 (80%)

Query: 157 LPCEKKAMWRREMEWLVCVSDHIVELMPSWQTFPDGSKLEVMTCR 201
           +P E+KA WR+E++WL+ V+D++VE++P+ Q   DGS +E+MT R
Sbjct: 1   MPPERKARWRKEIDWLLSVTDYVVEMVPTQQKSKDGSIMEIMTTR 45


>Medtr5g026140.1 | RHO guanyl-nucleotide exchange factor | LC |
           chr5:10738291-10738789 | 20130731
          Length = 100

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 35/49 (71%)

Query: 144 CATVFGQLWRLEPLPCEKKAMWRREMEWLVCVSDHIVELMPSWQTFPDG 192
              +FG+LW L+ L  E+K+ WRR+M+WL+  ++++VEL+P+ Q   +G
Sbjct: 9   TVIIFGELWNLKQLSEERKSKWRRKMDWLLPPTNYMVELVPAKQNNANG 57