Miyakogusa Predicted Gene

Lj0g3v0035899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0035899.1 tr|B0ZC71|B0ZC71_ARATH At1g67140 (Fragment)
OS=Arabidopsis thaliana PE=4 SV=1,44.38,2e-18, ,CUFF.1577.1
         (269 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g406950.1 | HEAT repeat 5B-like protein | HC | chr7:990593...   387   e-108

>Medtr7g406950.1 | HEAT repeat 5B-like protein | HC |
            chr7:990593-1022109 | 20130731
          Length = 2481

 Score =  387 bits (993), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/265 (76%), Positives = 230/265 (86%)

Query: 1    MQVQVIGLQFLKARIQRGVNTEDNSFFMFLVGELISDIFTFIHRMLKNTITRESVNIASE 60
            MQVQVIGLQFLKARIQRGVNTEDNSF MFL GELI+DIFT IH+MLK  ITRESVNIASE
Sbjct: 1816 MQVQVIGLQFLKARIQRGVNTEDNSFLMFLAGELITDIFTLIHKMLKKNITRESVNIASE 1875

Query: 61   CLSLMVLLQTLSKDNDCQRSFMNLLLEAIVMIFLSTGDGFSQDVSDLRSTAIKLVSRLAQ 120
            CLSLMV+LQTL+K NDCQRSFM LLLEAIV IFLST DGFS ++ DLRSTAIKLVS LAQ
Sbjct: 1876 CLSLMVVLQTLAKGNDCQRSFMTLLLEAIVTIFLSTTDGFSPEIRDLRSTAIKLVSHLAQ 1935

Query: 121  IPSSANHFKDVLLSMPPLYRQQLQGVIRASVTQDKNPLELKVPVLDIKMPQSSGQNEEKH 180
            IPSSA HFKDVLLSMPPL+RQ+LQGVIRASVT DKN  E KVPVLDIKMP+ + +NEEKH
Sbjct: 1936 IPSSAMHFKDVLLSMPPLHRQELQGVIRASVTNDKNQTEHKVPVLDIKMPKPAVRNEEKH 1995

Query: 181  TVSSAPVMRTDENDKEEDEVSEDDWDAFQSFPVSKTEDGDESRIEHAAEGKDPSLVESSS 240
               SA V+++DEN++EEDE SEDDWDAFQSFPVSK E GDES+ EH+ + KDPS+VESSS
Sbjct: 1996 PTPSAAVVQSDENNEEEDEFSEDDWDAFQSFPVSKNEGGDESKTEHSDKDKDPSMVESSS 2055

Query: 241  DREGSIVSVEFQESSVLKSLNREKD 265
            D +GS   VEFQES++ KS++ EK+
Sbjct: 2056 DLDGSTGDVEFQESAISKSISSEKE 2080