Miyakogusa Predicted Gene

Lj6g3v1827400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1827400.1 Non Chatacterized Hit- tr|B7PBX7|B7PBX7_IXOSC
Putative uncharacterized protein OS=Ixodes scapularis
,33.91,5e-19,PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2
(MPV17),Mpv17/PMP22; Mpv17_PMP22,Mpv17/PMP22; seg,NULL,CUFF.59997.1
         (190 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G04470.1 | Symbols: PMP22 | Peroxisomal membrane 22 kDa (Mpv1...   239   7e-64
AT4G14305.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...   233   5e-62
AT4G14305.2 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...   201   2e-52
AT5G43140.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    68   3e-12
AT5G19750.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    63   1e-10
AT3G24570.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    54   5e-08
AT2G14860.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    49   2e-06
AT4G33905.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP...    49   3e-06

>AT4G04470.1 | Symbols: PMP22 | Peroxisomal membrane 22 kDa
           (Mpv17/PMP22) family protein | chr4:2227963-2229226
           REVERSE LENGTH=190
          Length = 190

 Score =  239 bits (611), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 116/192 (60%), Positives = 144/192 (75%), Gaps = 5/192 (2%)

Query: 1   MGSV--AKNGLNNYVKQLQQHPLRTKVITAGVLSGISDIVSQKLTGIQRLQFKRLLLKVI 58
           MGS    K  L  Y+ QLQQHPLRTK ITAGVLSG+SD+VSQKL+GIQ++Q +R+LLKVI
Sbjct: 1   MGSSPPKKTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVI 60

Query: 59  FGAAYLGPFGHFFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGR 118
           F   +LGP GHFFH  LDK F             ++EQLT SP N+LLF+IYYG+V+E  
Sbjct: 61  FAGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERT 120

Query: 119 PWVHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRAR 178
           PW  V+ ++KK YP+VQ T+WTF+PVVGWIN+K++PLHFRV+ HS +AF WGIFL LRAR
Sbjct: 121 PWTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRAR 180

Query: 179 SMVPRSVALTKA 190
           SM   ++AL KA
Sbjct: 181 SM---TLALAKA 189


>AT4G14305.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr4:8235335-8236605 REVERSE LENGTH=185
          Length = 185

 Score =  233 bits (595), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 106/185 (57%), Positives = 140/185 (75%)

Query: 1   MGSVAKNGLNNYVKQLQQHPLRTKVITAGVLSGISDIVSQKLTGIQRLQFKRLLLKVIFG 60
           M  +AK+    Y+ QLQ HPLRTK ITAGVL+G SD ++QK++G++R+QF+RLLL +++G
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  AAYLGPFGHFFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPW 120
            AY GPFGHFFH ++D IF             L+EQLTSSPWNN LF+ YYGLVVEGRPW
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 121 VHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRARSM 180
             VK K+ KDYP++Q T+W FWP+VGW+N++++PL FRV+F SF+A  W IFLNL+ARS 
Sbjct: 121 KLVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKARSP 180

Query: 181 VPRSV 185
           V ++ 
Sbjct: 181 VIKNA 185


>AT4G14305.2 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr4:8235335-8236582 REVERSE LENGTH=173
          Length = 173

 Score =  201 bits (511), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 121/157 (77%)

Query: 29  GVLSGISDIVSQKLTGIQRLQFKRLLLKVIFGAAYLGPFGHFFHIMLDKIFXXXXXXXXX 88
           GVL+G SD ++QK++G++R+QF+RLLL +++G AY GPFGHFFH ++D IF         
Sbjct: 17  GVLAGCSDAIAQKISGVKRIQFRRLLLLMLYGFAYGGPFGHFFHKLMDTIFKGKKGNSTV 76

Query: 89  XXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPWVHVKAKVKKDYPSVQYTSWTFWPVVGWI 148
               L+EQLTSSPWNN LF+ YYGLVVEGRPW  VK K+ KDYP++Q T+W FWP+VGW+
Sbjct: 77  AKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGKDYPTIQLTAWKFWPIVGWV 136

Query: 149 NHKFMPLHFRVVFHSFIAFGWGIFLNLRARSMVPRSV 185
           N++++PL FRV+F SF+A  W IFLNL+ARS V ++ 
Sbjct: 137 NYQYVPLQFRVLFSSFVASCWSIFLNLKARSPVIKNA 173


>AT5G43140.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr5:17321570-17323224 FORWARD
           LENGTH=254
          Length = 254

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 4/168 (2%)

Query: 12  YVKQLQQHPLRTKVITAGVLSGISDIVSQKLTGIQRLQFK--RLLLKVIFGAAYLGPFGH 69
           Y+++L+ HP  TK IT  V+   +D+ SQ +T      F   R      FG  +LGP  H
Sbjct: 82  YLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGPSQH 141

Query: 70  FFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPWVHVKAKVKK 129
            +   L KI              ++ Q+   P +N +F   Y   ++G     + A++K+
Sbjct: 142 LWFSYLSKILPKRDVLTTFKKI-MMGQVLFGPVSNTVFY-SYNAALQGENSEEIVARLKR 199

Query: 130 DYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRA 177
           D          +WPV  ++  K++P+H + + +S  A+ W I+L   A
Sbjct: 200 DLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMA 247


>AT5G19750.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr5:6677124-6679127 FORWARD LENGTH=288
          Length = 288

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 4/171 (2%)

Query: 12  YVKQLQQHPLRTKVITAGVLSGISDIVSQ-KLTGIQRLQFKRLLLKVIFGAAYLGPFGHF 70
           Y   L   P+ TK +TA +L+ + D++ Q  +     L  KR L     G   +GP  HF
Sbjct: 118 YQALLSNSPVLTKAVTAALLNLVGDLICQLTINKTSSLDKKRTLTFTFLGLGLVGPTLHF 177

Query: 71  FHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPWVHVKAKVKKD 130
           +++ L K+              L++Q   +P    +FL    + +EG+P  +V  K++++
Sbjct: 178 WYLYLSKV-VTASGLSGAVIRLLLDQFVFAPIFVGVFLSAV-VTLEGKP-SNVIPKLQQE 234

Query: 131 YPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRARSMV 181
           +      +W  W    ++N +F+P +++V+  + +A  W + L+ +A   V
Sbjct: 235 WTGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVVALAWNVILSFKAHKEV 285


>AT3G24570.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr3:8966675-8968530 REVERSE LENGTH=235
          Length = 235

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 37/186 (19%)

Query: 12  YVKQLQQHPLRTKVITAGVLSGISDIVSQKLT---GIQRL-------------------- 48
           Y + L  HP++T+VI++G L G  D+ +Q +T     +RL                    
Sbjct: 8   YQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVKW 67

Query: 49  --------QFKRLLLKVIFGAAYLGPFGHFFHIMLDKIFXXX-----XXXXXXXXXXLIE 95
                    +KR+ +  +FG  ++GP GHF++  LDK                     ++
Sbjct: 68  KQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMD 127

Query: 96  QLTSSPWNNLLFLIYYGLVVEGRPWVHVKAKVKKDYPSVQYTSWTFWPVVGWINHKFMPL 155
            L   P + L+F  Y G    G+    VK  +K+D+          WP++   N +++P+
Sbjct: 128 GLIFGPVDLLVFFTYMGFAT-GKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPV 186

Query: 156 HFRVVF 161
            +++++
Sbjct: 187 QYQLLY 192


>AT2G14860.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr2:6387820-6389563 REVERSE LENGTH=252
          Length = 252

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/179 (18%), Positives = 82/179 (45%), Gaps = 8/179 (4%)

Query: 12  YVKQLQQHPLRTKVITAGVLSGISDIVSQKL--TGIQRLQFKRLLLKVIFGAAYLGPFGH 69
           Y+  ++ HP+ TK +T+ ++   +D+ SQ +  T  +     R      +G   LGP  H
Sbjct: 77  YLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLH 136

Query: 70  FFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGL--VVEGRPWVHVKAKV 127
           ++   + ++F             + + +    +  ++ +I++ L   ++G     + A++
Sbjct: 137 YWFNFMSRLFPKQDLITTFKKMAMGQTI----YGPIMTVIFFSLNASLQGERGSVILARL 192

Query: 128 KKDYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRARSMVPRSVA 186
           K+D     +    +WP+  +I  +F P+H + +  +  ++ W I++   A    P +++
Sbjct: 193 KRDLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANREKPVAIS 251


>AT4G33905.1 | Symbols:  | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
           family protein | chr4:16254065-16255592 REVERSE
           LENGTH=261
          Length = 261

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/178 (17%), Positives = 75/178 (42%), Gaps = 4/178 (2%)

Query: 12  YVKQLQQHPLRTKVITAGVLSGISDIVSQKL--TGIQRLQFKRLLLKVIFGAAYLGPFGH 69
           Y+  ++  P+ TK +T+ ++   +D+ SQ +    +      R      +G   LGP  H
Sbjct: 86  YLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILGPTLH 145

Query: 70  FFHIMLDKIFXXXXXXXXXXXXXLIEQLTSSPWNNLLFLIYYGLVVEGRPWVHVKAKVKK 129
           ++  ++  +F             + + +     N + F +   L  +G     + A++K+
Sbjct: 146 YWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAAL--QGENGSEIVARLKR 203

Query: 130 DYPSVQYTSWTFWPVVGWINHKFMPLHFRVVFHSFIAFGWGIFLNLRARSMVPRSVAL 187
           D          +WP+  +I  KF P++ + +  +  ++ W I++   A    P ++ +
Sbjct: 204 DLLPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLWTIYITYMASRATPTAIEI 261