Miyakogusa Predicted Gene

Lj6g3v0608270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0608270.1 Non Chatacterized Hit- tr|B9SHY0|B9SHY0_RICCO
Putative uncharacterized protein OS=Ricinus communis G,35.93,5e-18,
,CUFF.58080.1
         (165 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G29620.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    74   5e-14
AT5G58880.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    72   2e-13
AT1G07330.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    66   1e-11
AT5G17910.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    64   4e-11
AT5G17910.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    64   4e-11

>AT2G29620.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G07330.1); Has 887 Blast hits to 750 proteins
           in 151 species: Archae - 2; Bacteria - 63; Metazoa -
           270; Fungi - 51; Plants - 111; Viruses - 6; Other
           Eukaryotes - 384 (source: NCBI BLink). |
           chr2:12663200-12665803 REVERSE LENGTH=747
          Length = 747

 Score = 73.6 bits (179), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 3/67 (4%)

Query: 1   MPGSAPSYMP--RSPYDIPYDPCEERPNLTEDSLLQEYTSNQKDNITFCRHESFSLGPFN 58
           MPGSAPS +   R+P+D+PYDP EE+PNLT DS  QE+      +I FCRHESF    F 
Sbjct: 300 MPGSAPSVLLPRRNPFDLPYDPLEEKPNLTGDSFQQEFAETNPKDIFFCRHESFHHRAF- 358

Query: 59  PSETNQD 65
           PSE+  D
Sbjct: 359 PSESQND 365


>AT5G58880.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT2G29620.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:23775966-23779504
           FORWARD LENGTH=1088
          Length = 1088

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 5/63 (7%)

Query: 1   MPGSAPSYMP--RSPYDIPYDPCEERPNLTEDSLLQEYTS-NQKDNITFCRHESFS-LGP 56
           +PGSAPS M   R+P+DIPYDP EERPNLT DS  QE++  NQKD + FCRHESF     
Sbjct: 284 IPGSAPSVMLQGRNPFDIPYDPQEERPNLTGDSFDQEFSLFNQKD-LFFCRHESFCRFSL 342

Query: 57  FNP 59
           F+P
Sbjct: 343 FSP 345


>AT1G07330.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT2G29620.1); Has 597 Blast hits to 536 proteins
           in 121 species: Archae - 2; Bacteria - 47; Metazoa -
           170; Fungi - 43; Plants - 98; Viruses - 0; Other
           Eukaryotes - 237 (source: NCBI BLink). |
           chr1:2251131-2253585 FORWARD LENGTH=685
          Length = 685

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 3/54 (5%)

Query: 1   MPGSAPSYM--PRSPYDIPYDPCEERPNLTEDSLLQEYTSNQKDNITFCRHESF 52
           MP SAPS +   ++P+DIPYDP EE+PNL+ DS  QE+ +N  D I FCRHESF
Sbjct: 233 MPESAPSVLLPTKNPFDIPYDPQEEKPNLSGDSFQQEFAANPND-IFFCRHESF 285


>AT5G17910.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT2G29620.1). |
           chr5:5927906-5932292 FORWARD LENGTH=1342
          Length = 1342

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 2/58 (3%)

Query: 1   MPGSAPSYM--PRSPYDIPYDPCEERPNLTEDSLLQEYTSNQKDNITFCRHESFSLGP 56
           +PGSAPS M   R+P+D+PY+P EE+P+L  D   +E++S Q  +  F RHESFS+GP
Sbjct: 435 IPGSAPSIMFARRNPFDLPYEPNEEKPDLKGDGFQEEFSSQQPKDPMFRRHESFSVGP 492


>AT5G17910.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT2G29620.1); Has 1807 Blast
           hits to 1807 proteins in 277 species: Archae - 0;
           Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
           Viruses - 0; Other Eukaryotes - 339 (source: NCBI
           BLink). | chr5:5927906-5932292 FORWARD LENGTH=1342
          Length = 1342

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 2/58 (3%)

Query: 1   MPGSAPSYM--PRSPYDIPYDPCEERPNLTEDSLLQEYTSNQKDNITFCRHESFSLGP 56
           +PGSAPS M   R+P+D+PY+P EE+P+L  D   +E++S Q  +  F RHESFS+GP
Sbjct: 435 IPGSAPSIMFARRNPFDLPYEPNEEKPDLKGDGFQEEFSSQQPKDPMFRRHESFSVGP 492