Miyakogusa Predicted Gene

Lj6g3v2218320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2218320.1 Non Chatacterized Hit- tr|I1MDW7|I1MDW7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,66.67,2e-19,HMA,
heavy metal-associated domain,Heavy metal-associated domain, HMA;
HMA_2,Heavy metal-associated
,NODE_50441_length_577_cov_46.237434.path2.1
         (69 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33520.1 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:1611...   100   4e-22
AT4G33520.2 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:1611...    98   1e-21
AT4G33520.3 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:1611...    98   1e-21

>AT4G33520.1 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 |
           chr4:16118993-16120542 FORWARD LENGTH=237
          Length = 237

 Score = 99.8 bits (247), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 55/69 (79%)

Query: 1   MMCEGCADNVKKLLQSRPQVSSASVNLASEIAIVYPASEEKTAPDWQKQLGEALAEHLTN 60
           M C GC+ +VKK+L+S+PQV+SASVNL +E AIV+P  E K+ PDWQK LGE LA HLTN
Sbjct: 157 MTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTN 216

Query: 61  CGFSSSLQG 69
           CGF S+ +G
Sbjct: 217 CGFQSTPRG 225


>AT4G33520.2 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 |
           chr4:16118993-16125849 FORWARD LENGTH=949
          Length = 949

 Score = 98.2 bits (243), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 53/66 (80%)

Query: 1   MMCEGCADNVKKLLQSRPQVSSASVNLASEIAIVYPASEEKTAPDWQKQLGEALAEHLTN 60
           M C GC+ +VKK+L+S+PQV+SASVNL +E AIV+P  E K+ PDWQK LGE LA HLTN
Sbjct: 157 MTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTN 216

Query: 61  CGFSSS 66
           CGF S+
Sbjct: 217 CGFQST 222


>AT4G33520.3 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 |
           chr4:16118993-16125849 FORWARD LENGTH=949
          Length = 949

 Score = 98.2 bits (243), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 53/66 (80%)

Query: 1   MMCEGCADNVKKLLQSRPQVSSASVNLASEIAIVYPASEEKTAPDWQKQLGEALAEHLTN 60
           M C GC+ +VKK+L+S+PQV+SASVNL +E AIV+P  E K+ PDWQK LGE LA HLTN
Sbjct: 157 MTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTN 216

Query: 61  CGFSSS 66
           CGF S+
Sbjct: 217 CGFQST 222