Miyakogusa Predicted Gene

Lj0g3v0067819.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0067819.3 tr|Q17BC3|Q17BC3_AEDAE AAEL005005-PA OS=Aedes
aegypti GN=AAEL005005 PE=4 SV=1,34.41,0.0003,F-box domain,F-box
domain, cyclin-like; F-box-like,NULL; no description,NULL; seg,NULL;
CCAAT-BOX DN,CUFF.3220.3
         (147 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g017610.1 | F-box SKIP5-like protein | HC | chr3:5046951-5...   202   1e-52

>Medtr3g017610.1 | F-box SKIP5-like protein | HC |
           chr3:5046951-5042304 | 20130731
          Length = 260

 Score =  202 bits (514), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/132 (73%), Positives = 105/132 (79%), Gaps = 10/132 (7%)

Query: 1   MMEENSRDNRRQGKRWQRKRTXXXXXXXXXXXXXXHINNLDDGCLMHIFSFLPPIPDRFN 60
           M  +  +DN+ Q K+ +RKRT               INNLDDGCLMHIFSFL PIPDRFN
Sbjct: 4   MENQKQQDNKGQLKKCERKRTSCYS----------RINNLDDGCLMHIFSFLSPIPDRFN 53

Query: 61  TALVCHRWNYLACHPRLWLRVDRSVKDLSQPGVFPNIETAVSASRPGDTILIAAGGSHHT 120
           TALVCHRWNYLACHPRLWLRVDRSVKDLS+PGVFPNIETAVSASRPGDTILIAAGG H  
Sbjct: 54  TALVCHRWNYLACHPRLWLRVDRSVKDLSEPGVFPNIETAVSASRPGDTILIAAGGIHRV 113

Query: 121 SNIQIKKPLCLV 132
           +NIQI KPLCL+
Sbjct: 114 ANIQINKPLCLI 125