Miyakogusa Predicted Gene

Lj0g3v0020549.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0020549.1 tr|Q0INP5|Q0INP5_ORYSJ Os12g0416500 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os12g04165,55.06,4e-19,SUBFAMILY NOT NAMED,NULL; GCN5-RELATED,NULL;
GCN5L1,GCN5-like 1,NODE_60627_length_875_cov_17.096001.path1.1
         (135 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g074880.1 | GCN5-like protein 1 (GCN5L1) protein | HC | ch...   221   1e-58

>Medtr5g074880.1 | GCN5-like protein 1 (GCN5L1) protein | HC |
           chr5:31813005-31809376 | 20130731
          Length = 135

 Score =  221 bits (564), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 109/135 (80%), Positives = 118/135 (87%)

Query: 1   MEKNDVGITTEPKGLEASLHNLLQIHHHKSLILAHHTEKAKKDAMRKAERVSDLLVEAVN 60
           ME+ +V   T+ KGLE SL NL+ IHHHKSLIL + TEKAKKDA+RKAERVSDLLVEAVN
Sbjct: 1   MEERNVNTHTDSKGLEGSLQNLIHIHHHKSLILTNQTEKAKKDAIRKAERVSDLLVEAVN 60

Query: 61  GGVQDSFVNQKRIEHEIRALAVTITRFMKQTDQWLAATHSLNTALKEIGDFENWMKIMEY 120
           GGVQDSF+ QKRIE EIRALAVTI RF+KQ+DQWL ATHSLNTALKEIGDFENWMKIMEY
Sbjct: 61  GGVQDSFIYQKRIELEIRALAVTIARFVKQSDQWLNATHSLNTALKEIGDFENWMKIMEY 120

Query: 121 DCKSITTAIQNIHQE 135
           D KSI  AIQNIHQE
Sbjct: 121 DFKSINAAIQNIHQE 135