Miyakogusa Predicted Gene

Lj6g3v2145470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2145470.1 Non Chatacterized Hit- tr|I3T2K9|I3T2K9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,72.12,0,NOT-MenG:
RraA family,Regulator of ribonuclease activity A;
Methyltransf_6,Ribonuclease E inhibitor ,CUFF.60709.1
         (168 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56260.1 | Symbols:  | Ribonuclease E inhibitor RraA/Dimethyl...   215   1e-56
AT5G16450.2 | Symbols:  | Ribonuclease E inhibitor RraA/Dimethyl...   196   4e-51
AT5G16450.1 | Symbols:  | Ribonuclease E inhibitor RraA/Dimethyl...   196   4e-51
AT3G02770.1 | Symbols:  | Ribonuclease E inhibitor RraA/Dimethyl...   193   4e-50

>AT5G56260.1 | Symbols:  | Ribonuclease E inhibitor
           RraA/Dimethylmenaquinone methyltransferase |
           chr5:22775549-22776049 REVERSE LENGTH=166
          Length = 166

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 103/165 (62%), Positives = 133/165 (80%), Gaps = 1/165 (0%)

Query: 1   MGGLAIADICDVNTEKIASGEVRILDPVFQSYGQARTFSGPIVTVKVFEDNVLIKEVLQT 60
           M   A A+ CD N E I++G++R L P+F+ YGQ R FSGPIVT+KVFEDNVL++  L+T
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 61  KGEGKILVIDGGGSMRRALIGGHLVELAHSNGWAGIVVNGCVRDVDDIYECGNIGVMALG 120
           KGEG +LVIDGGGSMR AL+GG+L +LA +NGW+GIVVNGCVRDVD+I +C ++GV ALG
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDC-DVGVRALG 119

Query: 121 SYPLRPGKKGTGKKHVPVHVAGATIHEGEWLYADNDGGLVSKFQI 165
           S PL+  KKG G+K+VPVH+ G  I +GEWLYAD+DG L+SK ++
Sbjct: 120 SNPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTEL 164


>AT5G16450.2 | Symbols:  | Ribonuclease E inhibitor
           RraA/Dimethylmenaquinone methyltransferase |
           chr5:5374357-5375342 FORWARD LENGTH=166
          Length = 166

 Score =  196 bits (499), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 127/165 (76%), Gaps = 1/165 (0%)

Query: 1   MGGLAIADICDVNTEKIASGEVRILDPVFQSYGQARTFSGPIVTVKVFEDNVLIKEVLQT 60
           M  +  A++CD N E I SG++R L P+FQ YG+ + FSGP+VTVKVFEDN LI++ ++ 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGKILVIDGGGSMRRALIGGHLVELAHSNGWAGIVVNGCVRDVDDIYECGNIGVMALG 120
           KG G++LV+DGGGS R A++GG+ V  A +NGWAGIVVNGC+RDVD+I  C +IGV AL 
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGC-DIGVRALA 119

Query: 121 SYPLRPGKKGTGKKHVPVHVAGATIHEGEWLYADNDGGLVSKFQI 165
           S+P++  KKG G++ VPV++AG  I +GEWLYAD DG LVS+ ++
Sbjct: 120 SHPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIEL 164


>AT5G16450.1 | Symbols:  | Ribonuclease E inhibitor
           RraA/Dimethylmenaquinone methyltransferase |
           chr5:5374357-5375342 FORWARD LENGTH=166
          Length = 166

 Score =  196 bits (499), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 127/165 (76%), Gaps = 1/165 (0%)

Query: 1   MGGLAIADICDVNTEKIASGEVRILDPVFQSYGQARTFSGPIVTVKVFEDNVLIKEVLQT 60
           M  +  A++CD N E I SG++R L P+FQ YG+ + FSGP+VTVKVFEDN LI++ ++ 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGKILVIDGGGSMRRALIGGHLVELAHSNGWAGIVVNGCVRDVDDIYECGNIGVMALG 120
           KG G++LV+DGGGS R A++GG+ V  A +NGWAGIVVNGC+RDVD+I  C +IGV AL 
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGC-DIGVRALA 119

Query: 121 SYPLRPGKKGTGKKHVPVHVAGATIHEGEWLYADNDGGLVSKFQI 165
           S+P++  KKG G++ VPV++AG  I +GEWLYAD DG LVS+ ++
Sbjct: 120 SHPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIEL 164


>AT3G02770.1 | Symbols:  | Ribonuclease E inhibitor
           RraA/Dimethylmenaquinone methyltransferase |
           chr3:601017-601884 REVERSE LENGTH=166
          Length = 166

 Score =  193 bits (491), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 92/165 (55%), Positives = 126/165 (76%), Gaps = 1/165 (0%)

Query: 1   MGGLAIADICDVNTEKIASGEVRILDPVFQSYGQARTFSGPIVTVKVFEDNVLIKEVLQT 60
           M  +  A++CD N E I SG++R L PVFQ YG+ + FSGP+VTVKVFEDN LI+  L+ 
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 61  KGEGKILVIDGGGSMRRALIGGHLVELAHSNGWAGIVVNGCVRDVDDIYECGNIGVMALG 120
           KG G++LV+DGGGS+R A++GG+ V  A +NGWAGI+VNGC+RDVD+I  C +IGV AL 
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGC-DIGVRALA 119

Query: 121 SYPLRPGKKGTGKKHVPVHVAGATIHEGEWLYADNDGGLVSKFQI 165
           S+P++  KKG G++ V +++AG  I +GEWLYAD DG LVS+ ++
Sbjct: 120 SHPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIEL 164