Miyakogusa Predicted Gene
- Lj6g3v0204550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0204550.1 Non Chatacterized Hit- tr|I1K677|I1K677_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27558
PE,64.1,9e-18,ZF_RING_2,Zinc finger, RING-type; zf-RING_2,Zinc finger,
RING-type; RING/U-box,NULL; no description,,CUFF.57582.1
(96 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 63 4e-11
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 2e-09
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 7e-09
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 1e-08
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 3e-08
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 3e-08
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 3e-08
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-08
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 5e-08
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 6e-08
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 1e-07
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-07
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 51 2e-07
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 2e-07
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-07
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 3e-07
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 3e-07
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 3e-07
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 50 4e-07
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 50 4e-07
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 4e-07
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 6e-07
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 6e-07
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 8e-07
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 8e-07
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 8e-07
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 8e-07
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 9e-07
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 49 1e-06
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 49 1e-06
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 1e-06
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 1e-06
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 1e-06
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 48 1e-06
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 48 1e-06
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 2e-06
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 47 2e-06
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 2e-06
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 47 2e-06
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 2e-06
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 2e-06
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 2e-06
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 3e-06
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 47 3e-06
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 3e-06
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 3e-06
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 3e-06
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 4e-06
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 4e-06
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 47 4e-06
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 46 5e-06
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 46 5e-06
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 46 5e-06
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 46 5e-06
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 46 6e-06
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 46 6e-06
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 46 6e-06
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 46 7e-06
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 46 7e-06
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 45 7e-06
AT5G41450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 45 8e-06
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 45 8e-06
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 45 9e-06
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 37/43 (86%)
Query: 1 MKEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTK 43
+KEE++++P CKH+FH+DCIH W+ S++TCPLCR S+ ++TK
Sbjct: 114 LKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVSISSTK 156
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTK 43
+++ QIP CKH FH+DCI W+ S++TCPLCR ++IP+ ++
Sbjct: 110 NDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSR 151
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESD 50
K+++ +P C H FH++CI W+QSNSTCPLCR ++ NP D
Sbjct: 153 KDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFD 201
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHS 61
+++ ++P CKH+FH+DC+ W+ + STCP+CR + P L PE P++G + +
Sbjct: 118 QDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPR--LEPE---PREGPVGTAP 172
Query: 62 PLQVMSLLQPQREDEPSASSNTE 84
L V + L E S+SS+ +
Sbjct: 173 QLLVETRLNLTVEAASSSSSDNK 195
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 13/78 (16%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHS 61
+E++ Q+P C H FH++CI W+ S++TCPLCR S+IP P D +SH
Sbjct: 107 EEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIP------KPSVD-------LSHQ 153
Query: 62 PLQVMSLLQPQREDEPSA 79
++++S ++ E S
Sbjct: 154 SIEIVSSIENTNGGEAST 171
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPE 48
+++ +P C H FHIDCI W+ SNSTCPLCR ++ +F P+
Sbjct: 155 DKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYPD 200
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
+E++ Q+P C H FH++CI W+ S++TCPLCR S+IP
Sbjct: 121 EEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIP 158
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSI 37
E++ IP C HVFHIDCI W+Q N+ CPLCR S+
Sbjct: 145 EKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHS 61
K+ +P CKHVFH+ C+ W+ + STCP+CR P+ + L PE P++G + +
Sbjct: 110 KDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPR-LEPE---PREGPVGDFA 165
Query: 62 P 62
P
Sbjct: 166 P 166
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHS 61
+E++ IP C H+FHIDCI W+Q+N+ CPLCR + T S PP + + S S
Sbjct: 148 EEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT-------SFPPDRVSAPSTS 200
Query: 62 PLQVMSL 68
P ++ L
Sbjct: 201 PENLVML 207
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTK 43
E V +P C H+FHIDCI W+ S++TCP+CR ++ + K
Sbjct: 135 ETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNK 175
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESD 50
+E V IP C H FH DC+ W+++++TCPLCR S P ++ P SD
Sbjct: 104 REPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNS--PAPSRLATPLSD 150
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 4 EVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
EVL++ P CKH FH++C+ W+ ++STCPLCR + P
Sbjct: 103 EVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDP 139
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSII--PTTTKFLNPESD 50
E + +P C HVFH DC+ W+ +STCPLCR + P +LNPE D
Sbjct: 107 ETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDLCLQPGERSYLNPEPD 156
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSI 37
+P C H FH+DCI W QS+STCPLCR ++
Sbjct: 136 LPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
E V IP+C HVFH+DC+ W+ S TCPLCR
Sbjct: 151 ETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCR 182
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT 40
E + IP C HVFH CI W++S++TCPLCR +IP
Sbjct: 155 ETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPV 192
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPE 48
E + IP C HVFH CI W++S +TCPLCR +++P + ++ E
Sbjct: 129 ETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESVSSE 174
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTK 43
E + +P C H FH+ CI W++S+S CPLCR II TT+
Sbjct: 166 ESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQ 206
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT 40
+E +P C HVFH+DCI W +S S+CPLCR + P
Sbjct: 124 DEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPA 161
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 4 EVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHSP 62
E+L++ P C+H FHI CI W++ ++TCPLCR + N E D G S +
Sbjct: 135 EILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRV--------NIEDDLSVLGN--SSTS 184
Query: 63 LQVMSLLQPQRED 75
L++++ + + ED
Sbjct: 185 LRILNQSETREED 197
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT 40
K + Q+P C H+FH+ CI W++ N TCP+CR S +PT
Sbjct: 157 KHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLPT 195
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHS 61
E++ +P C H FH+ CI W+Q + TCP CR ++ T K L S Q A + S
Sbjct: 146 GEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFSQADQVAATPTAS 205
Query: 62 PLQVMSLLQPQ 72
+ ++ L+P+
Sbjct: 206 VIVRIAPLEPE 216
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
++E+ +P C H FH++CI W+ +NSTCPLCR
Sbjct: 132 EDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 7/52 (13%)
Query: 1 MKEEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDP 51
M+EE+L++ P CKH FH+ C+ W++ N +CP+CR S +PT P+S P
Sbjct: 144 MEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPT------PQSTP 189
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
+P CKH FH+DCI W S+S+CPLCR I P
Sbjct: 92 MPNCKHTFHVDCIDMWFHSHSSCPLCRSLIEP 123
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
++E +P C H FH+DCI W +S STCPLCR + P
Sbjct: 118 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQP 155
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLN-------PESDPPQQ 54
+E V +P C H FH+ CI W+ S+S+CP CR +I T K + + PPQ
Sbjct: 141 EERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLNSTQPPQD 200
Query: 55 GAIISHSPLQ 64
I+ +PL+
Sbjct: 201 SIILQIAPLE 210
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCR 34
+P C+H FH+DCI W S+STCPLCR
Sbjct: 135 LPNCQHTFHVDCIDMWFHSHSTCPLCR 161
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHSPLQVMS 67
+P C H FH++CI W+ S+STCPLCR +++ + N +S S L V+
Sbjct: 142 LPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHN-----------LSSSYLLVLE 190
Query: 68 LLQPQREDEPSASSNTE 84
Q R+ P SN++
Sbjct: 191 SEQSSRDMVPVLESNSQ 207
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
E+V ++P C HVFH+DC+ W++ N+TCPLC+
Sbjct: 366 EQVRELP-CSHVFHVDCVDKWLKINATCPLCK 396
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 2 KEEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTT 42
+EE L++ P CKH FH+ CI W++S++ CPLCR I+ T
Sbjct: 226 EEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANT 267
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
KE + IP C+H FH DCI W++ N TCP+CR
Sbjct: 340 KETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSI 37
+P C H FH+ CI W+ SNSTCPLCR S+
Sbjct: 223 LPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCRCSII 38
+P C H FH++CI W QS+STCP+CR +++
Sbjct: 143 LPKCNHSFHVECIDMWFQSHSTCPICRNTVL 173
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 4 EVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCR 34
E+L++ P C+H FHI CI W++ ++TCPLCR
Sbjct: 134 EILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 165
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSI-------------IPTTTKFLNPES 49
+ V +P C H FH++CI W++S+ CPLCR +I +P + P
Sbjct: 167 DYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSL 226
Query: 50 DPPQQGAIISHSPLQVMSLLQPQREDEPSASSNTEN 85
D + AII + + P R + + +++T N
Sbjct: 227 DDEENNAII------IRGEITPSRSNWNTIAADTTN 256
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSI-------------IPTTTKFLNPES 49
+ V +P C H FH++CI W++S+ CPLCR +I +P + P
Sbjct: 167 DYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSL 226
Query: 50 DPPQQGAIISHSPLQVMSLLQPQREDEPSASSNTEN 85
D + AII + + P R + + +++T N
Sbjct: 227 DDEENNAII------IRGEITPSRSNWNTIAADTTN 256
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCR 34
+P C H FH++CI W+QSNSTCP+CR
Sbjct: 104 LPSCDHWFHVECIDSWLQSNSTCPICR 130
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 8 IPYCKHVFHIDCIHHWMQSNSTCPLCR 34
+P C H FH+DCI W+ S+STCPLCR
Sbjct: 150 LPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
E + +P C HVFH DC+ W+ +STCP+CR ++P
Sbjct: 96 ETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAKVVP 132
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSII---PTTTKFLNP-ESDPPQQGA 56
E + +P C H FHI CI W+ S++ CPLCR I TT ++ P E P G+
Sbjct: 188 ESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGS 245
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTT 42
E + +P C H FH+ CI W++S+S CPLCR I+ ++
Sbjct: 169 NESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSA 209
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFL 45
++++ +P C H FH DCI W+ SN TCPLCR + + + +
Sbjct: 127 EDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLM 170
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 11 CKHVFHIDCIHHWMQSNSTCPLCRCSIIP------TTTKFLNPESDPPQQGAIISHSPLQ 64
C H+FH+ C+ W++ +TCP CR ++P T + P + QQG S S Q
Sbjct: 128 CGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGTSSSDGQ 187
Query: 65 VMSLLQPQREDEPSASSNTENFSR 88
S+ +++ +EN SR
Sbjct: 188 GSSV----------SAAASENMSR 201
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT 40
E++ +I C H FH+DCI W+ STCPLCR I P
Sbjct: 81 EKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPPV 118
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAII 58
E + +P C H FH+ CI W++S+S CPLCR + T NP + Q +++
Sbjct: 153 ESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV----TGVNNPTASVGQNVSVV 204
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 3 EEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
EE L++ P C H FH CI W+ S STCP+CR S+ P
Sbjct: 138 EETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPP 175
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 3 EEVLQI-PYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHS 61
+E L++ P C HVFH DC+ W+ +STCPLCR ++ LN + D S +
Sbjct: 145 DETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLV------LNQQGDDDDSTESYSGT 198
Query: 62 -PLQVMSLLQPQR 73
P + S P+R
Sbjct: 199 DPGTISSSTDPER 211
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIISHSP 62
E + +P C H FH++CI W+ S+ CPLCR ++ T +PP Q +H P
Sbjct: 146 ESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLIT--------EPPHQETETNHQP 197
Query: 63 LQVMSLLQPQREDEPSASSNTENF 86
S R+D + N F
Sbjct: 198 DSESSNDLRGRQDSSRSRRNHNIF 221
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT 40
EE+ +P C H FH+ CI W+ S S+CP CR ++P
Sbjct: 124 EEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPV 161
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 11 CKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTT 42
C H FH++CI W+ S+STCPLCR ++ +
Sbjct: 157 CGHGFHVECIDMWLSSHSTCPLCRSPVLAAVS 188
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 1 MKEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIP 39
+ EV +P C H FH++CI W++ N CP CRCS+ P
Sbjct: 244 IGHEVRGLP-CAHNFHVECIDQWLRLNVKCPRCRCSVFP 281
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 11 CKHVFHIDCIHHWMQSNSTCPLCRCSIIP------TTTKFLNPESDPPQQGAIISHSPLQ 64
C H+FH+ C+ W++ +TCP CR ++P T + P + QQG S S Q
Sbjct: 236 CGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGTSSSDGQ 295
Query: 65 VMSLLQPQREDEPSASSNTENFSR 88
S+ +++ +EN SR
Sbjct: 296 GSSV----------SAAASENMSR 309
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIIS 59
KE V+ P CKH+FH +CI W+++ CP+CR I+ T + +S PP G+ ++
Sbjct: 182 KETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQ----DSSPPANGSNLT 234
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCR 34
EE+ +P C H FH++CI W+ S S+CP CR
Sbjct: 113 EEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDP------PQQGA 56
E++ +P C H FH+ CI W+Q + TCP CR ++ T K L S P +
Sbjct: 146 EQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILGDFSQADSMASTPTESV 205
Query: 57 IISHSPLQ 64
I+ PL+
Sbjct: 206 IVRIDPLE 213
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPT 40
E++ +I C H FH+DCI W++ S CPLCR I P
Sbjct: 81 EKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPPV 118
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 2 KEEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDPPQQGAIIS 59
KE V+ P CKH+FH +CI W+++ CP+CR I+ T + +S PP G+ ++
Sbjct: 154 KETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQ----DSSPPANGSNLT 206
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 11 CKHVFHIDCIHHWMQSNSTCPLCRCSIIP------TTTKFLNPESDPPQQGAIISHSPLQ 64
C H+FH+ C+ W++ +TCP CR ++P T + P + QQG S S Q
Sbjct: 307 CGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGTSSSDGQ 366
Query: 65 VMSLLQPQREDEPSASSNTENFSR 88
S+ +++ +EN SR
Sbjct: 367 GSSV----------SAAASENMSR 380
>AT5G41450.1 | Symbols: | RING/U-box superfamily protein |
chr5:16588600-16589094 REVERSE LENGTH=164
Length = 164
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 4 EVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTK 43
E+++I C+HVFH CI W+ N TCP CRCS+ K
Sbjct: 122 EIIRINMCRHVFHRFCIDPWLNQNLTCPNCRCSLTARKRK 161
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 3 EEVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRCSIIPTTTKFLNPESDP------PQQGA 56
E++ +P C H FH+ CI W+Q + TCP CR ++ T K L S P +
Sbjct: 146 EQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILGDFSQADSVTAEPTEIV 205
Query: 57 IISHSPLQ 64
I++ PL+
Sbjct: 206 IVTIVPLE 213
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 4 EVLQIPYCKHVFHIDCIHHWMQSNSTCPLCRC 35
E+++I C+HVFH CI W++ N +CP CRC
Sbjct: 129 EIIRIKKCRHVFHRSCIDSWLKQNRSCPNCRC 160