Miyakogusa Predicted Gene

Lj0g3v0091199.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091199.2 tr|Q852R1|Q852R1_LOTJA Serine
palmitoyltransferase OS=Lotus japonicus GN=LjLCB2 PE=2
SV=1,99.15,0,PLP-dependent transferases,Pyridoxal phosphate-dependent
transferase, major domain; no description,P,CUFF.5727.2
         (237 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g033290.1 | long chain base biosynthesis 2a-like protein |...   486   e-138
Medtr3g054030.1 | long chain base biosynthesis protein 1a | HC |...    69   5e-12
Medtr5g072020.1 | long chain base biosynthesis protein 1a | HC |...    65   4e-11
Medtr1g018970.1 | long chain base biosynthesis protein 1a | HC |...    62   5e-10

>Medtr6g033290.1 | long chain base biosynthesis 2a-like protein | HC
           | chr6:10618345-10608414 | 20130731
          Length = 490

 Score =  486 bits (1252), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 228/237 (96%), Positives = 234/237 (98%)

Query: 1   MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY 60
           MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY
Sbjct: 1   MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY 60

Query: 61  LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLKRTDKLSRCLNLGSYNYLGFAASDEYC 120
           LRIQDCFGRPI+SAPDAWFDVVERYSNDNNKTLKRT K+SRCLNLGSYNYLGFAA+DEYC
Sbjct: 61  LRIQDCFGRPISSAPDAWFDVVERYSNDNNKTLKRTSKVSRCLNLGSYNYLGFAAADEYC 120

Query: 121 TPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPV 180
           TPRVID+LKKYSPSTCS RVDGGTT LHNELEECVASFV+KPAALVFGMGYVTNSAILPV
Sbjct: 121 TPRVIDTLKKYSPSTCSTRVDGGTTALHNELEECVASFVKKPAALVFGMGYVTNSAILPV 180

Query: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHR 237
           LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN+PSHLEEVLREQIAEGQPRTHR
Sbjct: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNVPSHLEEVLREQIAEGQPRTHR 237


>Medtr3g054030.1 | long chain base biosynthesis protein 1a | HC |
           chr3:21428489-21422336 | 20130731
          Length = 480

 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 7/129 (5%)

Query: 101 RCLNLGSYNYLGFAASDEY---CTPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVAS 157
             +N  S NYLG     +    CT     +L+KY   +C  R   GT D+H + E  +A 
Sbjct: 111 EVINFASANYLGLIGHQKLLDSCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAK 166

Query: 158 FVRKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMP 217
           F+R P ++++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+HN  
Sbjct: 167 FLRTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDM 226

Query: 218 SHLEEVLRE 226
             LEE L +
Sbjct: 227 DSLEETLEK 235


>Medtr5g072020.1 | long chain base biosynthesis protein 1a | HC |
           chr5:30640537-30633377 | 20130731
          Length = 480

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 7/129 (5%)

Query: 101 RCLNLGSYNYLGFAASDEY---CTPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVAS 157
             +N  S NYLG     +    CT     +L+KY   +C  R   GT D+H + E  +A 
Sbjct: 111 EVINFASANYLGLIGHQKLLDSCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAK 166

Query: 158 FVRKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMP 217
           F+  P ++++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+HN  
Sbjct: 167 FLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDM 226

Query: 218 SHLEEVLRE 226
             LEE L +
Sbjct: 227 DSLEETLEK 235


>Medtr1g018970.1 | long chain base biosynthesis protein 1a | HC |
           chr1:5618721-5624026 | 20130731
          Length = 347

 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 10/139 (7%)

Query: 101 RCLNLGSYNYLGFAASDEYCTPRVIDS----LKKYSPSTCSARVDGGTTDLHNELEECVA 156
             +N  S NYLG          +++DS    L+KY   +C  R   GT D+H + E  ++
Sbjct: 110 EVVNFASANYLGLIGHQ-----KLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEGRIS 164

Query: 157 SFVRKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNM 216
            F+  P ++++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+HN 
Sbjct: 165 KFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNN 224

Query: 217 PSHLEEVLREQIAEGQPRT 235
              L E L E I     RT
Sbjct: 225 MDSLRETL-ENITSIYKRT 242