Miyakogusa Predicted Gene

Lj6g3v1078040.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078040.2 tr|G7ID06|G7ID06_MEDTR Serine decarboxylase
OS=Medicago truncatula GN=MTR_1g099050 PE=3
SV=1,64.76,0,Pyridoxal_deC,Pyridoxal phosphate-dependent
decarboxylase; PLP-dependent transferases,Pyridoxal phos,CUFF.59027.2
         (309 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43710.1 | Symbols: emb1075 | Pyridoxal phosphate (PLP)-depen...   321   3e-88

>AT1G43710.1 | Symbols: emb1075 | Pyridoxal phosphate
           (PLP)-dependent transferases superfamily protein |
           chr1:16486534-16488298 REVERSE LENGTH=482
          Length = 482

 Score =  321 bits (823), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 144/254 (56%), Positives = 186/254 (73%)

Query: 54  GESRTNLSKTIAKYVVKLNQNKSQCLGFPVNQEFNYDALTPLLHYHLNNASDPFLGSGYG 113
           G+    ++  +A+Y   L +     LG+P N +F+Y AL  L H+ +NN  DPF+ S YG
Sbjct: 82  GDKEAYMASVLARYRKTLVERTKNHLGYPYNLDFDYGALGQLQHFSINNLGDPFIESNYG 141

Query: 114 QNSVEFEVCVLDWFAKLWQMEKGDYWGYVTTGGTEGNLHGILMGREKFQDGILYTSENSH 173
            +S  FEV VLDWFA+LW++E+ DYWGY+T  GTEGNLHGIL+GRE F DGILY S  SH
Sbjct: 142 VHSRPFEVGVLDWFARLWEIERDDYWGYITNCGTEGNLHGILVGREMFPDGILYASRESH 201

Query: 174 YSLFKIARMYRMQCVKINTLVSGGIXXXXXXXXXXXXXXXXXIINLNIGTIMKGAIDNID 233
           YS+FK ARMYRM+C K++TL+SG I                 I+N+NIGT +KGA+D++D
Sbjct: 202 YSVFKAARMYRMECEKVDTLMSGEIDCDDLRKKLLANKDKPAILNVNIGTTVKGAVDDLD 261

Query: 234 LVIETLEECGFPQDRFYIHCDGALSGIMLPFLKRAPRINFKKPIGSISISGHKFLGCPIP 293
           LVI+TLEECGF  DRFYIHCDGAL G+M+PF+KRAP++ F KPIGS+S+SGHKF+GCP+P
Sbjct: 262 LVIKTLEECGFSHDRFYIHCDGALFGLMMPFVKRAPKVTFNKPIGSVSVSGHKFVGCPMP 321

Query: 294 CGVILTRSEHVNAL 307
           CGV +TR EH+  L
Sbjct: 322 CGVQITRMEHIKVL 335