Miyakogusa Predicted Gene

Lj0g3v0020889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0020889.1 Non Characterized Hit- tr|A5ARB7|A5ARB7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52.44,3e-17,VC0467-like,NULL; seg,NULL; DUF179,Protein of unknown
function DUF179; no description,NULL;
SUBFAMIL,NODE_35459_length_253_cov_155.968384.path1.1
         (86 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g011850.1 | plant/MXO21-9 protein | HC | chr7:3281753-3284...   135   1e-32
Medtr3g005140.1 | electron transporter, putative | HC | chr3:786...    73   5e-14
Medtr3g005140.2 | electron transporter, putative | HC | chr3:788...    73   5e-14

>Medtr7g011850.1 | plant/MXO21-9 protein | HC | chr7:3281753-3284321
           | 20130731
          Length = 291

 Score =  135 bits (339), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/86 (72%), Positives = 67/86 (77%)

Query: 1   MKGLYYGAKESVGCASEMVKRDVVGLGDFRFFDGYCGWEKEQLKDEIRAGYWTVAACXXX 60
           MKGLYYG KESVG A+EMVKR+VV +GDFRFFDGYCGWEKEQL+DEIR GYWTVAAC   
Sbjct: 206 MKGLYYGTKESVGLAAEMVKRNVVEVGDFRFFDGYCGWEKEQLRDEIRDGYWTVAACSPS 265

Query: 61  XXXXXXXXXXXXWDEVLGLMGRRKVK 86
                       WDEVLGLMG+RKVK
Sbjct: 266 VVDLGNVGIVGLWDEVLGLMGKRKVK 291


>Medtr3g005140.1 | electron transporter, putative | HC |
           chr3:78652-81355 | 20130731
          Length = 322

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 3   GLYYGAKESVGCASEMVKRDVVGLGDFRFFDGYCGWEKEQLKDEIRAGYWTVAACXXXXX 62
           GLYYGA+  +  A+ +VK+ ++   DF FF GY GW+ +QL+DEI + YW VAAC     
Sbjct: 240 GLYYGARNCLDDAAGLVKKGIIKPHDFSFFVGYAGWQMDQLRDEIESEYWYVAACSSSLL 299

Query: 63  XXXXX-XXXXXWDEVLGLMG 81
                      W+E+L LMG
Sbjct: 300 YKALTDSSEGLWEEILQLMG 319


>Medtr3g005140.2 | electron transporter, putative | HC |
           chr3:78869-81355 | 20130731
          Length = 322

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 3   GLYYGAKESVGCASEMVKRDVVGLGDFRFFDGYCGWEKEQLKDEIRAGYWTVAACXXXXX 62
           GLYYGA+  +  A+ +VK+ ++   DF FF GY GW+ +QL+DEI + YW VAAC     
Sbjct: 240 GLYYGARNCLDDAAGLVKKGIIKPHDFSFFVGYAGWQMDQLRDEIESEYWYVAACSSSLL 299

Query: 63  XXXXX-XXXXXWDEVLGLMG 81
                      W+E+L LMG
Sbjct: 300 YKALTDSSEGLWEEILQLMG 319