Miyakogusa Predicted Gene
- Lj6g3v1559380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1559380.1 Non Chatacterized Hit- tr|I1L0S3|I1L0S3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.82,0,WD40
repeats,WD40 repeat; WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain;,CUFF.59617.1
(1727 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G49430.1 | Symbols: | WD40/YVTN repeat-like-containing domai... 1693 0.0
AT2G47410.1 | Symbols: | WD40/YVTN repeat-like-containing domai... 1193 0.0
AT2G47410.2 | Symbols: | WD40/YVTN repeat-like-containing domai... 1191 0.0
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 69 3e-11
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 67 1e-10
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 64 1e-09
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 63 2e-09
AT1G79990.3 | Symbols: | structural molecules | chr1:30085910-3... 62 3e-09
AT1G79990.5 | Symbols: | structural molecules | chr1:30085910-3... 62 3e-09
AT1G52360.1 | Symbols: | Coatomer, beta' subunit | chr1:1949928... 62 4e-09
AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protei... 62 4e-09
AT3G15980.3 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 62 5e-09
AT3G15980.2 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 62 5e-09
AT3G15980.5 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 62 5e-09
AT3G15980.4 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 61 6e-09
AT3G15980.1 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 61 6e-09
AT1G52360.2 | Symbols: | Coatomer, beta' subunit | chr1:1949942... 61 7e-09
AT1G79990.1 | Symbols: | structural molecules | chr1:30084522-3... 60 9e-09
AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 60 2e-08
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 59 4e-08
AT5G50230.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 8e-08
AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 | c... 57 9e-08
AT2G21390.1 | Symbols: | Coatomer, alpha subunit | chr2:9152428... 56 2e-07
AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA ... 55 6e-07
AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA ... 55 6e-07
AT3G18950.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 55 6e-07
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 7e-07
AT1G62020.1 | Symbols: | Coatomer, alpha subunit | chr1:2291981... 54 1e-06
AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 3e-06
AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40 ... 52 3e-06
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 3e-06
AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 4e-06
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 8e-06
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 8e-06
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 9e-06
AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein | chr... 51 9e-06
AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / S... 51 9e-06
>AT5G49430.1 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr5:20037338-20045454 REVERSE
LENGTH=1677
Length = 1677
Score = 1693 bits (4385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 953/1755 (54%), Positives = 1161/1755 (66%), Gaps = 110/1755 (6%)
Query: 5 MALQKYVPSGDAPTVNMKRLSFSTKGAEKTQLNVAN--QNHNMNVDVDLREVYFLILHFL 62
MAL+K P GD+ ++ MK L+FS K Q+ + Q+ N+D+DLREVYFL+LH L
Sbjct: 1 MALRKNTPKGDSVSLPMKPLNFSRKLPGNVQIPDPDIVQSVAPNIDLDLREVYFLMLHLL 60
Query: 63 SAGPCHKTCLQFWNELLEHELLPRRYHSWYSRSGACSGNADDDGLSFPLSYDKLVERYPH 122
S+GPC KT +ELLEHELLPRRYH+WYSRSG SG+ +DDG SFPL+Y +L +RY H
Sbjct: 61 SSGPCQKTYALLRHELLEHELLPRRYHAWYSRSGLPSGDENDDGNSFPLNYTELAKRYSH 120
Query: 123 IEKDHLVKLLKQLL---NTASPSLGMSTRNAPNAADVPTLLGRGSFSLLSYDRDKMNEEA 179
++KDHLV+LLKQL+ N +PS G+ N A VPTLLG GSFSLLS D++ + +
Sbjct: 121 VKKDHLVELLKQLVFVSNRPNPSRGIGDGNKMIGAGVPTLLGTGSFSLLSSDKEIVGSDL 180
Query: 180 KRPAAYMRWPHMKANQVHGLNLREIGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKR 239
K P MRWPHM A+QV G++LREIGGGF RHHRAPSIRAACY IAKPS+MVQKMQNIKR
Sbjct: 181 KPPPIGMRWPHMHADQVRGISLREIGGGFARHHRAPSIRAACYVIAKPSSMVQKMQNIKR 240
Query: 240 TRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXX 299
RGHRNAVYCAILDRSGRYVITGSDDRLVK+WSM+TAYCLASCRGH+GDITD
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 300 XXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 359
DCVIRVWRLPDGLP+S+LRGHTGAVTAIAFSPRP + YQLLSSSDDGTCRIWD
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
Query: 360 ARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARV- 418
AR Q PR+YVPR HQIFCCAFNA+G+VFVTGSSD LARV
Sbjct: 361 ARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFCCAFNASGSVFVTGSSDTLARVY 420
Query: 419 --WNACKFSVDDADQPNHELDMQSGNENDVNYVQFSGCAVASRFSAAETLKEENIPKFKN 476
W+A K + DD +QPNHE+D+ +G+ENDVNYVQFSGCA S+FS + K+EN+PKFKN
Sbjct: 421 SVWSANKTNTDDPEQPNHEMDVLAGHENDVNYVQFSGCAAGSKFSVTDYSKDENVPKFKN 480
Query: 477 SWLNHENIVTCSRDGRAIIWIPKSRRAHGKSGRWTRAYHLRVXXXXXXXXXXXXXXXXXI 536
SW H+NIVTCSRDG AIIWIP+ RR+HGKS RWTRAYHL+V I
Sbjct: 481 SWFCHDNIVTCSRDGSAIIWIPRLRRSHGKSCRWTRAYHLKVPPPPMPPQPPRGGPRQRI 540
Query: 537 LPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVQPFNPR 596
LPTPRGVNMI WSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHT STYV+DV PFNPR
Sbjct: 541 LPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPR 600
Query: 597 SAMSAGYDGRTIVWDIWEGKPIRIYEISHFKLVDGKFSPDGTSIILSDDVGQLYILSTGQ 656
AMSAGYDG+TIVWDIWEG PI+IY+ISH+KLVDGKFSPDGTSIILSDDVGQLYILSTGQ
Sbjct: 601 IAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILSDDVGQLYILSTGQ 660
Query: 657 GESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQIVPYRRNLQDLLCDSALIPYPEPYQT 716
G+SQKDAKYDQFFLGDYRPLIQDT+GNVLDQE+Q+ PYRRN++D LCDS +IPY EPYQT
Sbjct: 661 GDSQKDAKYDQFFLGDYRPLIQDTYGNVLDQESQLQPYRRNMEDPLCDSGMIPYEEPYQT 720
Query: 717 EFQQRRLGALGLEWRPSSLRLAVGPDFSLDPDFHMLPLADLDVLTEPLPEFIDAMDWEPE 776
FQ+RRLGALG EWRPSSL+LAVGPD +LD D+ M PLADLD L EPLPEFID M+WEPE
Sbjct: 721 TFQKRRLGALGKEWRPSSLKLAVGPDITLDRDYQMPPLADLD-LAEPLPEFIDVMEWEPE 779
Query: 777 IEVFSDDADSEYNFTEDXXXXXXXXXXXXXXXXXXXXXTDNSEEEDIHMDSIRRSKRKKQ 836
+++ SD+ DSEYN E+ + S E+D H +S+RRSKRKK
Sbjct: 780 VDILSDENDSEYNVPEEYSSGKEQECLNSSTSGESGSSSGESYEDDDHQNSLRRSKRKKH 839
Query: 837 KNETEIMTSSGRRVKRRNLDECDGNTFSSNRNRKGKSVKKTSRSKYSNTKSSRPQRAAAR 896
K E IMTSSGRRVK+RN DE +G + R RK +S +K S+ K S +KSSRP+RAAAR
Sbjct: 840 KKEAGIMTSSGRRVKKRNFDELEGAPSNKKRTRKSRSGRKESKRKSSKSKSSRPRRAAAR 899
Query: 897 NALHLFSKITGAPTDG--EEDSLLGDFSDSESTLQESNIDSDESGRASQNDQLNCSKGKE 954
NAL FSKITG D EE S L D S+SEST Q+S E A N SKGK
Sbjct: 900 NALSWFSKITGTSKDAEEEEVSELSDSSESESTTQDSGTGDSELEVALLNGHGKQSKGKT 959
Query: 955 VLLSESQD-TKSHELTETHVNAVNRRRLVLKFPIRDSSQPMHEFDKQDGLVGSSSKTADL 1013
+L+ +S D + ++ ETH RRRLVL+FP+R+S + + L GSS
Sbjct: 960 ILVCDSDDGAQQCDIRETHT--AERRRLVLRFPVRNSDK----LTLLENLPGSSCDV--- 1010
Query: 1014 SRNRPSSQDPEYYFGNGSNETIERNHQLNLGQEADDVDLLGKIRWGVVRPRSSKLLRVRE 1073
P GNG E G + + +D + K++WG+V+ R++K +R E
Sbjct: 1011 ---------PSPTLGNGCTEDSRIP-----GNQFEGLD-VSKVKWGMVKARTTKRIR-GE 1054
Query: 1074 AVPS--------EANANSVKCPNQLDEKENGGTGLEKENKDFSTSTLALEIQNDDDKVDN 1125
A+ S E N+VK ++ + G G+ T+ LE++ D +D+
Sbjct: 1055 AISSHELMGSDPEGKENNVK-----EDSNHRGNGV--------TAPSCLELKTD---IDD 1098
Query: 1126 LTDNSGNCVSTSSQLFNPAENGEVLTASSNCRDKDESLVNASMIPQDTIPAFVTHEADQL 1185
+ ++ +S L N + L S + R D+ N+S VTH D +
Sbjct: 1099 MAVDTDTVISNG--LPNGGKRYPELDGSPS-RVADDKASNSSQ--------NVTHRHDLI 1147
Query: 1186 PEPNIGFPSVST--KLRSKRGSRDGESPSKHETKSSVLKNSACSTNADNNLNNEHHIVVV 1243
P +ST K+RSKR SR ++ + E KS + ++A N+ + +
Sbjct: 1148 DS----LPPISTTLKIRSKRVSRAPDTSLRQEGKSLSIDQETGGSDALNDGFEDAKCDLT 1203
Query: 1244 EDGNNNRVTSNQGE-------NGSPEDAQVKQISTSHDSLEPRPNRDKMYKAVYRR-SRS 1295
D + V + +P+ I+ P R M+ VYRR SR
Sbjct: 1204 LDCQKDGVVGTEISLRNDCVLELNPQICDALSIANDVPVSHSHPKR--MFDFVYRRKSRK 1261
Query: 1296 HKAVNNLADGSVLGESTXXXXXXXXXXXXXXXXXTNEALHTSGSLELETATCDANN-ERN 1354
HK NNL + L + H SGS E A+ + E N
Sbjct: 1262 HK--NNLDRDAALTKEVSPGSCSQD--------------HGSGSKSHEGASNGFHGTELN 1305
Query: 1355 NFKVQQGHESCMVRSPQNASTSRG-QLTEEERGRSSKLTVGLRSTRSRRSSYNIRETSPV 1413
+ +G + S SRG Q ++EE +S T+ LRSTR+R+S+Y ET P+
Sbjct: 1306 GLEKSEG---SLTHIQDKISDSRGNQNSQEELRSASGATLRLRSTRNRKSTYPFSETKPI 1362
Query: 1414 NIKKPTQSASKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIDYLRKRESGPWILLK 1473
KKP Q SWL LS HEEG RYIPQ GDEV YLRQGHQEY+++ RE PW +K
Sbjct: 1363 ETKKPQQLIENVSWLTLSIHEEGSRYIPQMGDEVAYLRQGHQEYLNFSSLREVAPWTSIK 1422
Query: 1474 -GHIRAVEYCRVQSLEYSHVPGSGDSCCKMTLQFVDPDSSVVGKSFKLTLPEVTGFPDFL 1532
G+I+AVE C+V+SLEY+ +PGSGDSCCKM L+ +DP+S V K+FKLTLPEV FPDFL
Sbjct: 1423 GGNIKAVEICKVESLEYATLPGSGDSCCKMILKVIDPNSEVFNKAFKLTLPEVVTFPDFL 1482
Query: 1533 VERTRFDAAMQRNWTRRDKCRVWWKNEDNSSGSWWDGRILWDKAKSPEFPDSPWERYNVR 1592
VER+R++AA+QRNWT RDKC+VWW++E GSWW+GRIL K KSP+FPDSPWERY V+
Sbjct: 1483 VERSRYEAAIQRNWTCRDKCKVWWRDEGEEDGSWWEGRILAVKPKSPDFPDSPWERYTVK 1542
Query: 1593 YKSDLSETHLHSPWELFDADTQWEQPHIDDNSRNXXXXXXXXXXXXGNTAQDRYGLRELK 1652
YKSD +ETHLHSPWELFDADT+WEQPHIDD RN QD +GLR+L
Sbjct: 1543 YKSDPAETHLHSPWELFDADTKWEQPHIDDEQRNRLLSALTKLETSDKRTQDSFGLRKLN 1602
Query: 1653 KISTKSKFINRFPVPLSLELILSRLENNYYRSLEAMKHDVSVLVSNATSFLEKDADMSAK 1712
+ S + NRFPVPLSLE+I SRLENNYYRS+EA++HDVSV++SNA +F ++ ++AK
Sbjct: 1603 QTVGNSSYSNRFPVPLSLEVIRSRLENNYYRSVEALRHDVSVMLSNAETFFGRNKSVAAK 1662
Query: 1713 IKRLSEWFTRTLSSS 1727
I LS WF RTL SS
Sbjct: 1663 ISNLSNWFDRTLPSS 1677
>AT2G47410.1 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr2:19449133-19456991 FORWARD
LENGTH=1520
Length = 1520
Score = 1193 bits (3087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/970 (61%), Positives = 715/970 (73%), Gaps = 42/970 (4%)
Query: 31 AEKTQLNVANQNHN-----MNVDVDLREVYFLILHFLSAGPCHKTCLQFWNELLEHELLP 85
A+ Q NV Q H+ ++D+DLREVYFLILHFLS GPC +T +E+LE LLP
Sbjct: 17 AKLVQGNVPLQPHDSHSSLTDLDMDLREVYFLILHFLSIGPCERTFGHLRDEILEKGLLP 76
Query: 86 RRYHSWYSRSGACSGNADDDGLSFPLSYDKLVERYPHIEKDHLVKLLKQL-LNTASPSLG 144
RRYHSW+SRSG SG ADDDG+S PLSYD L+ERYPHIEKDHLVKLLKQL LN + PS
Sbjct: 77 RRYHSWWSRSGIYSGRADDDGISLPLSYDNLIERYPHIEKDHLVKLLKQLILNPSFPSHM 136
Query: 145 MSTRNAPNAADVPTLLGRGSFSLLSYDRDKMNEEAKRPAAYMRWPHMKANQVHGLNLREI 204
NAPNAADVPTLLG G+FSL+ + +++A+ A+Y+RWPHM A+QV GL+LREI
Sbjct: 137 RVEGNAPNAADVPTLLGSGTFSLVDRSNNIESQKARHVASYLRWPHMHADQVRGLSLREI 196
Query: 205 GGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRTRGHRNAVYCAILDRSGRYVITGSD 264
GGGF +HHRAPSI +AC+AIAKPSTMVQKMQNIK+ RGHRNAVYCAI DRSGRYVITGSD
Sbjct: 197 GGGFRKHHRAPSILSACHAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSD 256
Query: 265 DRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISIL 324
DRLVKIWSMETA CLASCRGH+GDITD D VIRVWRLPDG+PIS+L
Sbjct: 257 DRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVL 316
Query: 325 RGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXX 384
RGHTGAVTAIAFSPR +VYQLLSSSDDGTCRIWDAR++Q +PR+YVP
Sbjct: 317 RGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVP----SPSDANTG 372
Query: 385 XXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACKFSVDDADQPNHELDMQSGNEN 444
HQI CCA+NANGT+FVTGSSD+ ARVW+A K ++DDA+QP HELD+ G+EN
Sbjct: 373 STSNASQSHQILCCAYNANGTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRGHEN 432
Query: 445 DVNYVQFSGCAVASRFSAAETLKEENIPKFKNSWLNHENIVTCSRDGRAIIWIPKSRRAH 504
DVNYVQFSGCAVA + S A+ LKE++ PKFKNSW H+NIVTCSRDG AIIW P+SR+ H
Sbjct: 433 DVNYVQFSGCAVAPKSSTADALKEDSYPKFKNSWFCHDNIVTCSRDGSAIIWTPRSRKFH 492
Query: 505 GKSGRWTRAYHLRVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAAIMDCRI 564
GKSGRW + YHL+V LPTPRGVNMI+WSLDNRFVLAAIMDCRI
Sbjct: 493 GKSGRWMKGYHLKVPPPPLPPQPPRGGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMDCRI 552
Query: 565 CVWNASDGSLVHSLTGHTESTYVLDVQPFNPRSAMSAGYDGRTIVWDIWEGKPIRIYEIS 624
CVWNA+DGSLVH LTGH+ES+YVLDV PFNPR AMSAGYDG+TI+WDIWEG PI++YEI
Sbjct: 553 CVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIWEGIPIKVYEIG 612
Query: 625 HFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQKDAKYDQFFLGDYRPLIQDTHGNV 684
FKLVDGKFS DGTSI+LSDDVGQ+Y L+TGQGESQK+AKYDQFFLGDYRPLI+DT+G+V
Sbjct: 613 RFKLVDGKFSQDGTSIVLSDDVGQIYFLNTGQGESQKNAKYDQFFLGDYRPLIRDTNGHV 672
Query: 685 LDQETQIVPYRRNLQDLLCDSALIPYPEPYQTEFQQRRLGALGLEWRPSSLRLAVGPDFS 744
LDQETQ++P+RRNLQDLLCDS++IPYPEP QT FQQRRLGALG+EWRPSS++ +VGPDFS
Sbjct: 673 LDQETQLLPHRRNLQDLLCDSSMIPYPEPDQTMFQQRRLGALGVEWRPSSIKFSVGPDFS 732
Query: 745 LDPDFHMLPLADLDVLTEPLPEFIDAMDWEPEIEVFSDDADSEYNFTEDXXXXXXXXXXX 804
L D+ M PLADLD L EPLPEFIDAM WEPE EV SDD DSEYN +
Sbjct: 733 LGQDYIMPPLADLDRLIEPLPEFIDAMYWEPEHEVLSDDNDSEYN--AEVSSDGARASPC 790
Query: 805 XXXXXXXXXXTDNSEEEDIHMDSIRRSKRKKQKNETEIMTSSGRRVKRRNLDECDGNTFS 864
+++S+ E+IH +S KR+++ + + TSSGRR K R LDE D +
Sbjct: 791 SNSSNELECSSEDSDVENIH-ESSYHWKRRRKHPKVNVSTSSGRRDK-RILDENDSSNSG 848
Query: 865 SNRNRKGKSVKKTSRSKYSNTKSSRPQRAAARNALHLFSKITGAPTDGEEDSLLGDFSDS 924
R + + V K S+ K+S+ K+SRPQRAAA+NA L SKI+G+ +D +D D+
Sbjct: 849 IKRTKNRRIVVKASKRKHSDVKASRPQRAAAQNARSLLSKISGSSSDEVDD-------DN 901
Query: 925 ESTLQESNIDSDESGRASQNDQLNCSKGKEVLLSESQDTKSHELTETHVNAVNRRRLVLK 984
+S SN +SD S + + Q K ++ E+ N ++RL++K
Sbjct: 902 DS----SNSESDRS-----------------IPTLRQLDKPSQMLESLSNDKQKKRLIVK 940
Query: 985 FPIRDSSQPM 994
++ ++ M
Sbjct: 941 ISVKKPAESM 950
Score = 309 bits (792), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/304 (49%), Positives = 198/304 (65%), Gaps = 3/304 (0%)
Query: 1422 ASKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIDYLRKRESGPWILLKGHIRAVEY 1481
+ K SWLLLS HEEGCRYIPQ GDEV+Y +QGHQE++ + L ++ AVE
Sbjct: 1215 SGKISWLLLSEHEEGCRYIPQLGDEVIYFKQGHQEFLKTKELNDRDRSRYLPRNLGAVEI 1274
Query: 1482 CRVQSLEYSHVPGSGDSCCKMTLQFVDPDSSVVG-KSFKLTLPEVTGFPDFLVERTRFDA 1540
C+V+ L Y PGSGDSCCKMTL+ +D SS K F+LTLPE+ FPDF+VE+TR+DA
Sbjct: 1275 CKVEKLNYDTYPGSGDSCCKMTLRVLDSSSSHASRKEFQLTLPELINFPDFIVEKTRYDA 1334
Query: 1541 AMQRNWTRRDKCRVWWKNEDNSSGSWWDGRILWDKAKSPEFPDSPWERYNVRYKSDLSET 1600
A+Q NW ++CRVWW++ G+WW+GRI + KS +FP+SPWERY V Y++ ET
Sbjct: 1335 AIQTNWKIGNECRVWWRDATGEGGAWWEGRIESSQVKSTDFPESPWERYRVVYET--GET 1392
Query: 1601 HLHSPWELFDADTQWEQPHIDDNSRNXXXXXXXXXXXXGNTAQDRYGLRELKKISTKSKF 1660
LHSPWE + + WE+ I+D R + QD YG+++L + + K F
Sbjct: 1393 SLHSPWEFDNPEFPWEKSTIEDERREKLLSLFAGLVKSISKHQDSYGIQKLNEAAQKMDF 1452
Query: 1661 INRFPVPLSLELILSRLENNYYRSLEAMKHDVSVLVSNATSFLEKDADMSAKIKRLSEWF 1720
NRFPVPL ELI RLEN YYRS+E+ KHDV ++SNA + + A M +KIKRL +
Sbjct: 1453 CNRFPVPLYPELIHERLENQYYRSIESFKHDVDAMLSNAELYFVRSAHMLSKIKRLRDKL 1512
Query: 1721 TRTL 1724
T+TL
Sbjct: 1513 TKTL 1516
>AT2G47410.2 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr2:19449133-19456991 FORWARD
LENGTH=1519
Length = 1519
Score = 1191 bits (3082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/971 (61%), Positives = 718/971 (73%), Gaps = 45/971 (4%)
Query: 31 AEKTQLNVANQNHN-----MNVDVDLREVYFLILHFLSAGPCHKTCLQFWNELLEHELLP 85
A+ Q NV Q H+ ++D+DLREVYFLILHFLS GPC +T +E+LE LLP
Sbjct: 17 AKLVQGNVPLQPHDSHSSLTDLDMDLREVYFLILHFLSIGPCERTFGHLRDEILEKGLLP 76
Query: 86 RRYHSWYSRSGACSGNADDDGLSFPLSYDKLVERYPHIEKDHLVKLLKQL-LNTASPSLG 144
RRYHSW+SRSG SG ADDDG+S PLSYD L+ERYPHIEKDHLVKLLKQL LN + PS
Sbjct: 77 RRYHSWWSRSGIYSGRADDDGISLPLSYDNLIERYPHIEKDHLVKLLKQLILNPSFPSHM 136
Query: 145 MSTRNAPNAADVPTLLGRGSFSLLSYDRDKM-NEEAKRPAAYMRWPHMKANQVHGLNLRE 203
NAPNAADVPTLLG G+FSL+ DR+ + +++A+ A+Y+RWPHM A+QV GL+LRE
Sbjct: 137 RVEGNAPNAADVPTLLGSGTFSLV--DRNNIESQKARHVASYLRWPHMHADQVRGLSLRE 194
Query: 204 IGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRTRGHRNAVYCAILDRSGRYVITGS 263
IGGGF +HHRAPSI +AC+AIAKPSTMVQKMQNIK+ RGHRNAVYCAI DRSGRYVITGS
Sbjct: 195 IGGGFRKHHRAPSILSACHAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGS 254
Query: 264 DDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISI 323
DDRLVKIWSMETA CLASCRGH+GDITD D VIRVWRLPDG+PIS+
Sbjct: 255 DDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISV 314
Query: 324 LRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARHTQSVPRLYVPRXXXXXXXXXX 383
LRGHTGAVTAIAFSPR +VYQLLSSSDDGTCRIWDAR++Q +PR+YVP
Sbjct: 315 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVP----SPSDANT 370
Query: 384 XXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLARVWNACKFSVDDADQPNHELDMQSGNE 443
HQI CCA+NANGT+FVTGSSD+ ARVW+A K ++DDA+QP HELD+ G+E
Sbjct: 371 GSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRGHE 430
Query: 444 NDVNYVQFSGCAVASRFSAAETLKEENIPKFKNSWLNHENIVTCSRDGRAIIWIPKSRRA 503
NDVNYVQFSGCAVA + S A+ LKE++ PKFKNSW H+NIVTCSRDG AIIW P+SR+
Sbjct: 431 NDVNYVQFSGCAVAPKSSTADALKEDSYPKFKNSWFCHDNIVTCSRDGSAIIWTPRSRKF 490
Query: 504 HGKSGRWTRAYHLRVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAAIMDCR 563
HGKSGRW + YHL+V LPTPRGVNMI+WSLDNRFVLAAIMDCR
Sbjct: 491 HGKSGRWMKGYHLKVPPPPLPPQPPRGGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMDCR 550
Query: 564 ICVWNASDGSLVHSLTGHTESTYVLDVQPFNPRSAMSAGYDGRTIVWDIWEGKPIRIYEI 623
ICVWNA+DGSLVH LTGH+ES+YVLDV PFNPR AMSAGYDG+TI+WDIWEG PI++YEI
Sbjct: 551 ICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIWEGIPIKVYEI 610
Query: 624 SHFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQKDAKYDQFFLGDYRPLIQDTHGN 683
FKLVDGKFS DGTSI+LSDDVGQ+Y L+TGQGESQK+AKYDQFFLGDYRPLI+DT+G+
Sbjct: 611 GRFKLVDGKFSQDGTSIVLSDDVGQIYFLNTGQGESQKNAKYDQFFLGDYRPLIRDTNGH 670
Query: 684 VLDQETQIVPYRRNLQDLLCDSALIPYPEPYQTEFQQRRLGALGLEWRPSSLRLAVGPDF 743
VLDQETQ++P+RRNLQDLLCDS++IPYPEP QT FQQRRLGALG+EWRPSS++ +VGPDF
Sbjct: 671 VLDQETQLLPHRRNLQDLLCDSSMIPYPEPDQTMFQQRRLGALGVEWRPSSIKFSVGPDF 730
Query: 744 SLDPDFHMLPLADLDVLTEPLPEFIDAMDWEPEIEVFSDDADSEYNFTEDXXXXXXXXXX 803
SL D+ M PLADLD L EPLPEFIDAM WEPE EV SDD DSEYN +
Sbjct: 731 SLGQDYIMPPLADLDRLIEPLPEFIDAMYWEPEHEVLSDDNDSEYN--AEVSSDGARASP 788
Query: 804 XXXXXXXXXXXTDNSEEEDIHMDSIRRSKRKKQKNETEIMTSSGRRVKRRNLDECDGNTF 863
+++S+ E+IH +S KR+++ + + TSSGRR K R LDE D +
Sbjct: 789 CSNSSNELECSSEDSDVENIH-ESSYHWKRRRKHPKVNVSTSSGRRDK-RILDENDSSNS 846
Query: 864 SSNRNRKGKSVKKTSRSKYSNTKSSRPQRAAARNALHLFSKITGAPTDGEEDSLLGDFSD 923
R + + V K S+ K+S+ K+SRPQRAAA+NA L SKI+G+ +D +D D
Sbjct: 847 GIKRTKNRRIVVKASKRKHSDVKASRPQRAAAQNARSLLSKISGSSSDEVDD-------D 899
Query: 924 SESTLQESNIDSDESGRASQNDQLNCSKGKEVLLSESQDTKSHELTETHVNAVNRRRLVL 983
++S SN +SD S + + Q K ++ E+ N ++RL++
Sbjct: 900 NDS----SNSESDRS-----------------IPTLRQLDKPSQMLESLSNDKQKKRLIV 938
Query: 984 KFPIRDSSQPM 994
K ++ ++ M
Sbjct: 939 KISVKKPAESM 949
Score = 309 bits (792), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/304 (49%), Positives = 198/304 (65%), Gaps = 3/304 (0%)
Query: 1422 ASKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIDYLRKRESGPWILLKGHIRAVEY 1481
+ K SWLLLS HEEGCRYIPQ GDEV+Y +QGHQE++ + L ++ AVE
Sbjct: 1214 SGKISWLLLSEHEEGCRYIPQLGDEVIYFKQGHQEFLKTKELNDRDRSRYLPRNLGAVEI 1273
Query: 1482 CRVQSLEYSHVPGSGDSCCKMTLQFVDPDSSVVG-KSFKLTLPEVTGFPDFLVERTRFDA 1540
C+V+ L Y PGSGDSCCKMTL+ +D SS K F+LTLPE+ FPDF+VE+TR+DA
Sbjct: 1274 CKVEKLNYDTYPGSGDSCCKMTLRVLDSSSSHASRKEFQLTLPELINFPDFIVEKTRYDA 1333
Query: 1541 AMQRNWTRRDKCRVWWKNEDNSSGSWWDGRILWDKAKSPEFPDSPWERYNVRYKSDLSET 1600
A+Q NW ++CRVWW++ G+WW+GRI + KS +FP+SPWERY V Y++ ET
Sbjct: 1334 AIQTNWKIGNECRVWWRDATGEGGAWWEGRIESSQVKSTDFPESPWERYRVVYET--GET 1391
Query: 1601 HLHSPWELFDADTQWEQPHIDDNSRNXXXXXXXXXXXXGNTAQDRYGLRELKKISTKSKF 1660
LHSPWE + + WE+ I+D R + QD YG+++L + + K F
Sbjct: 1392 SLHSPWEFDNPEFPWEKSTIEDERREKLLSLFAGLVKSISKHQDSYGIQKLNEAAQKMDF 1451
Query: 1661 INRFPVPLSLELILSRLENNYYRSLEAMKHDVSVLVSNATSFLEKDADMSAKIKRLSEWF 1720
NRFPVPL ELI RLEN YYRS+E+ KHDV ++SNA + + A M +KIKRL +
Sbjct: 1452 CNRFPVPLYPELIHERLENQYYRSIESFKHDVDAMLSNAELYFVRSAHMLSKIKRLRDKL 1511
Query: 1721 TRTL 1724
T+TL
Sbjct: 1512 TKTL 1515
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 237 IKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXX 296
++ GH N + R++++ SDD+ +K+W +ET + + GH
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 297 XXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCR 356
D +R+W + G + +L H+ VTA+ F+ R ++ ++SSS DG CR
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN-RDGSL--IVSSSYDGLCR 180
Query: 357 IWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNLA 416
IWD+ V L + F+ NG + G+ DN
Sbjct: 181 IWDSGTGHCVKTLI------------------DDENPPVSFVRFSPNGKFILVGTLDNTL 222
Query: 417 RVWN 420
R+WN
Sbjct: 223 RLWN 226
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVQPFNPRSAM-- 599
G++ + +S D RF+++A D + +W+ GSL+ +L GHT + ++ FNP+S M
Sbjct: 73 GISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN---FNPQSNMIV 129
Query: 600 SAGYDGRTIVWDIWEGKPIRIYEISHFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGES 659
S +D +WD+ GK +++ + F+ DG+ I+ S G I +G G
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHC 189
Query: 660 QK 661
K
Sbjct: 190 VK 191
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 189 PH-MKANQVHGLNLREIGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRT-RGHRNA 246
PH +K N +L++ GG P + AC + + ++K T G +
Sbjct: 3 PHSLKKNYRCSRSLKQFYGGGPFIVSSDGSFIACACGDVINIVDSTDSSVKSTIEGESDT 62
Query: 247 VYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXXXXXXXX 306
+ L + + + R +++W +ET C+ S +GH+G +
Sbjct: 63 LTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGA 122
Query: 307 DCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD--ARHTQ 364
D + VW + G RGH G V++I F P N L+S SDD T R+WD A++T+
Sbjct: 123 DRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNI-LISGSDDATVRVWDLNAKNTE 181
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 25/194 (12%)
Query: 230 MVQKMQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDI 289
+ + +++K GH A+ C G + + S D+ + +WS + GH I
Sbjct: 29 IYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI 88
Query: 290 TDXXXXXXXXXXXXXXXDCVIRVW--RLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLL 347
+D DC +R+W R P + +LRGHT V + F+P N + +
Sbjct: 89 SDLAWSSDSHYTCSASDDCTLRIWDARSPYEC-LKVLRGHTNFVFCVNFNPPSNLI---V 144
Query: 348 SSSDDGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVF 407
S S D T RIW+ + + V + I FN +G++
Sbjct: 145 SGSFDETIRIWEVKTGKCVRMI-------------------KAHSMPISSVHFNRDGSLI 185
Query: 408 VTGSSDNLARVWNA 421
V+ S D ++W+A
Sbjct: 186 VSASHDGSCKIWDA 199
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 237 IKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDXXXX 295
I R GH + + Y + SDD ++IW + Y CL RGH +
Sbjct: 78 IHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFN 137
Query: 296 XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 355
D IR+W + G + +++ H+ ++++ F+ R ++ ++S+S DG+C
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFN-RDGSL--IVSASHDGSC 194
Query: 356 RIWDARHTQSVPRL 369
+IWDA+ + L
Sbjct: 195 KIWDAKEGTCLKTL 208
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
LENGTH=473
Length = 473
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 147/407 (36%), Gaps = 70/407 (17%)
Query: 223 AIAKPSTMVQKMQNIKRTR----------GHRNAVYCAILDRSGRYVITGSDDRLVKIWS 272
++ K T+V + Q + R R GH AV C G+ + +GS D V++W
Sbjct: 78 SVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWD 137
Query: 273 METAYCLASCRGHDGDITDXXXXXXXXXXXXXXXDCVIRVWRLPDG-LPISILRGHTGAV 331
+ T L +C+GH + I W G L S L GH +
Sbjct: 138 LYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWI 197
Query: 332 TAIAFSP--RPNAVYQLLSSSDDGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXX 389
T I++ P + + ++SS DG RIWD +S+ L
Sbjct: 198 TGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICL-------------------S 238
Query: 390 XXXHQIFCCAFNANGTVFVTGSSDNLARVWNACKFS-VDDADQPNHELDMQSGNENDVNY 448
+ C + +G ++ TGS D ++W + + + H ++ + Y
Sbjct: 239 GHTLAVTCVKWGGDGIIY-TGSQDCTIKMWETTQGKLIRELKGHGHWINSLA---LSTEY 294
Query: 449 VQFSGCA--VASRFSAAETLKEENIPKF-KNSWLNHENIVTCSRDGRAIIWIPKSRRAHG 505
V +G ++ E K++ + ++ K + E +V+ S D +W P +
Sbjct: 295 VLRTGAFDHTGRQYPPNEE-KQKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPK 353
Query: 506 KSGRWTRAYHLRVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAAIMDCRIC 565
K R T L VN + +S D +++ +A D +
Sbjct: 354 K--RLTGHQQL--------------------------VNHVYFSPDGKWIASASFDKSVR 385
Query: 566 VWNASDGSLVHSLTGHTESTYVLDVQPFNPRSAMSAGYDGRTIVWDI 612
+WN G V GH Y + + R +S D +W+I
Sbjct: 386 LWNGITGQFVTVFRGHVGPVYQVSWSA-DSRLLLSGSKDSTLKIWEI 431
>AT1G79990.3 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=920
Length = 920
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M IK H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 89 MDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + +F+ + +TGS
Sbjct: 208 DHTAKVWDYQTKSCVQTL-------------------EGHTHNVSAVSFHPELPIIITGS 248
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 249 EDGTVRIWHATTYRLEN 265
>AT1G79990.5 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=912
Length = 912
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M IK H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 89 MDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + +F+ + +TGS
Sbjct: 208 DHTAKVWDYQTKSCVQTL-------------------EGHTHNVSAVSFHPELPIIITGS 248
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 249 EDGTVRIWHATTYRLEN 265
>AT1G52360.1 | Symbols: | Coatomer, beta' subunit |
chr1:19499282-19505397 FORWARD LENGTH=926
Length = 926
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M +K H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + F+ + +TGS
Sbjct: 208 DHTAKVWDYQTKSCVQTL-------------------EGHTHNVSAVCFHPELPIIITGS 248
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 249 EDGTVRIWHATTYRLEN 265
>AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein /
small nuclear ribonucleoprotein Prp4p-related |
chr2:17304319-17306855 REVERSE LENGTH=554
Length = 554
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 242 GHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXXX 301
GH + + SG+Y+ T S D+ ++W + T L GH +
Sbjct: 337 GHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALA 396
Query: 302 XXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR 361
D + RVW L G I + +GH V ++ FSP Y L S +D CRIWD R
Sbjct: 397 ASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG---YHLASGGEDNQCRIWDLR 453
Query: 362 HTQSVPRLYV 371
+S LY+
Sbjct: 454 MRKS---LYI 460
>AT3G15980.3 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M +K H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + F+ + +TGS
Sbjct: 208 DHTAKVWDYQTKSCVQTL-------------------DGHTHNVSAVCFHPELPIIITGS 248
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 249 EDGTVRIWHATTYRLEN 265
>AT3G15980.2 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M +K H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + F+ + +TGS
Sbjct: 208 DHTAKVWDYQTKSCVQTL-------------------DGHTHNVSAVCFHPELPIIITGS 248
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 249 EDGTVRIWHATTYRLEN 265
>AT3G15980.5 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=930
Length = 930
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M +K H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + F+ + +TGS
Sbjct: 208 DHTAKVWDYQTKSCVQTL-------------------DGHTHNVSAVCFHPELPIIITGS 248
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 249 EDGTVRIWHATTYRLEN 265
>AT3G15980.4 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=914
Length = 914
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M +K H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + F+ + +TGS
Sbjct: 208 DHTAKVWDYQTKSCVQTL-------------------DGHTHNVSAVCFHPELPIIITGS 248
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 249 EDGTVRIWHATTYRLEN 265
>AT3G15980.1 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=909
Length = 909
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M +K H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQV 148
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 149 VFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 207
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + F+ + +TGS
Sbjct: 208 DHTAKVWDYQTKSCVQTL-------------------DGHTHNVSAVCFHPELPIIITGS 248
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 249 EDGTVRIWHATTYRLEN 265
>AT1G52360.2 | Symbols: | Coatomer, beta' subunit |
chr1:19499420-19505397 FORWARD LENGTH=970
Length = 970
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M +K H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 133 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQV 192
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 193 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY-LITGSD 251
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + F+ + +TGS
Sbjct: 252 DHTAKVWDYQTKSCVQTL-------------------EGHTHNVSAVCFHPELPIIITGS 292
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 293 EDGTVRIWHATTYRLEN 309
>AT1G79990.1 | Symbols: | structural molecules |
chr1:30084522-30091949 FORWARD LENGTH=1135
Length = 1135
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 22/197 (11%)
Query: 234 MQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHDGDITDX 292
M IK H + + C + + YV++ SDD L+K+W E + C GH +
Sbjct: 304 MDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQV 363
Query: 293 XXX-XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D I++W L P L H V + + + Y L++ SD
Sbjct: 364 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPY-LITGSD 422
Query: 352 DGTCRIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
D T ++WD + V L H + +F+ + +TGS
Sbjct: 423 DHTAKVWDYQTKSCVQTL-------------------EGHTHNVSAVSFHPELPIIITGS 463
Query: 412 SDNLARVWNACKFSVDD 428
D R+W+A + +++
Sbjct: 464 EDGTVRIWHATTYRLEN 480
>AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:5671133-5675106 FORWARD LENGTH=479
Length = 479
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Query: 235 QNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXX 294
+N + +GH V D S + TGS DR +KIW + T + GH G +
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 295 XXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 354
D ++ W L I GH V +A P + V L+ D
Sbjct: 221 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVV---LTGGRDSV 277
Query: 355 CRIWDAR 361
CR+WD R
Sbjct: 278 CRVWDIR 284
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Query: 242 GHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXXX 301
GH VY A G +V++ S D +++WS + L +GH+ + D
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 302 XXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR 361
D R+W + P+ I+ GH V + + P N + + S D T R+WD +
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI---ATGSSDKTVRLWDVQ 532
Query: 362 HTQSVPRLYV 371
+ V R+++
Sbjct: 533 TGECV-RIFI 541
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 236 NIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXX 295
N+ +GH V+ A G Y + S DR +IWSM+ L GH D+
Sbjct: 452 NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWH 511
Query: 296 XXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 355
D +R+W + G + I GH V ++A S P+ Y + S +DGT
Sbjct: 512 PNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMS--PDGRY-MASGDEDGTI 568
Query: 356 RIWDARHTQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGSSDNL 415
+WD S R P ++ +++ G++ +GS+D
Sbjct: 569 MMWDL----STARCITPLMGHNSC---------------VWSLSYSGEGSLLASGSADCT 609
Query: 416 ARVWNA 421
++W+
Sbjct: 610 VKLWDV 615
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Query: 231 VQKMQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDIT 290
+ ++Q ++ GH + V C + Y+ TGS D+ V++W ++T C+ GH +
Sbjct: 489 MDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVL 548
Query: 291 DXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSS 350
D I +W L I+ L GH V ++++S + L S S
Sbjct: 549 SLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSL---LASGS 605
Query: 351 DDGTCRIWDA 360
D T ++WD
Sbjct: 606 ADCTVKLWDV 615
>AT5G50230.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:20448632-20450855 REVERSE LENGTH=509
Length = 509
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 551 DNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVQPFNPRSAMSAGYDGRTIVW 610
DN+ V+AA + VW+ S G + H+LTGHT+ +DV F+ R +SA YD +W
Sbjct: 278 DNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 337
Query: 611 DIWEG 615
D+ +G
Sbjct: 338 DLHKG 342
>AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 |
chr4:9023775-9027443 FORWARD LENGTH=486
Length = 486
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 3/127 (2%)
Query: 235 QNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXX 294
+N + +GH V D S + TGS DR +KIW + T + GH +
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 295 XXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 354
D ++ W L I GH V +A P + LL+ D
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDV---LLTGGRDSV 283
Query: 355 CRIWDAR 361
CR+WD R
Sbjct: 284 CRVWDIR 290
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Query: 237 IKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXX 296
I+ GH + VYC L + ++TG D + ++W + T + + GHD +
Sbjct: 253 IRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP 312
Query: 297 XXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 354
D I+ W L G +S L H +V A+ P+ NA S+S D T
Sbjct: 313 TDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENA---FASASADNT 367
>AT2G21390.1 | Symbols: | Coatomer, alpha subunit |
chr2:9152428-9156577 FORWARD LENGTH=1218
Length = 1218
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 12/168 (7%)
Query: 192 KANQVHGLNLREIGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRTRGHRNAVYCAI 251
K+N+V GL+ H + P I A+ ++ + I R H V
Sbjct: 8 KSNRVKGLSF---------HPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVH 58
Query: 252 LDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXXXXXXXXDCVIR 311
S ++G DD +K+W+ +T CL + GH I D IR
Sbjct: 59 FHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIR 118
Query: 312 VWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 359
+W IS+L GH V +F P+ + V +S+S D T R+WD
Sbjct: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLV---VSASLDQTVRVWD 163
>AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA |
chr3:16116026-16121247 FORWARD LENGTH=1040
Length = 1040
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 20/135 (14%)
Query: 241 RGHRNAVYCAILDRSGRYVITGSDDRLVKIWS-----------------METAYCLASCR 283
R H +V C ++ RYV +GSDD++++I +E + + R
Sbjct: 63 RDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLR 122
Query: 284 GHDGDITDXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAV 343
GH D+ D D + +W + G+ ++LRGH V + + P + +
Sbjct: 123 GHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFI 182
Query: 344 YQLLSSSDDGTCRIW 358
S SDD T IW
Sbjct: 183 A---SQSDDKTVIIW 194
>AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA |
chr3:16116026-16121247 FORWARD LENGTH=1058
Length = 1058
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 20/135 (14%)
Query: 241 RGHRNAVYCAILDRSGRYVITGSDDRLVKIWS-----------------METAYCLASCR 283
R H +V C ++ RYV +GSDD++++I +E + + R
Sbjct: 63 RDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLR 122
Query: 284 GHDGDITDXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAV 343
GH D+ D D + +W + G+ ++LRGH V + + P + +
Sbjct: 123 GHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFI 182
Query: 344 YQLLSSSDDGTCRIW 358
S SDD T IW
Sbjct: 183 A---SQSDDKTVIIW 194
>AT3G18950.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:6536900-6538321 FORWARD LENGTH=473
Length = 473
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 206 GGFPRHHRAPSIRAACYAIAKPSTMVQ--KMQNIKRTRGHRNAVYCAILDRSGRYVITGS 263
GG+ R P+++ P V+ + +N+ + R H +AV C L+ + +GS
Sbjct: 210 GGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIR-HYDAVSCLSLNEELGLLYSGS 268
Query: 264 DDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXXXXXXXXDCVIRVWRL------PD 317
D+ +K+W + + CL S + HD D + D ++VW+
Sbjct: 269 WDKTLKVWRLSDSKCLESIQAHD-DAINTVAAGFDDLLFTGSADGTLKVWKRELQGKGTK 327
Query: 318 GLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR 361
+++L AVTA+A + VY S DGT W+ +
Sbjct: 328 HFLVNVLMKQENAVTALAVNITAAVVY---CGSSDGTVNFWEGQ 368
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 71/189 (37%), Gaps = 31/189 (16%)
Query: 237 IKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHDGDITDXXX 294
I GH +AVY + +G + +GS DR + +W + C +GH I D
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHW 104
Query: 295 XXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 354
D +R W + G I + H+ V + + R + ++S SDDGT
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPL--IISGSDDGT 162
Query: 355 CRIWDARH---TQSVPRLYVPRXXXXXXXXXXXXXXXXXXXHQIFCCAFNANGTVFVTGS 411
++WD R Q+ P Y QI +F+ TG
Sbjct: 163 AKLWDMRQRGAIQTFPDKY-----------------------QITAVSFSDAADKIFTGG 199
Query: 412 SDNLARVWN 420
DN +VW+
Sbjct: 200 VDNDVKVWD 208
>AT1G62020.1 | Symbols: | Coatomer, alpha subunit |
chr1:22919814-22923728 FORWARD LENGTH=1216
Length = 1216
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 12/168 (7%)
Query: 192 KANQVHGLNLREIGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRTRGHRNAVYCAI 251
K+N+V GL+ H + P I A+ ++ + I R H V
Sbjct: 8 KSNRVKGLSF---------HPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVH 58
Query: 252 LDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXXXXXXXXDCVIR 311
S ++G DD +K+W+ + CL + GH I D IR
Sbjct: 59 FHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
Query: 312 VWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 359
+W +S+L GH V +F P+ + V +S+S D T R+WD
Sbjct: 119 IWNWQSRTCVSVLTGHNHYVMCASFHPKEDLV---VSASLDQTVRVWD 163
>AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1179
Length = 1179
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 231 VQKMQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDIT 290
V++ + ++ GHR+ G ++ +GS D +KIW + C+ + +GH I+
Sbjct: 87 VEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGIS 146
Query: 291 DXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSS 350
D V++VW L G + + H G + ++ F P + L + S
Sbjct: 147 TIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHP---LEFLLATGS 203
Query: 351 DDGTCRIWD 359
D T + WD
Sbjct: 204 ADRTVKFWD 212
>AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40
repeat family protein | chr1:27725059-27729722 FORWARD
LENGTH=511
Length = 511
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 3/130 (2%)
Query: 243 HRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXXXX 302
H + V C R + +GS D +KIW + T C+ H +T
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 303 XXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARH 362
D R+ L G + RGHT V F+ + +++++S D T ++WD++
Sbjct: 322 STSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGS---RIITASSDCTVKVWDSKT 378
Query: 363 TQSVPRLYVP 372
T + P
Sbjct: 379 TDCLQTFKPP 388
>AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1181
Length = 1181
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 231 VQKMQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDIT 290
V++ + ++ GHR+ G ++ +GS D +KIW + C+ + +GH I+
Sbjct: 87 VEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGIS 146
Query: 291 DXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSS 350
D V++VW L G + + H G + ++ F P + L + S
Sbjct: 147 TIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHP---LEFLLATGS 203
Query: 351 DDGTCRIWD 359
D T + WD
Sbjct: 204 ADRTVKFWD 212
>AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:25873146-25875021 FORWARD LENGTH=299
Length = 299
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 241 RGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITDXXXXXXXXX 300
+GH AV A + G Y +T DR +++W+ + + + H ++ D
Sbjct: 15 KGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAK 74
Query: 301 XXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDA 360
D + W + G I RGH G V A+ F+ + V +S+ D + R+WD
Sbjct: 75 FCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVV---VSAGFDRSLRVWDC 131
Query: 361 R 361
R
Sbjct: 132 R 132
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 231 VQKMQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDIT 290
+++ + ++ GHR+ G + +GS D +KIW + C+ + +GH +
Sbjct: 88 LEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 291 DXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSS 350
D V++VW L G + + H G + ++ F P + L + S
Sbjct: 148 VLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE---FLLATGS 204
Query: 351 DDGTCRIWD 359
D T + WD
Sbjct: 205 ADKTVKFWD 213
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 231 VQKMQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDIT 290
+++ + ++ GHR+ G + +GS D +KIW + C+ + +GH +
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 291 DXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSS 350
D +++VW L G ++ + H G + ++ F P + L + S
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE---FLLATGS 204
Query: 351 DDGTCRIWD 359
D T + WD
Sbjct: 205 ADRTVKFWD 213
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 231 VQKMQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDIT 290
+++ + ++ GHR+ G + +GS D +KIW + C+ + +GH +
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 291 DXXXXXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSS 350
D +++VW L G ++ + H G + ++ F P + L + S
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE---FLLATGS 204
Query: 351 DDGTCRIWD 359
D T + WD
Sbjct: 205 ADRTVKFWD 213
>AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein |
chr5:26857268-26860974 FORWARD LENGTH=613
Length = 613
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 89/243 (36%), Gaps = 47/243 (19%)
Query: 395 IFCCAFNANGTVFVTGSSDNLARVWNACKFSVDDADQPNHELDMQSGNENDVNYVQFSGC 454
IF +N G +TGS D A VW+ A++ + + SG DV++
Sbjct: 368 IFSLKWNKKGDYLLTGSVDRTAVVWDV------KAEEWKQQFEFHSGPTLDVDWRNNVSF 421
Query: 455 AVASRFSAAETLK-EENIPKFKNSWLNHEN-------------IVTCSRDGRAIIW-IPK 499
A +S S K E P ++ H+ + +CS D A IW I +
Sbjct: 422 ATSSTDSMIYLCKIGETRPA--KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQ 479
Query: 500 SRRAHGKSGRWTRAYHLRVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLA-A 558
S H Y +R PT G N + + + LA A
Sbjct: 480 STFVHDLREHTKEIYTIRWS------------------PTGPGTN----NPNKQLTLASA 517
Query: 559 IMDCRICVWNASDGSLVHSLTGHTESTYVLDVQPFNPRSAMSAGYDGRTIVWDIWEGKPI 618
D + +W+A G ++ S GH E Y L P N S D +W I EGK +
Sbjct: 518 SFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSP-NGEYIASGSLDKSIHIWSIKEGKIV 576
Query: 619 RIY 621
+ Y
Sbjct: 577 KTY 579
>AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
protein (SCD1) | chr1:18139419-18148826 REVERSE
LENGTH=1187
Length = 1187
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 232 QKMQNIKRTRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHDGDITD 291
Q Q ++ +GH + V C + SG V+T + D VK+W + T C+A+ I
Sbjct: 927 QTTQLLEELKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILS 985
Query: 292 XXXXXXXXXXXXXXXDCVIRVWRLPDGLPISILRGHTGAVTAIAFSPRPNAVYQLLSSSD 351
D V +W + G + L+GHT + +I L++ SD
Sbjct: 986 LEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVED-----TLITGSD 1040
Query: 352 DGTCRIW 358
D T R+W
Sbjct: 1041 DWTARVW 1047