Miyakogusa Predicted Gene
- Lj6g3v0908780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0908780.1 Non Chatacterized Hit- tr|I1N0S6|I1N0S6_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,82.09,0,DEAD,DNA/RNA
helicase, DEAD/DEAH box type, N-terminal; Helicase_C,Helicase,
C-terminal; coiled-coil,,CUFF.58465.1
(744 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 758 0.0
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 251 2e-66
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 244 1e-64
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 213 3e-55
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 210 2e-54
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 209 5e-54
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 209 6e-54
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 208 9e-54
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 208 1e-53
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 207 2e-53
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 202 5e-52
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 202 5e-52
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 202 5e-52
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 202 5e-52
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 202 8e-52
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 202 1e-51
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 201 1e-51
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 201 2e-51
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 201 2e-51
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 200 3e-51
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 199 7e-51
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 199 7e-51
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 198 1e-50
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 198 1e-50
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 198 1e-50
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 198 1e-50
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 198 1e-50
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 2e-50
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 197 2e-50
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 194 1e-49
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 193 4e-49
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 192 6e-49
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 189 6e-48
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 188 1e-47
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 185 1e-46
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 185 1e-46
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 182 1e-45
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 180 4e-45
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 179 4e-45
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 179 6e-45
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 179 6e-45
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 177 3e-44
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 177 3e-44
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 175 1e-43
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 175 1e-43
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 174 3e-43
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 172 7e-43
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 172 8e-43
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 172 1e-42
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 172 1e-42
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 172 1e-42
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 171 2e-42
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 170 3e-42
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 170 4e-42
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 168 2e-41
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 166 8e-41
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 164 1e-40
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 164 2e-40
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 164 2e-40
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 163 4e-40
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 162 1e-39
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 159 6e-39
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 158 1e-38
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 158 1e-38
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 158 1e-38
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 153 3e-37
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 152 7e-37
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 148 1e-35
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 148 2e-35
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 143 4e-34
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 143 5e-34
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 137 2e-32
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 133 4e-31
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 131 1e-30
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 130 2e-30
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 108 1e-23
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 95 2e-19
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 68 2e-11
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 56 8e-08
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 54 4e-07
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 50 8e-06
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/542 (68%), Positives = 425/542 (78%), Gaps = 23/542 (4%)
Query: 59 QSPWDFAKYSESVAEEHARRSTTSVDEKIT-ALRLRSTPL------------IHAPDPEE 105
QSPWDFA YS SV EEHARR TTS+DEKI+ A++ R P+ A D E
Sbjct: 70 QSPWDFASYSSSVGEEHARRHTTSIDEKISKAIQHRPVPISINEEEEEEEEEEDASDAET 129
Query: 106 DNSSEY--EPDQQEDYRPXXXXXXXGNAGDNKPYFASSDGTSFHADSFMELNLSRPLLRA 163
D EY E D+ +Y+P KP+F++ DG SFHAD+FMELNLSRPLLRA
Sbjct: 130 DKQEEYLSEDDEAAEYKPEDATP--------KPFFSTVDGVSFHADTFMELNLSRPLLRA 181
Query: 164 CEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLLFRPKRMHAIRV 223
CE LGY KPTPIQAACIPLAL+GRD+C SAITGSGKTAAFALPTLERLLFRPKR+ A RV
Sbjct: 182 CETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRV 241
Query: 224 LILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALRSMPDIVVATPGRMID 283
LILTPTRELAVQ+HSMI+ LAQFTDIKC LIVGGLS + QEV LRSMPDIVVATPGRMID
Sbjct: 242 LILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMID 301
Query: 284 HLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQTMLFSATMTEEINEL 343
HLRNSM EADRLL+ GF EI ELVR+CPK+RQTMLFSATMTEE+ EL
Sbjct: 302 HLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKEL 361
Query: 344 IKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGT 403
+KLSL+KPLRLSADPS +RP LT N EAVLL++C++TF SKVIIFSGT
Sbjct: 362 VKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGT 421
Query: 404 KQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGV 463
KQAAHRLKI+FGLAGLKAAELHGNLTQAQRL++LE FRKQ+VDFL+ATDVAARGLDI+GV
Sbjct: 422 KQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGV 481
Query: 464 QTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKGIAKRAGAKLKSRIVA 523
QTVIN+ACPR++ SYVHRVGRTARAGREGYAVTFVTD+DRSLLK IAK+ G+KLKSR++
Sbjct: 482 QTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIP 541
Query: 524 EQSILKWSQIIDQMEDQIAEVLQEEREEIALRXXXXXXXXXXXXXXHREEIFSRPKRTWF 583
EQSI+KWSQIID+MEDQ + V+ ER+E ALR HR+EI++RPKRTWF
Sbjct: 542 EQSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHRDEIYARPKRTWF 601
Query: 584 VT 585
+T
Sbjct: 602 MT 603
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 215/398 (54%), Gaps = 14/398 (3%)
Query: 130 NAGDNKPYF-------ASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPL 182
++ N P F SSD TS A +F L L+ + C+ LG KPTP+Q C+P
Sbjct: 34 DSDQNTPQFEKFTNPNPSSDTTS--ATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPK 91
Query: 183 ALSGRDICGSAITGSGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEK 242
L+GRD+ G A TGSGKTAAFALP L RL P + + L++TPTRELA Q+ +
Sbjct: 92 ILAGRDVLGLAQTGSGKTAAFALPILHRLAEDP---YGVFALVVTPTRELAFQLAEQFKA 148
Query: 243 LAQFTDIKCCLIVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNS--MXXXXXXXXXXX 300
L +++C +IVGG+ Q ++L S P IV+ TPGR+ L N+ +
Sbjct: 149 LGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLV 208
Query: 301 XXEADRLLELGFNAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPST 360
EADR+L++GF E+ + + PK RQT+LFSATMT + L++ S +K A
Sbjct: 209 LDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGL 268
Query: 361 KRPATLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLK 420
K TLT +L+ +IF T + RL ++ ++
Sbjct: 269 KTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVE 328
Query: 421 AAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVH 480
+H +Q+ RL AL +F+ +V L+ATDVA+RGLDI V VIN+ PRD YVH
Sbjct: 329 NIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVH 388
Query: 481 RVGRTARAGREGYAVTFVTDNDRSLLKGIAKRAGAKLK 518
RVGRTARAGR G AV+ +T+ D L+ I + G K++
Sbjct: 389 RVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKME 426
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 209/388 (53%), Gaps = 12/388 (3%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
+F EL + L++ACE LG+ P+ IQA +P AL G+D+ G A TGSGKT AFA+P L+
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 210 RLL-----FRPKRMH----AIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLST 260
LL PK+ A +L+PTRELA+Q+ E L ++C ++VGG+
Sbjct: 70 ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129
Query: 261 KVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELV 320
Q +AL P ++VATPGR+ DH+ ++ EADRLL F +++++
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189
Query: 321 RMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXN 380
P +R+T LFSATMT+++ +L + L P+++ A + +T+
Sbjct: 190 EEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEA---ASKYSTVDTLKQQYRFVAAKY 246
Query: 381 LEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQF 440
+ L+ + S+ S +IF+ T L ++ G +A + G +TQ++RL AL +F
Sbjct: 247 KDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKF 306
Query: 441 RKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTD 500
+ + + LV TDVA+RGLDI V VIN+ P + Y+HRVGRTARAGR G ++ V
Sbjct: 307 KAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQ 366
Query: 501 NDRSLLKGIAKRAGAKLKSRIVAEQSIL 528
+ I K G KL E +L
Sbjct: 367 YELEWYIQIEKLIGKKLPEYPAEEDEVL 394
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 201/381 (52%), Gaps = 12/381 (3%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
+F + S ++ A + Y KPT IQ +P+ LSGRD+ G A TGSGKTAAF LP +
Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288
Query: 210 RLLFRP--KRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVAL 267
++ +P +R +I PTRELA Q+ +K ++ ++ + GG+S Q L
Sbjct: 289 HIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 268 RSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKR 327
++ +IVVATPGR+ID L+ EADR+ +LGF ++ +V R
Sbjct: 349 KAGCEIVVATPGRLIDMLKMK-ALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 407
Query: 328 QTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLA 387
QT+LFSATM ++ +L + LS P+R++ +T L +L
Sbjct: 408 QTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAE-KLPWLLEK 466
Query: 388 MCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDF 447
+ V++F+ K ++ L K A LHG+ QA R+E L++F+
Sbjct: 467 LPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHV 526
Query: 448 LVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAG-REGYAVTFVTDNDRSLL 506
L+ATDVAARGLDI ++TV+N+ +D+ +VHR+GRT RAG R+G A T VT +
Sbjct: 527 LIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQRE---- 582
Query: 507 KGIAKRAGAKLKSRIVAEQSI 527
A+ AG + S + A Q++
Sbjct: 583 ---ARFAGELVNSLVAAGQNV 600
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 187/358 (52%), Gaps = 14/358 (3%)
Query: 151 FMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLER 210
F LNL + A + GY PTPIQ +PL LSG D+ A TGSGKTAAF +P LE+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 211 LLFRPKRMH----AIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVA 266
L + H +R LIL+PTR+LA Q ++L +FTD++ L+VGG S + Q
Sbjct: 90 L-----KQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEE 144
Query: 267 LRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKK 326
L PD+++ATPGR++ L EAD L +GF ++H+++ +
Sbjct: 145 LTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSEN 204
Query: 327 RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLL 386
RQT+LFSAT+ + E K L +P + D K L + LL
Sbjct: 205 RQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKY---SALL 261
Query: 387 AMCSKTFTS--KVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQ 444
+ + +S + +IF TK + +F L ++ + +G++ Q R + +FR ++
Sbjct: 262 YLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARK 321
Query: 445 VDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDND 502
L+ TD+AARG+DI + VIN+ P +VHRVGR ARAGR G A +FVT D
Sbjct: 322 TMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPED 379
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 187/363 (51%), Gaps = 4/363 (1%)
Query: 151 FMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLER 210
F + N +L A LG+++PTPIQA P+AL GRD+ G A TGSGKT A+ LP L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 211 LLFRPK--RMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALR 268
+ +P+ + VLIL PTRELAVQ+ K + ++ I GG Q LR
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 269 SMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQ 328
+IV+ATPGR+ID L EADR+L++GF +I ++V RQ
Sbjct: 287 RGVEIVIATPGRLIDML-ECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 345
Query: 329 TMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAM 388
T+L+SAT E+ L + L P + ST A + +L +
Sbjct: 346 TLLWSATWPREVETLARQFLRDPYKAIIG-STDLKANQSINQVIEIVPTPEKYNRLLTLL 404
Query: 389 CSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFL 448
SK++IF TK+ ++ + G A +HG+ TQ++R L +F+ + +
Sbjct: 405 KQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIM 464
Query: 449 VATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKG 508
ATDVAARGLD+ ++ V+N+ P L Y+HR+GRT RAG +G A TF T ++ +
Sbjct: 465 TATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARE 524
Query: 509 IAK 511
+ K
Sbjct: 525 LVK 527
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 212/428 (49%), Gaps = 26/428 (6%)
Query: 102 DPEEDNSSEYEPDQQEDYRPXXXXXXXGNAGDNKPYFASSDGTSFHADSFMELNLSRPL- 160
+P E++ SE EP E +A ++ P S D ++F E++L L
Sbjct: 116 NPFENDDSEPEPAFTE----QDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDLGEALN 171
Query: 161 --LRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLLF----- 213
+R C+ Y KPTP+Q IP+ L GRD+ A TGSGKTAAF P + ++
Sbjct: 172 LNIRRCK---YVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQ 228
Query: 214 RPKRMHAIRVL--ILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALRSMP 271
RP+ + L IL+PTRELA Q+H +K + T +K + GG Q L
Sbjct: 229 RPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGV 288
Query: 272 DIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVR---MCPKK-R 327
DI+VATPGR+ D L + EADR+L++GF +I ++V M P+ R
Sbjct: 289 DILVATPGRLNDLLERA-RVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVR 347
Query: 328 QTMLFSATMTEEINELIKLSLSKPLRLSAD-PSTKRPATLTXXXXXXXXXXXXNLEAVLL 386
QT+LFSAT EI L L+ + L+ + + +L +L
Sbjct: 348 QTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLH 407
Query: 387 AMCSKTFTSK---VIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQ 443
A K ++F TK+ A L+ + G A +HG+ TQ +R AL+ F+
Sbjct: 408 AQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSG 467
Query: 444 QVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDR 503
+ LVATDVAARGLDI V V+NF P D+ YVHR+GRT RAG+ G A F D +
Sbjct: 468 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNT 527
Query: 504 SLLKGIAK 511
SL + +A+
Sbjct: 528 SLARPLAE 535
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 192/391 (49%), Gaps = 16/391 (4%)
Query: 136 PYFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAIT 195
P S D ++F E++L L + Y KPTP+Q IP+ +GRD+ A T
Sbjct: 133 PIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQT 192
Query: 196 GSGKTAAFALPTLERLLF-----RPKRMHAIRVL--ILTPTRELAVQVHSMIEKLAQFTD 248
GSGKTAAF P + ++ RP+ + + L IL+PTRELA Q+H K + T
Sbjct: 193 GSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTG 252
Query: 249 IKCCLIVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLL 308
+K + GG Q L DI+VATPGR+ D L EADR+L
Sbjct: 253 VKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERG-RVSLQMVRFLALDEADRML 311
Query: 309 ELGFNAEIHELVRMC----PKKRQTMLFSATMTEEINELIKLSLSKPLRLSAD-PSTKRP 363
++GF +I ++V+ P RQTMLFSAT EI L LS + L+ +
Sbjct: 312 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTD 371
Query: 364 ATLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSK---VIIFSGTKQAAHRLKIIFGLAGLK 420
+ +L +L A K ++F TK+ A L+ + G
Sbjct: 372 LIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFP 431
Query: 421 AAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVH 480
A +HG+ +Q +R AL F+ + LVATDVAARGLDI V V+NF P D+ YVH
Sbjct: 432 ATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 491
Query: 481 RVGRTARAGREGYAVTFVTDNDRSLLKGIAK 511
R+GRT RAG G A F DN+ ++ K +A+
Sbjct: 492 RIGRTGRAGNSGLATAFFNDNNTTMAKPLAE 522
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 185/365 (50%), Gaps = 25/365 (6%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
SF L LLR + G+S P+PIQA P+A+ RDI A TGSGKT + +P
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 210 RLLFRPKRMH-----AIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQE 264
L +R+H +L+L+PTRELA Q+ K + + I C + GG Q
Sbjct: 222 HL----QRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQL 277
Query: 265 VALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCP 324
+ DIVVATPGR+ D L EADR+L++GF +I ++V P
Sbjct: 278 KEIERGVDIVVATPGRLNDILE-MKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVP 336
Query: 325 KKRQTMLFSATMTEEINELIKLSLSKPLRLS---ADPSTKRPATLTXXXXXXXXXXXXNL 381
KRQT++++AT +E+ ++ L P +++ D + L
Sbjct: 337 TKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRL 396
Query: 382 EAVLLAMCSKTFTSKVIIFSGTK----QAAHRLKIIFGLAGLKAAELHGNLTQAQRLEAL 437
E +L S+ SK+IIF TK Q A L FG AA +HG+ +QA+R + L
Sbjct: 397 EQILR---SQEPGSKIIIFCSTKRMCDQLARNLTRTFG-----AAAIHGDKSQAERDDVL 448
Query: 438 EQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTF 497
QFR + LVATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF
Sbjct: 449 NQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 508
Query: 498 VTDND 502
D D
Sbjct: 509 FGDQD 513
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 196/376 (52%), Gaps = 13/376 (3%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
SF ++ +L + G+++PTPIQ+ P+A+ GRD+ G A TGSGKT ++ LP +
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 210 RLLFRPKRMHAIR--VLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVAL 267
+ +P H VL+L PTRELAVQ+ K + IK I GG+ Q L
Sbjct: 160 HVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 268 RSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKR 327
+ +IV+ATPGR+ID + S EADR+L++GF+ +I ++V R
Sbjct: 220 QKGVEIVIATPGRLIDMM-ESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDR 278
Query: 328 QTMLFSATMTEEINELIKLSLSKPLRL---SADPSTKRPATLTXXXXXXXXXXXXNLEAV 384
QT+ +SAT +E+ +L K L P ++ S+D R A L +
Sbjct: 279 QTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANR-AIRQIVDVISESQKYNKLVKL 337
Query: 385 LLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQ 444
L + S++++F TK+ ++ + G A +HG+ +QA+R L +FR +
Sbjct: 338 LEDIMD---GSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGK 394
Query: 445 VDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRS 504
+ ATDVAARGLD+ V+ VIN+ P L YVHR+GRT RAG +G A TF T +
Sbjct: 395 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANAR 454
Query: 505 L---LKGIAKRAGAKL 517
L I + AG K+
Sbjct: 455 FAKELTNILQEAGQKV 470
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 179/361 (49%), Gaps = 17/361 (4%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
SF LLR + G+S PTPIQA P+A+ GRDI A TGSGKT + +P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 210 RLL-FRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALR 268
L R +L+L+PTRELA Q+ K + + I C + GG Q L
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 269 SMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQ 328
DIVVATPGR+ D L EADR+L++GF +I ++V+ P KRQ
Sbjct: 279 RGADIVVATPGRLNDIL-EMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQ 337
Query: 329 TMLFSATMTEEINELIKLSLSKPLRLS---ADPSTKRPATLTXXXXXXXXXXXXNLEAVL 385
T++++AT + + ++ L P +++ D + LE +L
Sbjct: 338 TLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 386 LAMCSKTFTSKVIIFSGTK----QAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFR 441
S+ SKVIIF TK Q L FG AA +HG+ +Q +R L QFR
Sbjct: 398 R---SQEPGSKVIIFCSTKRMCDQLTRNLTRQFG-----AAAIHGDKSQPERDNVLNQFR 449
Query: 442 KQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDN 501
+ LVATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D
Sbjct: 450 SGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQ 509
Query: 502 D 502
D
Sbjct: 510 D 510
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 179/361 (49%), Gaps = 17/361 (4%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
SF LLR + G+S PTPIQA P+A+ GRDI A TGSGKT + +P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 210 RLL-FRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALR 268
L R +L+L+PTRELA Q+ K + + I C + GG Q L
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 269 SMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQ 328
DIVVATPGR+ D L EADR+L++GF +I ++V+ P KRQ
Sbjct: 279 RGADIVVATPGRLNDIL-EMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQ 337
Query: 329 TMLFSATMTEEINELIKLSLSKPLRLS---ADPSTKRPATLTXXXXXXXXXXXXNLEAVL 385
T++++AT + + ++ L P +++ D + LE +L
Sbjct: 338 TLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 386 LAMCSKTFTSKVIIFSGTK----QAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFR 441
S+ SKVIIF TK Q L FG AA +HG+ +Q +R L QFR
Sbjct: 398 R---SQEPGSKVIIFCSTKRMCDQLTRNLTRQFG-----AAAIHGDKSQPERDNVLNQFR 449
Query: 442 KQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDN 501
+ LVATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D
Sbjct: 450 SGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQ 509
Query: 502 D 502
D
Sbjct: 510 D 510
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 179/361 (49%), Gaps = 17/361 (4%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
SF LLR + G+S PTPIQA P+A+ GRDI A TGSGKT + +P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 210 RLL-FRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALR 268
L R +L+L+PTRELA Q+ K + + I C + GG Q L
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 269 SMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQ 328
DIVVATPGR+ D L EADR+L++GF +I ++V+ P KRQ
Sbjct: 279 RGADIVVATPGRLNDIL-EMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQ 337
Query: 329 TMLFSATMTEEINELIKLSLSKPLRLS---ADPSTKRPATLTXXXXXXXXXXXXNLEAVL 385
T++++AT + + ++ L P +++ D + LE +L
Sbjct: 338 TLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 386 LAMCSKTFTSKVIIFSGTK----QAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFR 441
S+ SKVIIF TK Q L FG AA +HG+ +Q +R L QFR
Sbjct: 398 R---SQEPGSKVIIFCSTKRMCDQLTRNLTRQFG-----AAAIHGDKSQPERDNVLNQFR 449
Query: 442 KQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDN 501
+ LVATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D
Sbjct: 450 SGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQ 509
Query: 502 D 502
D
Sbjct: 510 D 510
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 179/361 (49%), Gaps = 17/361 (4%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
SF LLR + G+S PTPIQA P+A+ GRDI A TGSGKT + +P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 210 RLL-FRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALR 268
L R +L+L+PTRELA Q+ K + + I C + GG Q L
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 269 SMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQ 328
DIVVATPGR+ D L EADR+L++GF +I ++V+ P KRQ
Sbjct: 279 RGADIVVATPGRLNDIL-EMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQ 337
Query: 329 TMLFSATMTEEINELIKLSLSKPLRLS---ADPSTKRPATLTXXXXXXXXXXXXNLEAVL 385
T++++AT + + ++ L P +++ D + LE +L
Sbjct: 338 TLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 386 LAMCSKTFTSKVIIFSGTK----QAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFR 441
S+ SKVIIF TK Q L FG AA +HG+ +Q +R L QFR
Sbjct: 398 R---SQEPGSKVIIFCSTKRMCDQLTRNLTRQFG-----AAAIHGDKSQPERDNVLNQFR 449
Query: 442 KQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDN 501
+ LVATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D
Sbjct: 450 SGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQ 509
Query: 502 D 502
D
Sbjct: 510 D 510
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 184/376 (48%), Gaps = 28/376 (7%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
S+ E L+ LL+A E GY KP+PIQ A IPL L RD+ G A TGSGKTAAF LP L
Sbjct: 314 SWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLA 373
Query: 210 RLLFRP-----KRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQE 264
+ P +++ PTRELA Q+ K A + + IVGG S + Q
Sbjct: 374 YISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQG 433
Query: 265 VALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCP 324
+ + +IV+ATPGR+ID L EADR++++GF ++ ++ P
Sbjct: 434 LKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLD-EADRMIDMGFEPQVAGVLDAMP 492
Query: 325 KK-----------------RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLT 367
R T +FSATM + L + L P+ ++ + K ++
Sbjct: 493 SSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLIS 552
Query: 368 XXXXXXXXXXXX-NLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHG 426
L+ +L + KT I+F TK+ + AG + LHG
Sbjct: 553 QHVIMMKESEKFFRLQKLLDELGEKT----AIVFVNTKKNCDSIAKNLDKAGYRVTTLHG 608
Query: 427 NLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTA 486
+Q QR +LE FR ++ + LVATDV RG+DI V VIN+ P+ + Y HR+GRT
Sbjct: 609 GKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTG 668
Query: 487 RAGREGYAVTFVTDND 502
RAG+ G A +F+T +D
Sbjct: 669 RAGKSGVATSFLTLHD 684
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 192/350 (54%), Gaps = 7/350 (2%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
+F L+LS A + +G+ T IQA I L G+D+ G+A TGSGKT AF +P +E
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 210 RLL---FRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVA 266
L F P+ + V+++ PTRELA+Q ++ E+L + +++GG + + +
Sbjct: 150 LLFKERFSPR--NGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQR 207
Query: 267 LRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKK 326
+ S ++V+ATPGR++DHL+N+ EADR+LE F ++++++++ PK
Sbjct: 208 IASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKT 267
Query: 327 RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLL 386
RQT LFSAT T ++ +L ++SL+ P+ + D +R T +L+
Sbjct: 268 RQTALFSATQTSKVKDLARVSLTSPVHVDVDDG-RRKVTNEGLEQGYCVVPSKQRLILLI 326
Query: 387 AMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVD 446
+ K K+++F T ++ I ++ + +++HG + Q +R + F K +
Sbjct: 327 SFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKG 386
Query: 447 FLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARA-GREGYAV 495
L+ TDVAARGLDI V +I + P T Y+HRVGRTAR G +G A+
Sbjct: 387 ILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKAL 436
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 181/359 (50%), Gaps = 13/359 (3%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
+F L +LR + G+ PTPIQA P+AL RDI A TGSGKT + +P
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF- 494
Query: 210 RLLFRPKRM---HAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVA 266
+L R R + VLIL PTRELA Q+ + + + I C + GG Q
Sbjct: 495 -ILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKE 553
Query: 267 LRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKK 326
L DIVVATPGR+ D L M EADR+L++GF +I ++V P +
Sbjct: 554 LERGADIVVATPGRLNDILEMKMIDFQQVSLLVLD-EADRMLDMGFEPQIRKIVNEIPPR 612
Query: 327 RQTMLFSATMTEEINELIKLSLSKPLRLS---ADPSTKRPATLTXXXXXXXXXXXXNLEA 383
RQT++++AT +E+ ++ L P++++ D A LE
Sbjct: 613 RQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQ 672
Query: 384 VLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQ 443
+L S+ SKVIIF TK+ L G A +HG+ TQ +R L QFR
Sbjct: 673 ILR---SQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRSG 728
Query: 444 QVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDND 502
+ L+ATDVAARGLDI ++ VIN+ P + YVHR+GRT RAG G A TF T+ D
Sbjct: 729 KSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQD 787
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 199/378 (52%), Gaps = 18/378 (4%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
+F E NL +L C+ + KP+PIQ+ P L GRD+ G A TGSGKT AF +P +
Sbjct: 117 TFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIM 174
Query: 210 RLLFRPKRMHAIR------VLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQ 263
+L + K++ L+L+PTRELAVQ+ ++ + + +K + GG S Q
Sbjct: 175 HVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQ 234
Query: 264 EVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMC 323
A+RS DIV+ TPGR+ D L S EADR+L++GF + ++
Sbjct: 235 ISAIRSGVDIVIGTPGRLRD-LIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNT 293
Query: 324 PKKRQTMLFSATMTEEINELIKLSLS-KPLRL---SADPSTKRPATLTXXXXXXXXXXXX 379
K RQ ++FSAT ++++L + + P+++ S D + +
Sbjct: 294 NKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHD-VMQIIEVLDERARDQ 352
Query: 380 NLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQ 439
L A LL K+ ++V++F+ K A RL+ G KA +HGN Q++R +L
Sbjct: 353 RLIA-LLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSL 411
Query: 440 FRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVT 499
F++ LVATDVAARGLDI V+ VIN+ P YVHR+GRT RAG++G A TF T
Sbjct: 412 FKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
Query: 500 DNDRSL---LKGIAKRAG 514
++ L L + + AG
Sbjct: 472 PLNKGLAGELVNVLREAG 489
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 180/353 (50%), Gaps = 25/353 (7%)
Query: 162 RACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLLFRPKRMH-- 219
R + G+S P+PIQA P+A+ RDI A TGSGKT + +P L +R+H
Sbjct: 242 RMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHL----QRIHND 297
Query: 220 ---AIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALRSMPDIVVA 276
+L+L+PTRELA Q+ K + + I C + GG Q + DIVVA
Sbjct: 298 SRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVA 357
Query: 277 TPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQTMLFSATM 336
TPGR+ D L EADR+L++GF +I ++V P KRQT++++AT
Sbjct: 358 TPGRLNDILEMK-RISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATW 416
Query: 337 TEEINELIKLSLSKPLRLS---ADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAMCSKTF 393
+E+ ++ L P +++ D + LE +L S+
Sbjct: 417 PKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILR---SQEP 473
Query: 394 TSKVIIFSGTK----QAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLV 449
SK+IIF TK Q A L FG AA +HG+ +QA+R + L QFR + LV
Sbjct: 474 GSKIIIFCSTKRMCDQLARNLTRTFG-----AAAIHGDKSQAERDDVLNQFRSGRTPVLV 528
Query: 450 ATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDND 502
ATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D D
Sbjct: 529 ATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQD 581
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 178/356 (50%), Gaps = 6/356 (1%)
Query: 151 FMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLER 210
+ + L+ +L + L Y KP PIQ +P+ +SGRD G A TGSGKT F LP L
Sbjct: 531 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 590
Query: 211 LLFRP--KRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALR 268
+ +P + L++ PTREL Q+HS I K ++ I+C + GG Q L+
Sbjct: 591 IKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELK 650
Query: 269 SMPDIVVATPGRMIDHLRNSMXXXXXXXXXX--XXXEADRLLELGFNAEIHELVRMCPKK 326
+IVV TPGRMID L S EADR+ ++GF +I +++ +
Sbjct: 651 RGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPE 710
Query: 327 RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLL 386
RQT+LFSAT ++ L + L+KP+ + + +T LL
Sbjct: 711 RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELL 770
Query: 387 AMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVD 446
S+ K+++F +++ L + LHG Q R + F+ +
Sbjct: 771 GEWSEK--GKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCN 828
Query: 447 FLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDND 502
L+AT VAARGLD+ ++ V+NF P YVHRVGRT RAGR+G AVTF++++D
Sbjct: 829 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 884
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 200/401 (49%), Gaps = 22/401 (5%)
Query: 133 DNKPYFASSDGTSFHADSFMELNLSRPLL-----RACEALGYSKPTPIQAACIPLALSGR 187
D+ Y D + AD EL +S+ L + E G + PIQ A + AL GR
Sbjct: 81 DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 140
Query: 188 DICGSAITGSGKTAAFALPTLERLLFRPKRMHAIR-------VLILTPTRELAVQVHSMI 240
DI A TG+GKT AF +P ++RL A R L+L PTRELA QV I
Sbjct: 141 DIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEI 200
Query: 241 EKLAQFTDIKCCLIVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXX 300
++ A + C + GG+S +Q+ AL D+VV TPGR+ID L
Sbjct: 201 KESAPYLSTVC--VYGGVSYTIQQSALTRGVDVVVGTPGRIID-LIEGRSLKLGEVEYLV 257
Query: 301 XXEADRLLELGFNAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLR--LSADP 358
EAD++L +GF + ++ P KRQ+MLFSATM + +L + L PL L D
Sbjct: 258 LDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQ 317
Query: 359 STKRPATLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAG 418
K + + + L+ + +K K I+F+ TK+ A + + L+
Sbjct: 318 DEKLAEGIKLYAIATTSTSKRTILSDLITVYAKG--GKTIVFTQTKRDADEVSL--ALSN 373
Query: 419 LKAAE-LHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTS 477
A E LHG+++Q QR L FR+ + LVATDVA+RGLDI V VI++ P D +
Sbjct: 374 SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPET 433
Query: 478 YVHRVGRTARAGREGYAVTFVTDNDRSLLKGIAKRAGAKLK 518
+VHR GRT RAG+EG A+ T + + ++ + + G +
Sbjct: 434 FVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFE 474
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 200/401 (49%), Gaps = 22/401 (5%)
Query: 133 DNKPYFASSDGTSFHADSFMELNLSRPLL-----RACEALGYSKPTPIQAACIPLALSGR 187
D+ Y D + AD EL +S+ L + E G + PIQ A + AL GR
Sbjct: 81 DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 140
Query: 188 DICGSAITGSGKTAAFALPTLERLLFRPKRMHAIR-------VLILTPTRELAVQVHSMI 240
DI A TG+GKT AF +P ++RL A R L+L PTRELA QV I
Sbjct: 141 DIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEI 200
Query: 241 EKLAQFTDIKCCLIVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXX 300
++ A + C + GG+S +Q+ AL D+VV TPGR+ID L
Sbjct: 201 KESAPYLSTVC--VYGGVSYTIQQSALTRGVDVVVGTPGRIID-LIEGRSLKLGEVEYLV 257
Query: 301 XXEADRLLELGFNAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLR--LSADP 358
EAD++L +GF + ++ P KRQ+MLFSATM + +L + L PL L D
Sbjct: 258 LDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQ 317
Query: 359 STKRPATLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAG 418
K + + + L+ + +K K I+F+ TK+ A + + L+
Sbjct: 318 DEKLAEGIKLYAIATTSTSKRTILSDLITVYAKG--GKTIVFTQTKRDADEVSL--ALSN 373
Query: 419 LKAAE-LHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTS 477
A E LHG+++Q QR L FR+ + LVATDVA+RGLDI V VI++ P D +
Sbjct: 374 SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPET 433
Query: 478 YVHRVGRTARAGREGYAVTFVTDNDRSLLKGIAKRAGAKLK 518
+VHR GRT RAG+EG A+ T + + ++ + + G +
Sbjct: 434 FVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFE 474
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 189/381 (49%), Gaps = 13/381 (3%)
Query: 151 FMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLER 210
+ + L+ +L + L Y KP PIQ +P+ +SGRD G A TGSGKT F LP L
Sbjct: 193 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 252
Query: 211 LLFRP--KRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALR 268
+ +P + L++ PTREL Q+HS I K ++ I+C + GG Q L+
Sbjct: 253 IKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELK 312
Query: 269 SMPDIVVATPGRMIDHLRNSMXXXXXXXXXX--XXXEADRLLELGFNAEIHELVRMCPKK 326
+IVV TPGRMID L S EADR+ ++GF +I +++ +
Sbjct: 313 RGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPE 372
Query: 327 RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLL 386
RQT+LFSAT ++ L + L+KP+ + + +T LL
Sbjct: 373 RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELL 432
Query: 387 AMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVD 446
S+ K+++F +++ L + LHG Q R + F+ +
Sbjct: 433 GEWSEK--GKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCN 490
Query: 447 FLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLL 506
L+AT VAARGLD+ ++ V+NF P YVHRVGRT RAGR+G AVTF++++D
Sbjct: 491 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD---- 546
Query: 507 KGIAKRAGAKLKSRIVAEQSI 527
AK A +K+ ++EQ +
Sbjct: 547 ---AKYAPDLVKALELSEQPV 564
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 194/379 (51%), Gaps = 20/379 (5%)
Query: 149 DSFMELNLSRPL---LRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFAL 205
++F +++L L +R C+ Y +PTP+Q IP+ L+ RD+ A TGSGKTAAF
Sbjct: 151 NTFADIDLGDALNLNIRRCK---YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCF 207
Query: 206 PTLERLLF-----RPKRMHAIR--VLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGL 258
P + ++ RP+ A+ +IL+PTRELA Q+H +K + T +K + GG
Sbjct: 208 PIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGT 267
Query: 259 STKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHE 318
Q L DI+VATPGR+ D L + EADR+L++GF +I +
Sbjct: 268 PIHQQLRELERGCDILVATPGRLNDLLERA-RVSMQMIRFLALDEADRMLDMGFEPQIRK 326
Query: 319 LVR---MCPKK-RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXX 374
+V M P+ RQTMLFSAT +I L +S + L+ +T
Sbjct: 327 IVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQ 386
Query: 375 XXXXXNLEAVLLAMCSKT--FTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQ 432
+ LL +T S ++F TK+ A L+ + A +HG+ TQ +
Sbjct: 387 ESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQE 446
Query: 433 RLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREG 492
R AL F+ + LVATDVAARGLDI V V+NF P D+ YVHR+GRT RAG+ G
Sbjct: 447 REVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 506
Query: 493 YAVTFVTDNDRSLLKGIAK 511
A F +N+ L + +A+
Sbjct: 507 IATAFFNENNAQLARSLAE 525
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 194/379 (51%), Gaps = 20/379 (5%)
Query: 149 DSFMELNLSRPL---LRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFAL 205
++F +++L L +R C+ Y +PTP+Q IP+ L+ RD+ A TGSGKTAAF
Sbjct: 151 NTFADIDLGDALNLNIRRCK---YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCF 207
Query: 206 PTLERLLF-----RPKRMHAIR--VLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGL 258
P + ++ RP+ A+ +IL+PTRELA Q+H +K + T +K + GG
Sbjct: 208 PIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGT 267
Query: 259 STKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHE 318
Q L DI+VATPGR+ D L + EADR+L++GF +I +
Sbjct: 268 PIHQQLRELERGCDILVATPGRLNDLLERA-RVSMQMIRFLALDEADRMLDMGFEPQIRK 326
Query: 319 LVR---MCPKK-RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXX 374
+V M P+ RQTMLFSAT +I L +S + L+ +T
Sbjct: 327 IVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQ 386
Query: 375 XXXXXNLEAVLLAMCSKT--FTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQ 432
+ LL +T S ++F TK+ A L+ + A +HG+ TQ +
Sbjct: 387 ESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQE 446
Query: 433 RLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREG 492
R AL F+ + LVATDVAARGLDI V V+NF P D+ YVHR+GRT RAG+ G
Sbjct: 447 REVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 506
Query: 493 YAVTFVTDNDRSLLKGIAK 511
A F +N+ L + +A+
Sbjct: 507 IATAFFNENNAQLARSLAE 525
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 194/379 (51%), Gaps = 20/379 (5%)
Query: 149 DSFMELNLSRPL---LRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFAL 205
++F +++L L +R C+ Y +PTP+Q IP+ L+ RD+ A TGSGKTAAF
Sbjct: 151 NTFADIDLGDALNLNIRRCK---YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCF 207
Query: 206 PTLERLLF-----RPKRMHAIR--VLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGL 258
P + ++ RP+ A+ +IL+PTRELA Q+H +K + T +K + GG
Sbjct: 208 PIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGT 267
Query: 259 STKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHE 318
Q L DI+VATPGR+ D L + EADR+L++GF +I +
Sbjct: 268 PIHQQLRELERGCDILVATPGRLNDLLERA-RVSMQMIRFLALDEADRMLDMGFEPQIRK 326
Query: 319 LVR---MCPKK-RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXX 374
+V M P+ RQTMLFSAT +I L +S + L+ +T
Sbjct: 327 IVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQ 386
Query: 375 XXXXXNLEAVLLAMCSKT--FTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQ 432
+ LL +T S ++F TK+ A L+ + A +HG+ TQ +
Sbjct: 387 ESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQE 446
Query: 433 RLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREG 492
R AL F+ + LVATDVAARGLDI V V+NF P D+ YVHR+GRT RAG+ G
Sbjct: 447 REVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 506
Query: 493 YAVTFVTDNDRSLLKGIAK 511
A F +N+ L + +A+
Sbjct: 507 IATAFFNENNAQLARSLAE 525
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 184/364 (50%), Gaps = 18/364 (4%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
+F ++ RP+L + G +PTPIQ +P+ L+GRD+ G A TGSGKT F LP +
Sbjct: 147 NFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMI- 205
Query: 210 RLLFRPKRMHAIRV------LILTPTRELAVQVHSMIEKL------AQFTDIKCCLIVGG 257
+ + + M I LI+ P+RELA Q + ++E+ A + ++ L +GG
Sbjct: 206 MIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGG 265
Query: 258 LSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIH 317
+ + Q ++ IVVATPGR+ D L EADRL++LGF +I
Sbjct: 266 IDMRSQLEVVKRGVHIVVATPGRLKDMLAKK-KMSLDACRYLTLDEADRLVDLGFEDDIR 324
Query: 318 ELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXX 377
E+ +RQT+LFSATM +I + +L KP+ ++ R
Sbjct: 325 EVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVG----RAGAANLDVIQEVEYV 380
Query: 378 XXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEAL 437
+ V L C + + V+IF K + L G++A +HG Q R A+
Sbjct: 381 KQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAI 440
Query: 438 EQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTF 497
F+ + D LVATDVA++GLD +Q VIN+ P ++ +YVHR+GRT R G+ G A TF
Sbjct: 441 SSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 500
Query: 498 VTDN 501
+ N
Sbjct: 501 INKN 504
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 179/363 (49%), Gaps = 16/363 (4%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTL- 208
+FM++ PLLR + G PTPIQ +P+ LSGRD+ G A TGSGKT F LP +
Sbjct: 98 NFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMII 157
Query: 209 ----ERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQ------FTDIKCCLIVGGL 258
E ++ L++ P+RELA Q + ++E+ + ++ L +GG+
Sbjct: 158 LALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGV 217
Query: 259 STKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHE 318
+ Q ++ IVVATPGR+ D L EADRL++LGF +I
Sbjct: 218 DMRSQLDVVKKGVHIVVATPGRLKDILAKK-KMSLDACRLLTLDEADRLVDLGFEDDIRH 276
Query: 319 LVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXX 378
+ +RQT+LFSATM +I +L KP+ ++ R
Sbjct: 277 VFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVG----RAGAANLDVIQEVEYVK 332
Query: 379 XNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALE 438
+ V L C + T V+IF K + L G++A +HG Q R A+
Sbjct: 333 QEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAIS 392
Query: 439 QFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFV 498
F+ + D LVATDVA++GLD +Q VIN+ P ++ +YVHR+GRT R G+ G A TF+
Sbjct: 393 LFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFI 452
Query: 499 TDN 501
N
Sbjct: 453 NKN 455
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 192/372 (51%), Gaps = 13/372 (3%)
Query: 153 ELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLL 212
+L +S +++A + G K PIQ A + A+ GRD+ G A TG+GKT AF +P +++++
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 213 -FRPK--RMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALRS 269
F K R + L+L PTRELA QV + A D C + GG Q L
Sbjct: 180 KFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRELNY 237
Query: 270 MPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQT 329
D+ V TPGR+ID ++ EAD++L++GF ++ +++ P KRQ+
Sbjct: 238 GIDVAVGTPGRIIDLMKRG-ALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQS 296
Query: 330 MLFSATMTEEINELIKLSLSKPLR--LSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLA 387
M+FSATM I L K L+ PL L D K +T ++ L+
Sbjct: 297 MMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVK 356
Query: 388 MCSKTFTSKVIIFSGTKQAAHRLKIIFGLA-GLKAAELHGNLTQAQRLEALEQFRKQQVD 446
K K I+F+ TK+ A RL FGLA K LHG+++QAQR L FR
Sbjct: 357 EHGKG--GKCIVFTQTKRDADRLA--FGLAKSYKCEALHGDISQAQRERTLAGFRDGNFS 412
Query: 447 FLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLL 506
LVATDVAARGLD+ V VI++ P + ++VHR GRT RAG++G A+ + +
Sbjct: 413 ILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAV 472
Query: 507 KGIAKRAGAKLK 518
K I K G++
Sbjct: 473 KMIEKEVGSRFN 484
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 202/400 (50%), Gaps = 26/400 (6%)
Query: 120 RPXXXXXXXGNAGDNKPYFASSDGTSFH----ADSFMELNLSRPLLRACEALGYSKPTPI 175
RP G + D K +GT F F +L +S R + Y T +
Sbjct: 44 RPLPKDSKIGKSEDGK------NGTVFSRYAGVRKFAQLPISDKTKRGLKDAKYVDMTDV 97
Query: 176 QAACIPLALSGRDICGSAITGSGKTAAFALPTLERL---LFRPKRMHAIRVLILTPTREL 232
Q+A IP AL GRDI G+A TGSGKT AF +P LE+L + P+ + +I++PTREL
Sbjct: 98 QSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRERWSPE--DGVGCIIISPTREL 155
Query: 233 AVQVHSMIEKLAQFTDIKCCLIVGGL-STKVQEVALRSMPDIVVATPGRMIDHLRNSMXX 291
A Q ++ K+ +F L++GG V++ + M +I+V PGR++ H+ +
Sbjct: 156 AAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEM-NILVCAPGRLLQHMDETPNF 214
Query: 292 XXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKP 351
EADR+L+ F ++ ++ PK RQT+LFSAT T+++ +L +LSL P
Sbjct: 215 ECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARLSLRDP 274
Query: 352 --LRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHR 409
+ + A+ T P +L ++ L + S++++F TK+
Sbjct: 275 EYISVHAEAVTATPTSLMQTVMIVPVEKKLDM---LWSFIKTHLNSRILVFLSTKKQVKF 331
Query: 410 LKIIFG--LAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDI-VGVQTV 466
+ F G+ LHG ++Q +R+ QF ++Q L TDV ARGLD V V
Sbjct: 332 VHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQ-SVLFCTDVLARGLDFDKAVDWV 390
Query: 467 INFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLL 506
+ CP D+ SY+HRVGRTAR +G ++ F+T ++ ++
Sbjct: 391 VQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEKMI 430
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 192/371 (51%), Gaps = 13/371 (3%)
Query: 153 ELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLL 212
EL +S +++A + G K PIQ A + A+ GRD+ G A TG+GKT AF +P +++++
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 213 ---FRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALRS 269
+ R L+L PTRELA QV + A D C + GG Q L
Sbjct: 168 KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDY 225
Query: 270 MPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQT 329
D+ V TPGR+ID ++ EAD++L++GF ++ ++ P+KRQ+
Sbjct: 226 GVDVAVGTPGRVIDLMKRG-ALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQS 284
Query: 330 MLFSATMTEEINELIKLSLSKPLR--LSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLA 387
M+FSATM I L K L+ PL L D K +T ++ L+
Sbjct: 285 MMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVT 344
Query: 388 MCSKTFTSKVIIFSGTKQAAHRLKIIFGLA-GLKAAELHGNLTQAQRLEALEQFRKQQVD 446
+K K I+F+ TK+ A RL + LA K LHG+++Q+QR L FR +
Sbjct: 345 EHAKG--GKCIVFTQTKRDADRLS--YALARSFKCEALHGDISQSQRERTLAGFRDGHFN 400
Query: 447 FLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLL 506
LVATDVAARGLD+ V +I++ P + ++VHR GRT RAG++G A+ + + +
Sbjct: 401 ILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAV 460
Query: 507 KGIAKRAGAKL 517
K I + G++
Sbjct: 461 KIIEREVGSRF 471
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 186/354 (52%), Gaps = 6/354 (1%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
+F L+LS ++ + +G+++ T IQA IP + G D+ G+A TGSGKT AF +P +E
Sbjct: 155 TFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVE 214
Query: 210 ---RLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVA 266
R+ F P+ + VL++ PTRELA+Q + + ++L ++ ++GG K +
Sbjct: 215 LLYRVKFTPR--NGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEI 272
Query: 267 LRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKK 326
L +++VATPGR++DHL N+ EADR+LE F ++ +++ + PK
Sbjct: 273 LAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKT 332
Query: 327 RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLL 386
RQT LFSAT + ++ +L ++SL+ P+ + D K L +L
Sbjct: 333 RQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLT 392
Query: 387 AMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVD 446
+ K+++F T ++ +F E+ G + Q +R QF K +
Sbjct: 393 FLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETG 452
Query: 447 FLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARA-GREGYAVTFVT 499
L+ T+VAARGLD V ++ + P + T Y+HRVGRTAR G +G A+ +T
Sbjct: 453 ILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLT 506
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 182/386 (47%), Gaps = 10/386 (2%)
Query: 133 DNKPYFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGS 192
DN+ + + D T+ + F + L R LLR G+ KP+PIQ IP+AL+G DI
Sbjct: 140 DNR--YQTEDVTATKGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILAR 197
Query: 193 AITGSGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCC 252
A G+GKT AF +PTLE++ P+ + I+ +IL PTRELA+Q + ++L+++ I+
Sbjct: 198 AKNGTGKTGAFCIPTLEKI--DPEN-NVIQAVILVPTRELALQTSQVCKELSKYLKIEVM 254
Query: 253 LIVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGF 312
+ GG S + + L ++V TPGR++D L EAD+LL + F
Sbjct: 255 VTTGGTSLRDDIMRLYQPVHLLVGTPGRILD-LAKKGVCVLKDCAMLVMDEADKLLSVEF 313
Query: 313 NAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXX 372
I EL++ P+ RQ ++FSAT + L KP ++ TL
Sbjct: 314 QPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPYIINL----MDQLTLMGVTQY 369
Query: 373 XXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQ 432
L + SK ++ IIF + L G +H + Q
Sbjct: 370 YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDH 429
Query: 433 RLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREG 492
R FR LV TD+ RG+DI V VINF PR SY+HRVGR+ R G G
Sbjct: 430 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLG 489
Query: 493 YAVTFVTDNDRSLLKGIAKRAGAKLK 518
AV VT DR + + G ++K
Sbjct: 490 LAVNLVTYEDRFKMYQTEQELGTEIK 515
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 190/375 (50%), Gaps = 29/375 (7%)
Query: 154 LNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLLF 213
LN+ + LLR ++A +P AL GRDI A TG+GKT AF +P ++RL
Sbjct: 26 LNVLKSLLRN-----------VRAVLVP-ALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 73
Query: 214 RPKRMHAIR-------VLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVA 266
A R L+L PTRELA QV I++ A + C + GG+S +Q+ A
Sbjct: 74 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVSYTIQQSA 131
Query: 267 LRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKK 326
L D+VV TPGR+ID L EAD++L +GF + ++ P K
Sbjct: 132 LTRGVDVVVGTPGRIID-LIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTK 190
Query: 327 RQTMLFSATMTEEINELIKLSLSKPLR--LSADPSTKRPATLTXXXXXXXXXXXXNLEAV 384
RQ+MLFSATM + +L + L PL L D K + + +
Sbjct: 191 RQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSD 250
Query: 385 LLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAE-LHGNLTQAQRLEALEQFRKQ 443
L+ + +K K I+F+ TK+ A + + L+ A E LHG+++Q QR L FR+
Sbjct: 251 LITVYAKG--GKTIVFTQTKRDADEVSL--ALSNSIATEALHGDISQHQRERTLNAFRQG 306
Query: 444 QVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDR 503
+ LVATDVA+RGLDI V VI++ P D ++VHR GRT RAG+EG A+ T + +
Sbjct: 307 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQK 366
Query: 504 SLLKGIAKRAGAKLK 518
++ + + G +
Sbjct: 367 RTVRSLERDVGCHFE 381
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 179/381 (46%), Gaps = 8/381 (2%)
Query: 138 FASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGS 197
+ ++D T+ + F + L R LL+ G+ KP+PIQ IP+AL+G DI A G+
Sbjct: 113 YQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGT 172
Query: 198 GKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGG 257
GKT AF +P LE++ P + I+ +IL PTRELA+Q + ++L+++ +I+ + GG
Sbjct: 173 GKTGAFCIPVLEKI--DPNN-NVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGG 229
Query: 258 LSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIH 317
S + + L ++V TPGR++D L EAD+LL F +
Sbjct: 230 TSLRDDIMRLHQPVHLLVGTPGRILD-LTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLE 288
Query: 318 ELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXX 377
EL++ P+ RQ ++FSAT + L KP ++ TL
Sbjct: 289 ELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINL----MDQLTLMGVTQYYAFVE 344
Query: 378 XXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEAL 437
L + SK ++ IIF + L G +H + Q R
Sbjct: 345 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVF 404
Query: 438 EQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTF 497
+FR LV TD+ RG+DI V VINF PR SY+HRVGR+ R G G AV
Sbjct: 405 HEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNL 464
Query: 498 VTDNDRSLLKGIAKRAGAKLK 518
VT DR + + G ++K
Sbjct: 465 VTYEDRFKMYQTEQELGTEIK 485
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 179/381 (46%), Gaps = 8/381 (2%)
Query: 138 FASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGS 197
+ ++D T+ + F + L R LL+ G+ KP+PIQ IP+AL+G DI A G+
Sbjct: 113 YQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGT 172
Query: 198 GKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGG 257
GKT AF +P LE++ P + I+ +IL PTRELA+Q + ++L+++ +I+ + GG
Sbjct: 173 GKTGAFCIPVLEKI--DPNN-NVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGG 229
Query: 258 LSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIH 317
S + + L ++V TPGR++D L EAD+LL F +
Sbjct: 230 TSLRDDIMRLHQPVHLLVGTPGRILD-LTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLE 288
Query: 318 ELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXX 377
EL++ P+ RQ ++FSAT + L KP ++ TL
Sbjct: 289 ELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINL----MDQLTLMGVTQYYAFVE 344
Query: 378 XXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEAL 437
L + SK ++ IIF + L G +H + Q R
Sbjct: 345 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVF 404
Query: 438 EQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTF 497
+FR LV TD+ RG+DI V VINF PR SY+HRVGR+ R G G AV
Sbjct: 405 HEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNL 464
Query: 498 VTDNDRSLLKGIAKRAGAKLK 518
VT DR + + G ++K
Sbjct: 465 VTYEDRFKMYQTEQELGTEIK 485
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 37/357 (10%)
Query: 151 FMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLER 210
+ + L+ +L + L Y KP PIQA +P+ +SGRD G A TGSGKT F LP L
Sbjct: 398 WHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 457
Query: 211 LLFRP--KRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALR 268
+ +P + L++ PTREL Q++S I K ++ I C + GG Q L+
Sbjct: 458 IKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELK 517
Query: 269 SMPDIVVATPGRMIDHLRNSMXXXXXXXXXX--XXXEADRLLELGFNAEIHELVRMCPKK 326
+IVV TPGRMID L S EADR+ ++GF +I +V+
Sbjct: 518 RGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPD 577
Query: 327 RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLL 386
RQT+LFSAT ++ L + L+KP+ + + +T + LL
Sbjct: 578 RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESERF---SRLL 634
Query: 387 AMCSKTF-TSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQV 445
+ + + KV++F +++ +++ F+
Sbjct: 635 ELLGEWYEKGKVLVFVRSQE-----------------------------KSISDFKSDVC 665
Query: 446 DFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDND 502
+ L+AT VAARGLD+ ++ V+NF P YVHRVGRT RAGR+G AVTF++++D
Sbjct: 666 NLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 722
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 189/368 (51%), Gaps = 21/368 (5%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
S +E LS ++ A + TP+QAA IPL S +D+ A TGSGKT AF +P +E
Sbjct: 17 SDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE 76
Query: 210 ---RLLFRPKRMHAIRVLILTPTRELAVQVHSMIEK-LAQFTDIKCCLIVGGLSTKV-QE 264
R P + H + +I++PTREL+ Q++++ + ++ ++ L+VGG K +
Sbjct: 77 ILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMK 136
Query: 265 VALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCP 324
+ ++++ TPGR+ D + EADRLLE+GF +++ ++ P
Sbjct: 137 IIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLP 196
Query: 325 KKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAV 384
K+R+T LFSAT TE + EL K L P+R+ +K ++ +LE +
Sbjct: 197 KQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESS--QQLTNSKTPSGLHLEYM 254
Query: 385 ----------LLAMCSKTFTSKVIIFSGTKQAAHRLKIIFG-LAGLKAAEL---HGNLTQ 430
L+ + K K+I+F T + ++ + LK+ L HG++ Q
Sbjct: 255 ECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQ 314
Query: 431 AQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGR 490
R +AL F K L+ TDVAARGLDI G+ V+ + P+D + HR GRTAR GR
Sbjct: 315 NARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGR 374
Query: 491 EGYAVTFV 498
+G A+ F+
Sbjct: 375 QGRAIVFL 382
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 175/361 (48%), Gaps = 13/361 (3%)
Query: 151 FMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLER 210
F + LS L+ E G+ T +Q A +PL L G+DI A TG+GKT AF LP++E
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 211 LLFRP-----KRMHAIRVLILTPTRELAVQVHSMIEKLAQF-TDIKCCLIVGGLSTKVQE 264
++ P R I VL++ PTRELA Q + L ++ I +++GG ++
Sbjct: 142 VIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQ 201
Query: 265 VALRSMP-DIVVATPGRMIDHLRNS--MXXXXXXXXXXXXXEADRLLELGFNAEIHELVR 321
L+ P I+VATPGR+ DH+ N+ EAD LL++GF EI ++
Sbjct: 202 RRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIA 261
Query: 322 MCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNL 381
PK+RQT LFSAT+++E+ ++ ++L + T
Sbjct: 262 AVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRH 321
Query: 382 EAVLLAMCSKTFTS----KVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEAL 437
++L + K T KVIIF T + + G L E+H Q+ R
Sbjct: 322 FSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVS 381
Query: 438 EQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTF 497
++FRK + LV +DV+ARG+D V V+ P D Y+HR+GRT R G+EG V
Sbjct: 382 DEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLL 441
Query: 498 V 498
+
Sbjct: 442 L 442
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 176/381 (46%), Gaps = 8/381 (2%)
Query: 138 FASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGS 197
+ + D T+ + F + L R LL G+ +P+PIQ IP+AL+GRDI A G+
Sbjct: 120 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGT 179
Query: 198 GKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGG 257
GKTAAF +P LE++ + + I+ +I+ PTRELA+Q + ++L + I+ + GG
Sbjct: 180 GKTAAFCIPVLEKI---DQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGG 236
Query: 258 LSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIH 317
S K + L ++V TPGR++D L EAD+LL F +
Sbjct: 237 TSLKDDIMRLYQPVHLLVGTPGRILD-LTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVE 295
Query: 318 ELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXX 377
L+ P+ RQ ++FSAT + + L+ P ++ TL
Sbjct: 296 HLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINL----MDELTLKGITQFYAFVE 351
Query: 378 XXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEAL 437
L + SK ++ IIF + L G +H + Q R
Sbjct: 352 ERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 411
Query: 438 EQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTF 497
FR LV TD+ RG+DI V VINF P++ +Y+HRVGR+ R G G AV
Sbjct: 412 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNL 471
Query: 498 VTDNDRSLLKGIAKRAGAKLK 518
+T DR L I + G ++K
Sbjct: 472 ITYEDRFNLYRIEQELGTEIK 492
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 176/381 (46%), Gaps = 8/381 (2%)
Query: 138 FASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGS 197
+ + D T+ + F + L R LL G+ +P+PIQ IP+AL+GRDI A G+
Sbjct: 120 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGT 179
Query: 198 GKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGG 257
GKTAAF +P LE++ + + I+ +I+ PTRELA+Q + ++L + I+ + GG
Sbjct: 180 GKTAAFCIPVLEKI---DQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGG 236
Query: 258 LSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIH 317
S K + L ++V TPGR++D L EAD+LL F +
Sbjct: 237 TSLKDDIMRLYQPVHLLVGTPGRILD-LTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVE 295
Query: 318 ELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXX 377
L+ P+ RQ ++FSAT + + L+ P ++ TL
Sbjct: 296 HLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINL----MDELTLKGITQFYAFVE 351
Query: 378 XXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEAL 437
L + SK ++ IIF + L G +H + Q R
Sbjct: 352 ERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 411
Query: 438 EQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTF 497
FR LV TD+ RG+DI V VINF P++ +Y+HRVGR+ R G G AV
Sbjct: 412 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNL 471
Query: 498 VTDNDRSLLKGIAKRAGAKLK 518
+T DR L I + G ++K
Sbjct: 472 ITYEDRFNLYRIEQELGTEIK 492
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 213/447 (47%), Gaps = 76/447 (17%)
Query: 146 FHADSFMELNLSRPLL-RACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFA 204
F + SF L L L + E +G+ PT +QA IP+ LSGRD+ +A TG+GKT A+
Sbjct: 26 FASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYL 85
Query: 205 LPTLERLL-FRPK--RMHAIRVLILTPTRELAVQVHSMIEKLAQ-FTDIKCCLIVGGLST 260
P + L PK R H L++ PTREL +QV+ +EKL F I ++GG
Sbjct: 86 APLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKK 145
Query: 261 KVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELV 320
++ LR I++ATPGR++DHL+N+ EAD +LELG+ EI +++
Sbjct: 146 AKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQII 205
Query: 321 RM--------------CPK--KRQTMLFSATMTEEINELIK------------------- 345
++ PK ++Q +L SAT+ +++N+L K
Sbjct: 206 KLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQN 265
Query: 346 LSLSKP-------------LRLSADPSTKR---PATLTXXXXXX-XXXXXXNLEAVLLAM 388
LS+ P + SA+P ++ P+ L L +VL +
Sbjct: 266 LSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNL 325
Query: 389 CSKTFTSKVIIFSGTKQAA---HRLKIIF-----------GLAGL----KAAELHGNLTQ 430
+ + KV++F T+ A + L F G L K LHG++ Q
Sbjct: 326 FEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSMEQ 385
Query: 431 AQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGR 490
R A F+ ++ L++TDVAARGLD V+ +I + CP + T YVHRVGRTAR G
Sbjct: 386 EDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGE 445
Query: 491 EGYAVTFVTDNDRSLLKGIAKRAGAKL 517
+G A+ F+ + LK + K+ GA L
Sbjct: 446 KGEALLFLQPIEIDYLKEL-KKHGASL 471
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 178/358 (49%), Gaps = 13/358 (3%)
Query: 151 FMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLER 210
F + LS L+A + G+ T +Q A +P+ L G+D+ A TG+GKT AF LP +E
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 211 LLFRP-----KRMHAIRVLILTPTRELAVQVHSMIEKLAQF-TDIKCCLIVGGLSTKVQE 264
++ P R I VL++ PTRELA Q + L ++ I +++GG ++
Sbjct: 444 VIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQ 503
Query: 265 VALRSMP-DIVVATPGRMIDHLRNS--MXXXXXXXXXXXXXEADRLLELGFNAEIHELVR 321
+++ P I+VATPGR+ DH+ N+ EAD LL++GF +I ++
Sbjct: 504 RRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIA 563
Query: 322 MCPKKRQTMLFSATMTEEINELIKLSLSKP---LRLSADPSTKRPATLTXXXXXXXXXXX 378
PK+RQT LFSAT+ EE+ ++ ++L + + + S + +T
Sbjct: 564 AVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRH 623
Query: 379 XNLEAVLLA-MCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEAL 437
+L VLL + KVIIF T + + L E+H Q+ R
Sbjct: 624 FSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVS 683
Query: 438 EQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAV 495
++FRK + LV +DV+ARG+D V V+ P D Y+HR+GRT R G+EG V
Sbjct: 684 DEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGV 741
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 179/372 (48%), Gaps = 12/372 (3%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
SF ++ ++ +LR GY KP+ IQ + L GRD+ A +G+GKT+ A+ +
Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQ 82
Query: 210 RLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALRS 269
+ ++ ++VL+L+P+RELA Q I+ + T+I+ +GG S L
Sbjct: 83 IVNISSRK---VQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLER 139
Query: 270 MPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQT 329
V TPGR+ D ++ E+D +L G +I+++ R P Q
Sbjct: 140 GVHAVSGTPGRVYDMIKRG-SLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQV 198
Query: 330 MLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAMC 389
L SAT+ +EI E+ + ++ P+R+ +P LT E +C
Sbjct: 199 CLISATLPQEILEMTEKFMTDPVRILV-----KPDELTLEGIKQYYVDVDKEEWKFDTLC 253
Query: 390 ---SKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVD 446
+ ++ IIF T+Q L + + +HG+ Q +R + + QFR +
Sbjct: 254 DLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSR 313
Query: 447 FLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLL 506
L+A+DV ARG+D+ V VIN+ P + Y+HR+GR R GREG A+ FV +D L
Sbjct: 314 VLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDL 373
Query: 507 KGIAKRAGAKLK 518
K I + G K++
Sbjct: 374 KDIERHYGTKIR 385
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 182/378 (48%), Gaps = 15/378 (3%)
Query: 137 YFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITG 196
+F S D +SF + L LLR A G+ KP+ IQ I G D+ A +G
Sbjct: 30 FFTSYDDVH---ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
Query: 197 SGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVG 256
+GKTA F L++L F + A L+L PTRELA Q+ ++ L + +K VG
Sbjct: 87 TGKTATFCSGVLQQLDFSLIQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 143
Query: 257 GLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 316
G S + + L++ +VV TPGR+ D L+ EAD +L GF +I
Sbjct: 144 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ-SLRADNIKMFVLDEADEMLSRGFKDQI 202
Query: 317 HELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXX 376
+++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 203 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRDE-LTLEGIKQFYV 257
Query: 377 XXXNLEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQR 433
E L +C T ++ +IF T++ L + HG++ Q R
Sbjct: 258 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 317
Query: 434 LEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGY 493
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 318 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 377
Query: 494 AVTFVTDNDRSLLKGIAK 511
A+ FVT +D +L I K
Sbjct: 378 AINFVTRDDERMLFDIQK 395
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 182/378 (48%), Gaps = 15/378 (3%)
Query: 137 YFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITG 196
+F S D +SF + L LLR A G+ KP+ IQ I G D+ A +G
Sbjct: 20 FFTSYDDVH---ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 76
Query: 197 SGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVG 256
+GKTA F L++L F + A L+L PTRELA Q+ ++ L + +K VG
Sbjct: 77 TGKTATFCSGVLQQLDFSLIQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 133
Query: 257 GLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 316
G S + + L++ +VV TPGR+ D L+ EAD +L GF +I
Sbjct: 134 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ-SLRADNIKMFVLDEADEMLSRGFKDQI 192
Query: 317 HELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXX 376
+++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 193 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRDE-LTLEGIKQFYV 247
Query: 377 XXXNLEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQR 433
E L +C T ++ +IF T++ L + HG++ Q R
Sbjct: 248 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 307
Query: 434 LEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGY 493
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 308 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 367
Query: 494 AVTFVTDNDRSLLKGIAK 511
A+ FVT +D +L I K
Sbjct: 368 AINFVTRDDERMLFDIQK 385
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 172 bits (437), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 180/373 (48%), Gaps = 15/373 (4%)
Query: 137 YFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITG 196
+F S D +SF + L LLR A G+ KP+ IQ I G D+ A +G
Sbjct: 30 FFTSYDDVH---ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
Query: 197 SGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVG 256
+GKTA F L++L F + A L+L PTRELA Q+ ++ L + +K VG
Sbjct: 87 TGKTATFCSGVLQQLDFSLIQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 143
Query: 257 GLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 316
G S + + L++ +VV TPGR+ D L+ EAD +L GF +I
Sbjct: 144 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ-SLRADNIKMFVLDEADEMLSRGFKDQI 202
Query: 317 HELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXX 376
+++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 203 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRDE-LTLEGIKQFYV 257
Query: 377 XXXNLEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQR 433
E L +C T ++ +IF T++ L + HG++ Q R
Sbjct: 258 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 317
Query: 434 LEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGY 493
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 318 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 377
Query: 494 AVTFVTDNDRSLL 506
A+ FVT +D +L
Sbjct: 378 AINFVTRDDERML 390
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 187/384 (48%), Gaps = 20/384 (5%)
Query: 147 HADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALP 206
+ ++ + +S PL +A G PIQA+ + L G D+ G A TG GKT AF LP
Sbjct: 94 NPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLP 153
Query: 207 TLERLLFRP----KRMHAIR---VLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLS 259
LE L+ P ++M R VL+L PTRELA QV + + + C + GG S
Sbjct: 154 ILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDS 213
Query: 260 TKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHEL 319
VQE L+ DIVV TPGR+ DH+ EAD +L +GF ++ +
Sbjct: 214 YPVQEGKLKRGVDIVVGTPGRIKDHIERQ-NLDFSYLQFRVLDEADEMLRMGFVEDVELI 272
Query: 320 VRMC--PKKRQTMLFSATMTEEINELIKLSLS---KPLRLSADPSTKRPATLTXXXXXXX 374
+ K QT+LFSAT+ + + L K + L + K ++
Sbjct: 273 LGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCN 332
Query: 375 XXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRL 434
L +++ S + IIF+ TK L + L G +A LHG + Q+QR
Sbjct: 333 KAAMARLIPDIISCYSSG--GQTIIFAETKVQVSELSGL--LDGSRA--LHGEIPQSQRE 386
Query: 435 EALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYA 494
L FR + LVAT+VAARGLDI VQ +I PR++ +Y+HR GRT RAG G A
Sbjct: 387 VTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVA 446
Query: 495 VTFVTDNDRSLLKGIAKRAGAKLK 518
VT D+ +S + I K AG K +
Sbjct: 447 VTLY-DSRKSSVSRIEKEAGIKFE 469
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 184/379 (48%), Gaps = 10/379 (2%)
Query: 144 TSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAF 203
H+ F + L LLRA G+ P+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
Query: 204 ALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFT-DIKCCLIVGGLSTKV 262
L TL+++ P ++ A L+L TRELA Q+ + + + + D K + GG++ K+
Sbjct: 101 VLSTLQQIEPSPGQVSA---LVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKI 157
Query: 263 QEVALRS-MPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLE-LGFNAEIHELV 320
+ L++ P IVV TPGR++ R E D++LE L ++ E+
Sbjct: 158 HKDLLKNECPHIVVGTPGRVLALAREK-DLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
Query: 321 RMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXN 380
+M P +Q M+FSAT+++EI + K + P+ + D K TL
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK--LTLHGLVQHYIKLSEME 274
Query: 381 LEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQF 440
L + ++V+IF + A L + + +H ++Q +RL + F
Sbjct: 275 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSF 334
Query: 441 RKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTD 500
++ LVATD+ RG+DI V VIN+ P +Y+HRVGR R G +G A+TFV
Sbjct: 335 KEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 394
Query: 501 -NDRSLLKGIAKRAGAKLK 518
+D +L + +R +K
Sbjct: 395 ASDSEVLNQVQERFEVDIK 413
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 184/379 (48%), Gaps = 10/379 (2%)
Query: 144 TSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAF 203
H+ F + L LLRA G+ P+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
Query: 204 ALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFT-DIKCCLIVGGLSTKV 262
L TL+++ P ++ A L+L TRELA Q+ + + + + D K + GG++ K+
Sbjct: 101 VLSTLQQIEPSPGQVSA---LVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKI 157
Query: 263 QEVALRS-MPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLE-LGFNAEIHELV 320
+ L++ P IVV TPGR++ R E D++LE L ++ E+
Sbjct: 158 HKDLLKNECPHIVVGTPGRVLALAREK-DLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
Query: 321 RMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXN 380
+M P +Q M+FSAT+++EI + K + P+ + D K TL
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK--LTLHGLVQHYIKLSEME 274
Query: 381 LEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQF 440
L + ++V+IF + A L + + +H ++Q +RL + F
Sbjct: 275 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSF 334
Query: 441 RKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTD 500
++ LVATD+ RG+DI V VIN+ P +Y+HRVGR R G +G A+TFV
Sbjct: 335 KEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 394
Query: 501 -NDRSLLKGIAKRAGAKLK 518
+D +L + +R +K
Sbjct: 395 ASDSEVLNQVQERFEVDIK 413
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 183/378 (48%), Gaps = 15/378 (3%)
Query: 137 YFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITG 196
+F S D +SF + L LLR A G+ KP+ IQ I G D+ A +G
Sbjct: 30 FFTSYDEVH---ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
Query: 197 SGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVG 256
+GKTA F L++L + + A L+L PTRELA Q+ ++ L + +K VG
Sbjct: 87 TGKTATFCSGVLQQLDYALLQCQA---LVLAPTRELAQQIEKVMRALGDYQGVKVHACVG 143
Query: 257 GLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 316
G S + + L++ +VV TPGR+ D LR EAD +L GF +I
Sbjct: 144 GTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDCIKMFVLDEADEMLSRGFKDQI 202
Query: 317 HELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXX 376
+++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 203 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRDE-LTLEGIKQFYV 257
Query: 377 XXXNLEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQR 433
+ L +C T ++ +IF T++ L + HG++ Q R
Sbjct: 258 NVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 317
Query: 434 LEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGY 493
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 318 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 377
Query: 494 AVTFVTDNDRSLLKGIAK 511
A+ FVT +D+ +L I K
Sbjct: 378 AINFVTLDDQRMLFDIQK 395
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 176/367 (47%), Gaps = 12/367 (3%)
Query: 148 ADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPT 207
DSF + L LLR A G+ KP+ IQ I G D+ A +G+GKTA F
Sbjct: 40 CDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGV 99
Query: 208 LERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVAL 267
L++L + A L+L PTRELA Q+ ++ L + +K VGG S + + L
Sbjct: 100 LQQLDISLVQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVL 156
Query: 268 RSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKR 327
+S +VV TPGR+ D LR EAD +L GF +I+++ ++ P K
Sbjct: 157 QSGVHVVVGTPGRVFDLLRRQ-SLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKV 215
Query: 328 QTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLA 387
Q +FSATM E E+ + ++KP+R+ KR LT E L
Sbjct: 216 QVGVFSATMPPEALEITRKFMNKPVRILV----KRDE-LTLEGIKQFYVNVDKEEWKLET 270
Query: 388 MCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQ 444
+C T ++ +IF T++ L + HG++ Q R + +FR
Sbjct: 271 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 330
Query: 445 VDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRS 504
L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G A+ F+T D
Sbjct: 331 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDER 390
Query: 505 LLKGIAK 511
++ I +
Sbjct: 391 MMADIQR 397
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 179/359 (49%), Gaps = 12/359 (3%)
Query: 151 FMELN--LSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTL 208
F EL LS ++ A + G+ TP+QA IP S +D+ A TGSGKT AF LP +
Sbjct: 16 FSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFI 75
Query: 209 E---RLLFRPKRMHAIRVLILTPTRELAVQVHSMIEK-LAQFTDIKCCLIVGGLSTKVQE 264
E R P + H + +I++PTREL+ Q+H + E ++ ++ L+VGG +
Sbjct: 76 EIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADM 135
Query: 265 VALRS-MPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMC 323
L ++++ TPGR+ D ++ EADRLL++GF +++ ++
Sbjct: 136 NTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRL 195
Query: 324 PKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEA 383
PK+R+T LFSAT T+ + +L K L + + + +K T + +
Sbjct: 196 PKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESK-SKTSSGLYCEYLKCEADQKSS 254
Query: 384 VLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFG----LAGLKAAELHGNLTQAQRLEALEQ 439
L+ + + K+++F T ++ L + HG + Q R AL
Sbjct: 255 QLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALAS 314
Query: 440 FRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFV 498
F + L+ TDVAARGLDI G+ V+ + P+D ++HRVGRTAR R+G A+ F+
Sbjct: 315 FTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFL 373
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 185/389 (47%), Gaps = 25/389 (6%)
Query: 132 GDNKPYFASSDGTSFHADSFM------ELNLSRPLLRACEALGYSKPTPIQAACIPLALS 185
G +K +D T DS++ LS L+A + GY T +Q A +P+ L
Sbjct: 297 GFDKENVIEADKTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILK 356
Query: 186 GRDICGSAITGSGKTAAFALPTLERLLFRP-----KRMHAIRVLILTPTRELAVQVHSMI 240
G+D+ A TG+GKT AF LP++E ++ P + I L++ PTRELA Q +
Sbjct: 357 GKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEA 416
Query: 241 EKLAQFT-DIKCCLIVGGLSTKVQEVALRSMP-DIVVATPGRMIDHLRNS--MXXXXXXX 296
L ++ I +++GG +++ +++ P I+VATPGR+ DH+ N+
Sbjct: 417 NTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGV 476
Query: 297 XXXXXXEADRLLELGFNAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSA 356
EAD LL++GF +I ++ PK+RQT LFSAT+ EE+ ++ ++L +
Sbjct: 477 KVLVLDEADHLLDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFV- 535
Query: 357 DPSTKRPATLTXXXXXXXXXXXXNLE-------AVLLAMCSKTFTSKVIIFSGTKQAAHR 409
+ T+ +L+ +L KVI+F T
Sbjct: 536 --NCVHEGTIETHQQVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKL 593
Query: 410 LKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINF 469
+ + G L E+H Q+ R +FRK + LV +DV+ARG+D V V+
Sbjct: 594 VADLLGELNLNVREIHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQV 653
Query: 470 ACPRDLTSYVHRVGRTARAGREGYAVTFV 498
P+D Y+HR+GRT R G+EG + +
Sbjct: 654 GLPKDREQYIHRLGRTGRKGKEGEGILLL 682
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 181/378 (47%), Gaps = 20/378 (5%)
Query: 137 YFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITG 196
+F S D +SF + L LLR G+ KP+ IQ I G D+ A +G
Sbjct: 30 FFTSYDDVH---ESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSG 81
Query: 197 SGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVG 256
+GKTA F L++L F + A L+L PTRELA Q+ ++ L + +K VG
Sbjct: 82 TGKTATFCSGVLQQLDFSLIQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 138
Query: 257 GLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 316
G S + + L++ +VV TPGR+ D L+ EAD +L GF +I
Sbjct: 139 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ-SLRADNIKMFVLDEADEMLSRGFKDQI 197
Query: 317 HELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXX 376
+++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 198 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRDE-LTLEGIKQFYV 252
Query: 377 XXXNLEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQR 433
E L +C T ++ +IF T++ L + HG++ Q R
Sbjct: 253 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 312
Query: 434 LEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGY 493
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 313 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 372
Query: 494 AVTFVTDNDRSLLKGIAK 511
A+ FVT +D +L I K
Sbjct: 373 AINFVTRDDERMLFDIQK 390
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 182/388 (46%), Gaps = 13/388 (3%)
Query: 133 DNKPYFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGS 192
D+K F ++DG SF ++ + +LR G+ KP+ IQ + L GRD+
Sbjct: 20 DDKLVFETTDGIE-PITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQ 78
Query: 193 AITGSGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCC 252
A +G+GKT+ AL + + + + A LIL+PTRELA Q I+ + +I+
Sbjct: 79 AQSGTGKTSMIALSVCQVVDTSSREVQA---LILSPTRELATQTEKTIQAIGLHANIQAH 135
Query: 253 LIVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGF 312
+GG S L +V TPGR+ D ++ E+D +L GF
Sbjct: 136 ACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRR-SLRTRAIKLLILDESDEMLSRGF 194
Query: 313 NAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXX 372
+I+++ R P Q L SAT+ EI E+ +++P+++ KR LT
Sbjct: 195 KDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILV----KRDE-LTLEGIK 249
Query: 373 XXXXXXXNLEAVLLAMCS--KTFT-SKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLT 429
E +C T T ++ +IF TK+ L + +HG++
Sbjct: 250 QFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMP 309
Query: 430 QAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAG 489
Q +R + +FR L+ TDV ARG+D+ V VIN+ P + Y+HR+GR+ R G
Sbjct: 310 QKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG 369
Query: 490 REGYAVTFVTDNDRSLLKGIAKRAGAKL 517
R+G A+ FV +D +L+ I + ++
Sbjct: 370 RKGVAINFVKSDDIKILRDIEQYYSTQI 397
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 182/378 (48%), Gaps = 20/378 (5%)
Query: 137 YFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITG 196
+F S D +SF + L LLR G+ KP+ IQ I G D+ A +G
Sbjct: 30 FFTSYDEVH---ESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSG 81
Query: 197 SGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVG 256
+GKTA F L++L + + A L+L PTRELA Q+ ++ L + +K VG
Sbjct: 82 TGKTATFCSGVLQQLDYALLQCQA---LVLAPTRELAQQIEKVMRALGDYQGVKVHACVG 138
Query: 257 GLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 316
G S + + L++ +VV TPGR+ D LR EAD +L GF +I
Sbjct: 139 GTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDCIKMFVLDEADEMLSRGFKDQI 197
Query: 317 HELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXX 376
+++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 198 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRDE-LTLEGIKQFYV 252
Query: 377 XXXNLEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQR 433
+ L +C T ++ +IF T++ L + HG++ Q R
Sbjct: 253 NVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 312
Query: 434 LEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGY 493
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 313 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 372
Query: 494 AVTFVTDNDRSLLKGIAK 511
A+ FVT +D+ +L I K
Sbjct: 373 AINFVTLDDQRMLFDIQK 390
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 198/437 (45%), Gaps = 77/437 (17%)
Query: 146 FHADSFMELNLSRPLL-RACEALGYSKPTPIQAACIPLA-LSGRDICGSAITGSGKTAAF 203
F A S M L+ PLL ++ L + +PT IQ AC +A G+D+ G+A TGSGKT AF
Sbjct: 189 FSAWSSMRLH---PLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAF 245
Query: 204 ALPTLERLL---FRPKRMHAI--------------RVLILTPTRELAVQVHSMIEKLAQF 246
LP L+RLL + +++A+ R LI+TPTRELA+QV +E A+
Sbjct: 246 GLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKN 305
Query: 247 TDIKCCLIVGGLSTKVQEVALRSMPDIVVATPGRMIDHLR--NSMXXXXXXXXXXXXXEA 304
+K IVGG+ ++ QE L+ P+IVVATPGR+ + + EA
Sbjct: 306 LSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEA 365
Query: 305 DRLLELGFNAEIHELVRMCP------------------------KKRQTMLFSATMT--- 337
DR++E G E+ ++ + P KKRQT +FSAT+
Sbjct: 366 DRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSS 425
Query: 338 ------------------EEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXX 379
E+N + LS +R D T T
Sbjct: 426 DFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMR---DNVAIIDLTTTSILAPKIEESFI 482
Query: 380 NLE-----AVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRL 434
E A L + S + I+F + + + + GL L + Q RL
Sbjct: 483 KCEEKEKDAYLYYILSVHGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARL 542
Query: 435 EALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYA 494
+++++FR + L+ATD+ ARG+DI V+T+I++ P YVHR GRTARA +G +
Sbjct: 543 KSIDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCS 602
Query: 495 VTFVTDNDRSLLKGIAK 511
+ + N+ S + K
Sbjct: 603 IALIEPNETSKFYTLCK 619
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 158/316 (50%), Gaps = 4/316 (1%)
Query: 151 FMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLER 210
F + N +L A LG+++PTPIQA P+AL GRD+ G A TGSGKT A+ LP L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 211 LLFRPK--RMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALR 268
+ +P+ + VLIL PTRELAVQ+ K + ++ I GG Q LR
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 269 SMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQ 328
+IV+ATPGR+ID L EADR+L++GF +I ++V RQ
Sbjct: 287 RGVEIVIATPGRLIDML-ECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 345
Query: 329 TMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAM 388
T+L+SAT E+ L + L P + ST A + +L +
Sbjct: 346 TLLWSATWPREVETLARQFLRDPYKAIIG-STDLKANQSINQVIEIVPTPEKYNRLLTLL 404
Query: 389 CSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFL 448
SK++IF TK+ ++ + G A +HG+ TQ++R L +F+ + +
Sbjct: 405 KQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIM 464
Query: 449 VATDVAARGLDIVGVQ 464
ATDVAARGL G++
Sbjct: 465 TATDVAARGLVSSGIR 480
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 177/355 (49%), Gaps = 14/355 (3%)
Query: 160 LLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLLFRPKRMH 219
+LR LG+ +PTPIQ IP+ LSGR+ A TGSGKT AF P L +L RP
Sbjct: 152 ILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLK-RPS-TD 209
Query: 220 AIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALRSMPDIVVATPG 279
IR +IL+P RELA Q +KL + ++ L+ L L D++++TP
Sbjct: 210 GIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWC--DVLISTPM 267
Query: 280 RMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQT-MLFSATMTE 338
R+ ++ + E+D+L E +I +V+ C LFSAT+ +
Sbjct: 268 RLKRAIK-AKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPD 326
Query: 339 EINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAM---CSKTFTS 395
+ EL + + +R+ K A+ T E LLA+ +++
Sbjct: 327 SVEELARSIMHDAVRVII--GRKNTASETVKQKLVFAGSE---EGKLLALRQSFAESLNP 381
Query: 396 KVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAA 455
V+IF +K+ A L ++A +H +L +R A++QFR + L+ATDV A
Sbjct: 382 PVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIA 441
Query: 456 RGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKGIA 510
RG+D G+ VIN+ P ++Y+HR+GR+ RAGR G A+TF T+ D L+ IA
Sbjct: 442 RGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIA 496
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 176/370 (47%), Gaps = 31/370 (8%)
Query: 168 GYSKPTPIQA--ACIPLALSGRDICGSAITGSGKTAAFALPTLERLLFRP-----KRMHA 220
G P P++ IPL L RD+ G + TGSGKTAAF LP L + P +
Sbjct: 219 GSKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEG 278
Query: 221 IRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALRSMPDIVVATPGR 280
L++ PTRELA Q+ K +++ K I G S + Q + L +IV+ATPGR
Sbjct: 279 PYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGR 338
Query: 281 MIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPKK-------------- 326
++D L EADR++++ F ++ E++ + P
Sbjct: 339 LLDCLERRY-VVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEK 397
Query: 327 ---RQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEA 383
R T +FSATM + L + L P+ ++ +TK +T +
Sbjct: 398 KIYRTTYMFSATMLLSVERLARKFLRNPVVVTIGETTK---FITQQVIMTKESDKFSRLK 454
Query: 384 VLLAMCSKTFTSKVIIFSGTKQAA-HRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRK 442
L+ T+ I+F T+ + +K + + + LH +Q QR +LE+F+K
Sbjct: 455 KLIDDLGDDKTA--IVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKK 512
Query: 443 QQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDND 502
++ + LV TDV RGLDI+ + VIN+ P + Y HR+GRT RAG+ G A TF+T D
Sbjct: 513 KRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLED 572
Query: 503 RSLLKGIAKR 512
+ + G+ ++
Sbjct: 573 KDVFYGLKQK 582
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 168/384 (43%), Gaps = 45/384 (11%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
SF EL L L+RA G KPT IQ + IP L G+D+ A TGSGKT A+ LP L+
Sbjct: 47 SFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106
Query: 210 RLLFR---PKRMHAIRVLILTPTRELAVQVHSMIEKLAQF--TDIKCCLIVGGLSTKVQE 264
+L K+ A IL P+REL QV++ + L + +K + +S
Sbjct: 107 KLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMR 166
Query: 265 VALRSMPDIVVATPGRMIDHLRNSM---XXXXXXXXXXXXXEADRLLELGFNAEIHELVR 321
AL +P+I+V+TP + + EAD LL G+ + +
Sbjct: 167 NALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTS 226
Query: 322 MCPKKRQTMLFSATMTEEINELIKLSLSKP--LRLSADPSTKRPATLTXXXXXXXXXXXX 379
+ P++ Q +L SAT + ++ +L KL L P L L+ D +
Sbjct: 227 IIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQD 286
Query: 380 NLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQ 439
L +L + + K++IF T RLK+ G+K+A L+G L Q RL LEQ
Sbjct: 287 KLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHILEQ 346
Query: 440 FRKQQVDFLVATD-----------------------------------VAARGLDIVGVQ 464
F D+L+ATD RG+D V
Sbjct: 347 FNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVH 406
Query: 465 TVINFACPRDLTSYVHRVGRTARA 488
TVINF P+ +T Y+HR+GRT RA
Sbjct: 407 TVINFDMPQSVTGYIHRIGRTGRA 430
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 185/383 (48%), Gaps = 14/383 (3%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
+F L LL E GY PTPIQ IP AL+G+ + SA TGSGKTA+F +P +
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 210 RLLF------RPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQ 263
R +R + + ++L PTREL VQV + L + K L+VGG Q
Sbjct: 171 RCTTYHSEHPSDQRRNPL-AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQ 229
Query: 264 EVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMC 323
++ ++++ TPGR++D L + E D +L+ GF ++ ++ +
Sbjct: 230 LYRIQQGVELIIGTPGRVVD-LLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL 288
Query: 324 PKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEA 383
+ Q +LFSAT++ E+ E + SL+K + L + + +P +
Sbjct: 289 -SQPQVLLFSATISREV-EKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKL 346
Query: 384 VLLAMCSKTFTSKVIIFSGTKQAAHRL-KIIFGLAGLKAAELHGNLTQAQRLEALEQFRK 442
+ F +++ ++ A L I + G+KA +HG +R + + F
Sbjct: 347 FDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLG 406
Query: 443 QQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDND 502
+V LV+T V RG+D++ V+ VI F P + Y+H +GR +R G +G A+ FV ++D
Sbjct: 407 GEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDD 466
Query: 503 RSLLKGIA---KRAGAKLKSRIV 522
R+L + K +GA + ++
Sbjct: 467 RNLFPDLVAALKSSGAAIPKELI 489
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 185/383 (48%), Gaps = 14/383 (3%)
Query: 150 SFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLE 209
+F L LL E GY PTPIQ IP AL+G+ + SA TGSGKTA+F +P +
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 210 RLLF------RPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQ 263
R +R + + ++L PTREL VQV + L + K L+VGG Q
Sbjct: 171 RCTTYHSEHPSDQRRNPL-AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQ 229
Query: 264 EVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMC 323
++ ++++ TPGR++D L + E D +L+ GF ++ ++ +
Sbjct: 230 LYRIQQGVELIIGTPGRVVD-LLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL 288
Query: 324 PKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEA 383
+ Q +LFSAT++ E+ E + SL+K + L + + +P +
Sbjct: 289 -SQPQVLLFSATISREV-EKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKL 346
Query: 384 VLLAMCSKTFTSKVIIFSGTKQAAHRL-KIIFGLAGLKAAELHGNLTQAQRLEALEQFRK 442
+ F +++ ++ A L I + G+KA +HG +R + + F
Sbjct: 347 FDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLG 406
Query: 443 QQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDND 502
+V LV+T V RG+D++ V+ VI F P + Y+H +GR +R G +G A+ FV ++D
Sbjct: 407 GEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDD 466
Query: 503 RSLLKGIA---KRAGAKLKSRIV 522
R+L + K +GA + ++
Sbjct: 467 RNLFPDLVAALKSSGAAIPKELI 489
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 190/418 (45%), Gaps = 47/418 (11%)
Query: 144 TSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAF 203
H+ F + L LLRA G+ P+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
Query: 204 ALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFT-DIKCCLIVGGLSTKV 262
L TL+++ P ++ A L+L TRELA Q+ + + + + D K + GG++ K+
Sbjct: 101 VLSTLQQIEPSPGQVSA---LVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKI 157
Query: 263 QEVALRS-MPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLE-LGFNAEIHELV 320
+ L++ P IVV TPGR++ R E D++LE L ++ E+
Sbjct: 158 HKDLLKNECPHIVVGTPGRVLALAREK-DLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
Query: 321 RMCPKKRQTMLFSATMTEEINELIKLSLSKPLR-LSAD---------------------- 357
+M P +Q M+FSAT+++EI + K + LR LS D
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRA 276
Query: 358 ------PSTKRP--------ATLTXXXXXXXXXXXXNLEA--VLLAMCSKTFTSKVIIFS 401
PS P A LT +E L + ++V+IF
Sbjct: 277 RMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFV 336
Query: 402 GTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIV 461
+ A L + + +H ++Q +RL + F++ LVATD+ RG+DI
Sbjct: 337 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIE 396
Query: 462 GVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTD-NDRSLLKGIAKRAGAKLK 518
V VIN+ P +Y+HRVGR R G +G A+TFV +D +L + +R +K
Sbjct: 397 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIK 454
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 180/382 (47%), Gaps = 28/382 (7%)
Query: 146 FHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFAL 205
+ A F E +S L+A A G K T +Q A + L G+D A TG+GK+ AF L
Sbjct: 325 YSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLL 384
Query: 206 PTLERLLFRPKRMHA---------IRVLILTPTRELAVQVHSMIEKLAQFTD-IKCCLIV 255
P +E +L K M++ I LIL PTRELA Q+ + + L +F D I ++
Sbjct: 385 PAIETVL---KAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLI 441
Query: 256 GGLSTKVQEVALRSMP-DIVVATPGRMIDHLRN--SMXXXXXXXXXXXXXEADRLLELGF 312
GG K+ + L S P I++ATPGR++DH+ N + EAD LL+LGF
Sbjct: 442 GGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGF 501
Query: 313 NAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSK--------PLRLSADPSTKRPA 364
++ +++ P++RQ++LFSAT+ +E+ + +L L + L R +
Sbjct: 502 RRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQS 561
Query: 365 TLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAEL 424
+ + +L + T K+I+F T + + L E+
Sbjct: 562 CIVAPHESHFHL----VPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREI 617
Query: 425 HGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGR 484
H Q R ++F++ LV +DV+ARG++ V VI P D Y+HR+GR
Sbjct: 618 HARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGR 677
Query: 485 TARAGREGYAVTFVTDNDRSLL 506
T R G+ G + + +R L
Sbjct: 678 TGREGKGGEGLLLIAPWERYFL 699
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 200/427 (46%), Gaps = 72/427 (16%)
Query: 156 LSRPLLRACEALGYSKPTPIQAACI--PLALSG--RDICGSAITGSGKTAAFALPTLERL 211
L+ L +A E +G S P+Q A + G RDIC ++ TGSGKT ++ALP ++ L
Sbjct: 38 LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLL 97
Query: 212 LFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVG--------------- 256
RP R +R L++ PTR+LA+QV + + +A + VG
Sbjct: 98 ASRPVR--CLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTP 155
Query: 257 ----GLSTKVQEVA--LRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLEL 310
G+ +++ L S DI+VATPGR++DH+ N+ E DRLL
Sbjct: 156 KLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLRE 215
Query: 311 GFNAEIHELVRMCPK-----------------------KRQT---------------MLF 332
+ + + ++++ +RQ+ M+
Sbjct: 216 AYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVL 275
Query: 333 SATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAMCSKT 392
SAT+T++ ++LI+L L PL ++ S R L ++ V L K+
Sbjct: 276 SATLTQDPSKLIQLDLHHPLFMTTGGSRYR---LPEKLECLRLICETGMKPVYLVALLKS 332
Query: 393 FTS-KVIIFSGTKQAAHRL-KII--FGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFL 448
+ K IIF+ + + RL K++ FG +KA E G L Q+ R + L+ FRK + L
Sbjct: 333 WEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVL 392
Query: 449 VATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKG 508
VA+D RG+D+ GV VIN+ P +++HR GRTARAG+ G T +++++
Sbjct: 393 VASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSK 452
Query: 509 IAKRAGA 515
+ ++ G+
Sbjct: 453 LLEKVGS 459
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 178/374 (47%), Gaps = 20/374 (5%)
Query: 149 DSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTL 208
++F EL LS ++ A + L PT IQ IP + + + + TGSGKT A+ LP +
Sbjct: 112 ENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIV 171
Query: 209 ERL------LFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKV 262
+ + L + + R ++L PTREL+ QV+ + + ++ + L+ GG +
Sbjct: 172 QLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRP 231
Query: 263 QEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHEL--- 319
QE +L + D+VV TPGR++ H+ EAD + + GF EI +
Sbjct: 232 QEDSLNNAIDMVVGTPGRILQHIEEG-NMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAP 290
Query: 320 -----VRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPATLTXXXXXXX 374
++ + QT+L +ATMT + +L+ L K+ A
Sbjct: 291 LNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIAN-ARHDFIKL 349
Query: 375 XXXXXNLEAVLLAM-CSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQR 433
LEA+L + S SKV++F T ++ + + HG + QR
Sbjct: 350 SGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQR 409
Query: 434 LEALEQFRKQQVD--FLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGRE 491
+E L++F+ ++ D LV TD+AARGLD+ V V+ F P++ Y+HR GRTAR G +
Sbjct: 410 VENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGAK 468
Query: 492 GYAVTFVTDNDRSL 505
G + V+ D+ L
Sbjct: 469 GKVTSLVSRKDQML 482
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 178/375 (47%), Gaps = 14/375 (3%)
Query: 146 FHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFAL 205
+ A F E +S L+A A G K T +Q A + L G+D A TG+GK+ AF L
Sbjct: 372 YSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLL 431
Query: 206 PTLERLL---FRPKRMHA---IRVLILTPTRELAVQVHSMIEKLAQFTD-IKCCLIVGGL 258
P +E +L K +H I VLIL PTRELA Q+ + + L + D I ++GG
Sbjct: 432 PAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGT 491
Query: 259 STKVQEVALRSMP-DIVVATPGRMIDHLRN--SMXXXXXXXXXXXXXEADRLLELGFNAE 315
++ + L S P I++ATPGR++DH+ N + EAD LL+LGF +
Sbjct: 492 RFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRD 551
Query: 316 IHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKP---LRLSADPSTKRPATLTXXXXX 372
+ +++ P++RQ++LFSAT+ +E+ + +L L + + + +
Sbjct: 552 VEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIV 611
Query: 373 XXXXXXXNLEAVLLA-MCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQA 431
+L LL + K+I+F T + + L E+H Q
Sbjct: 612 APHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQL 671
Query: 432 QRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGRE 491
R ++F++ LV +DV+ARG++ V VI P D Y+HR+GRT R G+
Sbjct: 672 HRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKG 731
Query: 492 GYAVTFVTDNDRSLL 506
G + + +R L
Sbjct: 732 GKGLLLIAPWERYFL 746
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 192/422 (45%), Gaps = 54/422 (12%)
Query: 146 FHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFAL 205
F A SF EL L LL + E G+S PT +Q+A +P + G D + TGSGKT A+ L
Sbjct: 107 FSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLL 166
Query: 206 PTLER---LLFRPKRMHA-------IRVLILTPTRELAVQVHSMIEKLAQFTDIKCC-LI 254
P L L + + H+ I+ +I+ P+REL +Q+ +EKL + +
Sbjct: 167 PILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQL 226
Query: 255 VGGLSTKVQEVAL-RSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFN 313
VGG + QE AL ++ P IVV TPGR I + E D LL F
Sbjct: 227 VGGANRMRQEEALKKNKPAIVVGTPGR-IAEISKGGKLHTHGCRFLVLDEVDELLSFNFR 285
Query: 314 AEIHELVRMCPKK--------------RQTMLFSATMTEEINELIKLSLSKPLRLSADP- 358
+IH ++ K+ RQT+L SAT+ + K +P+ + A+
Sbjct: 286 EDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKV 345
Query: 359 ---STKRPA----TLTXXXXXXXXXXXXNLEAVLLAM----CSKTFTSKVIIFSGTKQA- 406
T +P+ +LT ++++ A+ C KV A
Sbjct: 346 TPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHAL 405
Query: 407 -----------AHRLK-IIFGLA--GLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATD 452
+ +LK +++ L G+ +AE+HG+L + R L++F+ ++ LV +
Sbjct: 406 DAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNE 465
Query: 453 VAARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKGIAKR 512
++ARGLD+ V+N P D Y HR GRT R GR+G VT ++ ++K + K+
Sbjct: 466 LSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQ 525
Query: 513 AG 514
G
Sbjct: 526 LG 527
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 10/335 (2%)
Query: 188 DICGSAITGSGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFT 247
D+ A +G GKTA F L TL+++ P ++ A L+L TRELA Q+ + + + +
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSA---LVLCHTRELAYQICNEFVRFSTYL 58
Query: 248 -DIKCCLIVGGLSTKVQEVALRS-MPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEAD 305
D K + GG++ K+ + L++ P IVV TPGR++ R E D
Sbjct: 59 PDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREK-DLSLKNVRHFILDECD 117
Query: 306 RLLE-LGFNAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLSADPSTKRPA 364
++LE L ++ E+ +M P +Q M+FSAT+++EI + K + P+ + D K
Sbjct: 118 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK--L 175
Query: 365 TLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAEL 424
TL L + ++V+IF + A L + + +
Sbjct: 176 TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 235
Query: 425 HGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGR 484
H ++Q +RL + F++ LVATD+ RG+DI V VIN+ P +Y+HRVGR
Sbjct: 236 HSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 295
Query: 485 TARAGREGYAVTFVTD-NDRSLLKGIAKRAGAKLK 518
R G +G A+TFV +D +L + +R +K
Sbjct: 296 AGRFGTKGLAITFVASASDSEVLNQVQERFEVDIK 330
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 172/354 (48%), Gaps = 14/354 (3%)
Query: 179 CIPLALSGRDICGSAITGSGKTAAFALPTLERLLF------RPKRMHAIRVLILTPTREL 232
IP AL+G+ + SA TGSGKTA+F +P + R +R + + ++L PTREL
Sbjct: 3 AIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPL-AMVLAPTREL 61
Query: 233 AVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMXXX 292
VQV + L + K L+VGG Q ++ ++++ TPGR++D L +
Sbjct: 62 CVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVD-LLSKHTIE 120
Query: 293 XXXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPL 352
E D +L+ GF ++ ++ + + Q +LFSAT++ E+ E + SL+K +
Sbjct: 121 LDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP-QVLLFSATISREV-EKVGGSLAKEI 178
Query: 353 RLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRL-K 411
L + + +P + + F +++ ++ A L
Sbjct: 179 ILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLAN 238
Query: 412 IIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFAC 471
I + G+KA +HG +R + + F +V LV+T V RG+D++ V+ VI F
Sbjct: 239 AITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDM 298
Query: 472 PRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKGIA---KRAGAKLKSRIV 522
P + Y+H +GR +R G +G A+ FV ++DR+L + K +GA + ++
Sbjct: 299 PSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELI 352
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 159/330 (48%), Gaps = 38/330 (11%)
Query: 151 FMELN--LSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTL 208
F EL LS ++ A + G+ TP+QA IP S +D+ A TGSGKT AF LP +
Sbjct: 17 FSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFI 76
Query: 209 E---RLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVGGLSTKVQEV 265
E R P + H + +I++PTREL+ Q+H + + + KC + ++T +E
Sbjct: 77 EIIRRSNSYPPKPHQVMGVIISPTRELSAQIHK-VARAVRLDFAKCREVEADMNTLEEEG 135
Query: 266 ALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIHELVRMCPK 325
A ++++ TPGR+ D ++ EADRLL++GF +++ ++ PK
Sbjct: 136 A-----NLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPK 190
Query: 326 KRQTMLFSATMTEEINELIKLSLSKP-LRLSADPSTKRPATLTXXXXXXXXXXXXNLEAV 384
+R+T LFSAT T+ + +L K L P L+ AD + +
Sbjct: 191 QRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQ---------------------- 228
Query: 385 LLAMCSKTFTSKVIIFSGTKQAAHRLKIIFG-LAGLKAAEL---HGNLTQAQRLEALEQF 440
L+ + + K+++F T ++ + LK+ HG + Q R AL F
Sbjct: 229 LVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASF 288
Query: 441 RKQQVDFLVATDVAARGLDIVGVQTVINFA 470
+ L+ TDVAARGLDI G+ + + A
Sbjct: 289 TEASSGVLLCTDVAARGLDIPGIVYIRSLA 318
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 178/405 (43%), Gaps = 50/405 (12%)
Query: 146 FHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFAL 205
F +F E+ S +++A + + +P IQA + G+ + +GSGKT A+ +
Sbjct: 371 FSRKTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLV 430
Query: 206 PTLERLLFRPKRMHAI------RVLILTPTRELAVQVHSMIEKLAQ-FTDIKCCLIVGGL 258
P ++RL + H+ RV++L PT ELA QV + +++ + ++ GG
Sbjct: 431 PVIQRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGF 490
Query: 259 STKVQEVALRSMPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLL-ELGFNAEIH 317
+ Q L D+++ATPGR +L N E D L + F A +
Sbjct: 491 RQRTQLENLEQGVDVLIATPGRFT-YLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQ 549
Query: 318 ELVRMCPKKRQTMLFSATMTEEI-NELIKL-------------SLSKPLR------LSAD 357
L+ P Q + +AT+ EI N+L+++ +S L D
Sbjct: 550 NLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDD 609
Query: 358 PSTKRPATLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLA 417
+ K P T N + LL + + SK IIF + +++ IF
Sbjct: 610 NAEKTPET-----------AFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRV 658
Query: 418 GLKAAELH-----GNLTQAQRLEALEQFRKQQVD----FLVATDVAARGLDIVGVQTVIN 468
K +LH L+Q RL +++F Q + FLV TD A+RG+D GV V+
Sbjct: 659 DRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVL 718
Query: 469 FACPRDLTSYVHRVGRTARAGR-EGYAVTFVTDNDRSLLKGIAKR 512
F PRD + YV RVGRTAR R +G A FV L + I +R
Sbjct: 719 FDFPRDPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRIIER 763
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 186/415 (44%), Gaps = 59/415 (14%)
Query: 140 SSDGTSFHADSFMELNLSRPLLRACEA-LGYSKPTPIQAACIPLALS--GRDICGSAITG 196
S D A F +LNLS L++ + + KP+ IQA +P+ ++ + + A G
Sbjct: 82 SGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNG 141
Query: 197 SGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLIVG 256
SGKT F L L R+ + + L + PTRELA Q +++K+ +FT I L V
Sbjct: 142 SGKTTCFVLGMLSRV---DPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVP 198
Query: 257 GLSTKVQEVALRSMP---DIVVATPGRM----------IDHLRNSMXXXXXXXXXXXXXE 303
ST+ A R P +V+ TPG + ++HL+ E
Sbjct: 199 D-STRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLK-----------ILVFDE 246
Query: 304 ADRLLEL-GFNAE----IHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLRLS--- 355
AD +L GF + + ++ R+ P Q +LFSAT E + + + ++ P +L
Sbjct: 247 ADHMLATDGFRDDSLKIMKDIGRVNPN-FQVLLFSATFNETVKDFVARTVKDPNQLFVKR 305
Query: 356 ---ADPSTKRPATLTXXXXXXXXXXXXNLEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKI 412
A S K+ + +E + + + IIF TK +A ++
Sbjct: 306 EDLALDSVKQYKVVCPKEQN-------KIEVIKDQIMELGDIGQTIIFVKTKASAQKVHK 358
Query: 413 IFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACP 472
G +HGNLT++ R + +++F++ L+ATDV ARG D V V+N+ P
Sbjct: 359 ALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLP 418
Query: 473 R-------DLTSYVHRVGRTARAGREGYAVTFVTDN--DRSLLKGIAKRAGAKLK 518
D Y+HRVGR R GR+G + D+ D+ +++ I K A +K
Sbjct: 419 TKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEANVK 473
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Query: 144 TSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAF 203
H+ F + L LLRA G+ P+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
Query: 204 ALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFT-DIKCCLIVGGLSTKV 262
L TL+++ P ++ A L+L TRELA Q+ + + + + D K + GG++ K+
Sbjct: 101 VLSTLQQIEPSPGQVSA---LVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKI 157
Query: 263 QEVALRS-MPDIVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLE-LGFNAEIHELV 320
+ L++ P IVV TPGR++ R E D++LE L ++ E+
Sbjct: 158 HKDLLKNECPHIVVGTPGRVLALAREK-DLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
Query: 321 RMCPKKRQTMLFSATMTEEINELIK 345
+M P +Q M+FSAT+++EI + K
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCK 241
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 395 SKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVA 454
++V+IF + A L + + +H ++Q +RL + F++ LVATD+
Sbjct: 348 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLV 407
Query: 455 ARGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTD-NDRSLLKGIAKRA 513
RG+DI V VIN+ P +Y+HRVGR R G +G A+TFV +D +L + +R
Sbjct: 408 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERF 467
Query: 514 GAKLK 518
+K
Sbjct: 468 EVDIK 472
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 162/377 (42%), Gaps = 35/377 (9%)
Query: 160 LLRACEALGYSKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLLFRPKRMH 219
+L E +G+ PT IQ +P +GRD A TGSGKT + L L P+R
Sbjct: 87 ILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFS--LINPQR-S 143
Query: 220 AIRVLILTPTRELAVQVHSMIEKLAQFT--DIKCCLIV----GGLSTKVQEVALRSMPDI 273
+++ +I+ PTREL +QV + LA + D+K C ++ GG + + P I
Sbjct: 144 SVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAI 203
Query: 274 VVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLL----ELGFNAEIHELVRMCPKKRQT 329
+VAT + H+ E D L ++G ++ C KRQT
Sbjct: 204 LVATVASLC-HMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSC-DKRQT 261
Query: 330 MLFSATMTEE---INELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLEAVLL 386
+ SA++ + +++ I+ +K + S P L N VLL
Sbjct: 262 VFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKT-NKHQVLL 320
Query: 387 AMCSKTFTSKVIIFSG-----TKQAAHRLKIIFGLAGLKAAE--------LHGNLTQAQR 433
A+ IIF G +K+A + + LK + L G++ R
Sbjct: 321 ALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSR 380
Query: 434 LEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTAR---AGR 490
+L + R+ LV+TD+AARG+D+ + NF P+ +T Y+HR GR R + R
Sbjct: 381 AASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDR 440
Query: 491 EGYAVTFVTDNDRSLLK 507
+ +T +R +L+
Sbjct: 441 KCIVANLITSEERFVLQ 457
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 103/243 (42%), Gaps = 45/243 (18%)
Query: 134 NKPYFASSDGTSFHADSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALSGRDICGSA 193
N +FA H S+ L LS + A G+ +P+ QA CIP LSG+D+ +A
Sbjct: 71 NDTFFAD------HTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAA 124
Query: 194 ITGSGKTAAFALPTLERLLF------------RPKRMHAIRVLILTPTRELAVQVHSMIE 241
TGSGKT + P +++L RP + I LIL P L QV M+
Sbjct: 125 ETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNIS-LILCPNVMLCEQVVRMVN 183
Query: 242 KLAQFTDIKCCLIVGGLSTKVQEVALRS-----MPDIVVATPGRMIDHL---RNSMXXXX 293
L G +V+ V +PDI+V+TP +++++ RN
Sbjct: 184 GLVDED--------GNPLLRVEAVCGSQGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFL 235
Query: 294 XXXXXXXXXEADRLLELGFNAEIHELVRMCPKKRQTMLFSATMTEEINELIKLSLSKPLR 353
EAD LL F +I L+ M + F ++++ L K +L +P+
Sbjct: 236 RCVKYVVFDEADMLLCGSFQNQIIRLINM-------LRFD---EKQVSRLAKSNLGRPME 285
Query: 354 LSA 356
+ A
Sbjct: 286 IDA 288
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 396 KVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAA 455
+ ++F+ T +A + I A ++ H N +R L FR+ F V TD AA
Sbjct: 426 RTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRETGGVF-VCTDAAA 484
Query: 456 RGLDIVGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKGI 509
RG+D+ V VI ++HR+GRTARAG+ G + T+ +R L++ I
Sbjct: 485 RGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTEANRDLVEAI 538
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 326 KRQTMLFSATMTEE---INELIKLSLSKPLRLSADPSTKRPATLTXXXXXXXXXXXXNLE 382
KRQT+ SA++ + +++ I+ +K + S P L N
Sbjct: 101 KRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKT-NKH 159
Query: 383 AVLLAMCSKTFTSKVIIFSG-----TKQAAHRLKIIFGLAGLKAAE--------LHGNLT 429
VLLA+ IIF G +K+A + + LK + L G++
Sbjct: 160 QVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMN 219
Query: 430 QAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTSYVHRVGRTAR-- 487
R +L + R+ LV+TD+AARG+D+ + NF P+ +T Y+HR GR R
Sbjct: 220 FNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKP 279
Query: 488 -AGREGYAVTFVTDNDRSLLK 507
+ R+ +T +R +L+
Sbjct: 280 FSDRKCIVANLITSEERFVLQ 300
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 418 GLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTS 477
+ A H L R+ E F ++ +VAT GLD V VI+F+ P +
Sbjct: 510 NINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAFGMGLDKGDVGAVIHFSVPGSMEE 569
Query: 478 YVHRVGRTARAGREGYAVTFVTDNDRSL-LKGIAKRAG 514
YV +GR R GR Y F DND L L+ +A G
Sbjct: 570 YVQEIGRAGRDGRLSYCHLFY-DNDTYLKLRSLAHSDG 606
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 418 GLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIVGVQTVINFACPRDLTS 477
G+ +AEL+ +L + +R L++F+ + V LV ++ GL+ +++ P D
Sbjct: 649 GMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVH 708
Query: 478 YVHRVGRTARAGREGYAVT 496
Y HR GR R GR+ VT
Sbjct: 709 YAHRAGRMRRPGRKMTVVT 727