Miyakogusa Predicted Gene

Lj0g3v0105139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105139.1 Non Characterized Hit- tr|I3T3W6|I3T3W6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,Calycin; BCTLIPOCALIN,Lipocalin, bacterial; APOLIPOPROTEIN
D-RELATED,NULL; APOLIPOPRO,CUFF.5988.1
         (184 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g131390.1 | temperature-induced lipocalin | HC | chr4:5481...   344   2e-95
Medtr4g131400.1 | temperature-induced lipocalin | HC | chr4:5482...   274   4e-74
Medtr4g131500.1 | temperature-induced lipocalin | HC | chr4:5484...   249   7e-67
Medtr5g082980.1 | temperature-induced lipocalin, putative | LC |...    64   1e-10

>Medtr4g131390.1 | temperature-induced lipocalin | HC |
           chr4:54818093-54816204 | 20130731
          Length = 184

 Score =  344 bits (883), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 161/184 (87%), Positives = 171/184 (92%)

Query: 1   MANKAMEVVRGLDLKRYMGRWYEIACFPSRFQPSDGMNTRATYTLNDDGTVHVLNETWSG 60
           MANK M+V RG+DLKRYMGRWYEIACFPSRFQPSDG NTRATYTL DDGTV+VLNETWSG
Sbjct: 1   MANKEMDVARGVDLKRYMGRWYEIACFPSRFQPSDGKNTRATYTLRDDGTVNVLNETWSG 60

Query: 61  GKRSFIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWVLFIDHDYQYALIGQPSR 120
           GKRS+IEG+AYKADPNSDEAKLKVKFYVPP LPIIPV GDYWVL +DHDY YALIGQPSR
Sbjct: 61  GKRSYIEGTAYKADPNSDEAKLKVKFYVPPMLPIIPVTGDYWVLHLDHDYHYALIGQPSR 120

Query: 121 RYLWILCRKPHLDEETYNELVQKATDEGYDVSKLHKTPQSDTPPEEEGPQDTKGIWWIKS 180
            YLWILCR+PHLDEE YNELVQKA +EGYDVSKL KTPQSDTPPE+EGP+DTKGIWW KS
Sbjct: 121 NYLWILCRQPHLDEEIYNELVQKAKEEGYDVSKLRKTPQSDTPPEQEGPEDTKGIWWFKS 180

Query: 181 LFGK 184
           LFGK
Sbjct: 181 LFGK 184


>Medtr4g131400.1 | temperature-induced lipocalin | HC |
           chr4:54820948-54819199 | 20130731
          Length = 168

 Score =  274 bits (700), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 127/162 (78%), Positives = 143/162 (88%)

Query: 4   KAMEVVRGLDLKRYMGRWYEIACFPSRFQPSDGMNTRATYTLNDDGTVHVLNETWSGGKR 63
           K  EVV+G+DL+RYMGRWYEIA FPS FQP +G NTRATYTLN DGTVHVLNETW+ GKR
Sbjct: 7   KDKEVVKGVDLERYMGRWYEIASFPSFFQPKNGENTRATYTLNSDGTVHVLNETWNNGKR 66

Query: 64  SFIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWVLFIDHDYQYALIGQPSRRYL 123
           + IEGSAYKADP SDEAKLKVKFYVPPFLPIIP VGDYW+L++D DYQYALIG P+ ++L
Sbjct: 67  TSIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPAVGDYWILYLDEDYQYALIGGPTNKFL 126

Query: 124 WILCRKPHLDEETYNELVQKATDEGYDVSKLHKTPQSDTPPE 165
           WIL R+PHLDE  YN+LV+KA +EGYDVSKLHKTPQSD PPE
Sbjct: 127 WILSRQPHLDETIYNQLVEKAKEEGYDVSKLHKTPQSDPPPE 168


>Medtr4g131500.1 | temperature-induced lipocalin | HC |
           chr4:54849520-54848232 | 20130731
          Length = 163

 Score =  249 bits (637), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 114/159 (71%), Positives = 137/159 (86%)

Query: 7   EVVRGLDLKRYMGRWYEIACFPSRFQPSDGMNTRATYTLNDDGTVHVLNETWSGGKRSFI 66
           EVV+G+DL+RYMGRWYEIA FPS FQP++G NTRATY LN +GTV VLNETW+ GKR  I
Sbjct: 5   EVVKGVDLERYMGRWYEIASFPSFFQPTNGENTRATYILNSNGTVDVLNETWNNGKRESI 64

Query: 67  EGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWVLFIDHDYQYALIGQPSRRYLWIL 126
            G AYKADPNSDEAKLKV+F VPPFLP IP VGDYW+L++D DYQ+ALIG P+  +LWIL
Sbjct: 65  HGIAYKADPNSDEAKLKVRFLVPPFLPFIPAVGDYWILYLDQDYQFALIGGPTELFLWIL 124

Query: 127 CRKPHLDEETYNELVQKATDEGYDVSKLHKTPQSDTPPE 165
            R+ +LD+E+YN+LVQKA D+GYDV+KLHKTPQS+ PP+
Sbjct: 125 SRQTYLDDESYNKLVQKAKDDGYDVTKLHKTPQSNPPPQ 163


>Medtr5g082980.1 | temperature-induced lipocalin, putative | LC |
           chr5:35800471-35801131 | 20130731
          Length = 110

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)

Query: 116 GQPSRRYLW---ILCRKPHLDEETYNELVQKATDEGYDVSKLHKTPQSDTPPE 165
           G+  RR  W     C++ HLD+E+YN+LVQK  D+GYD +KLHKTPQS  PP+
Sbjct: 58  GRNPRRRWWQKRCTCKQTHLDDESYNKLVQKTKDDGYDATKLHKTPQSKPPPQ 110