Miyakogusa Predicted Gene

Lj0g3v0109499.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109499.1 tr|I3T8R8|I3T8R8_LOTJA Peptidyl-prolyl cis-trans
isomerase OS=Lotus japonicus PE=4
SV=1,97.78,3e-18,FKBP_PPIASE,Peptidyl-prolyl cis-trans isomerase,
FKBP-type, domain; FKBP_C,Peptidyl-prolyl cis-trans,CUFF.6291.1
         (45 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g053470.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ...    70   5e-13
Medtr8g012340.1 | peptidyl-prolyl cis-trans isomerase FKBP62-lik...    69   1e-12
Medtr8g080980.1 | peptidyl-prolyl cis-trans isomerase FKBP62-lik...    61   2e-10
Medtr8g038785.1 | peptidyl-prolyl cis-trans isomerase, FKBP-type...    49   9e-07
Medtr1g017870.2 | FKBP-type peptidyl-prolyl cis-trans isomerase ...    48   2e-06
Medtr1g017870.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ...    48   2e-06
Medtr8g012380.1 | FKBP-type peptidyl-prolyl cis-trans isomerase ...    47   4e-06

>Medtr7g053470.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
          HC | chr7:18851017-18844062 | 20130731
          Length = 544

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/37 (83%), Positives = 32/37 (86%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          E+GDEV VHYTGTLLDGTKFDSSR R  PF FTLGQG
Sbjct: 50 ESGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQG 86


>Medtr8g012340.1 | peptidyl-prolyl cis-trans isomerase FKBP62-like
          protein | HC | chr8:3497984-3493093 | 20130731
          Length = 575

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/37 (81%), Positives = 33/37 (89%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          + GDEV+VHYTGTLLDGTKFDSSR RG  F+FTLGQG
Sbjct: 56 DVGDEVHVHYTGTLLDGTKFDSSRDRGTTFNFTLGQG 92


>Medtr8g080980.1 | peptidyl-prolyl cis-trans isomerase FKBP62-like
          protein | HC | chr8:34977709-34974074 | 20130731
          Length = 570

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 28/35 (80%)

Query: 11 GDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          GD+V VHYTG LLDGTKFDSSR RG  F F LGQG
Sbjct: 56 GDQVEVHYTGILLDGTKFDSSRDRGTTFKFKLGQG 90


>Medtr8g038785.1 | peptidyl-prolyl cis-trans isomerase, FKBP-type
           protein | LC | chr8:14392416-14387801 | 20130731
          Length = 594

 Score = 48.9 bits (115), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 29/42 (69%), Gaps = 2/42 (4%)

Query: 6   PFSEAGDEVNVHYTGT-LLDGTKFDSSRHRGIP-FDFTLGQG 45
           P     DEV+VH+TGT LLDG KFDSS  RG   F FTLG+G
Sbjct: 183 PIPNLDDEVHVHFTGTLLLDGKKFDSSSDRGTSTFSFTLGRG 224


>Medtr1g017870.2 | FKBP-type peptidyl-prolyl cis-trans isomerase |
          HC | chr1:5082321-5088338 | 20130731
          Length = 550

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/34 (61%), Positives = 23/34 (67%)

Query: 12 DEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          D V +HY GTLLDGTK  S+R    P  FTLGQG
Sbjct: 58 DHVTLHYVGTLLDGTKLGSTRDSDSPVTFTLGQG 91


>Medtr1g017870.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
          HC | chr1:5082312-5088338 | 20130731
          Length = 580

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/34 (61%), Positives = 23/34 (67%)

Query: 12 DEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          D V +HY GTLLDGTK  S+R    P  FTLGQG
Sbjct: 58 DHVTLHYVGTLLDGTKLGSTRDSDSPVTFTLGQG 91


>Medtr8g012380.1 | FKBP-type peptidyl-prolyl cis-trans isomerase |
          HC | chr8:3520636-3515863 | 20130731
          Length = 151

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/38 (57%), Positives = 24/38 (63%)

Query: 8  SEAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          +  GD+V VHY G L DGT FDSS  R  P DF LG G
Sbjct: 47 AHKGDKVKVHYRGKLTDGTVFDSSFERNNPIDFELGGG 84