Miyakogusa Predicted Gene

Lj5g3v2258600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2258600.1 tr|J3SCX5|J3SCX5_CROAD Prefoldin subunit 5-like
OS=Crotalus adamanteus PE=2 SV=1,34.75,2e-19,SUBFAMILY NOT NAMED,NULL;
PREFOLDIN SUBUNIT 5,NULL; coiled-coil,NULL; seg,NULL;
Prefoldin,Prefoldin ,CUFF.57102.1
         (156 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23290.1 | Symbols: PFD5 | prefoldin 5 | chr5:7846144-7847428...   225   9e-60

>AT5G23290.1 | Symbols: PFD5 | prefoldin 5 | chr5:7846144-7847428
           FORWARD LENGTH=151
          Length = 151

 Score =  225 bits (574), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 106/140 (75%), Positives = 130/140 (92%)

Query: 17  LERMSVEQLKAVKEQADLEVNLLQDSLSNIRTATTRLEIASSALNDLALRPRASKMLVPL 76
           +E+M ++QLKA+KEQADLEVNLLQDSL+NIRTAT RL+ A++ALNDL+LRP+  KMLVPL
Sbjct: 10  MEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVPL 69

Query: 77  TASLYVPGTLDDSQHLLVDVGTGYFIEKTMDEGKDYCERKINLLKSNFDQLVEVASKKKN 136
           TASLYVPGTLD++  +LVD+GTGYFIEKTMD+GKDYC+RKINLLKSNFDQL EVA+KKK+
Sbjct: 70  TASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEVAAKKKS 129

Query: 137 VADEVGMLLQAKLKQLASSS 156
           VADE GM+LQAK+KQL +++
Sbjct: 130 VADEAGMVLQAKVKQLTAAT 149