Miyakogusa Predicted Gene

Lj0g3v0054389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054389.1 Non Characterized Hit- tr|I3T952|I3T952_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.17,0,coiled-coil,NULL; seg,NULL; Snf7,Snf7; CHARGED
MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING
P,NODE_33197_length_914_cov_28.466084.path1.1
         (219 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g047875.1 | charged multivesicular body protein | HC | chr...   358   2e-99
Medtr1g069715.1 | cytochrome P450 family protein | LC | chr1:303...   304   5e-83
Medtr7g097170.1 | charged multivesicular body protein | HC | chr...   295   2e-80
Medtr2g041190.1 | charged multivesicular body protein | HC | chr...   137   8e-33
Medtr8g019700.1 | charged multivesicular body protein | HC | chr...   129   2e-30
Medtr4g057565.1 | vacuolar sorting-associated-like protein | HC ...    66   2e-11

>Medtr2g047875.1 | charged multivesicular body protein | HC |
           chr2:20962877-20956118 | 20130731
          Length = 216

 Score =  358 bits (919), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 183/217 (84%), Positives = 194/217 (89%), Gaps = 1/217 (0%)

Query: 3   LNIFKKKTSPKEALRSSKREMAVATRGIEKEIASLQMEERKLVAEIKRTAKTGNEAATRI 62
           +NIFKKKT+PKEALR SKREM+VATRGIE+EIASLQMEE+KLVAEIKR AKTGNEA+T+I
Sbjct: 1   MNIFKKKTTPKEALRQSKREMSVATRGIEREIASLQMEEKKLVAEIKREAKTGNEASTKI 60

Query: 63  LARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAK 122
           LARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAK
Sbjct: 61  LARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAK 120

Query: 123 QAKVIQEFQKQSAQMDMTIEMMSESIXXXXXXXXXXXXXXXXXNQVLDEIGVDIASQLSS 182
           QAKVIQEFQKQSAQ+DMTIEMMSESI                 NQVLDEIGVDIASQLSS
Sbjct: 121 QAKVIQEFQKQSAQLDMTIEMMSESIDETLDKDEAEEESEELTNQVLDEIGVDIASQLSS 180

Query: 183 APKGRIGSRSAENVAPRPAESNDVEDLEKRLASLRRI 219
           APKGRI SR+AEN APR +ES DVE+LEKRLASLRRI
Sbjct: 181 APKGRIASRNAENAAPR-SESQDVEELEKRLASLRRI 216


>Medtr1g069715.1 | cytochrome P450 family protein | LC |
           chr1:30367208-30373894 | 20130731
          Length = 677

 Score =  304 bits (778), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 152/216 (70%), Positives = 178/216 (82%), Gaps = 5/216 (2%)

Query: 2   NLNIFKKKTSPKEALRSSKREMAVATRGIEKEIASLQMEERKLVAEIKRTAKTGNEAATR 61
           NLNIF KK  PKE LR SKREMA ATRGIEKEI +LQ+EE+KLVAEIK+TAKTGNEAAT+
Sbjct: 465 NLNIFSKKPKPKEVLRESKREMANATRGIEKEIGALQLEEKKLVAEIKKTAKTGNEAATK 524

Query: 62  ILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPA 121
           ILARQLVRLRQQI NLQGSRAQ+RG+ATHTQALYA +SIS GMKGA+KAM AMNKQMAP 
Sbjct: 525 ILARQLVRLRQQIANLQGSRAQMRGIATHTQALYAQSSISAGMKGASKAMEAMNKQMAPT 584

Query: 122 KQAKVIQEFQKQSAQMDMTIEMMSESIXXXXXXXXXXXXXXXXXNQVLDEIGVDIASQLS 181
           KQAK+IQEFQKQSAQMD+T EMM+++I                 NQVLDEIGVD+ASQLS
Sbjct: 585 KQAKIIQEFQKQSAQMDITTEMMADAIDDVLDNDEAEDETEDLTNQVLDEIGVDVASQLS 644

Query: 182 SAPKGRIGSRSAENVAPRPAESNDVEDLEKRLASLR 217
           +APKG I +++ ENV+     S++++D+EKRLA+LR
Sbjct: 645 AAPKGSIKTKNTENVS-----SSEIDDIEKRLAALR 675


>Medtr7g097170.1 | charged multivesicular body protein | HC |
           chr7:39086171-39082366 | 20130731
          Length = 212

 Score =  295 bits (755), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/215 (69%), Positives = 174/215 (80%), Gaps = 5/215 (2%)

Query: 3   LNIFKKKTSPKEALRSSKREMAVATRGIEKEIASLQMEERKLVAEIKRTAKTGNEAATRI 62
           +NIF KK + KEALR SKREM  ATRGIE+EI SLQ+EE+KLVAEIKRTAKTGNE AT++
Sbjct: 1   MNIFTKKPTAKEALRESKREMTNATRGIEREIGSLQLEEKKLVAEIKRTAKTGNEGATKV 60

Query: 63  LARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAK 122
           LARQL+RLRQQI NLQGSRAQ+RG+ATHTQA++A +S++ GMKGATKAM AMNKQM PAK
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAMNKQMEPAK 120

Query: 123 QAKVIQEFQKQSAQMDMTIEMMSESIXXXXXXXXXXXXXXXXXNQVLDEIGVDIASQLSS 182
           QAKV+QEFQKQSAQMDMT EMMS+ I                 NQVLDEIG+DIASQLSS
Sbjct: 121 QAKVMQEFQKQSAQMDMTTEMMSDVIDDALDDDEAEEETEELTNQVLDEIGIDIASQLSS 180

Query: 183 APKGRIGSRSAENVAPRPAESNDVEDLEKRLASLR 217
           APKGRI +++ ENV      S+ V+DLEKRLA+LR
Sbjct: 181 APKGRIAAKNTENVG-----SSGVDDLEKRLAALR 210


>Medtr2g041190.1 | charged multivesicular body protein | HC |
           chr2:18065645-18070228 | 20130731
          Length = 223

 Score =  137 bits (345), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 133/220 (60%), Gaps = 5/220 (2%)

Query: 5   IFKKKTSPKEALRSSKREMAVATRGIEKEIASLQMEERKLVAEIKRTAKTGNEAATRILA 64
           IF K+ +P E LR +KR +  + R IE+E   LQ +E+KL+AEIK++AK G   A R++A
Sbjct: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMA 63

Query: 65  RQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQA 124
           + LVR R QI      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+QM      
Sbjct: 64  KDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPNLQ 123

Query: 125 KVIQEFQKQSAQMDMTIEMMSESIXXXXXXXXXXXXXXXXXNQVLDEIGVDIASQLSSAP 184
           K++Q+F++Q+ +M++T+E+M ++I                 NQVLDEIG+DI  +L +AP
Sbjct: 124 KIMQDFERQNEKMELTMEVMGDAIDDALEGDEEEEETDELVNQVLDEIGIDINQELVNAP 183

Query: 185 KGRIGSRSAENVAPR--PAESNDV---EDLEKRLASLRRI 219
              + + +A+   P+   A ++D     DL+ RL +LR++
Sbjct: 184 SSAVAAPAAKTKVPQAETAATDDSGIDSDLQARLDNLRKM 223


>Medtr8g019700.1 | charged multivesicular body protein | HC |
           chr8:7006345-7009232 | 20130731
          Length = 224

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 105/176 (59%)

Query: 5   IFKKKTSPKEALRSSKREMAVATRGIEKEIASLQMEERKLVAEIKRTAKTGNEAATRILA 64
           +F  + +P E LR +KR +  + R IE+E   LQ +E+KL+ EIK+ AK G   A R++A
Sbjct: 4   LFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIGEIKKNAKQGQMGAVRVMA 63

Query: 65  RQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQA 124
           + L+R R QI      ++Q++GVA   Q L ++ ++   MKG TKAM  MN+QM      
Sbjct: 64  KDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGDAMKGVTKAMGQMNRQMNLPSLQ 123

Query: 125 KVIQEFQKQSAQMDMTIEMMSESIXXXXXXXXXXXXXXXXXNQVLDEIGVDIASQL 180
           K++QEF++Q+ +M++  E+M ++I                 NQVLDEIG+DI S+L
Sbjct: 124 KIMQEFERQNEKMELVSEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINSEL 179


>Medtr4g057565.1 | vacuolar sorting-associated-like protein | HC |
           chr4:21106196-21110863 | 20130731
          Length = 227

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 89/181 (49%)

Query: 3   LNIFKKKTSPKEALRSSKREMAVATRGIEKEIASLQMEERKLVAEIKRTAKTGNEAATRI 62
           +NI K K +P++ LR  +R++    R IE++I  +Q EE+ +   IK  AK  +  + + 
Sbjct: 5   MNILKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKEAAKRNDIGSAKA 64

Query: 63  LARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAK 122
           LA +LVR R+ +  L  ++AQ+  ++ H     A       +  + + M  +N  M   +
Sbjct: 65  LATELVRSRKTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPE 124

Query: 123 QAKVIQEFQKQSAQMDMTIEMMSESIXXXXXXXXXXXXXXXXXNQVLDEIGVDIASQLSS 182
            A  +QEF K+  +  +  E++++++                 ++VL E+  + A+QL  
Sbjct: 125 MAVAMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEDEIDEEVDKVLTELAGETAAQLPE 184

Query: 183 A 183
           A
Sbjct: 185 A 185