Miyakogusa Predicted Gene
- Lj6g3v1319710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1319710.1 Non Chatacterized Hit- tr|I3S9R2|I3S9R2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
L7: 60S ribosomal protein L7,Ribosomal protein L7, eukaryotic;
Ribosomal_L30_N,Ribosomal p,CUFF.59356.1
(245 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G13580.1 | Symbols: | Ribosomal protein L30/L7 family protei... 373 e-104
AT3G13580.2 | Symbols: | Ribosomal protein L30/L7 family protei... 373 e-104
AT3G13580.3 | Symbols: | Ribosomal protein L30/L7 family protei... 373 e-104
AT2G01250.1 | Symbols: | Ribosomal protein L30/L7 family protei... 372 e-103
AT2G44120.2 | Symbols: | Ribosomal protein L30/L7 family protei... 369 e-102
AT2G44120.1 | Symbols: | Ribosomal protein L30/L7 family protei... 369 e-102
AT2G01250.2 | Symbols: | Ribosomal protein L30/L7 family protei... 255 1e-68
AT1G80750.1 | Symbols: | Ribosomal protein L30/L7 family protei... 182 3e-46
>AT3G13580.1 | Symbols: | Ribosomal protein L30/L7 family protein |
chr3:4433809-4435109 FORWARD LENGTH=244
Length = 244
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/244 (71%), Positives = 209/244 (85%)
Query: 2 VSKEEVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQ 61
+++ E K VVPESVLKK+KR EEWALA KQ+LEAAKK+ A RKLI++RA+QY+KEY E+
Sbjct: 1 MTEAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEK 60
Query: 62 QKELVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLK 121
++EL++LKREAKLKGGFYV+PEAKLLFI+RIRGINA+ PKT+K FNGVFLK
Sbjct: 61 ERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLK 120
Query: 122 VNKATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHGI 181
VNKAT+NML+RVEPYVTYGYPNLKS++ELIYKRG+GK+N QR ALTDNS+++Q LGKHGI
Sbjct: 121 VNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGI 180
Query: 182 ICIEDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELI 241
IC+EDLIHEI+TVGPHF+EANNFLWPF RNHYVEGGDAGNRE++INEL+
Sbjct: 181 ICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELV 240
Query: 242 RRMN 245
RRMN
Sbjct: 241 RRMN 244
>AT3G13580.2 | Symbols: | Ribosomal protein L30/L7 family protein |
chr3:4433809-4435109 FORWARD LENGTH=244
Length = 244
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/244 (71%), Positives = 209/244 (85%)
Query: 2 VSKEEVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQ 61
+++ E K VVPESVLKK+KR EEWALA KQ+LEAAKK+ A RKLI++RA+QY+KEY E+
Sbjct: 1 MTEAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEK 60
Query: 62 QKELVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLK 121
++EL++LKREAKLKGGFYV+PEAKLLFI+RIRGINA+ PKT+K FNGVFLK
Sbjct: 61 ERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLK 120
Query: 122 VNKATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHGI 181
VNKAT+NML+RVEPYVTYGYPNLKS++ELIYKRG+GK+N QR ALTDNS+++Q LGKHGI
Sbjct: 121 VNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGI 180
Query: 182 ICIEDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELI 241
IC+EDLIHEI+TVGPHF+EANNFLWPF RNHYVEGGDAGNRE++INEL+
Sbjct: 181 ICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELV 240
Query: 242 RRMN 245
RRMN
Sbjct: 241 RRMN 244
>AT3G13580.3 | Symbols: | Ribosomal protein L30/L7 family protein |
chr3:4433809-4435109 FORWARD LENGTH=244
Length = 244
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/244 (71%), Positives = 209/244 (85%)
Query: 2 VSKEEVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQ 61
+++ E K VVPESVLKK+KR EEWALA KQ+LEAAKK+ A RKLI++RA+QY+KEY E+
Sbjct: 1 MTEAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEK 60
Query: 62 QKELVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLK 121
++EL++LKREAKLKGGFYV+PEAKLLFI+RIRGINA+ PKT+K FNGVFLK
Sbjct: 61 ERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLK 120
Query: 122 VNKATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHGI 181
VNKAT+NML+RVEPYVTYGYPNLKS++ELIYKRG+GK+N QR ALTDNS+++Q LGKHGI
Sbjct: 121 VNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGI 180
Query: 182 ICIEDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELI 241
IC+EDLIHEI+TVGPHF+EANNFLWPF RNHYVEGGDAGNRE++INEL+
Sbjct: 181 ICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELV 240
Query: 242 RRMN 245
RRMN
Sbjct: 241 RRMN 244
>AT2G01250.1 | Symbols: | Ribosomal protein L30/L7 family protein |
chr2:132943-134264 REVERSE LENGTH=242
Length = 242
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/240 (74%), Positives = 203/240 (84%)
Query: 6 EVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQQKEL 65
E K VVPESVLKK+KR EEWAL KQ +EAAKKK A +RKLI+ RA+QY+KEY E++KEL
Sbjct: 3 ESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKEL 62
Query: 66 VRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNKA 125
+ LKREAKLKGGFYV+PEAKLLFI+RIRGINA+ PKT+K FNGVFLKVNKA
Sbjct: 63 ISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 122
Query: 126 TVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHGIICIE 185
T+NML+RVEPYVTYG+PNLKS++ELIYKRGYGK+N QRIALTDNS++EQ LGKHGIIC E
Sbjct: 123 TMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTE 182
Query: 186 DLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELIRRMN 245
DLIHEILTVGPHF+EANNFLWPF RNHYVEGGDAGNRE++INELIRRMN
Sbjct: 183 DLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242
>AT2G44120.2 | Symbols: | Ribosomal protein L30/L7 family protein |
chr2:18249227-18250417 REVERSE LENGTH=247
Length = 247
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/240 (73%), Positives = 200/240 (83%)
Query: 6 EVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQQKEL 65
E K VVPESVLKK KR EEWALA K + AAKKK +RKLI+ RA+QYAKEY E+ EL
Sbjct: 8 ESKVVVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNEL 67
Query: 66 VRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNKA 125
+RLKREAKLKGGFYV+PEAKLLFI+RIRGINA+ PKT+K FNGVFLKVNKA
Sbjct: 68 IRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 127
Query: 126 TVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHGIICIE 185
TVNML+RVEPYVTYGYPNLKS++ELIYKRGYGK+N QRIALTDNS+++Q LGKHGIIC+E
Sbjct: 128 TVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVE 187
Query: 186 DLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELIRRMN 245
DLIHEI+TVGPHF+EANNFLWPF RNHYVEGGDAGNRE++INEL+RRMN
Sbjct: 188 DLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 247
>AT2G44120.1 | Symbols: | Ribosomal protein L30/L7 family protein |
chr2:18249227-18250402 REVERSE LENGTH=242
Length = 242
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/240 (73%), Positives = 200/240 (83%)
Query: 6 EVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQQKEL 65
E K VVPESVLKK KR EEWALA K + AAKKK +RKLI+ RA+QYAKEY E+ EL
Sbjct: 3 ESKVVVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNEL 62
Query: 66 VRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNKA 125
+RLKREAKLKGGFYV+PEAKLLFI+RIRGINA+ PKT+K FNGVFLKVNKA
Sbjct: 63 IRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 122
Query: 126 TVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHGIICIE 185
TVNML+RVEPYVTYGYPNLKS++ELIYKRGYGK+N QRIALTDNS+++Q LGKHGIIC+E
Sbjct: 123 TVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVE 182
Query: 186 DLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINELIRRMN 245
DLIHEI+TVGPHF+EANNFLWPF RNHYVEGGDAGNRE++INEL+RRMN
Sbjct: 183 DLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242
>AT2G01250.2 | Symbols: | Ribosomal protein L30/L7 family protein |
chr2:133038-134264 REVERSE LENGTH=184
Length = 184
Score = 255 bits (652), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 147/175 (84%)
Query: 6 EVKAVVPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYDEQQKEL 65
E K VVPESVLKK+KR EEWAL KQ +EAAKKK A +RKLI+ RA+QY+KEY E++KEL
Sbjct: 3 ESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKEL 62
Query: 66 VRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNKA 125
+ LKREAKLKGGFYV+PEAKLLFI+RIRGINA+ PKT+K FNGVFLKVNKA
Sbjct: 63 ISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 122
Query: 126 TVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKHG 180
T+NML+RVEPYVTYG+PNLKS++ELIYKRGYGK+N QRIALTDNS++EQ G
Sbjct: 123 TMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQPTTSFG 177
>AT1G80750.1 | Symbols: | Ribosomal protein L30/L7 family protein |
chr1:30349052-30350434 FORWARD LENGTH=247
Length = 247
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 143/247 (57%), Gaps = 3/247 (1%)
Query: 2 VSKEEVKAV--VPESVLKKQKRNEEWALATKQQLEAAKKKRAVSRKLIWSRAQQYAKEYD 59
+++EE K + +PE VLKK+K +E A K+QLE + + R + + E+
Sbjct: 1 MAEEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVHEFR 60
Query: 60 EQQKELVRLKREAKLKGGFYVNPEAKLLFIVRIRGINAMHPKTRKXXXXXXXXXXFNGVF 119
++ +++R+K+ K ++ L+FI+RI+G N MHPKT++ F GVF
Sbjct: 61 AKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVF 120
Query: 120 LKVNKATVNMLQRVEPYVTYGYPNLKSIRELIYKRGYGKVNKQRIALTDNSVIEQTLGKH 179
K + L +V+PYVTYGYPN KS+++LIYK+G + + LTDN++IEQ LG+H
Sbjct: 121 AKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEH 180
Query: 180 GIICIEDLIHEILTVGPHFREANNFLWPFXXXXXXXXXXXXRNH-YVEGGDAGNREDYIN 238
I+ IEDL++EI VG HFRE FL P + + EGGD GNRED IN
Sbjct: 181 KILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSEGGDTGNREDKIN 240
Query: 239 ELIRRMN 245
+LI +MN
Sbjct: 241 DLISKMN 247