Miyakogusa Predicted Gene
- Lj0g3v0093719.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0093719.2 Non Characterized Hit- tr|I3SSP1|I3SSP1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.02,0,SHIKIMTKNASE,Shikimate kinase; P-loop containing
nucleoside triphosphate hydrolases,NULL; no descrip,CUFF.5301.2
(253 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g033510.4 | shikimate kinase | HC | chr6:10838781-10833894... 119 4e-27
Medtr6g033510.7 | shikimate kinase | HC | chr6:10838781-10833872... 119 4e-27
Medtr6g033510.11 | shikimate kinase | HC | chr6:10838781-1083387... 119 4e-27
Medtr6g033510.8 | shikimate kinase | HC | chr6:10838781-10833872... 119 4e-27
Medtr6g033510.1 | shikimate kinase | HC | chr6:10838781-10833894... 119 4e-27
Medtr6g033510.10 | shikimate kinase | HC | chr6:10838781-1083387... 118 4e-27
Medtr6g033510.12 | shikimate kinase | HC | chr6:10838781-1083387... 118 4e-27
Medtr6g033510.9 | shikimate kinase | HC | chr6:10838781-10833894... 118 4e-27
Medtr6g033510.13 | shikimate kinase | HC | chr6:10838821-1083387... 118 4e-27
Medtr6g033510.2 | shikimate kinase | HC | chr6:10838651-10833939... 118 6e-27
Medtr6g033510.5 | shikimate kinase | HC | chr6:10838781-10833894... 118 6e-27
Medtr6g033510.6 | shikimate kinase | HC | chr6:10838781-10833894... 118 6e-27
Medtr6g033510.3 | shikimate kinase | HC | chr6:10838023-10833939... 114 8e-26
>Medtr6g033510.4 | shikimate kinase | HC | chr6:10838781-10833894 |
20130731
Length = 294
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKS 104
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 105 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 164
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 165 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 223
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 224 EVMDELCALYNKYKDGYATADA 245
>Medtr6g033510.7 | shikimate kinase | HC | chr6:10838781-10833872 |
20130731
Length = 294
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKS 104
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 105 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 164
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 165 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 223
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 224 EVMDELCALYNKYKDGYATADA 245
>Medtr6g033510.11 | shikimate kinase | HC | chr6:10838781-10833872 |
20130731
Length = 294
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKS 104
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 105 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 164
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 165 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 223
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 224 EVMDELCALYNKYKDGYATADA 245
>Medtr6g033510.8 | shikimate kinase | HC | chr6:10838781-10833872 |
20130731
Length = 294
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKS 104
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 105 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 164
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 165 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 223
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 224 EVMDELCALYNKYKDGYATADA 245
>Medtr6g033510.1 | shikimate kinase | HC | chr6:10838781-10833894 |
20130731
Length = 294
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKS 104
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 105 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 164
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 165 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 223
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 224 EVMDELCALYNKYKDGYATADA 245
>Medtr6g033510.10 | shikimate kinase | HC | chr6:10838781-10833872 |
20130731
Length = 274
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKS 104
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 105 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 164
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 165 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 223
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 224 EVMDELCALYNKYKDGYATADA 245
>Medtr6g033510.12 | shikimate kinase | HC | chr6:10838781-10833872 |
20130731
Length = 274
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKS 104
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 105 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 164
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 165 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 223
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 224 EVMDELCALYNKYKDGYATADA 245
>Medtr6g033510.9 | shikimate kinase | HC | chr6:10838781-10833894 |
20130731
Length = 274
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKS 104
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 105 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 164
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 165 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 223
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 224 EVMDELCALYNKYKDGYATADA 245
>Medtr6g033510.13 | shikimate kinase | HC | chr6:10838821-10833872 |
20130731
Length = 274
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKS 104
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 105 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 164
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 165 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 223
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 224 EVMDELCALYNKYKDGYATADA 245
>Medtr6g033510.2 | shikimate kinase | HC | chr6:10838651-10833939 |
20130731
Length = 237
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Query: 68 LPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMGSGKTTVGKIMSKVLGY 127
L ++ L S + A D L +K ++ ++ P L G I+L+GM S KT +GK ++ VL Y
Sbjct: 4 LCSAHLASVIKVAATDLSLAVKKKAADVSPELKGSSIFLIGMKSSLKTNLGKQLADVLRY 63
Query: 128 EFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMMHRHIVSTGGGAVMRPI 187
+ DSD LVEE +GG S A F E+ F D ETE L +LS M R +V G GAV
Sbjct: 64 YYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSMGRLVVCAGNGAVQNST 123
Query: 188 NWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYTRALMRLSALFEERGEA 247
N + GI+ W+D+P+E +A+ + T P +Y + L AL+ + +
Sbjct: 124 NLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYPEVMDELCALYNKYKDG 182
Query: 248 YANASA 253
YA A A
Sbjct: 183 YATADA 188
>Medtr6g033510.5 | shikimate kinase | HC | chr6:10838781-10833894 |
20130731
Length = 292
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Query: 78 RRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMGSGKTTVGKIMSKVLGYEFCDSDALVE 137
+ A D L +K ++ ++ P L G I+L+GM S KT +GK ++ VL Y + DSD LVE
Sbjct: 69 KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKSSLKTNLGKQLADVLRYYYFDSDNLVE 128
Query: 138 EEVGGNSVADIFNLYGESFFRDKETEALHKLSMMHRHIVSTGGGAVMRPINWKYMHKGIS 197
E +GG S A F E+ F D ETE L +LS M R +V G GAV N + GI+
Sbjct: 129 EAIGGASAAKSFKESDETGFYDSETEVLKQLSSMGRLVVCAGNGAVQNSTNLALLRHGIT 188
Query: 198 VWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYTRALMRLSALFEERGEAYANASA 253
W+D+P+E +A+ + T P +Y + L AL+ + + YA A A
Sbjct: 189 FWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYPEVMDELCALYNKYKDGYATADA 243
>Medtr6g033510.6 | shikimate kinase | HC | chr6:10838781-10833894 |
20130731
Length = 292
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Query: 78 RRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMGSGKTTVGKIMSKVLGYEFCDSDALVE 137
+ A D L +K ++ ++ P L G I+L+GM S KT +GK ++ VL Y + DSD LVE
Sbjct: 69 KVAATDLSLAVKKKAADVSPELKGSSIFLIGMKSSLKTNLGKQLADVLRYYYFDSDNLVE 128
Query: 138 EEVGGNSVADIFNLYGESFFRDKETEALHKLSMMHRHIVSTGGGAVMRPINWKYMHKGIS 197
E +GG S A F E+ F D ETE L +LS M R +V G GAV N + GI+
Sbjct: 129 EAIGGASAAKSFKESDETGFYDSETEVLKQLSSMGRLVVCAGNGAVQNSTNLALLRHGIT 188
Query: 198 VWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYTRALMRLSALFEERGEAYANASA 253
W+D+P+E +A+ + T P +Y + L AL+ + + YA A A
Sbjct: 189 FWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYPEVMDELCALYNKYKDGYATADA 243
>Medtr6g033510.3 | shikimate kinase | HC | chr6:10838023-10833939 |
20130731
Length = 293
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 6/202 (2%)
Query: 52 HRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILKNRSQEIQPYLNGRCIYLVGMMG 111
R R ++ V+ + +P+S + + A D L +K ++ ++ P L G I+L+GM
Sbjct: 49 FRSRRSTNSVSDAAFPVPSSVI----KVAATDLSLAVK-KAADVSPELKGSSIFLIGMKS 103
Query: 112 SGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMM 171
S KT +GK ++ VL Y + DSD LVEE +GG S A F E+ F D ETE L +LS M
Sbjct: 104 SLKTNLGKQLADVLRYYYFDSDNLVEEAIGGASAAKSFKESDETGFYDSETEVLKQLSSM 163
Query: 172 HRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYT 231
R +V G GAV N + GI+ W+D+P+E +A+ + T P +Y
Sbjct: 164 GRLVVCAGNGAVQNSTNLALLRHGITFWIDLPLEIVARDVTENPTQ-FPSFEISTSGSYP 222
Query: 232 RALMRLSALFEERGEAYANASA 253
+ L AL+ + + YA A A
Sbjct: 223 EVMDELCALYNKYKDGYATADA 244