Miyakogusa Predicted Gene

Lj6g3v1549200.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1549200.2 Non Chatacterized Hit- tr|B0CAZ3|B0CAZ3_ACAM1
Cyclase/dehydrase, putative OS=Acaryochloris marina (s,37.58,3e-18,Bet
v1-like,NULL; Polyketide_cyc,Streptomyces cyclase/dehydrase;
seg,NULL,CUFF.59599.2
         (336 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08720.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Streptomyc...   292   2e-79
AT4G01650.1 | Symbols:  | Polyketide cyclase / dehydrase and lip...    85   8e-17
AT4G01650.2 | Symbols:  | Polyketide cyclase / dehydrase and lip...    83   2e-16

>AT5G08720.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Streptomyces
           cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis
           thaliana protein match is: Polyketide cyclase /
           dehydrase and lipid transport protein
           (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:2841536-2845335 REVERSE LENGTH=719
          Length = 719

 Score =  292 bits (748), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 157/288 (54%), Positives = 187/288 (64%), Gaps = 20/288 (6%)

Query: 51  HKTTHLSSTQFKPRTHLRKEGNFTAPQEEGDREVHCELHVVSWREQRVRAEISINADIHF 110
           H T H S    +    LR++       E G+R+V CE+ V+SWRE+R+R EI +++D   
Sbjct: 54  HGTRH-SGAGGRGDNGLRRDSGL-GFDERGERKVRCEVDVISWRERRIRGEIWVDSDSQS 111

Query: 111 VWKALTDYEHLADFIPNLVWSGRIRCPHPGRIWLEQRGFQRAMYWHIEACVVLDLQEIIN 170
           VW  LTDYE LADFIPNLVWSGRI CPHPGRIWLEQRG QRA+YWHIEA VVLDL E ++
Sbjct: 112 VWNVLTDYERLADFIPNLVWSGRIPCPHPGRIWLEQRGLQRALYWHIEARVVLDLHECLD 171

Query: 171 SAWDRELHFSMVDGDFKKFDGKW-------SSSTILSYEVNVIPRFNFPAIFLERIIRYD 223
           S   RELHFSMVDGDFKKF+GKW       S  T+LSYEVNVIPRFNFPAIFLERIIR D
Sbjct: 172 SPNGRELHFSMVDGDFKKFEGKWSVKSGIRSVGTVLSYEVNVIPRFNFPAIFLERIIRSD 231

Query: 224 LPVNLRALVYRVERNINGNHRLPLQGNNLHKIYMANTSPVEKINGTLCDSDILPPGEYKE 283
           LPVNLRA+  + E+ I  +   P    +L  I  +  +P    NG   DS          
Sbjct: 232 LPVNLRAVARQAEK-IYKDCGKPSIIEDLLGIISSQPAPS---NGIEFDS-------LAT 280

Query: 284 VLAXXXXXXXXXXXXEVNNNWGIFGKVCRLDRPCVVDEVRLRIFDGLL 331
             +            E+NNNWG++GK C+LD+PC VDEV LR FDGLL
Sbjct: 281 ERSVASSVGSLAHSNELNNNWGVYGKACKLDKPCTVDEVHLRRFDGLL 328



 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 13/146 (8%)

Query: 100 AEISINADIHFVWKALTDYEHLADFIPNLVWSGRIRCPHPGRIWLEQRGFQRAMYWHIEA 159
           A I++ A +  VWK LT YE L + +PNL  S +I      ++ + Q G +  +Y  + A
Sbjct: 339 ASITVKAPVCEVWKVLTSYESLPEIVPNLAIS-KILSRDNNKVRILQEGCKGLLYMVLHA 397

Query: 160 CVVLDLQEIINSAWDRELHFSMVDGDFKKFDGKW------SSSTILSYEVNVIPRFN--F 211
             VLDL EI     ++E+ F  V+GDF   +GKW      S  T+L Y V    R +   
Sbjct: 398 RAVLDLHEI----REQEIRFEQVEGDFDSLEGKWIFEQLGSHHTLLKYTVESKMRKDSFL 453

Query: 212 PAIFLERIIRYDLPVNLRALVYRVER 237
               +E +I  DLP NL A+   +E+
Sbjct: 454 SEAIMEEVIYEDLPSNLCAIRDYIEK 479


>AT4G01650.1 | Symbols:  | Polyketide cyclase / dehydrase and lipid
           transport protein | chr4:704578-705866 REVERSE
           LENGTH=288
          Length = 288

 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 25/186 (13%)

Query: 80  GDREVHCELHVVSWREQRVRAEISINADIHFVWKALTDYEHLADFIPNLVWSGRIRCPHP 139
           GD  V  EL  +    +R+R++I + A +  VW  LTDYE L+DFIP LV S  +     
Sbjct: 99  GDDGVLIELKKLEKSSRRIRSKIGMEASLDSVWSVLTDYEKLSDFIPGLVVSELVE-KEG 157

Query: 140 GRIWLEQRGFQR-AMYWHIEACVVLDLQ----EIINSAWDRELHFSMVDGDFKKFDGKWS 194
            R+ L Q G Q  A+     A  VLD      E++     RE+ F MV+GDF+ F+GKWS
Sbjct: 158 NRVRLFQMGQQNLALGLKFNAKAVLDCYEKELEVLPHGRRREIDFKMVEGDFQLFEGKWS 217

Query: 195 SS-------------------TILSYEVNVIPRFNFPAIFLERIIRYDLPVNLRALVYRV 235
                                T L+Y V+V P+   P   +E  +  ++  NL ++    
Sbjct: 218 IEQLDKGIHGEALDLQFKDFRTTLAYTVDVKPKMWLPVRLVEGRLCKEIRTNLMSIRDAA 277

Query: 236 ERNING 241
           ++ I G
Sbjct: 278 QKVIEG 283


>AT4G01650.2 | Symbols:  | Polyketide cyclase / dehydrase and lipid
           transport protein | chr4:704578-706931 REVERSE
           LENGTH=211
          Length = 211

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 25/186 (13%)

Query: 80  GDREVHCELHVVSWREQRVRAEISINADIHFVWKALTDYEHLADFIPNLVWSGRIRCPHP 139
           GD  V  EL  +    +R+R++I + A +  VW  LTDYE L+DFIP LV S  +     
Sbjct: 22  GDDGVLIELKKLEKSSRRIRSKIGMEASLDSVWSVLTDYEKLSDFIPGLVVSELVE-KEG 80

Query: 140 GRIWLEQRGFQR-AMYWHIEACVVLDLQ----EIINSAWDRELHFSMVDGDFKKFDGKWS 194
            R+ L Q G Q  A+     A  VLD      E++     RE+ F MV+GDF+ F+GKWS
Sbjct: 81  NRVRLFQMGQQNLALGLKFNAKAVLDCYEKELEVLPHGRRREIDFKMVEGDFQLFEGKWS 140

Query: 195 SS-------------------TILSYEVNVIPRFNFPAIFLERIIRYDLPVNLRALVYRV 235
                                T L+Y V+V P+   P   +E  +  ++  NL ++    
Sbjct: 141 IEQLDKGIHGEALDLQFKDFRTTLAYTVDVKPKMWLPVRLVEGRLCKEIRTNLMSIRDAA 200

Query: 236 ERNING 241
           ++ I G
Sbjct: 201 QKVIEG 206