Miyakogusa Predicted Gene

Lj5g3v1811610.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1811610.1 tr|G7I521|G7I521_MEDTR Root phototropism protein
OS=Medicago truncatula GN=MTR_1g094850 PE=4 SV=1,81.69,0,POZ
domain,BTB/POZ fold; coiled-coil,NULL; seg,NULL; Broad-Complex,
Tramtrack and Bric a brac,BTB/PO,gene.g62392.t1.1
         (614 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G03250.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   635   0.0  
AT1G30440.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   576   e-164
AT5G13600.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   574   e-164
AT5G66560.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   404   e-112
AT3G44820.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   387   e-107
AT3G50840.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   372   e-103
AT5G48800.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   341   8e-94
AT3G08660.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   309   4e-84
AT5G67385.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   308   1e-83
AT1G67900.3 | Symbols:  | Phototropic-responsive NPH3 family pro...   303   3e-82
AT1G67900.2 | Symbols:  | Phototropic-responsive NPH3 family pro...   303   3e-82
AT1G67900.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   303   3e-82
AT3G08570.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   301   8e-82
AT2G47860.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   301   1e-81
AT4G37590.1 | Symbols: NPY5 | Phototropic-responsive NPH3 family...   297   2e-80
AT1G03010.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   296   4e-80
AT5G67440.1 | Symbols: NPY3 | Phototropic-responsive NPH3 family...   293   3e-79
AT2G47860.3 | Symbols:  | Phototropic-responsive NPH3 family pro...   288   1e-77
AT2G30520.1 | Symbols: RPT2 | Phototropic-responsive NPH3 family...   285   8e-77
AT4G31820.1 | Symbols: ENP, NPY1, MAB4 | Phototropic-responsive ...   284   1e-76
AT2G14820.1 | Symbols: NPY2 | Phototropic-responsive NPH3 family...   281   9e-76
AT5G10250.1 | Symbols: DOT3 | Phototropic-responsive NPH3 family...   275   6e-74
AT3G26490.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   269   4e-72
AT5G67440.2 | Symbols: NPY3 | Phototropic-responsive NPH3 family...   267   2e-71
AT5G47800.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   265   8e-71
AT2G23050.1 | Symbols: NPY4 | Phototropic-responsive NPH3 family...   263   2e-70
AT2G30520.3 | Symbols: RPT2 | Phototropic-responsive NPH3 family...   253   2e-67
AT2G30520.2 | Symbols: RPT2 | Phototropic-responsive NPH3 family...   253   2e-67
AT3G49970.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   235   7e-62
AT2G47860.2 | Symbols:  | Phototropic-responsive NPH3 family pro...   219   5e-57
AT5G64330.1 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsiv...   201   2e-51
AT3G19850.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   193   3e-49
AT1G52770.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   189   5e-48
AT3G15570.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   188   1e-47
AT1G50280.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   182   8e-46
AT5G17580.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   180   2e-45
AT5G48130.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   177   3e-44
AT5G64330.2 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsiv...   176   6e-44
AT3G22104.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   170   2e-42
AT3G03510.1 | Symbols:  | Phototropic-responsive NPH3 family pro...   162   7e-40
AT3G49900.2 | Symbols:  | Phototropic-responsive NPH3 family pro...    70   3e-12
AT3G49900.1 | Symbols:  | Phototropic-responsive NPH3 family pro...    70   3e-12

>AT5G03250.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:774591-776855 FORWARD LENGTH=592
          Length = 592

 Score =  635 bits (1639), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/609 (54%), Positives = 427/609 (70%), Gaps = 29/609 (4%)

Query: 1   MKLGSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSE 60
           M+LGSKSE F+  G++WLC +GL SDV IE+GD  FHLHKFPL+SRS +LE  +++ S++
Sbjct: 4   MRLGSKSEAFHREGQTWLCTTGLVSDVTIEVGDMKFHLHKFPLLSRSGLLERLIEESSTD 63

Query: 61  NEKS-VLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLI 119
           +    VL L ++PGG K F LV KFCYGVK+ELT  NVV LRCA++YL+M+++YGEGNL+
Sbjct: 64  DGSGCVLSLDEIPGGGKTFELVTKFCYGVKIELTAFNVVSLRCAAEYLEMTDNYGEGNLV 123

Query: 120 IQTENFLNHIYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKA-ADPSLVILPIS 178
             TE FLN ++G WTD++KAL+TCEEV+ +AE+LHI SR + SL +KA ADPSL   P+ 
Sbjct: 124 GMTETFLNEVFGNWTDSIKALQTCEEVIDYAEDLHIISRCVDSLAVKACADPSLFNWPVG 183

Query: 179 SGPTSIV-QSPEDHGDLWNGISLTSK--ETTGEDWWFEDVCSLSLPLYKRFMLGAIARHM 235
            G  +   Q+ ED   LWNGIS + K  + TGEDWWF+D   LSLPL+KR +    AR M
Sbjct: 184 GGKNATSGQNTEDESHLWNGISASGKMLQHTGEDWWFDDASFLSLPLFKRLITAIEARGM 243

Query: 236 KPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTP 295
           K   IA +++YY +KH+P                   E DQ+  +EE+V LLP++KG+ P
Sbjct: 244 KLENIAMAVMYYTRKHVPLMNRQVNMDEQVIETPNPSEEDQKTCLEEIVGLLPSKKGVNP 303

Query: 296 TKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQR 355
           TKFLLR L+TAM L+        LE+RIG+QLD+A L DLLIPN+GYS ETL+D++CV R
Sbjct: 304 TKFLLRLLQTAMVLHASQSSRENLERRIGNQLDQAALVDLLIPNMGYS-ETLYDVECVLR 362

Query: 356 MLDHFMIVDHDDVDSTSNDIEEERRLVA-GPQRLSPMAKVAELMDGYLAEVAPDVNLKLP 414
           M++ F+          S  I EE  LV  G   L+P   VA L+DGYLAEVAPDVNLKL 
Sbjct: 363 MIEQFVSSTEQAGIVPSPCIIEEGHLVKDGADLLTPTTLVATLVDGYLAEVAPDVNLKLA 422

Query: 415 KFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAA 474
           KF+++AA +PDYAR LDDG+Y AID+YLK HPW+TDSE+E ICRLMNCQKLSLEASTHAA
Sbjct: 423 KFEAIAAAIPDYARPLDDGVYHAIDVYLKAHPWITDSEREHICRLMNCQKLSLEASTHAA 482

Query: 475 QNERLPLRVVVQVLFFEQLKLRTSVAGWFFTSENLENTQNLSG-NLALLRNIDGNTPPNP 533
           QNERLPLRV+VQVLFFEQL+LRTSV+GWFF SENL+N  N  G N  LL+      P   
Sbjct: 483 QNERLPLRVIVQVLFFEQLRLRTSVSGWFFVSENLDNPDNQHGANGGLLK------PRG- 535

Query: 534 VLAFDNMKDRVSELEKECLTMKHELEKMMKSNKGSWNMILRKLSCRLIPKPSNGKVSKPC 593
               +N+++RVSELEKEC+ MK EL K++++ K SW    RKL+ +        K S+ C
Sbjct: 536 ----ENVRERVSELEKECMNMKQELHKLVRT-KRSWKNFTRKLNFK--------KKSECC 582

Query: 594 R-KSKISPA 601
           + K + +PA
Sbjct: 583 KPKDQATPA 591


>AT1G30440.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:10759475-10762199 FORWARD LENGTH=665
          Length = 665

 Score =  576 bits (1485), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 305/596 (51%), Positives = 405/596 (67%), Gaps = 33/596 (5%)

Query: 1   MKLGSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSE 60
           MKLGSKS+ F   G++W C +GLPSD+++E+G+ SFHLHKFPL+SRS V+E  + + S E
Sbjct: 4   MKLGSKSDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVMERRIAEASKE 63

Query: 61  -NEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLI 119
            ++K ++E+ DLPGG K F LVAKFCYGVK+ELT SNVV LRCA+++L+M+E++GEGNLI
Sbjct: 64  GDDKCLIEISDLPGGDKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEHGEGNLI 123

Query: 120 IQTENFLNHIY-GYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAA-DPSLVILPI 177
            QTE F N +    W D++KAL +C+EVL +A+EL+IT + I SL ++A+ DP+L   P+
Sbjct: 124 SQTETFFNQVVLKSWKDSIKALHSCDEVLEYADELNITKKCIESLAMRASTDPNLFGWPV 183

Query: 178 --SSGPTSIVQSPEDHGDLWNGISLTSK-ETTGEDWWFEDVCSLSLPLYKRFMLGAIARH 234
               GP   +QSP     LWNGIS  ++ + T  DWW+ED   LS PL+KR +    +R 
Sbjct: 184 VEHGGP---MQSP-GGSVLWNGISTGARPKHTSSDWWYEDASMLSFPLFKRLITVMESRG 239

Query: 235 MKPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXX-------XXEADQRNLIEEMVELL 287
           ++   IAGSL YY +KH+P                          E +Q+NL+EE+ ELL
Sbjct: 240 IREDIIAGSLTYYTRKHLPGLKRRRGGPESSGRFSTPLGSGNVLSEEEQKNLLEEIQELL 299

Query: 288 PNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETL 347
             +KGL PTKF +  LR A  L         LEKRIG QLD+A LEDL++P+  ++METL
Sbjct: 300 RMQKGLVPTKFFVDMLRIAKILKASPDCIANLEKRIGMQLDQAALEDLVMPSFSHTMETL 359

Query: 348 HDIDCVQRMLDHFMIVDH---DDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAE 404
           +D+D VQR+LDHF+  D      V S  + +++   L+  PQ ++PM  VA+L+DGYLAE
Sbjct: 360 YDVDSVQRILDHFLGTDQIMPGGVGSPCSSVDDGN-LIGSPQSITPMTAVAKLIDGYLAE 418

Query: 405 VAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQK 464
           VAPDVNLKLPKFQ+LAA +P+YAR LDDG+YRAIDIYLK HPW+ ++E+E +CRL++CQK
Sbjct: 419 VAPDVNLKLPKFQALAASIPEYARLLDDGLYRAIDIYLKHHPWLAETERENLCRLLDCQK 478

Query: 465 LSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFTSENLE--NTQNLSGNLALL 522
           LSLEA THAAQNERLPLR++VQVLFFEQL+LRTSVAG F  S+NL+  + Q  SG     
Sbjct: 479 LSLEACTHAAQNERLPLRIIVQVLFFEQLQLRTSVAGCFLVSDNLDGGSRQLRSGGYVGG 538

Query: 523 RNIDGN--------TPPNPVL--AFDNMKDRVSELEKECLTMKHELEKMMKSNKGS 568
            N  G            N VL    D+M+ RV ELEKEC  M+ E+EK+ K+ KG 
Sbjct: 539 PNEGGGGGGGWATAVRENQVLKVGMDSMRMRVCELEKECSNMRQEIEKLGKTTKGG 594


>AT5G13600.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:4380432-4382497 FORWARD LENGTH=591
          Length = 591

 Score =  574 bits (1479), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 316/612 (51%), Positives = 410/612 (66%), Gaps = 54/612 (8%)

Query: 1   MKLGSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSE 60
           +KLGSKSE+F+L G +WLC++GL  DV+I++ D SFHLHKFPL+SRS    GY++ L S+
Sbjct: 4   LKLGSKSEVFHLSGHTWLCKTGLKPDVMIQVVDESFHLHKFPLLSRS----GYLETLFSK 59

Query: 61  NEKS--VLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNL 118
             ++  V +LHD+PGG + FLLVAKFCYGV++E+TP N V LRCA++YLQMSE+YG+ NL
Sbjct: 60  ASETTCVAQLHDIPGGPETFLLVAKFCYGVRIEVTPENAVSLRCAAEYLQMSENYGDANL 119

Query: 119 IIQTENFLN-HIYGYWTDTLKAL-KTCE-EVLPFAEELHITSRSIHSLVLKAA---DPSL 172
           I  TE+FLN H++  W D++KAL K+CE +VLP AEELHI SR I SL +KA    + S 
Sbjct: 120 IYLTESFLNDHVFVNWEDSIKALEKSCEPKVLPLAEELHIVSRCIGSLAMKACAEDNTSF 179

Query: 173 VILPIS--SGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCS-LSLPLYKRFMLG 229
              PIS   G T+           WNGI     + T E+WWF DV S L LP+YKRF+  
Sbjct: 180 FNWPISLPEGTTTTTI-------YWNGIQ---TKATSENWWFNDVSSFLDLPMYKRFIKT 229

Query: 230 AIARHMKPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXE------ADQRNLIEEM 283
             +R +    IA S+ +YAK+++P                   +       +QR+L+EE+
Sbjct: 230 VESRGVNAGIIAASVTHYAKRNLPLLGCSRKSGSPSEEGTNYGDDMYYSHEEQRSLLEEI 289

Query: 284 VELLPNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYS 343
           VELLP +K +T TKFLLR LRT+M L+        LEKRIG QLDEA LEDLLIPN+ YS
Sbjct: 290 VELLPGKKCVTSTKFLLRLLRTSMVLHASQVTQETLEKRIGMQLDEAALEDLLIPNMKYS 349

Query: 344 METLHDIDCVQRMLDHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLA 403
            ETL+D D VQR+LDHFM+      DS+   I EE++++     L  + KVA L+DGYLA
Sbjct: 350 GETLYDTDSVQRILDHFMLT----FDSS---IVEEKQMMGDSHPLKSITKVASLIDGYLA 402

Query: 404 EVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQ 463
           EVA D NLKL KFQ+L AL+P+  R +DDGIYRAIDIY+K HPW+T+SE+EQ+C LMNCQ
Sbjct: 403 EVASDENLKLSKFQALGALIPEDVRPMDDGIYRAIDIYIKAHPWLTESEREQLCLLMNCQ 462

Query: 464 KLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFTSENLENTQNLSGNLALLR 523
           KLSLEA THAAQNERLPLRV+VQVLFFEQ++LRTS+AGW F SE   +T   SG L    
Sbjct: 463 KLSLEACTHAAQNERLPLRVIVQVLFFEQMRLRTSIAGWLFGSEENNDT---SGAL---- 515

Query: 524 NIDGNTPPNPVLAFDNMKDRVSELEKECLTMKHELEKMMKSNKGSWNMILRKLSCRLIPK 583
             +GN   N  +    M++RV ELEKEC++MK +L+K++K+ +G      R    ++   
Sbjct: 516 --EGNKNTNANMVMHGMRERVFELEKECMSMKQDLDKLVKTKEG------RNFFSKIFGS 567

Query: 584 PSNGKVSKPCRK 595
            S  K S PC K
Sbjct: 568 RSKTKTS-PCGK 578


>AT5G66560.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:26564368-26566662 FORWARD LENGTH=668
          Length = 668

 Score =  404 bits (1037), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 249/659 (37%), Positives = 360/659 (54%), Gaps = 98/659 (14%)

Query: 7   SEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKSV- 65
           SE     G++W C +GLPSD+ IE+ D +FHLHKFPL+S+S+ L   + +  + +  S+ 
Sbjct: 3   SEKSTSKGQAWFCTTGLPSDIEIEVDDMTFHLHKFPLMSKSRKLHRLITEQETRSSSSMA 62

Query: 66  ------------------------------------------LELHDLPGGAKAFLLVAK 83
                                                     ++L D PG +++F +VAK
Sbjct: 63  LITVIDPKVEETDKKGKGHEIEDDKEEEEVEEQEIEENGYPHIKLEDFPGSSESFEMVAK 122

Query: 84  FCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNH-IYGYWTDTLKALKT 142
           FCYGVKM+L+ S VV LRCA+++L+M+E+Y   NLI +TE FL+H +Y    +++KALK 
Sbjct: 123 FCYGVKMDLSASTVVPLRCAAEHLEMTEEYSPDNLISKTERFLSHSVYKSLRESIKALKA 182

Query: 143 CEEVLPFAEELHITSRSIHSLVLKA--ADPSLVILPISSGPTSIVQSPEDHGDLWNGISL 200
           CE V P A  L IT + I S+V +A  ADPSL   P++ G      S  D   +  G + 
Sbjct: 183 CESVSPLAGSLGITEQCIDSIVSRASSADPSLFGWPVNDGGGRGNISATDLQLIPGGAAK 242

Query: 201 TSKETTGE---DWWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIPXXXX 257
           + K+ + +   + WFED+  LSLP++K  +L   +  +    I   L+ YAKKHIP    
Sbjct: 243 SRKKPSRDSNMELWFEDLTQLSLPIFKTVILSMRSGDLSSDIIESCLICYAKKHIPGILR 302

Query: 258 XXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKGL--TPTKFLLRSLRTAMALYXXXXX 315
                          E +QR L+E +   LP +K    + T+FL   LRTA+ L      
Sbjct: 303 SNRKPPSSSSTAVS-ENEQRELLETITSNLPLDKSSISSTTRFLFGLLRTAIILNAAEIC 361

Query: 316 XXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHFMIVDHDDVDSTSNDI 375
              LE++IGSQL+ A L+DLL+P+  Y  ETL+D+D V+R+L HF+    D ++ ++  I
Sbjct: 362 RDLLERKIGSQLERATLDDLLVPSYSYLNETLYDVDLVERILGHFL----DTLEQSNTAI 417

Query: 376 EEERRLVAGPQRLSP-MAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGI 434
            E    V G    SP +  V +L+DG+LAE+A D NLK  KF +LA  +PD AR  DDG+
Sbjct: 418 VE----VDGK---SPSLMLVGKLIDGFLAEIASDANLKSDKFYNLAISLPDQARLYDDGL 470

Query: 435 YRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLK 494
           YRA+D+YLK HPW++++E+E+IC +M+CQKL+LEA THAAQNERLPLR VVQVLFFEQL+
Sbjct: 471 YRAVDVYLKAHPWVSEAEREKICGVMDCQKLTLEACTHAAQNERLPLRAVVQVLFFEQLQ 530

Query: 495 LRTSVAGWFFTSENLENTQNLS-------GNLALL----------RNIDGNTPPNPV--- 534
           LR ++AG    +++   +Q+          NL +           R +D       V   
Sbjct: 531 LRHAIAGTLLAAQSPSTSQSTEPRPSAAIRNLTITEEDGDEAEGERQVDAGKWKKTVREN 590

Query: 535 ----LAFDNMKDRVSELEKECLTMKHELEKMMKSNKG---------SWNMILRKLSCRL 580
               L  D M+ RV  LE+EC  MK  + K+ K             SW+ I +K  C+ 
Sbjct: 591 QVLRLDMDTMRTRVHRLERECSNMKKVIAKIDKEGSSPATTTDRPRSWS-ITKKFGCKF 648


>AT3G44820.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:16361864-16364411 REVERSE LENGTH=651
          Length = 651

 Score =  387 bits (994), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 236/620 (38%), Positives = 357/620 (57%), Gaps = 47/620 (7%)

Query: 5   SKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKS 64
           +K   F+  G  W C++GL SD+ + + D  FHLHKFPL+S+   L    +D  S +++S
Sbjct: 5   AKVSEFHREGNDWFCKTGLSSDITVVVDDVKFHLHKFPLVSKCGKLARMYEDSKSTDKQS 64

Query: 65  VLE--LHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQT 122
           +    L + PGGA  FL+VA+FCYG ++++T  N+V + CA++YL+M+ +YGE NLI Q 
Sbjct: 65  LWTTVLEEFPGGADNFLIVARFCYGARVDITSKNLVSIHCAAEYLEMTNEYGEDNLISQV 124

Query: 123 ENFLN-HIYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSL-VLKAADPSLVILPISSG 180
           E FL+ H+   W D + AL++   VL  AE+L +  + ++++  +   DPSL   P+   
Sbjct: 125 ETFLHKHVLRNWKDCILALQSSSPVLKSAEKLQMIPKLMNAVSTMVCTDPSLFGWPMMMY 184

Query: 181 PTSIVQSPEDHGDLWNGISLTSK-ETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRR 239
            T  +QSP     LWNGI+  ++  ++G DWW+ED+  LS+ L+KR +     + ++   
Sbjct: 185 GT--LQSP-GGSILWNGINTGARMRSSGSDWWYEDISYLSVDLFKRLIKTMETKGIRAES 241

Query: 240 IAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEA---------------DQRNLIEEMV 284
           +AG+++YYA+K++P                    +               DQ  L+E ++
Sbjct: 242 LAGAMMYYARKYLPGLGRWQSGTSDSSKSRRRVVSFNLAKASSPSSMPPLDQIALLETIL 301

Query: 285 ELLPNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSM 344
            LLP ++G +  KFLL  LR A  L         LEKRIG QL+ A L++LLI N   S 
Sbjct: 302 SLLPEKRGRSFCKFLLGLLRVAFILGVDGNCVKKLEKRIGMQLELATLDNLLILNYSDS- 360

Query: 345 ETLHDIDCVQRMLDHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAE 404
           ETL+++DCV+R++ HF+                    V  P   +P+ KVA L+D Y+AE
Sbjct: 361 ETLYNVDCVERIVRHFVSSLSSSSSQLPEFSPPSLDPVTSPSP-APLKKVANLVDSYMAE 419

Query: 405 VAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQK 464
           VA DVNLK  K +SLAA +P+ +R L DG+YRA DIY K HPW++D +KEQ+C +M+ Q+
Sbjct: 420 VASDVNLKPDKMRSLAAALPESSRPLYDGLYRAFDIYFKEHPWLSDRDKEQLCNIMDYQR 479

Query: 465 LSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFTSENLENTQNL--------- 515
           LS++A  HA+ N+RLPLRVV+QVLFFEQ+ LRT++AG      N+ NT+           
Sbjct: 480 LSIDACAHASHNDRLPLRVVLQVLFFEQMHLRTALAGGL----NVANTETAHAVTIPGGR 535

Query: 516 SGNLALLRNIDGNTP---PNPVLAFD--NMKDRVSELEKECLTMKHELEKMMKSNKGSWN 570
           +G   + R  DG       N VL  D   M+ RV ELE+E  ++K E++K +  +  S +
Sbjct: 536 TGQEIVQR--DGWVTVVRQNQVLKVDMQKMRSRVGELEEEFQSIKQEMKKRVSKSSSSMS 593

Query: 571 M-ILRKLSCR-LIPKPSNGK 588
              L KL C+ L+P+ S+ K
Sbjct: 594 SPRLVKLGCKFLLPRASDAK 613


>AT3G50840.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18896353-18898374 REVERSE LENGTH=569
          Length = 569

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 224/589 (38%), Positives = 325/589 (55%), Gaps = 56/589 (9%)

Query: 4   GSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEK 63
            SK + ++ Y       +GLPSD+ IE+ D +FHLHKFPL+S+SK L   + +       
Sbjct: 3   NSKKQAWFFY------TTGLPSDIEIEVDDITFHLHKFPLMSKSKKLHQLITEQEQSKVY 56

Query: 64  SVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTE 123
           S ++L + PGG++ F +V K  YG K++++ S  V LRCA++YL+M+E+Y   NLI +TE
Sbjct: 57  SHIKLENFPGGSEIFEMVIKISYGFKVDISVSTAVPLRCAAEYLEMTEEYSPENLISKTE 116

Query: 124 NFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPT 182
            FL+  ++    +++KALK CE V   AE L IT + I S+V +A+         S+ P+
Sbjct: 117 KFLSEFVFTNVQESIKALKACESVSSLAESLCITEQCIDSIVFQAS---------STDPS 167

Query: 183 SIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAG 242
           S    P ++G ++        + +  + WFED+  LS P+++R +L   +  + P  +  
Sbjct: 168 SFYGWPINNGGIFTVDRKKQSKDSKTELWFEDLTELSFPIFRRVILSMKSSVLSPEIVER 227

Query: 243 SLVYYAKKHIP--XXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTPTKFLL 300
           SL+ YAKKHIP                     E  QR L+E +   LP     T T+ L 
Sbjct: 228 SLLTYAKKHIPGISRSSSASSSSSSSSTTIASENQQRELLETITSDLP--LTATTTRSLF 285

Query: 301 RSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHF 360
             LR A+ L         LEK+IGS L++A L+DLLIP+  Y  ETL+DID V+R+L  F
Sbjct: 286 GLLRAAIILNASENCRKFLEKKIGSNLEKATLDDLLIPSYSYLNETLYDIDLVERLLRRF 345

Query: 361 MIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLA 420
           +    ++V  +S                S +  V  L+DG L E+A D NLK  +F +LA
Sbjct: 346 L----ENVAVSS----------------SSLTVVGRLIDGVLGEIASDANLKPEQFYNLA 385

Query: 421 ALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLP 480
            L+P  AR  DDG+YRA+DIY KTH W+ + EKE+IC +M+C+KL++E  THAAQNERLP
Sbjct: 386 VLLPVQARVYDDGLYRAVDIYFKTHSWILEEEKEKICSVMDCRKLTVEGCTHAAQNERLP 445

Query: 481 LRVVVQVLFFEQLKLRTSVAGWFFTSENLENTQNLSGNLALLRNIDGNTPPNPVLAF--D 538
           LR VVQVLF EQL+LR  + G   T E+ + T      +  L         N VL    D
Sbjct: 446 LRAVVQVLFLEQLQLRQVITGTLLTEEDGDKT------VVDLGRWKEAVKENQVLRLDMD 499

Query: 539 NMKDRVSELEKECLTMKHELEKM-------MKSNKGSWNMILRKLSCRL 580
            M+ RV++LEKECL +K  + K+        K   G W+ I +K  C+ 
Sbjct: 500 TMRTRVNQLEKECLYLKKVIAKIDKESLLKAKHGAGKWS-IGKKFGCKF 547


>AT5G48800.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:19786881-19789003 FORWARD LENGTH=614
          Length = 614

 Score =  341 bits (875), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 215/567 (37%), Positives = 310/567 (54%), Gaps = 74/567 (13%)

Query: 23  LPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKS---VLELHDLPGGAKAFL 79
           +PSD+ IE+   +F LHKFPL+SRS    G ++ + +E+  S    +EL +LPGGA+ F 
Sbjct: 41  VPSDITIEVNGGNFALHKFPLVSRS----GRIRRIVAEHRDSDISKVELLNLPGGAETFE 96

Query: 80  LVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNHIYGYWTD-TLK 138
           L AKFCYG+  E+T SNV  L C SDYL+M+E+Y + NL  +TE +L  I     +  ++
Sbjct: 97  LAAKFCYGINFEITSSNVAQLFCVSDYLEMTEEYSKDNLASRTEEYLESIVCKNLEMCVQ 156

Query: 139 ALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLV-----ILPISSGPTSIVQSPEDHGD 193
            LK  E +LP A+EL+I  R I ++  KA    +      +   SSG   + +  +  GD
Sbjct: 157 VLKQSEILLPLADELNIIGRCIDAIASKACAEQIASSFSRLEYSSSGRLHMSRQVKSSGD 216

Query: 194 LWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIP 253
                        G DWW ED+  L + LY+R M     R ++P  I  SLV YA++ + 
Sbjct: 217 -------------GGDWWIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYAERELT 263

Query: 254 XXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXX 313
                                 ++ ++E +V LLP E  + P  FL   LR A+ L    
Sbjct: 264 KRSEH-----------------EQTIVETIVTLLPVENLVVPISFLFGLLRRAVILDTSV 306

Query: 314 XXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHFMIVDHDDVDSTSN 373
                LE+R+GSQLD A L+DLLIP+  ++ +TL DID V R+L +F            +
Sbjct: 307 SCRLDLERRLGSQLDMATLDDLLIPSFRHAGDTLFDIDTVHRILVNF-------SQQGGD 359

Query: 374 DIEEERRLVAGPQRLSP----MAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYART 429
           D E+E  +       SP    M KVA+L+D YLAE+APD NL L KF  +A  +P +ART
Sbjct: 360 DSEDEESVFECDSPHSPSQTAMFKVAKLVDSYLAEIAPDANLDLSKFLLIAEALPPHART 419

Query: 430 LDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLF 489
           L DG+YRAID+YLK H  ++DS+K+++ +L++ QKLS EA  HAAQNERLPL+ +VQVL+
Sbjct: 420 LHDGLYRAIDLYLKAHQGLSDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLY 479

Query: 490 FEQLKLRTSVA----------------GWFFTSENLENTQNLSGNLALLRNIDGNTPPNP 533
           FEQLKLR+S+                  W   S  L  T +   N A LR  +       
Sbjct: 480 FEQLKLRSSLCSSYSDEEPKPKQQQQQSWRINSGALSATMSPKDNYASLRRENRELK--- 536

Query: 534 VLAFDNMKDRVSELEKECLTMKHELEK 560
            L    ++ R+++LEKE + MK ++++
Sbjct: 537 -LELARLRMRLNDLEKEHICMKRDMQR 562


>AT3G08660.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:2631130-2633166 FORWARD LENGTH=582
          Length = 582

 Score =  309 bits (791), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 200/574 (34%), Positives = 306/574 (53%), Gaps = 75/574 (13%)

Query: 21  SGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKSVLELHDLPGGAKAFLL 80
           S +  D+I+ +   SF LHKFPL++RS  +   ++DL  ++  S++EL D PGG   F L
Sbjct: 32  SDVAGDIIVVVDGESFLLHKFPLVARSGKMRKMVRDL--KDSSSMIELRDFPGGPSTFEL 89

Query: 81  VAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNHI-YGYWTDTLKA 139
             KFCYG+  ++T  NVV LRCA+ YL+M+EDY E NLI + EN+L+ I +  + +++  
Sbjct: 90  TMKFCYGINFDITAFNVVSLRCAAGYLEMTEDYKEQNLIFRAENYLDQIVFRSFHESVLV 149

Query: 140 LKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPTSIVQSPEDHGDLWNGIS 199
           L +CE     AE   I  R + ++ + A    LV                         S
Sbjct: 150 LCSCE-TQEIAETYEIPDRCVEAIAMNACRKQLV-------------------------S 183

Query: 200 LTSKETTGED---WWFEDVCSLSLPLYKRFMLGAIAR-HMKPRRIAGSLVYYAKKHIPXX 255
             S+E  G D    W E++ +L +  Y + ++ A+AR  ++   I  SLV+YAK  +   
Sbjct: 184 GLSEELKGRDCLEMWTEELSALGIDYYVQ-VVSAMARLSVRSESIVASLVHYAKTSLKGI 242

Query: 256 XXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPN-EKG-----LTPTKFLLRSLRTAMAL 309
                              +QR ++E MV LLPN EKG     + P  FL   L+    +
Sbjct: 243 IDRNCQ-------------EQRKIVEAMVNLLPNDEKGSYSLSIIPLGFLFGMLKVGTII 289

Query: 310 YXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHFM--IVDHDD 367
                    LE+RIG QL+ A L+DLLIP++  + ++++D+D V R+L  F+  I + DD
Sbjct: 290 DIEISCRLELERRIGHQLETASLDDLLIPSV-QNEDSMYDVDTVHRILTFFLERIEEEDD 348

Query: 368 VDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYA 427
                +D            + S + KV  +MD YL E+APD  L L KF ++   +P+++
Sbjct: 349 ECGYDSD---------STGQHSSLLKVGRIMDAYLVEIAPDPYLSLHKFTAIIETLPEHS 399

Query: 428 RTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQV 487
           R +DDGIYRAID+YLK HP +T+ E++++C  ++C+KLS EAS H AQN+RLP+++VV+V
Sbjct: 400 RIVDDGIYRAIDMYLKAHPLLTEEERKKLCNFIDCKKLSQEASNHVAQNDRLPVQMVVRV 459

Query: 488 LFFEQLKLRTSVAG------WFFTSENLENTQNLSGNLALLRNIDGNTPPNPVLAFDNMK 541
           L+ EQL+L+ +++G      W   S       +     A LR  +        L    M+
Sbjct: 460 LYTEQLRLKKALSGDSEEGSWVLPSGVQSRAVSPRDTYAALRRENRELK----LEISRMR 515

Query: 542 DRVSELEKECLTMKHELEKMMKSNKGSWNMILRK 575
            RVSELEKE   MKHE+ +   +N G++   L K
Sbjct: 516 VRVSELEKEHNLMKHEMMEKSGNNGGTFLTSLSK 549


>AT5G67385.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:26884754-26887083 FORWARD LENGTH=604
          Length = 604

 Score =  308 bits (788), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 169/489 (34%), Positives = 282/489 (57%), Gaps = 32/489 (6%)

Query: 17  WLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKSVLELHDLPGGAK 76
           W+    + SDV + +G+ SF LHKFPL+S+   ++  + + S +++ +V+++ D+PGG++
Sbjct: 19  WISSQEVSSDVTVHVGEASFSLHKFPLMSKCGFIKKLVSESSKDSDSTVIKIPDIPGGSE 78

Query: 77  AFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNHI-YGYWTD 135
           AF L AKFCYG+  +++  N+ +LRCA++YL+M+E++   NL+++ E +LN +     + 
Sbjct: 79  AFELAAKFCYGINFDMSTENIAMLRCAAEYLEMTEEHSVENLVVRAEAYLNEVALKSLSS 138

Query: 136 TLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPTS---IVQSPEDHG 192
           ++  L   E++LP AE + + SR I ++       S    P SS   +   +VQ      
Sbjct: 139 SITVLHKSEKLLPIAERVKLVSRCIDAIAYMTCQESHFCSPSSSNSGNNEVVVQQQSKQP 198

Query: 193 DLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHI 252
            +              DWW ED+  L +  ++R ++  +AR  K   +   L+ YA+K +
Sbjct: 199 VV--------------DWWAEDLTVLRIDSFQRVLIAMMARGFKQYGLGPVLMLYAQKSL 244

Query: 253 PXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXX 312
                               E ++R ++E +V LLP EK      FL   LR A+ L   
Sbjct: 245 ---RGLEIFGKGMKKIEPKQEHEKRVILETIVSLLPREKNAMSVSFLSMLLRAAIFLETT 301

Query: 313 XXXXXXLEKRIGSQLDEADLEDLLIPNIGYSME-TLHDIDCVQRMLDHFMIVDHDDVDST 371
                 LE R+G QL +A L+DLLIP+  ++ + ++ D D VQR+L +++  + + V  +
Sbjct: 302 VACRLDLENRMGLQLGQAVLDDLLIPSYSFTGDHSMFDTDTVQRILMNYLEFEVEGVRLS 361

Query: 372 SNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLD 431
           +N ++     +AG      M +V +L++ Y+AE+A D N+ L KF  LA L+P+ +R  +
Sbjct: 362 NNGVD-----LAGD-----MERVGKLLENYMAEIASDRNVSLQKFIGLAELIPEQSRVTE 411

Query: 432 DGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFE 491
           DG+YRA+DIYLK HP M+D E++++C LM+CQKLS EA  HAAQN+RLP++ +VQVL++E
Sbjct: 412 DGMYRAVDIYLKAHPNMSDVERKKVCSLMDCQKLSREACAHAAQNDRLPVQTIVQVLYYE 471

Query: 492 QLKLRTSVA 500
           Q +LR  V 
Sbjct: 472 QQRLRGEVT 480


>AT1G67900.3 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:25467737-25469888 FORWARD LENGTH=631
          Length = 631

 Score =  303 bits (776), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 198/559 (35%), Positives = 293/559 (52%), Gaps = 46/559 (8%)

Query: 1   MKLGSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSE 60
           MKLGS+ + FY   +     S + SD  IE+  + + LHKFPL+S+   L+     + SE
Sbjct: 4   MKLGSRPDTFYTSEDLRCVSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQ----RMCSE 59

Query: 61  NEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLII 120
           + +S+++L + PGG +AF L AKFCYG+ + ++  N+V  RCA++YLQMSE+  +GNL+ 
Sbjct: 60  SPESIIQLPEFPGGVEAFELCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGNLVY 119

Query: 121 QTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKA-ADPSLVILPIS 178
           + E F N  I   W D++  L+T +    ++E+L ITSR I ++  K  + PS V L  S
Sbjct: 120 KLEVFFNSCILNGWRDSIVTLQTTKAFPLWSEDLAITSRCIEAIASKVLSHPSKVSLSHS 179

Query: 179 SGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPR 238
                   S     D    +S      +   WW ED+  L + LY R M+   +    P 
Sbjct: 180 -------HSRRVRDD---DMSSNRAAASSRGWWAEDIAELGIDLYWRTMIAIKSGGKVPA 229

Query: 239 RIAG-SLVYYAKKHIPXXXXXXXXXXXX----XXXXXXXEADQRNLIEEMVELLPNEKGL 293
            + G +L  YA K +P                        +  R L+E ++ LLP EKG 
Sbjct: 230 SLIGDALRVYASKWLPTLQRNRKVVKKKEDSDSDSDTDTSSKHRLLLESIISLLPAEKGA 289

Query: 294 TPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCV 353
               FLL+ L+ A  L         L +R+  QL+EA + DLLIP + Y  E L+D+D V
Sbjct: 290 VSCSFLLKLLKAANILNASTSSKMELARRVALQLEEATVSDLLIPPMSYKSELLYDVDIV 349

Query: 354 QRMLDHFMIVDHDDVDST-------------------SNDIEEERRLVAGPQRLSPMAKV 394
             +L+ FM+       ++                   + D+E +    +     S   KV
Sbjct: 350 ATILEQFMVQGQTSPPTSPLRGKKGMMDRRRRSRSAENIDLEFQESRRSSSASHSSKLKV 409

Query: 395 AELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKE 454
           A+L+DGYL ++A DVNL L KF +LA  VP+++R   D +YRAIDIYLK H  +  SE++
Sbjct: 410 AKLVDGYLQQIARDVNLPLSKFVTLAESVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERK 469

Query: 455 QICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFTSENLENTQN 514
           ++CR+++C+KLS+EA  HAAQNE LPLRVVVQVLF+EQ +   +      T+   +NT  
Sbjct: 470 RVCRVLDCKKLSMEACMHAAQNEMLPLRVVVQVLFYEQARAAAA------TNNGEKNTTE 523

Query: 515 LSGNLALLRNIDGNTPPNP 533
           L  N+  L       P NP
Sbjct: 524 LPSNIKALLAAHNIDPSNP 542


>AT1G67900.2 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:25467737-25469888 FORWARD LENGTH=631
          Length = 631

 Score =  303 bits (776), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 198/559 (35%), Positives = 293/559 (52%), Gaps = 46/559 (8%)

Query: 1   MKLGSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSE 60
           MKLGS+ + FY   +     S + SD  IE+  + + LHKFPL+S+   L+     + SE
Sbjct: 4   MKLGSRPDTFYTSEDLRCVSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQ----RMCSE 59

Query: 61  NEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLII 120
           + +S+++L + PGG +AF L AKFCYG+ + ++  N+V  RCA++YLQMSE+  +GNL+ 
Sbjct: 60  SPESIIQLPEFPGGVEAFELCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGNLVY 119

Query: 121 QTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKA-ADPSLVILPIS 178
           + E F N  I   W D++  L+T +    ++E+L ITSR I ++  K  + PS V L  S
Sbjct: 120 KLEVFFNSCILNGWRDSIVTLQTTKAFPLWSEDLAITSRCIEAIASKVLSHPSKVSLSHS 179

Query: 179 SGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPR 238
                   S     D    +S      +   WW ED+  L + LY R M+   +    P 
Sbjct: 180 -------HSRRVRDD---DMSSNRAAASSRGWWAEDIAELGIDLYWRTMIAIKSGGKVPA 229

Query: 239 RIAG-SLVYYAKKHIPXXXXXXXXXXXX----XXXXXXXEADQRNLIEEMVELLPNEKGL 293
            + G +L  YA K +P                        +  R L+E ++ LLP EKG 
Sbjct: 230 SLIGDALRVYASKWLPTLQRNRKVVKKKEDSDSDSDTDTSSKHRLLLESIISLLPAEKGA 289

Query: 294 TPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCV 353
               FLL+ L+ A  L         L +R+  QL+EA + DLLIP + Y  E L+D+D V
Sbjct: 290 VSCSFLLKLLKAANILNASTSSKMELARRVALQLEEATVSDLLIPPMSYKSELLYDVDIV 349

Query: 354 QRMLDHFMIVDHDDVDST-------------------SNDIEEERRLVAGPQRLSPMAKV 394
             +L+ FM+       ++                   + D+E +    +     S   KV
Sbjct: 350 ATILEQFMVQGQTSPPTSPLRGKKGMMDRRRRSRSAENIDLEFQESRRSSSASHSSKLKV 409

Query: 395 AELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKE 454
           A+L+DGYL ++A DVNL L KF +LA  VP+++R   D +YRAIDIYLK H  +  SE++
Sbjct: 410 AKLVDGYLQQIARDVNLPLSKFVTLAESVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERK 469

Query: 455 QICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFTSENLENTQN 514
           ++CR+++C+KLS+EA  HAAQNE LPLRVVVQVLF+EQ +   +      T+   +NT  
Sbjct: 470 RVCRVLDCKKLSMEACMHAAQNEMLPLRVVVQVLFYEQARAAAA------TNNGEKNTTE 523

Query: 515 LSGNLALLRNIDGNTPPNP 533
           L  N+  L       P NP
Sbjct: 524 LPSNIKALLAAHNIDPSNP 542


>AT1G67900.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:25467737-25469888 FORWARD LENGTH=631
          Length = 631

 Score =  303 bits (776), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 198/559 (35%), Positives = 293/559 (52%), Gaps = 46/559 (8%)

Query: 1   MKLGSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSE 60
           MKLGS+ + FY   +     S + SD  IE+  + + LHKFPL+S+   L+     + SE
Sbjct: 4   MKLGSRPDTFYTSEDLRCVSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQ----RMCSE 59

Query: 61  NEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLII 120
           + +S+++L + PGG +AF L AKFCYG+ + ++  N+V  RCA++YLQMSE+  +GNL+ 
Sbjct: 60  SPESIIQLPEFPGGVEAFELCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGNLVY 119

Query: 121 QTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKA-ADPSLVILPIS 178
           + E F N  I   W D++  L+T +    ++E+L ITSR I ++  K  + PS V L  S
Sbjct: 120 KLEVFFNSCILNGWRDSIVTLQTTKAFPLWSEDLAITSRCIEAIASKVLSHPSKVSLSHS 179

Query: 179 SGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPR 238
                   S     D    +S      +   WW ED+  L + LY R M+   +    P 
Sbjct: 180 -------HSRRVRDD---DMSSNRAAASSRGWWAEDIAELGIDLYWRTMIAIKSGGKVPA 229

Query: 239 RIAG-SLVYYAKKHIPXXXXXXXXXXXX----XXXXXXXEADQRNLIEEMVELLPNEKGL 293
            + G +L  YA K +P                        +  R L+E ++ LLP EKG 
Sbjct: 230 SLIGDALRVYASKWLPTLQRNRKVVKKKEDSDSDSDTDTSSKHRLLLESIISLLPAEKGA 289

Query: 294 TPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCV 353
               FLL+ L+ A  L         L +R+  QL+EA + DLLIP + Y  E L+D+D V
Sbjct: 290 VSCSFLLKLLKAANILNASTSSKMELARRVALQLEEATVSDLLIPPMSYKSELLYDVDIV 349

Query: 354 QRMLDHFMIVDHDDVDST-------------------SNDIEEERRLVAGPQRLSPMAKV 394
             +L+ FM+       ++                   + D+E +    +     S   KV
Sbjct: 350 ATILEQFMVQGQTSPPTSPLRGKKGMMDRRRRSRSAENIDLEFQESRRSSSASHSSKLKV 409

Query: 395 AELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKE 454
           A+L+DGYL ++A DVNL L KF +LA  VP+++R   D +YRAIDIYLK H  +  SE++
Sbjct: 410 AKLVDGYLQQIARDVNLPLSKFVTLAESVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERK 469

Query: 455 QICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFTSENLENTQN 514
           ++CR+++C+KLS+EA  HAAQNE LPLRVVVQVLF+EQ +   +      T+   +NT  
Sbjct: 470 RVCRVLDCKKLSMEACMHAAQNEMLPLRVVVQVLFYEQARAAAA------TNNGEKNTTE 523

Query: 515 LSGNLALLRNIDGNTPPNP 533
           L  N+  L       P NP
Sbjct: 524 LPSNIKALLAAHNIDPSNP 542


>AT3G08570.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:2602258-2604412 REVERSE LENGTH=617
          Length = 617

 Score =  301 bits (772), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 202/598 (33%), Positives = 318/598 (53%), Gaps = 49/598 (8%)

Query: 21  SGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLS-SENEKSVLELHDLPGGAKAFL 79
           S +  D+ I +   SF LHKFPL++R   +   + ++  S +  S  EL D PGG+K F 
Sbjct: 32  SDVAGDITIVVDGESFLLHKFPLVARCGKIRKMVAEMKESSSNLSHTELRDFPGGSKTFE 91

Query: 80  LVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNHI-YGYWTDTLK 138
           L  KFCYG+  E+T SNVV +RCA+ YL+M+ED+ E NLI +TE +L  + +     +++
Sbjct: 92  LAMKFCYGINFEITISNVVAIRCAAGYLEMTEDFKEENLIARTETYLEQVAFRSLEKSVE 151

Query: 139 ALKTCEEVLP--FAEELHITSRSIHSLVLKAADPSLVILPISSGPTSIVQSPEDHGDLWN 196
            L +CE + P   AE  HI  R + ++ + A    LV+     G + + +  E  G+L  
Sbjct: 152 VLCSCETLYPQDIAETAHIPDRCVEAIAVNACREQLVL-----GLSRLNRGTES-GELKR 205

Query: 197 GISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIAR-HMKPRRIAGSLVYYAKKHIPXX 255
           G S         +WW ED+ +L +  Y R ++ A+AR  ++   I  SL++YA++ +   
Sbjct: 206 GDS--------PEWWIEDLSALRIDYYAR-VVSAMARTGLRSESIITSLMHYAQESLKGI 256

Query: 256 XXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXXXX 315
                            E +QRN++E +V L PN+    P  FL   LR  + +      
Sbjct: 257 RNCKERTKLDSGTF---ENEQRNVLEAIVSLFPNDN--VPLSFLFGMLRVGITINVAISC 311

Query: 316 XXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHFMI-VDHDDVDSTSND 374
              LE+RI  QL+   L+DLLIP +    ++++D+D V R+L  F+  ++ ++       
Sbjct: 312 RLELERRIAQQLETVSLDDLLIPVV-RDGDSMYDVDTVHRILVCFLKKIEEEEEYDEDCC 370

Query: 375 IEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGI 434
            E E   + G    S + KV  +MD YLAE+APD  L L KF +L  ++PDYAR +DDG+
Sbjct: 371 YENETENLTGSMCHSSLLKVGRIMDAYLAEIAPDPCLSLHKFMALIEILPDYARVMDDGL 430

Query: 435 YRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLK 494
           YRAID++LK HP + + E + +C+ ++ QKLS EA  H AQN+RLP+++VV+VL+ EQL+
Sbjct: 431 YRAIDMFLKGHPSLNEQECKSLCKFIDTQKLSQEACNHVAQNDRLPMQMVVRVLYSEQLR 490

Query: 495 LRTSVAG----------WFFTSENLENTQNLSGNLALLRNIDGNTPPNPVLAFDNMKDRV 544
           ++  ++G             +SEN     +     A LR  +        L    ++ R+
Sbjct: 491 MKNVMSGESGEGLLLSSQKHSSENPSRAVSPRDTYASLRRENRELK----LEISRVRVRL 546

Query: 545 SELEKECLTMKHELEKMMKSNKG-----SWNMILRKLSCRLIPKPSNGKVSKPCRKSK 597
           +ELEKE + MK  +  M KS  G     S +  + ++S      P+ GK+    RKSK
Sbjct: 547 TELEKEQILMKQGM--MEKSGHGGTLLTSLSKGIGRISI-FGGGPTEGKLRNANRKSK 601


>AT2G47860.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr2:19599979-19602088 FORWARD LENGTH=635
          Length = 635

 Score =  301 bits (770), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 204/582 (35%), Positives = 319/582 (54%), Gaps = 54/582 (9%)

Query: 21  SGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKSVLELHDLPGGAKAFLL 80
           S + SD+ IE+G  +F LHKFPL+SRS    G ++ L  E++ + L L  +PGG+++F L
Sbjct: 35  SDVTSDLTIEVGSATFSLHKFPLVSRS----GRIRKLVLESKDTNLNLAAVPGGSESFEL 90

Query: 81  VAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFL-NHIYGYWTDTLKA 139
            AKFCYGV ++   SN+  LRC + YL+M+ED  E NL  +TE +L + I+   ++++  
Sbjct: 91  AAKFCYGVGVQYNSSNIAALRCVAHYLEMTEDLSEKNLEARTEAYLKDSIFNDISNSITV 150

Query: 140 LKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPTSIVQSPEDHGDLWNGIS 199
           L +CE +LP AEE+++  R ++++ + A    L     +SG   + QS         G+ 
Sbjct: 151 LHSCERLLPVAEEINLVGRLVNAIAVNACKEQL-----ASGLLKLDQS------FSCGVP 199

Query: 200 LTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIPXXXXXX 259
            T+K     DWW   +  L L  ++R +    ++ +    I+  L+ YA+K +       
Sbjct: 200 ETAKPC---DWWGRSLPILKLDFFQRVLSAMKSKGLNHDIISDILMSYARKSL-----QI 251

Query: 260 XXXXXXXXXXXXXEADQRNLIEEMVELLPNE--KGLTPTKFLLRSLRTAMALYXXXXXXX 317
                        +  QR ++E +V LLP +  K   P  FL   L+TA+          
Sbjct: 252 IREPNLVKSDSDLQRKQRIVLEAVVGLLPTQANKSSIPISFLSSLLKTAIGSGTSVSCRS 311

Query: 318 XLEKRIGSQLDEADLEDLLIP-NIGYSMETLHDIDCVQRMLDHFMIVDHDDVDSTSNDIE 376
            LE+RI   LD+A LED+LIP NIG     ++D D VQR+   F+ +D  +     +D E
Sbjct: 312 DLERRISHLLDQAILEDILIPANIG----AMYDTDSVQRIFSMFLNLDECEYRDDDDDEE 367

Query: 377 EERRLV---------AGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYA 427
           +              A   + S + KV++LMD YLAEVA D +L   KF +LA L+PD+A
Sbjct: 368 DAVDESEMAMYDFEGAESPKQSSIFKVSKLMDSYLAEVALDSSLPPSKFIALAELLPDHA 427

Query: 428 RTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQV 487
           R + DG+YRA+DI+LK HP M DSE+ ++C+ ++C+KLS +AS+HAAQNERLP+++ VQV
Sbjct: 428 RVVCDGLYRAVDIFLKVHPHMKDSERYRLCKTVSCKKLSQDASSHAAQNERLPVQIAVQV 487

Query: 488 LFFEQLKLRTSVA----------GWFFTSENLENTQNLSGNLALLRNIDGNTPPNPVLAF 537
           LF+EQ +L+ ++             FF   N   +   SG ++   N       N  L  
Sbjct: 488 LFYEQTRLKNAMTSGGGTGGSNQSQFFLFPNRSGSGMASGAISPRDNYASVRRENRELRL 547

Query: 538 D--NMKDRVSELEKECLTMKHELEKMMKSNKGSWNMILRKLS 577
           +   M+ R+++LEK+ ++MK +  K  +S +  + M LRKLS
Sbjct: 548 EVARMRMRLTDLEKDHVSMKRDFVK-PQSRRRRYGM-LRKLS 587


>AT4G37590.1 | Symbols: NPY5 | Phototropic-responsive NPH3 family
           protein | chr4:17663080-17665299 REVERSE LENGTH=580
          Length = 580

 Score =  297 bits (760), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 191/508 (37%), Positives = 280/508 (55%), Gaps = 60/508 (11%)

Query: 1   MKLGSKSEMFYLYGES-WLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMK-DLS 58
           MKLGSK + F   G++     S L +DVI+ IGD  F+LHKFPL+S+S  L+  +    S
Sbjct: 4   MKLGSKPDSFQSEGDNVRYVSSELATDVIVIIGDVKFYLHKFPLLSKSARLQKLITTSTS 63

Query: 59  SENEKS---------VLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQM 109
           S NE++          +E+ ++PGG  +F + AKFCYG+ + L   NVV  RCA+++L+M
Sbjct: 64  SSNEENQIHHHHHEDEIEIAEIPGGPASFEICAKFCYGMTVTLNAYNVVAARCAAEFLEM 123

Query: 110 SEDYGEGNLIIQTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAA 168
            E   +GNL+ + E FLN  I   W D++  L+T   + P++EEL +T R + S+  +A+
Sbjct: 124 YETVEKGNLVYKIEVFLNSSILQSWKDSIIVLQTTRALSPYSEELKLTGRCLDSIASRAS 183

Query: 169 DPSLVILPISSGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFML 228
                   I +       +     +L NG  L   +    DWW ED+C L + LYKR + 
Sbjct: 184 --------IDTSKVEWSYTYSKKKNLDNG--LRKPQAVPRDWWVEDLCDLHIDLYKRALA 233

Query: 229 GAIAR-HMKPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELL 287
              AR ++    I  +L  YA K IP                    A  R L + ++EL+
Sbjct: 234 TIEARGNVSADVIGEALHAYAIKRIPGFSKSSSVQVTDF-------AKYRALADSIIELI 286

Query: 288 PNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETL 347
           P+EK    + FL + LR +  ++        L+ R+G +LDEA+L D+L          L
Sbjct: 287 PDEKRSVSSSFLTKLLRAS--IFLGCDEVAGLKNRVGERLDEANLGDVL----------L 334

Query: 348 HDIDCVQRMLDHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAP 407
           +D++ +Q +++ F+          S D  E+         ++  A VA+L+DGYLAE + 
Sbjct: 335 YDVELMQSLVEVFL---------KSRDPREDD--------VTAKASVAKLVDGYLAEKSR 377

Query: 408 DV-NLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLS 466
           D  NL L KF SLA +V  + R   DG+YRAID++LK HP M  SEK++ICRLM+C+KLS
Sbjct: 378 DSDNLPLQKFLSLAEMVSSFPRQSHDGVYRAIDMFLKEHPEMNKSEKKRICRLMDCRKLS 437

Query: 467 LEASTHAAQNERLPLRVVVQVLFFEQLK 494
            EA  HA QNERLP+RVVVQVLFFEQ++
Sbjct: 438 AEACAHAVQNERLPMRVVVQVLFFEQVR 465


>AT1G03010.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:693480-696188 FORWARD LENGTH=634
          Length = 634

 Score =  296 bits (757), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 197/575 (34%), Positives = 324/575 (56%), Gaps = 48/575 (8%)

Query: 21  SGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKSVLELHDLPGGAKAFLL 80
           S + SD+ +++G +SF LHKFPL+SRS    G ++ L ++ + S + L + PGG++AF L
Sbjct: 34  SDVSSDLTVQVGSSSFCLHKFPLVSRS----GKIRKLLADPKISNVCLSNAPGGSEAFEL 89

Query: 81  VAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNH-IYGYWTDTLKA 139
            AKFCYG+ +E+   N+  LRCAS YL+M+ED+ E NL  +TE+FL   I+    +++  
Sbjct: 90  AAKFCYGINIEINLLNIAKLRCASHYLEMTEDFSEENLASKTEHFLKETIFPSILNSIIV 149

Query: 140 LKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPTSIVQSPEDHGDLWNGIS 199
           L  CE ++P +E+L++ +R I ++   A    L     +SG   +  S       ++G +
Sbjct: 150 LHHCETLIPVSEDLNLVNRLIIAVANNACKEQL-----TSGLLKLDYS-------FSGTN 197

Query: 200 LTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIPXXXXXX 259
           +  +  T  DWW + +  L+L  ++R +    ++ +    I+  L+ Y  K +       
Sbjct: 198 IEPQ--TPLDWWGKSLAVLNLDFFQRVISAVKSKGLIQDVISKILISYTNKSLQGLIVRD 255

Query: 260 XXXXXXXXXXXXXEADQRNLIEEMVELLPNE--KGLTPTKFLLRSLRTAMALYXXXXX-- 315
                        +  QR ++E +V LLP +  +   P  FL   L+  +A         
Sbjct: 256 PKLEKERVLDSEGKKKQRLIVETIVRLLPTQGRRSSVPMAFLSSLLKMVIATSSSASTGS 315

Query: 316 -XXXLEKRIGSQLDEADLEDLLIP-NIGYSMETLHDIDCVQRMLDHFMIVDHDDVDSTSN 373
               LE+RIG QLD+A LED+LIP N+  +  T++DID + R+   F+ +D DD +   +
Sbjct: 316 CRSDLERRIGLQLDQAILEDVLIPINLNGTNNTMYDIDSILRIFSIFLNLDEDDEEEEHH 375

Query: 374 DIE--EERRLV-----AGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDY 426
            ++  +E  ++      G  + S + KV++LMD YLAE+A D NL   KF +LA L+PD+
Sbjct: 376 HLQFRDETEMIYDFDSPGSPKQSSILKVSKLMDNYLAEIAMDPNLTTSKFIALAELLPDH 435

Query: 427 ARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQ 486
           AR + DG+YRA+DIYLK HP + DSE+ ++C+ ++ QKLS EA +HAAQNERLP+++ VQ
Sbjct: 436 ARIISDGLYRAVDIYLKVHPNIKDSERYRLCKTIDSQKLSQEACSHAAQNERLPVQMAVQ 495

Query: 487 VLFFEQLKLRTSVAGWFFTSENLENTQ-----------NLSGNLALLRNIDGNTPPNPVL 535
           VL+FEQ++LR +++     ++ L N+              SG ++   N       N  L
Sbjct: 496 VLYFEQIRLRNAMSSSIGPTQFLFNSNCHQFPQRSGSGAGSGAISPRDNYASVRRENREL 555

Query: 536 AFD--NMKDRVSELEKECLTMKHELEKMMKSNKGS 568
             +   M+ R+++LEK+ +++K EL   +KSN G+
Sbjct: 556 KLEVARMRMRLTDLEKDHISIKQEL---VKSNPGT 587


>AT5G67440.1 | Symbols: NPY3 | Phototropic-responsive NPH3 family
           protein | chr5:26912947-26914906 REVERSE LENGTH=579
          Length = 579

 Score =  293 bits (749), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 192/513 (37%), Positives = 286/513 (55%), Gaps = 53/513 (10%)

Query: 1   MKLGSKSEMFYLYGES-WLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSS 59
           MKLGSK + F    +      + L +DV++ +GD  FHLHKFPL+S+S  L+  +   ++
Sbjct: 4   MKLGSKPDSFQSDEDCVRYVATELATDVVVIVGDVKFHLHKFPLLSKSARLQKLIATTTT 63

Query: 60  ENEKSVLELH--DLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGN 117
           + +    E+   D+PGG  AF + AKFCYG+ + L   NVV +RCA++YL+M E    GN
Sbjct: 64  DEQSDDDEIRIPDIPGGPPAFEICAKFCYGMAVTLNAYNVVAVRCAAEYLEMYESIENGN 123

Query: 118 LIIQTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAA-DPSLVIL 175
           L+ + E FLN  +   W D++  L+T     P++E++ +  R + S+ LKAA DP+ V  
Sbjct: 124 LVYKMEVFLNSSVLRSWKDSIIVLQTTRSFYPWSEDVKLDVRCLESIALKAAMDPARV-- 181

Query: 176 PISSGPTSIVQSPEDHGDLWNGISLTSKE----TTGEDWWFEDVCSLSLPLYKRFMLGAI 231
                         D    +N   L   E    +   DWW ED+  LS+ L+KR ++  I
Sbjct: 182 --------------DWSYTYNRRKLLPPEMNNNSVPRDWWVEDLAELSIDLFKR-VVSTI 226

Query: 232 ARH--MKPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPN 289
            R   + P  I  +L  YA K IP                     +QR+L+E +V +LP+
Sbjct: 227 RRKGGVLPEVIGEALEVYAAKRIPGFMIQNDDNDDEEDVM-----EQRSLLETLVSMLPS 281

Query: 290 EKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLI--PNIGYSMETL 347
           EK      FL++ L+++++          L +RIG +L+EA++ DLLI  P  G   ET+
Sbjct: 282 EKQSVSCGFLIKLLKSSVSFECGEEERKELSRRIGEKLEEANVGDLLIRAPEGG---ETV 338

Query: 348 HDIDCVQRMLDHFMIV--DHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEV 405
           +DID V+ ++D F+      D++D  S+DI +           S  A VA+L+DGYLAE+
Sbjct: 339 YDIDIVETLIDEFVTQTEKRDELD-CSDDIND-----------SSKANVAKLIDGYLAEI 386

Query: 406 AP-DVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQK 464
           +  + NL   KF ++A  V  + R   DG+YRAID++LK HP +T SEK+   +LM+C+K
Sbjct: 387 SRIETNLSTTKFITIAEKVSTFPRQSHDGVYRAIDMFLKQHPGITKSEKKSSSKLMDCRK 446

Query: 465 LSLEASTHAAQNERLPLRVVVQVLFFEQLKLRT 497
           LS EA  HA QNERLPLRVVVQ+LFFEQ++  T
Sbjct: 447 LSPEACAHAVQNERLPLRVVVQILFFEQVRATT 479


>AT2G47860.3 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr2:19599979-19602088 FORWARD LENGTH=658
          Length = 658

 Score =  288 bits (736), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 204/605 (33%), Positives = 319/605 (52%), Gaps = 77/605 (12%)

Query: 21  SGLPSDVIIEIGDTSFHLHK-----------------------FPLISRSKVLEGYMKDL 57
           S + SD+ IE+G  +F LHK                       FPL+SRS    G ++ L
Sbjct: 35  SDVTSDLTIEVGSATFSLHKVTKFNKLRRKKRNCFTQTRSLLQFPLVSRS----GRIRKL 90

Query: 58  SSENEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGN 117
             E++ + L L  +PGG+++F L AKFCYGV ++   SN+  LRC + YL+M+ED  E N
Sbjct: 91  VLESKDTNLNLAAVPGGSESFELAAKFCYGVGVQYNSSNIAALRCVAHYLEMTEDLSEKN 150

Query: 118 LIIQTENFL-NHIYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILP 176
           L  +TE +L + I+   ++++  L +CE +LP AEE+++  R ++++ + A    L    
Sbjct: 151 LEARTEAYLKDSIFNDISNSITVLHSCERLLPVAEEINLVGRLVNAIAVNACKEQL---- 206

Query: 177 ISSGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMK 236
            +SG   + QS         G+  T+K     DWW   +  L L  ++R +    ++ + 
Sbjct: 207 -ASGLLKLDQS------FSCGVPETAKPC---DWWGRSLPILKLDFFQRVLSAMKSKGLN 256

Query: 237 PRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNE--KGLT 294
              I+  L+ YA+K +                    +  QR ++E +V LLP +  K   
Sbjct: 257 HDIISDILMSYARKSL-----QIIREPNLVKSDSDLQRKQRIVLEAVVGLLPTQANKSSI 311

Query: 295 PTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIP-NIGYSMETLHDIDCV 353
           P  FL   L+TA+           LE+RI   LD+A LED+LIP NIG     ++D D V
Sbjct: 312 PISFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQAILEDILIPANIG----AMYDTDSV 367

Query: 354 QRMLDHFMIVDHDDVDSTSNDIEEERRLV---------AGPQRLSPMAKVAELMDGYLAE 404
           QR+   F+ +D  +     +D E+              A   + S + KV++LMD YLAE
Sbjct: 368 QRIFSMFLNLDECEYRDDDDDEEDAVDESEMAMYDFEGAESPKQSSIFKVSKLMDSYLAE 427

Query: 405 VAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQK 464
           VA D +L   KF +LA L+PD+AR + DG+YRA+DI+LK HP M DSE+ ++C+ ++C+K
Sbjct: 428 VALDSSLPPSKFIALAELLPDHARVVCDGLYRAVDIFLKVHPHMKDSERYRLCKTVSCKK 487

Query: 465 LSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVA----------GWFFTSENLENTQN 514
           LS +AS+HAAQNERLP+++ VQVLF+EQ +L+ ++             FF   N   +  
Sbjct: 488 LSQDASSHAAQNERLPVQIAVQVLFYEQTRLKNAMTSGGGTGGSNQSQFFLFPNRSGSGM 547

Query: 515 LSGNLALLRNIDGNTPPNPVLAFD--NMKDRVSELEKECLTMKHELEKMMKSNKGSWNMI 572
            SG ++   N       N  L  +   M+ R+++LEK+ ++MK +  K  +S +  + M 
Sbjct: 548 ASGAISPRDNYASVRRENRELRLEVARMRMRLTDLEKDHVSMKRDFVK-PQSRRRRYGM- 605

Query: 573 LRKLS 577
           LRKLS
Sbjct: 606 LRKLS 610


>AT2G30520.1 | Symbols: RPT2 | Phototropic-responsive NPH3 family
           protein | chr2:13002920-13005573 REVERSE LENGTH=593
          Length = 593

 Score =  285 bits (728), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 161/489 (32%), Positives = 267/489 (54%), Gaps = 42/489 (8%)

Query: 17  WLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKSVLELHDLPGGAK 76
           W+    +P+DV++E+G+ +F LHKF L+++S  +   + + S +++ + + L D+PGG +
Sbjct: 24  WVFSQDIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIME-SKDSDVTRINLSDIPGGPE 82

Query: 77  AFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNHI-YGYWTD 135
            F   AKFCYGV  E+T  NV  L CA+++LQM++ Y + NL  +T++FL+ +     + 
Sbjct: 83  IFEKAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSG 142

Query: 136 TLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPTSIVQSPEDHGDLW 195
            +  LK+CE +LP + +L I  R +  +  KA + ++   P  + P              
Sbjct: 143 AIVVLKSCEILLPISRDLGIVRRCVDVVGAKACNEAM--FPCRTPP-------------- 186

Query: 196 NGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIPXX 255
                        +WW E++C L +  +   +     R +KP  +A +++ Y +K +   
Sbjct: 187 -------------NWWTEELCILDVDFFSDVVSSMKQRGVKPSSLASAIITYTEKSLRDL 233

Query: 256 XXXXXXXXXXXXXXXXXEAD----QRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYX 311
                            E+D    QR+L++ +V LLP++KGL P  FL   LR A+ L  
Sbjct: 234 VRDHSGRGVKYSDPGDNESDERSQQRDLVQSIVSLLPSDKGLFPVNFLCSLLRCAVFLDT 293

Query: 312 XXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHFMIVDHDDVDST 371
                  LEKRI   L+   ++DLLIP+  Y  E L D+D V+R++  F  V+ +     
Sbjct: 294 SLTCKNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDLDSVRRIISAF--VEKEKNVGV 351

Query: 372 SNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLD 431
            N  +  R + +       + +VA+ +D YLAE+A   +L + KF ++A LVP  AR  D
Sbjct: 352 FNGGDFNRGVCS-----VSLQRVAKTVDSYLAEIATYGDLTISKFNAIANLVPKSARKSD 406

Query: 432 DGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFE 491
           D +YRAIDI+LK HP + + E+E++C  M+  KLS +A  HA+QN+RLP+ +V+  L+++
Sbjct: 407 DDLYRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLHASQNKRLPVNIVLHALYYD 466

Query: 492 QLKLRTSVA 500
           QLKLR+ VA
Sbjct: 467 QLKLRSGVA 475


>AT4G31820.1 | Symbols: ENP, NPY1, MAB4 | Phototropic-responsive
           NPH3 family protein | chr4:15390788-15393627 REVERSE
           LENGTH=571
          Length = 571

 Score =  284 bits (726), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 182/506 (35%), Positives = 276/506 (54%), Gaps = 53/506 (10%)

Query: 1   MKLGSKSEMFYLYGE-SWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSS 59
           MKLGSK + F   G+      S L SDV I +G+ +FHLHKFPL+S+S  ++  + + S 
Sbjct: 4   MKLGSKPDTFESDGKFVKYAVSDLDSDVTIHVGEVTFHLHKFPLLSKSNRMQRLVFEASE 63

Query: 60  ENEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLI 119
           E    +  L D+PGG KAF + AKFCYG+ + L   N+  +RCA++YL+M+ED   GNLI
Sbjct: 64  EKTDEITIL-DMPGGYKAFEICAKFCYGMTVTLNAYNITAVRCAAEYLEMTEDADRGNLI 122

Query: 120 IQTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKA-ADPSLVILPI 177
            + E FLN  I+  W D++  L+T   +LP++E+L +  R I S+  K   +P  +    
Sbjct: 123 YKIEVFLNSGIFRSWKDSIIVLQTTRSLLPWSEDLKLVGRCIDSVSAKILVNPETITWSY 182

Query: 178 S-----SGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFM-LGAI 231
           +     SGP  IV+   +  +         +    +DWW EDVC L + ++KR + +   
Sbjct: 183 TFNRKLSGPDKIVEYHREKRE---------ENVIPKDWWVEDVCELEIDMFKRVISVVKS 233

Query: 232 ARHMKPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPN-- 289
           +  M    IA +L YY  + +P                    +  ++L+E +V LLP   
Sbjct: 234 SGRMNNGVIAEALRYYVARWLPESMESLTSEA----------SSNKDLVETVVFLLPKVN 283

Query: 290 -EKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLH 348
                +   FLL+ L+ ++ +         L + +  +L EA ++DLLI          H
Sbjct: 284 RAMSYSSCSFLLKLLKVSILVGADETVREDLVENVSLKLHEASVKDLLI----------H 333

Query: 349 DIDCVQRMLDHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPD 408
           +++ V R++D FM    D+   + +D  +E  L  G      +  V  L+D YLA    +
Sbjct: 334 EVELVHRIVDQFMA---DEKRVSEDDRYKEFVLGNGI-----LLSVGRLIDAYLA---LN 382

Query: 409 VNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLE 468
             L L  F  L+ LVP+ AR + DG+Y+AID ++K HP +T SEK+++C LM+ +KL+ E
Sbjct: 383 SELTLSSFVELSELVPESARPIHDGLYKAIDTFMKEHPELTKSEKKRLCGLMDVRKLTNE 442

Query: 469 ASTHAAQNERLPLRVVVQVLFFEQLK 494
           ASTHAAQNERLPLRVVVQVL+FEQL+
Sbjct: 443 ASTHAAQNERLPLRVVVQVLYFEQLR 468


>AT2G14820.1 | Symbols: NPY2 | Phototropic-responsive NPH3 family
           protein | chr2:6358864-6361300 FORWARD LENGTH=634
          Length = 634

 Score =  281 bits (719), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 179/510 (35%), Positives = 276/510 (54%), Gaps = 33/510 (6%)

Query: 1   MKLGSKSEMFYLYGES-WLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSS 59
           MK+GSK + F   G +    ++ L SD+ +++  + F LHKFPL+S+   L+   K LSS
Sbjct: 4   MKIGSKLDSFKTDGNNVRYVENELASDISVDVEGSRFCLHKFPLLSKCACLQ---KLLSS 60

Query: 60  ENEKSV--LELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGN 117
            ++ ++  +++  +PGG  AF   AKFCYG+ + L+  NVV  RCA++YL M E   +GN
Sbjct: 61  TDKNNIDDIDISGIPGGPTAFETCAKFCYGMTVTLSAYNVVATRCAAEYLGMHETVEKGN 120

Query: 118 LIIQTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILP 176
           LI + + FL+  ++  W D++  L+T +  LP +E+L + S  I ++  KA       + 
Sbjct: 121 LIYKIDVFLSSSLFRSWKDSIIVLQTTKPFLPLSEDLKLVSLCIDAIATKAC------VD 174

Query: 177 ISSGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMK 236
           +S    S   + +   +  NG           DWW ED+C L +  YKR ++    + + 
Sbjct: 175 VSHVEWSYTYNKKKLAEENNGADSIKARDVPHDWWVEDLCELEIDYYKRVIMNIKTKCIL 234

Query: 237 PRRIAG-SLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTP 295
              + G +L  Y  + +                        + +IE +V LLP EK    
Sbjct: 235 GGEVIGEALKAYGYRRLSGFNKGVMEQGDL--------VKHKTIIETLVWLLPAEKNSVS 286

Query: 296 TKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQR 355
             FLL+ L+    +         L +RIG QL+EA + +LLI +   S ETL+D+D VQ+
Sbjct: 287 CGFLLKLLKAVTMVNSGEVVKEQLVRRIGQQLEEASMAELLIKSHQGS-ETLYDVDLVQK 345

Query: 356 MLDHFMIVDHDDVDSTSND-----IEEERRLVAGPQRLSPMAK--VAELMDGYLAEVAPD 408
           ++  FM  D +      +D     ++E R+L   P  LS  +K  VA+++D YL E+A D
Sbjct: 346 IVMEFMRRDKNSEIEVQDDEDGFEVQEVRKL---PGILSEASKLMVAKVIDSYLTEIAKD 402

Query: 409 VNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLE 468
            NL   KF  +A  V    R   D +YRAID++LK HP +T  EK+++C+LM+C+KLS+E
Sbjct: 403 PNLPASKFIDVAESVTSIPRPAHDALYRAIDMFLKEHPGITKGEKKRMCKLMDCRKLSVE 462

Query: 469 ASTHAAQNERLPLRVVVQVLFFEQLKLRTS 498
           A  HA QN+RLPLRVVVQVLFFEQ++   S
Sbjct: 463 ACMHAVQNDRLPLRVVVQVLFFEQVRAAAS 492


>AT5G10250.1 | Symbols: DOT3 | Phototropic-responsive NPH3 family
           protein | chr5:3217028-3219368 REVERSE LENGTH=607
          Length = 607

 Score =  275 bits (704), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 182/581 (31%), Positives = 285/581 (49%), Gaps = 78/581 (13%)

Query: 16  SWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGY-MKDLSSENEKSVLELHDLPGG 74
           SW  +S +P+D+ I++ D +F  HKFPLIS+   +    +K  +SEN    L+L + PGG
Sbjct: 43  SWYVKSQIPTDLSIQVNDITFKAHKFPLISKCGYISSIELKPSTSENGYH-LKLENFPGG 101

Query: 75  AKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNHIY-GYW 133
           A  F  + KFCY + ++L P NV  LRCAS+YL M+E++  GNLI +TE F+  +    W
Sbjct: 102 ADTFETILKFCYNLPLDLNPLNVAPLRCASEYLYMTEEFEAGNLISKTEAFITFVVLASW 161

Query: 134 TDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPTSIVQSPEDHGD 193
            DTL  L++C  + P+AE L I  R    L  KA + + +              PED  D
Sbjct: 162 RDTLTVLRSCTNLSPWAENLQIVRRCCDLLAWKACNDNNI--------------PEDVVD 207

Query: 194 LWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIP 253
                         E   + D+ +L +  + R +    AR  KP+     ++ YA   +P
Sbjct: 208 ------------RNERCLYNDIATLDIDHFMRVITTMKARRAKPQITGKIIMKYADNFLP 255

Query: 254 XXXXXXXXXXXXXXXXXXXE----------------ADQRNLIEEMVELLPNEKGLTPTK 297
                              +                 + +  IE +V +LP + G     
Sbjct: 256 VINDDLEGIKGYGLGKNELQFSVNRGRMEESNSLGCQEHKETIESLVSVLPPQSGAVSCH 315

Query: 298 FLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRML 357
           FLLR L+T++           LEKR+G  L++A++ DLLIPN     +         R+ 
Sbjct: 316 FLLRMLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKNEEQQER-----VRIF 370

Query: 358 DHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQ 417
           + F++              E+++++  P        +++L+D YLAE+A D  L + KFQ
Sbjct: 371 EFFLM-------------HEQQQVLGKPS-------ISKLLDNYLAEIAKDPYLPITKFQ 410

Query: 418 SLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNE 477
            LA ++P+ A    DG+YRAID++LKTHP ++D ++ ++C+ MNC+KLSL+A  HAAQN+
Sbjct: 411 VLAEMLPENAWKCHDGLYRAIDMFLKTHPSLSDHDRRRLCKTMNCEKLSLDACLHAAQND 470

Query: 478 RLPLRVVV----QVLFFEQLKLRTSVAGWFFTSENLENTQNLSGNLALLRNIDGNTPPNP 533
           RLPLR +V    QVLF EQ+K+R  +       E     +N  G      + D       
Sbjct: 471 RLPLRTIVQINTQVLFSEQVKMRMMMQDKLPEKEE----ENSGGREDKRMSRDNEIIKTL 526

Query: 534 VLAFDNMKDRVSELEKECLTMKHELEKMMKSNKGSWNMILR 574
               +N+K ++SEL+ +   ++ E E++    K S N  LR
Sbjct: 527 KEELENVKKKMSELQSDYNELQQEYERLSSKQKSSHNWGLR 567


>AT3G26490.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:9704142-9706161 FORWARD LENGTH=588
          Length = 588

 Score =  269 bits (688), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 180/522 (34%), Positives = 273/522 (52%), Gaps = 46/522 (8%)

Query: 1   MKLGSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSE 60
           M+LG + + FY         S L +D++I++  T + LHKFP++S+   L+  +    +E
Sbjct: 4   MELGFRPDTFYTVESVRSVSSDLLNDLVIQVKSTKYLLHKFPMLSKCLRLKNLVSSQETE 63

Query: 61  N--EKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEG-- 116
              E+ V++L D PG  +AF L AKFCYG+ + L   NVV +RCA++YL M+E+   G  
Sbjct: 64  TSQEQQVIQLVDFPGETEAFELCAKFCYGITITLCAHNVVAVRCAAEYLGMTEEVELGET 123

Query: 117 -NLIIQTENFLNH-IYGYWTDTLKALKTCEEVLP-FAEELHITSRSIHSLV--LKAADPS 171
            NL+ + E FL   ++  W D+   L+T  +VLP ++E+L IT+R I ++   +  +   
Sbjct: 124 ENLVQRLELFLTTCVFKSWRDSYVTLQT-TKVLPLWSEDLGITNRCIEAIANGVTVSPGE 182

Query: 172 LVILPISSGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAI 231
                + +G             L NG   +  E+    WW ED+  L L LY+R M+   
Sbjct: 183 DFSTQLETGLLRNRSRIRRDEILCNGGGGSKAESL--RWWGEDLAELGLDLYRRTMVAIK 240

Query: 232 ARHMK--PRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPN 289
           + H K  PR I  +L  YA K +P                    AD   ++E ++ LLP 
Sbjct: 241 SSHRKISPRLIGNALRIYASKWLPSIQES--------------SADSNLVLESVISLLPE 286

Query: 290 EKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHD 349
           EK   P  FLL+ L+ A  +         L  + G+QLD+A + +LLIP +      L+D
Sbjct: 287 EKSSVPCSFLLQLLKMANVMNVSHSSKMELAIKAGNQLDKATVSELLIP-LSDKSGMLYD 345

Query: 350 IDCVQRMLDHFMI------------VDHDDVDSTSNDIEEERRLVAGPQRLSPMA----- 392
           +D V+ M+  F+              +H    S  N   EE + V G    S        
Sbjct: 346 VDVVKMMVKQFLSHISPEIRPTRTRTEHRRSRSEENINLEEIQEVRGSLSTSSSPPPLLS 405

Query: 393 KVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSE 452
           KVA+L+D YL E+A DVNL + KF  LA  +PD +R   D +Y AID+YL+ H  +   E
Sbjct: 406 KVAKLVDSYLQEIARDVNLTVSKFVELAETIPDTSRICHDDLYNAIDVYLQVHKKIEKCE 465

Query: 453 KEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLK 494
           ++++CR+++C+KLS+EAS  AAQNE LPLRV+VQ+LF EQ +
Sbjct: 466 RKRLCRILDCKKLSVEASKKAAQNELLPLRVIVQILFVEQAR 507


>AT5G67440.2 | Symbols: NPY3 | Phototropic-responsive NPH3 family
           protein | chr5:26912947-26914646 REVERSE LENGTH=542
          Length = 542

 Score =  267 bits (682), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 176/475 (37%), Positives = 264/475 (55%), Gaps = 52/475 (10%)

Query: 38  LHKFPLISRSKVLEGYMKDLSSENEKSVLELH--DLPGGAKAFLLVAKFCYGVKMELTPS 95
           L +FPL+S+S  L+  +   +++ +    E+   D+PGG  AF + AKFCYG+ + L   
Sbjct: 5   LKQFPLLSKSARLQKLIATTTTDEQSDDDEIRIPDIPGGPPAFEICAKFCYGMAVTLNAY 64

Query: 96  NVVILRCASDYLQMSEDYGEGNLIIQTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELH 154
           NVV +RCA++YL+M E    GNL+ + E FLN  +   W D++  L+T     P++E++ 
Sbjct: 65  NVVAVRCAAEYLEMYESIENGNLVYKMEVFLNSSVLRSWKDSIIVLQTTRSFYPWSEDVK 124

Query: 155 ITSRSIHSLVLKAA-DPSLVILPISSGPTSIVQSPEDHGDLWNGISLTSKE----TTGED 209
           +  R + S+ LKAA DP+ V                D    +N   L   E    +   D
Sbjct: 125 LDVRCLESIALKAAMDPARV----------------DWSYTYNRRKLLPPEMNNNSVPRD 168

Query: 210 WWFEDVCSLSLPLYKRFMLGAIARH--MKPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXX 267
           WW ED+  LS+ L+KR ++  I R   + P  I  +L  YA K IP              
Sbjct: 169 WWVEDLAELSIDLFKR-VVSTIRRKGGVLPEVIGEALEVYAAKRIPGFMIQNDDNDDEED 227

Query: 268 XXXXXEADQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQL 327
                  +QR+L+E +V +LP+EK      FL++ L+++++          L +RIG +L
Sbjct: 228 VM-----EQRSLLETLVSMLPSEKQSVSCGFLIKLLKSSVSFECGEEERKELSRRIGEKL 282

Query: 328 DEADLEDLLI--PNIGYSMETLHDIDCVQRMLDHFMIV--DHDDVDSTSNDIEEERRLVA 383
           +EA++ DLLI  P  G   ET++DID V+ ++D F+      D++D  S+DI +      
Sbjct: 283 EEANVGDLLIRAPEGG---ETVYDIDIVETLIDEFVTQTEKRDELD-CSDDIND------ 332

Query: 384 GPQRLSPMAKVAELMDGYLAEVAP-DVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYL 442
                S  A VA+L+DGYLAE++  + NL   KF ++A  V  + R   DG+YRAID++L
Sbjct: 333 -----SSKANVAKLIDGYLAEISRIETNLSTTKFITIAEKVSTFPRQSHDGVYRAIDMFL 387

Query: 443 KTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRT 497
           K HP +T SEK+   +LM+C+KLS EA  HA QNERLPLRVVVQ+LFFEQ++  T
Sbjct: 388 KQHPGITKSEKKSSSKLMDCRKLSPEACAHAVQNERLPLRVVVQILFFEQVRATT 442


>AT5G47800.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:19354171-19356126 FORWARD LENGTH=559
          Length = 559

 Score =  265 bits (676), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 165/496 (33%), Positives = 261/496 (52%), Gaps = 29/496 (5%)

Query: 1   MKLGSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSE 60
           MK+G+K + FY    S +  +  P+D++I I +T++HLH+  L+ +  +L     DL  E
Sbjct: 4   MKIGTKPDTFYTQEASRILITDTPNDLVIRINNTTYHLHRSCLVPKCGLLRRLCTDLE-E 62

Query: 61  NEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLII 120
           ++   +EL+D+PGGA AF L AKFCY + + L+  N+V   CAS +L+MS+   +GNL+ 
Sbjct: 63  SDTVTIELNDIPGGADAFELCAKFCYDITINLSAHNLVNALCASKFLRMSDSVDKGNLLP 122

Query: 121 QTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISS 179
           + E F +  I   W D++  L++  ++  + E L I  + I S+V K      ++ P S 
Sbjct: 123 KLEAFFHSCILQGWKDSIVTLQSTTKLPEWCENLGIVRKCIDSIVEK------ILTPTSE 176

Query: 180 GPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRR 239
              S       H     G +     +   DWW ED+  L L L++  +  A +    P +
Sbjct: 177 VSWS-------HTYTRPGYAKRQHHSVPRDWWTEDISDLDLDLFRCVITAARSTFTLPPQ 229

Query: 240 IAG-SLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTPTKF 298
           + G +L  Y  + +P                   E   R L+  +V ++P +KG     F
Sbjct: 230 LIGEALHVYTCRWLPYFKSNSHSGFSVKENEAALER-HRRLVNTVVNMIPADKGSVSEGF 288

Query: 299 LLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLD 358
           LLR +  A  +         L ++   QL+EA LEDLL+P+   S    +D D V  +L+
Sbjct: 289 LLRLVSIASYVRASLTTKTELIRKSSLQLEEATLEDLLLPSHSSSHLHRYDTDLVATVLE 348

Query: 359 HFMIV--DHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKF 416
            F+++         +SN+           Q L  + KVA+L+D YL  VA DV++ + KF
Sbjct: 349 SFLMLWRRQSSAHLSSNNT----------QLLHSIRKVAKLIDSYLQAVAQDVHMPVSKF 398

Query: 417 QSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQN 476
            SL+  VPD AR   D +Y+AI+I+LK HP ++  EK+++CR ++CQKLS +   HA +N
Sbjct: 399 VSLSEAVPDIARQSHDRLYKAINIFLKVHPEISKEEKKRLCRSLDCQKLSAQVRAHAVKN 458

Query: 477 ERLPLRVVVQVLFFEQ 492
           ER+PLR VVQ LFF+Q
Sbjct: 459 ERMPLRTVVQALFFDQ 474


>AT2G23050.1 | Symbols: NPY4 | Phototropic-responsive NPH3 family
           protein | chr2:9810785-9812468 FORWARD LENGTH=481
          Length = 481

 Score =  263 bits (673), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 174/513 (33%), Positives = 274/513 (53%), Gaps = 69/513 (13%)

Query: 1   MKLGSKSEMFYLYGES-WLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSS 59
           MKLG+K + F   G++     + L +++II IG+  F+LHKFPL+S+S  L+ ++    +
Sbjct: 4   MKLGTKPDSFLSKGDNVRYVTNELETEIIIIIGNVKFYLHKFPLLSKSGFLQKHIATSKN 63

Query: 60  ENEKS----VLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGE 115
           E EK      +++ ++PGG+ AF +  KFCYG+ + L   NVV +RCA+++L+M+E + +
Sbjct: 64  EEEKKNQIDEIDISEIPGGSVAFEICVKFCYGITVTLNAYNVVAVRCAAEFLEMNETFEK 123

Query: 116 GNLIIQTENFLNH-IYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAA-DPSLV 173
            NL+ + + FLN  I+  W D++  L+T +++L    E  +  R + S+   A+ D S V
Sbjct: 124 SNLVYKIDVFLNSTIFRSWKDSIIVLQTTKDLLSDDSE-ELVKRCLGSIASTASIDTSKV 182

Query: 174 ILPIS---SGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGA 230
               +         V+ PED      G+         +DWW ED+C L + LYK+ +   
Sbjct: 183 KWSYTYNRKKKLEKVRKPED------GVP--------KDWWVEDLCELHIDLYKQAIKAI 228

Query: 231 IARHMKPRRIAGSLVY-YAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPN 289
             R   P  + G  ++ YA + I                        R+LI  ++ELLP+
Sbjct: 229 KNRGKVPSNVIGEALHAYAIRRIAGFSKESMQLI------------DRSLINTIIELLPD 276

Query: 290 EKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHD 349
           EKG   + FL +  R ++ L         L+KR+  QL+E  + D+L          ++D
Sbjct: 277 EKGNISSSFLTKLHRASIFLGCEETVKEKLKKRVSEQLEETTVNDIL----------MYD 326

Query: 350 IDCVQRMLDHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDV 409
           +D VQ ++  FM  D                    P+  S ++ VA+L+DGYLAE + D 
Sbjct: 327 LDMVQSLVKEFMNRD--------------------PKTHSKVS-VAKLIDGYLAEKSRDP 365

Query: 410 NLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEA 469
           NL L  F SLA  +  + R   D +YRAID++LK H  ++ SEK+++C LM+C+KLS EA
Sbjct: 366 NLPLQNFLSLAETLSSFPRHSHDVLYRAIDMFLKEHSGISKSEKKRVCGLMDCRKLSAEA 425

Query: 470 STHAAQNERLPLRVVVQVLFFEQLKLRTSVAGW 502
             HA QNERLP+RV+VQVLFFEQ++   S  G+
Sbjct: 426 CEHAVQNERLPMRVIVQVLFFEQIRANGSSTGY 458


>AT2G30520.3 | Symbols: RPT2 | Phototropic-responsive NPH3 family
           protein | chr2:13002920-13005153 REVERSE LENGTH=545
          Length = 545

 Score =  253 bits (647), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 240/448 (53%), Gaps = 41/448 (9%)

Query: 58  SSENEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGN 117
           S +++ + + L D+PGG + F   AKFCYGV  E+T  NV  L CA+++LQM++ Y + N
Sbjct: 16  SKDSDVTRINLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYCDNN 75

Query: 118 LIIQTENFLNHI-YGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILP 176
           L  +T++FL+ +     +  +  LK+CE +LP + +L I  R +  +  KA + ++   P
Sbjct: 76  LAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLGIVRRCVDVVGAKACNEAM--FP 133

Query: 177 ISSGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMK 236
             + P                           +WW E++C L +  +   +     R +K
Sbjct: 134 CRTPP---------------------------NWWTEELCILDVDFFSDVVSSMKQRGVK 166

Query: 237 PRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEAD----QRNLIEEMVELLPNEKG 292
           P  +A +++ Y +K +                    E+D    QR+L++ +V LLP++KG
Sbjct: 167 PSSLASAIITYTEKSLRDLVRDHSGRGVKYSDPGDNESDERSQQRDLVQSIVSLLPSDKG 226

Query: 293 LTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDC 352
           L P  FL   LR A+ L         LEKRI   L+   ++DLLIP+  Y  E L D+D 
Sbjct: 227 LFPVNFLCSLLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDLDS 286

Query: 353 VQRMLDHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLK 412
           V+R++  F  V+ +      N  +  R + +       + +VA+ +D YLAE+A   +L 
Sbjct: 287 VRRIISAF--VEKEKNVGVFNGGDFNRGVCS-----VSLQRVAKTVDSYLAEIATYGDLT 339

Query: 413 LPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTH 472
           + KF ++A LVP  AR  DD +YRAIDI+LK HP + + E+E++C  M+  KLS +A  H
Sbjct: 340 ISKFNAIANLVPKSARKSDDDLYRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLH 399

Query: 473 AAQNERLPLRVVVQVLFFEQLKLRTSVA 500
           A+QN+RLP+ +V+  L+++QLKLR+ VA
Sbjct: 400 ASQNKRLPVNIVLHALYYDQLKLRSGVA 427


>AT2G30520.2 | Symbols: RPT2 | Phototropic-responsive NPH3 family
           protein | chr2:13002920-13005153 REVERSE LENGTH=545
          Length = 545

 Score =  253 bits (647), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 240/448 (53%), Gaps = 41/448 (9%)

Query: 58  SSENEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGN 117
           S +++ + + L D+PGG + F   AKFCYGV  E+T  NV  L CA+++LQM++ Y + N
Sbjct: 16  SKDSDVTRINLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYCDNN 75

Query: 118 LIIQTENFLNHI-YGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILP 176
           L  +T++FL+ +     +  +  LK+CE +LP + +L I  R +  +  KA + ++   P
Sbjct: 76  LAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLGIVRRCVDVVGAKACNEAM--FP 133

Query: 177 ISSGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMK 236
             + P                           +WW E++C L +  +   +     R +K
Sbjct: 134 CRTPP---------------------------NWWTEELCILDVDFFSDVVSSMKQRGVK 166

Query: 237 PRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEAD----QRNLIEEMVELLPNEKG 292
           P  +A +++ Y +K +                    E+D    QR+L++ +V LLP++KG
Sbjct: 167 PSSLASAIITYTEKSLRDLVRDHSGRGVKYSDPGDNESDERSQQRDLVQSIVSLLPSDKG 226

Query: 293 LTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDC 352
           L P  FL   LR A+ L         LEKRI   L+   ++DLLIP+  Y  E L D+D 
Sbjct: 227 LFPVNFLCSLLRCAVFLDTSLTCKNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDLDS 286

Query: 353 VQRMLDHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLK 412
           V+R++  F  V+ +      N  +  R + +       + +VA+ +D YLAE+A   +L 
Sbjct: 287 VRRIISAF--VEKEKNVGVFNGGDFNRGVCS-----VSLQRVAKTVDSYLAEIATYGDLT 339

Query: 413 LPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTH 472
           + KF ++A LVP  AR  DD +YRAIDI+LK HP + + E+E++C  M+  KLS +A  H
Sbjct: 340 ISKFNAIANLVPKSARKSDDDLYRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLH 399

Query: 473 AAQNERLPLRVVVQVLFFEQLKLRTSVA 500
           A+QN+RLP+ +V+  L+++QLKLR+ VA
Sbjct: 400 ASQNKRLPVNIVLHALYYDQLKLRSGVA 427


>AT3G49970.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18527216-18529066 REVERSE LENGTH=526
          Length = 526

 Score =  235 bits (599), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 146/457 (31%), Positives = 235/457 (51%), Gaps = 69/457 (15%)

Query: 35  SFHLHKFPLISRSKVLEGYMKDLSSE--NEKSVLELHDLPGGAKAFLLVAKFCYGVKMEL 92
           SF LHKFPL+S+     G++K L+SE  N+ +++ + D PGGA+ F LV KFCY +  E+
Sbjct: 6   SFLLHKFPLVSKC----GFIKKLASESSNDSNIIRIPDFPGGAEGFELVIKFCYDISFEI 61

Query: 93  TPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNH-IYGYWTDTLKALKTCEEVLPFAE 151
              N+ +L CA++YL+M+E++   NL+   E +LN  I    + ++K L+  +++LP AE
Sbjct: 62  NTENIAMLLCAAEYLEMTEEHSVENLVETIEVYLNEVILKSLSKSVKVLQKSQDLLPIAE 121

Query: 152 ELHITSRSIHSLVLKAADPSLVILPISSGPTSIVQSPEDHGDLWNGISLTSKETTGEDWW 211
            + +  R I S+                   +I Q  + + D+              DWW
Sbjct: 122 RVRLVDRCIDSIAY-----------------AICQESQSNEDIV-------------DWW 151

Query: 212 FEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIPXXXXXXXXXX-------- 263
            +D+  L + +++R ++  IAR  K   +   L  YA+K +                   
Sbjct: 152 ADDLAVLKIDMFRRVLVAMIARGFKRYSLGPVLKLYAEKALRGLVRFLNFLTEQCDIFGK 211

Query: 264 XXXXXXXXXEADQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRI 323
                    E ++R ++E +V LLP E+      FL   LR A+ L         LEKR+
Sbjct: 212 EAKKMEAEQEHEKRLILETIVSLLPRERNSVSVSFLSILLRAAIYLETTVACRLDLEKRM 271

Query: 324 GSQLDEADLEDLLIPNIGYSME-TLHDIDCVQRMLDHFMIVDHDDVDSTSNDIEEERRLV 382
           G QL +A ++DLLIP   ++ + T+ D+D VQR+L +++     +V+  S D   +    
Sbjct: 272 GLQLRQAVIDDLLIPYYSFNGDNTMLDVDTVQRILMNYL---EFEVEGNSADFASD---- 324

Query: 383 AGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYL 442
                      + ELM+ YLAE+A D N+   KF   A  +P  +R     +YRAIDI+L
Sbjct: 325 -----------IGELMETYLAEIASDRNINFAKFIGFAECIPKQSR-----MYRAIDIFL 368

Query: 443 KTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERL 479
           KTHP +++ EK+++C LM+C+KLS +   HAAQN+R 
Sbjct: 369 KTHPNISEVEKKKVCSLMDCKKLSRDVYAHAAQNDRF 405


>AT2G47860.2 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr2:19600465-19602088 FORWARD LENGTH=517
          Length = 517

 Score =  219 bits (558), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 164/494 (33%), Positives = 260/494 (52%), Gaps = 50/494 (10%)

Query: 109 MSEDYGEGNLIIQTENFL-NHIYGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKA 167
           M+ED  E NL  +TE +L + I+   ++++  L +CE +LP AEE+++  R ++++ + A
Sbjct: 1   MTEDLSEKNLEARTEAYLKDSIFNDISNSITVLHSCERLLPVAEEINLVGRLVNAIAVNA 60

Query: 168 ADPSLVILPISSGPTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFM 227
               L     +SG   + QS         G+  T+K     DWW   +  L L  ++R +
Sbjct: 61  CKEQL-----ASGLLKLDQS------FSCGVPETAKPC---DWWGRSLPILKLDFFQRVL 106

Query: 228 LGAIARHMKPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELL 287
               ++ +    I+  L+ YA+K +                    +  QR ++E +V LL
Sbjct: 107 SAMKSKGLNHDIISDILMSYARKSL-----QIIREPNLVKSDSDLQRKQRIVLEAVVGLL 161

Query: 288 PNE--KGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIP-NIGYSM 344
           P +  K   P  FL   L+TA+           LE+RI   LD+A LED+LIP NIG   
Sbjct: 162 PTQANKSSIPISFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQAILEDILIPANIG--- 218

Query: 345 ETLHDIDCVQRMLDHFMIVDHDDVDSTSNDIEEERRLV---------AGPQRLSPMAKVA 395
             ++D D VQR+   F+ +D  +     +D E+              A   + S + KV+
Sbjct: 219 -AMYDTDSVQRIFSMFLNLDECEYRDDDDDEEDAVDESEMAMYDFEGAESPKQSSIFKVS 277

Query: 396 ELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQ 455
           +LMD YLAEVA D +L   KF +LA L+PD+AR + DG+YRA+DI+LK HP M DSE+ +
Sbjct: 278 KLMDSYLAEVALDSSLPPSKFIALAELLPDHARVVCDGLYRAVDIFLKVHPHMKDSERYR 337

Query: 456 ICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVA----------GWFFT 505
           +C+ ++C+KLS +AS+HAAQNERLP+++ VQVLF+EQ +L+ ++             FF 
Sbjct: 338 LCKTVSCKKLSQDASSHAAQNERLPVQIAVQVLFYEQTRLKNAMTSGGGTGGSNQSQFFL 397

Query: 506 SENLENTQNLSGNLALLRNIDGNTPPNPVLAFD--NMKDRVSELEKECLTMKHELEKMMK 563
             N   +   SG ++   N       N  L  +   M+ R+++LEK+ ++MK +  K  +
Sbjct: 398 FPNRSGSGMASGAISPRDNYASVRRENRELRLEVARMRMRLTDLEKDHVSMKRDFVK-PQ 456

Query: 564 SNKGSWNMILRKLS 577
           S +  + M LRKLS
Sbjct: 457 SRRRRYGM-LRKLS 469


>AT5G64330.1 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsive
           NPH3 family protein | chr5:25727568-25730225 FORWARD
           LENGTH=746
          Length = 746

 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/240 (44%), Positives = 150/240 (62%), Gaps = 14/240 (5%)

Query: 275 DQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLED 334
           DQR ++E ++ ++P +K      FLLR LR A  L         LEKR+G Q ++A L+D
Sbjct: 372 DQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQD 431

Query: 335 LLIPNIGYSMETLHDIDCVQRMLDHFMIVDH-DDVDSTSNDIEEERRLVAGPQRLSPMA- 392
           LLIP      ET++D+D VQR+L+HF++ +  +    +       + + A   R +    
Sbjct: 432 LLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNNNNG 491

Query: 393 ------------KVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDI 440
                       +VA L+D YL EVA D NL L KFQ LA  +P+ ART DDG+YRAID 
Sbjct: 492 GGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDS 551

Query: 441 YLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVA 500
           YLK HP +++ E++++CR+M+CQKLS++A  HAAQNERLPLRVVVQVLF EQ+K+  ++A
Sbjct: 552 YLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVVQVLFSEQVKISNALA 611



 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 153/266 (57%), Gaps = 20/266 (7%)

Query: 4   GSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDL---SSE 60
           G K++ F L G+SW   + +PSD++++IGD +FHLHK+PL+SRS    G M  L   S +
Sbjct: 33  GVKTDGFELRGQSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRS----GKMNRLIYESRD 88

Query: 61  NEKSVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLII 120
            + ++L L DLPGG +AF L +KFCYGV ++LT +N+  LRCA++YL+M+ED  EGNLI 
Sbjct: 89  PDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIF 148

Query: 121 QTENFLNHIY-GYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISS 179
           +TE FL+++    W D++  LK+CE++ P+AE L I  R   S+  KA      I    +
Sbjct: 149 KTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYT 208

Query: 180 G--PTSIVQSPEDHGDLWNGISLT------SKETTGE----DWWFEDVCSLSLPLYKRFM 227
           G  P+    +       WN    +      S+ T  +    DWWFEDV  L +  + R +
Sbjct: 209 GKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVI 268

Query: 228 LGAIARHMKPRRIAGSLVYYAKKHIP 253
                + M+   +   +++YA K +P
Sbjct: 269 TAIKVKGMRFELLGAVIMHYAGKWLP 294


>AT3G19850.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:6898383-6901157 REVERSE LENGTH=554
          Length = 554

 Score =  193 bits (491), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 223/452 (49%), Gaps = 53/452 (11%)

Query: 65  VLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTEN 124
           ++E+ D PGG+  F LV +FCYG  + +  SNV IL C+S +L+M+E     NL+++TE 
Sbjct: 51  IIEVEDFPGGSDGFDLVLRFCYGGGISIDVSNVSILHCSSVFLEMTEKLCSSNLLLRTEK 110

Query: 125 FLNHIYGY-WTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKA---ADPSLVILPISSG 180
           FL  ++ + W D +  LK+CE+V   A+   +  + +  ++ K    +D S V    S  
Sbjct: 111 FLEGMFYWSWNDIVLCLKSCEQVFLHADSYGLVDKLVFGVLAKIPQNSDVSHVFSSSSPS 170

Query: 181 ------------PTSIVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFM- 227
                        T++++S  D        S      T  +WWF+D+  L   + ++ + 
Sbjct: 171 SSASASASSQSPETAMIRSYSDKRSTSRSFSCR----TSNEWWFDDMSILGPKIIEKLIN 226

Query: 228 -LGAIARHMKPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVE- 285
            LGA  ++     +   L++Y K  +P                   + +   L +  V+ 
Sbjct: 227 TLGAHDKNNDSLVLTKFLLHYLKTKVPNKSTN--------------KLEYSGLADTAVQG 272

Query: 286 LLPNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSME 345
           ++   K     + +   LR              LE+ IG  LD+A L+DLLIP  G   +
Sbjct: 273 VVFAAKTAFSCRKMFWVLRVLSGFSISKESRIGLERVIGEMLDQATLDDLLIPAGGKGEK 332

Query: 346 TLHDIDCVQRMLDHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEV 405
            ++D+D V R+L  F+ +          + EE      G Q L  M ++ +L+D YL E+
Sbjct: 333 GVYDVDLVIRLLKVFVRI---------GNTEE------GDQNLR-MRRIGKLIDKYLREI 376

Query: 406 APDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKL 465
           +PD NLK+ KF  +A  +PD AR   DG+YRAI+IYL++HP ++  ++ ++CR +N +KL
Sbjct: 377 SPDQNLKVSKFLEVAESLPDSARDWFDGLYRAINIYLESHPKLSSEDRTKLCRCLNYKKL 436

Query: 466 SLEASTHAAQNERLPLRVVVQVLFFEQLKLRT 497
           +L+     A+N ++P  + VQ L  +QL   T
Sbjct: 437 TLDTCKQLAKNPKIPPNIAVQALKSQQLSNET 468


>AT1G52770.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:19656009-19657546 FORWARD LENGTH=454
          Length = 454

 Score =  189 bits (480), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 164/294 (55%), Gaps = 26/294 (8%)

Query: 211 WFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIP---------XXXXXXXX 261
           WF+D C L +  + + + G  ++ ++P  I   +V+YA + +P                 
Sbjct: 28  WFDDGCILGIDYFVKTIAGIKSKGVRPDLIGSIIVHYASQWLPDLSDIVLNSDDQQPQPQ 87

Query: 262 XXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEK 321
                         +R+ +E ++ ++P E+   P  FLLR LRTA  +         LE 
Sbjct: 88  QQSESFSVTAFVMKKRSFVETLIGIIPPERDSVPCDFLLRLLRTANMVGADANYKAELEA 147

Query: 322 RIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHFMIVDHDDVDSTSNDIEEERRL 381
           RI  QLD+A L++L+IP+  ++  TL D++ + R++  F  +D++ V S ++ I      
Sbjct: 148 RISWQLDQASLKELMIPSFSHTCGTLLDVELMTRLVKKFAGLDNEGVKSGASLI------ 201

Query: 382 VAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDIY 441
                      KVA+L+D YLAE A D +L L +F SL   +P++AR  +DG+YRAID Y
Sbjct: 202 -----------KVAKLVDSYLAEAALDGDLTLSEFISLVEALPNHARVTEDGLYRAIDTY 250

Query: 442 LKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKL 495
           LK HP +T  E++++C L++  KLS+EAS HAAQN+RLP+R ++QVLF EQ KL
Sbjct: 251 LKAHPNVTKQERKRLCGLIDSNKLSMEASLHAAQNDRLPVRTIIQVLFSEQAKL 304


>AT3G15570.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:5270267-5271700 REVERSE LENGTH=452
          Length = 452

 Score =  188 bits (477), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 190/380 (50%), Gaps = 40/380 (10%)

Query: 211 WFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXX 270
           +F++ C   +  + + + G  ++ ++P  I   + +YA K +P                 
Sbjct: 29  YFDESCIQDMNYFVKTITGIKSKGIRPDLIGSIIAHYASKWLPDLSGNVSAIISSTSLES 88

Query: 271 XXEAD-------------QRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXXXXXX 317
               +             +R  +E ++ +LP EK   P  FLLR LRTA  +        
Sbjct: 89  KNNHNDTQPESVTASVMKKRFFVETLIGILPPEKDSVPCNFLLRLLRTAKMVGANPNYLT 148

Query: 318 XLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHFMIVDHDDVDSTSNDIEE 377
            LE R+  QLD+A L++L+IP+  Y+  TL DI+ V R+++ F  +D + V + +     
Sbjct: 149 ELETRVSWQLDQASLKELMIPSFSYTSGTLLDIELVTRLVNKFSGLDSEGVKTAA----- 203

Query: 378 ERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRA 437
                        + KVA+L+D YLAE A D  L LP+F SL   +P +ART +DG+YRA
Sbjct: 204 ------------ALVKVAKLVDSYLAEAAVDGGLALPEFISLITALPSHARTTEDGLYRA 251

Query: 438 IDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRT 497
           ID YLK HP +   E++++CRL++ +KLS EA+ HAAQN+RLP+R ++ VLF EQ KL  
Sbjct: 252 IDTYLKAHPQVLKQERKELCRLIDSRKLSPEAALHAAQNDRLPVRAIIGVLFTEQTKLSR 311

Query: 498 SV-------AGWFFTSENLENTQNLSGNLALLRNIDGNTPPNPVLAFDNMKDRVSELEKE 550
            +       +    +  N   +  L G  A  R +              +++ V  L+ +
Sbjct: 312 HIDCNSSSISSTTRSPTNASGSHYLEGGSA-ARCLSKREMNVQQAEIRRLREDVVRLQSQ 370

Query: 551 CLTMKHELEKMM--KSNKGS 568
           C  M  +LE++M  KS+ GS
Sbjct: 371 CGAMHFQLERLMEKKSSGGS 390


>AT1G50280.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr1:18623857-18626292 REVERSE LENGTH=525
          Length = 525

 Score =  182 bits (461), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 205/433 (47%), Gaps = 31/433 (7%)

Query: 65  VLELHDLPGGAKAFLLVAKFCY-GVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTE 123
            +E++D PGG   F LV++FCY   ++ +  SNV  L C S +L MSE +   NL +QTE
Sbjct: 50  TIEINDFPGGPDGFELVSRFCYHNGEILIDVSNVSTLYCCSVFLGMSEKFCFSNLFLQTE 109

Query: 124 NFLNHI-YGYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPT 182
            FL  + YG W+D +  LK CE+V   A+   +  + I + + K +  S      S    
Sbjct: 110 KFLEEVFYGSWSDIVSCLKNCEQVFFQADSYGLVDKLIFAALNKISQNSDDFSSSSLSSF 169

Query: 183 SIVQSPE--DHGDLWNGISLTSKETTGE--DWWFEDVCSLS--LPLYKRFMLGAIARHMK 236
           +   SPE   +    +G  ++     G   +WWFED+ +LS  + L    ++GA   ++K
Sbjct: 170 ASSLSPEMAKNTSESDGRYISRSVACGRSNEWWFEDMTNLSPKIILKLVMIIGAYKTNIK 229

Query: 237 PRRIAGSLVYYAKKHIPXXXXXXXXXXXXXXXXX-XXEADQRNLIEEMVELLPNEKGLTP 295
              +   L++Y K  +                     +   R +I          K    
Sbjct: 230 SLVLTRFLLHYLKTKLQTKSRTTTELMRNKLEYSDLADTAVRGVISAGTRTFSCRK---- 285

Query: 296 TKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQR 355
              L   LR   +          LE  IG  L++A L+DLLI   G      +++D V R
Sbjct: 286 ---LFWILRVLSSFSLSRESRIGLETLIGEMLEQATLDDLLISARGSRESGFYNVDLVIR 342

Query: 356 MLDHFMIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPK 415
           +L  F+               + R       R   M ++ +L+D YL E++PD NLK+PK
Sbjct: 343 LLKVFV---------------KNREEEEEESRERNMKEIGKLIDKYLREISPDQNLKVPK 387

Query: 416 FQSLAALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQ 475
           F  +A  +PD AR   DG+YRAIDIYL++HP +T  ++ +ICR +N +KL++E     A+
Sbjct: 388 FLGVAESLPDSARDCFDGVYRAIDIYLQSHPNLTPQDRTEICRCLNYKKLTMETCKQLAR 447

Query: 476 NERLPLRVVVQVL 488
           N ++P  + ++ L
Sbjct: 448 NPKIPPEIAIEAL 460


>AT5G17580.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:5795302-5797031 FORWARD LENGTH=548
          Length = 548

 Score =  180 bits (457), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 234/484 (48%), Gaps = 50/484 (10%)

Query: 25  SDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKSVLELHDLPGGAKAFLLVAKF 84
           SD+ I +    FHL K  L  RS  +   ++   +E ++  L L DL    + F LVA+F
Sbjct: 7   SDLHINVKGVPFHLCKEMLAKRSSKVSSLLE--RNEIDELRLILRDLEVDPETFELVARF 64

Query: 85  CYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNH-IYGYWTDTLKALKTC 143
           C G + + T   +V + C + YL M+E+    NL+ +   FL H ++  W++T+ AL++ 
Sbjct: 65  CNGSEFKFTSDTIVSVLCIAYYLGMNEEQSSNNLLGKASEFLEHRVFPSWSETINALRSG 124

Query: 144 EEVLPFAEELHITSRSIHSLVLKAA-DPSLVILPISSGPTSIVQSPEDHGDLWNGISLTS 202
           ++      ++ +      SL+ KA+ DP L+   I +   +    P     L+       
Sbjct: 125 DKSFDKLADVGLVDVFFDSLIEKASYDPRLLGELIKNRAETDDYRPNPRRRLFVI----- 179

Query: 203 KETTGEDWWFEDVCSLSLPLYKRFMLGAI-ARHMKPRRIAGSLVYYAKKHIPXXXXXXXX 261
                 DW  ED+ ++ L LY+ FM+ AI +R +    I  S+  YAKK +         
Sbjct: 180 ------DWKSEDLITIPLRLYEPFMIRAIKSRSIPVEYIVLSVCKYAKKWV--------- 224

Query: 262 XXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEK 321
                         +R  IE +  LLP ++GL   + L  SL+ ++ L            
Sbjct: 225 ----FDTEESLSGQKREAIEVVERLLPYQRGLISCELLFESLKHSIWLEASSECQNGFMI 280

Query: 322 RIGSQLDEADLEDLLIPNIGYS--METLHDIDCVQRMLDHFMIVDHDDVDSTSNDIEEER 379
           RI  QLD A   DL I + GY    E   +I+ V+ ++  F     ++   T        
Sbjct: 281 RICKQLDMAKSTDLKILSRGYGEKAEGFENIELVKTVVKSFYTYYANEDSET-------- 332

Query: 380 RLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYAR---TLDDGIYR 436
                   +S   KVA+L + +L   A + +LKL  F  LA +    ++   +  DGIYR
Sbjct: 333 --------VSHFVKVAKLSEEFLFLAASEASLKLEAFVELAEMTVAVSQGILSYSDGIYR 384

Query: 437 AIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLR 496
           AID++L++H ++T+SEK ++C+++ C KLS E    AA+N++LPLR+VV VL   QL++R
Sbjct: 385 AIDVFLESHRYLTESEKMEVCKVLECGKLSQEGFERAAKNQKLPLRIVVNVLCVSQLQIR 444

Query: 497 TSVA 500
            +VA
Sbjct: 445 DTVA 448


>AT5G48130.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr5:19516291-19518450 FORWARD LENGTH=625
          Length = 625

 Score =  177 bits (448), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 231/493 (46%), Gaps = 71/493 (14%)

Query: 16  SWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEKSVLEL-HDLPGG 74
           SW  ++GLP+ V + + + SF+LHK  L ++S    GY K+   E++ S +E+  + PGG
Sbjct: 32  SWSKETGLPASVHVRVCNKSFNLHKSLLCAKS----GYFKE--REDQLSEIEIPQEFPGG 85

Query: 75  AKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNHIY-GYW 133
           A+ F  +  F YG    + P N+  LRCA+ +L+M+E +  GNL  + + +LN +    W
Sbjct: 86  AETFEKIMLFIYGCPTLIHPFNIAGLRCAAQFLEMTEQHSTGNLCERFDLYLNQVVLQNW 145

Query: 134 TDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAA----DPS------LVILPISSGPTS 183
            DTL  LK C++++P++E+L I SR I SL   A     DP       +++L        
Sbjct: 146 DDTLVVLKKCQDLVPWSEDLLIVSRCIESLAFTACMEILDPERRREKPVIMLE------G 199

Query: 184 IVQSPEDHGDLWNGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARH-MKPRRIAG 242
           +V  P ++ ++        +    +D W +D+  L    +K+ ++G++ R  MK R ++ 
Sbjct: 200 MVNQPWEYTNI--------ERIINQDTWIKDLTDLPFEFFKK-IIGSLRRQGMKERYVSP 250

Query: 243 SLVYYAKKHIPXXXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKG--LTPTKFLL 300
            +  YA K +                    + +   L   +  LL  +K     P  F  
Sbjct: 251 LVALYASKSV----------------IPEGQTNTDILQRALDLLLTRDKAYRFVPVGFYF 294

Query: 301 RSLRTAMALYXXXXXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHF 360
                 +A          L+ +I S L  A  E+ + P  G        +   Q +L   
Sbjct: 295 ----ACLAHNLKHDTVLKLQDQIVSLLHTAQPENFIYPKAGN-----RQVAFSQELL--- 342

Query: 361 MIVDHDDVDSTSNDIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLA 420
                + + S     E ER L +     S   +V +L D +L+ +  D  +K  +F  L 
Sbjct: 343 ---TMESLFSVYVSTESERHLTSS----SSNVRVGKLWDIFLSRLPYDQEMKTTRFIELI 395

Query: 421 ALVPDYARTLDDGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLP 480
             VP   R   D +Y A++ +L+ H  ++  EK  IC  +NCQKLS EAS    +NE++P
Sbjct: 396 ETVPMSFRESHDQLYLAVNAFLQVHTNISQEEKGSICSYLNCQKLSQEASLELVKNEKMP 455

Query: 481 LRVVVQVLFFEQL 493
           LR+VVQ LF +QL
Sbjct: 456 LRLVVQALFIQQL 468


>AT5G64330.2 | Symbols: NPH3, RPT3, JK218 | Phototropic-responsive
           NPH3 family protein | chr5:25727568-25729510 FORWARD
           LENGTH=558
          Length = 558

 Score =  176 bits (445), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 153/263 (58%), Gaps = 14/263 (5%)

Query: 4   GSKSEMFYLYGESWLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMKDLSSENEK 63
           G K++ F L G+SW   + +PSD++++IGD +FHLHK+PL+SRS  +   + + S + + 
Sbjct: 33  GVKTDGFELRGQSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYE-SRDPDP 91

Query: 64  SVLELHDLPGGAKAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTE 123
           ++L L DLPGG +AF L +KFCYGV ++LT +N+  LRCA++YL+M+ED  EGNLI +TE
Sbjct: 92  TILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTE 151

Query: 124 NFLNHIY-GYWTDTLKALKTCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSG-- 180
            FL+++    W D++  LK+CE++ P+AE L I  R   S+  KA      I    +G  
Sbjct: 152 AFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYTGKA 211

Query: 181 PTSIVQSPEDHGDLWNGISLT------SKETTGE----DWWFEDVCSLSLPLYKRFMLGA 230
           P+    +       WN    +      S+ T  +    DWWFEDV  L +  + R +   
Sbjct: 212 PSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAI 271

Query: 231 IARHMKPRRIAGSLVYYAKKHIP 253
             + M+   +   +++YA K +P
Sbjct: 272 KVKGMRFELLGAVIMHYAGKWLP 294



 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 102/185 (55%), Gaps = 14/185 (7%)

Query: 275 DQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXXXXXXXLEKRIGSQLDEADLED 334
           DQR ++E ++ ++P +K      FLLR LR A  L         LEKR+G Q ++A L+D
Sbjct: 372 DQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQD 431

Query: 335 LLIPNIGYSMETLHDIDCVQRMLDHFMIVDH-DDVDSTSNDIEEERRLVAGPQRLSPMA- 392
           LLIP      ET++D+D VQR+L+HF++ +  +    +       + + A   R +    
Sbjct: 432 LLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNNNNG 491

Query: 393 ------------KVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDGIYRAIDI 440
                       +VA L+D YL EVA D NL L KFQ LA  +P+ ART DDG+YRAID 
Sbjct: 492 GGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDS 551

Query: 441 YLKTH 445
           YLK +
Sbjct: 552 YLKVY 556


>AT3G22104.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:7789814-7792179 FORWARD LENGTH=506
          Length = 506

 Score =  170 bits (431), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 252/546 (46%), Gaps = 78/546 (14%)

Query: 25  SDVIIEI-GDTSFHLHKFPLISRSKVLEGYMKDLSSENEKSVLELHDLPGGAKAFLLVAK 83
           SD+ ++I G+ +  L+K  + + S  L   +   +S +    +  +D PGGA++F  V++
Sbjct: 6   SDLEVDINGEQTIFLNKQIICAYSGTLRKLLGKSTSSSGNLKVIFNDFPGGAESFEFVSR 65

Query: 84  FCYG-VKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNHI-YGYWTDTLKALK 141
           FCY   ++ + PSNVV L CA+ ++++++      ++ QTE  +  I Y  W + L  LK
Sbjct: 66  FCYNDGRVAVMPSNVVFLHCAAKFMEVTK------VLEQTEKCMEEIRYWAWPEVLLCLK 119

Query: 142 TCEEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPTSIVQSPEDHGDLWNGISLT 201
            C+EV    E   + ++ + +LV K      + L I   P+S   +      L+   S  
Sbjct: 120 QCQEVETSPEVDSLAAKLMDALVEK------LCLTIEMSPSSAGSACSPDSSLFR-FSCD 172

Query: 202 SKETTGED-------WWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIPX 254
           SK T           WWF++V  LS  L + F+   + R      I+  L YY K     
Sbjct: 173 SKSTESFKNCSVRLTWWFDEVLVLSSGLVEMFLKLMVLRKFDNLIISRFLFYYQKVKF-- 230

Query: 255 XXXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPN-EKGLTPTKFLLRSLRTAMALYXXX 313
                               ++R ++E +++ L   ++   P K L   LR A+ L    
Sbjct: 231 --------------CSASSHEKRKILETIIDTLCVLDRSCVPCKSLFAVLRLALGLNINK 276

Query: 314 XXXXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHFMIVDHDDVDSTSN 373
                LE  IG QLD+A L++LL+P+   S   L+ ++ V R    F+            
Sbjct: 277 SCMNKLEVMIGHQLDQATLDNLLVPSPSKSSH-LYYVNLVLRFTKAFL------------ 323

Query: 374 DIEEERRLVAGPQRLSPMAKVAELMDGYLAEVAPDVNLKLPKFQSLAALVPDYARTLDDG 433
                     G +    + KV+ L+D Y+AEVAPD  LK  KF SL  LVPD AR   + 
Sbjct: 324 ---------DGARSGLQLKKVSSLIDQYIAEVAPDPCLKPSKFLSLITLVPDSARESHED 374

Query: 434 IYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQL 493
           IYRAID+YL+ H   TD EK  + R ++ +KLS E+  H ++N++      ++ L  EQ 
Sbjct: 375 IYRAIDMYLEAHTGTTDGEKLNLIRTLSYEKLSGESRAHISRNQKFQ---AIETL-DEQQ 430

Query: 494 KLRTSVAGWFFTSENLENTQNLSGNLALLRNIDGNTPPNPVLAFDNMKDRVSELEKECLT 553
           + +            +E  +    N  L  +I+G            ++ RV ELE+ CL 
Sbjct: 431 QQQQQQQQQKQLILRMEKVETSGENEKLKEHIEG------------IQWRVMELERACLK 478

Query: 554 MKHELE 559
           M++++E
Sbjct: 479 MQNQME 484


>AT3G03510.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:836340-837707 FORWARD LENGTH=455
          Length = 455

 Score =  162 bits (410), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 209/431 (48%), Gaps = 79/431 (18%)

Query: 78  FLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEGNLIIQTENFLNH-IYGYWTDT 136
           F LV +FCYG K+EL+  N+V + C + YL+MS+D+   NL+ +   FL   +   W++T
Sbjct: 8   FHLVTRFCYGYKIELSADNIVSVLCIAYYLEMSDDHSSNNLLNKAVTFLEQRVLMSWSET 67

Query: 137 LKALKTC-EEVLPFAEELHITSRSIHSLVLKAADPSLVILPISSGPTSIVQSPEDHGDLW 195
           +KAL  C +++L     + +    + SL+ KA + + ++                     
Sbjct: 68  VKALCICSDKILDKLANVGLIEVFLDSLIEKALNDTRLL--------------------- 106

Query: 196 NGISLTSKETTGEDWWFEDVCSLSLPLYKRFMLGAIARHMKPRRIAGSLVYYAKKHIPXX 255
                            +D+ +L L LY+  +L     ++    +  S+  YA + +   
Sbjct: 107 -----------------QDLITLPLRLYEPLILEVSKHNVSLENLVASVCNYANRWV--- 146

Query: 256 XXXXXXXXXXXXXXXXXEADQRNLIEEMVELLPNEKGLTPTKFLLRSLRTAMALYXXXXX 315
                              ++R  IE +  LLP+++G   + FL +SL+ ++ L      
Sbjct: 147 -------FEKDSGDGSVSRNKREGIEAVERLLPHQRGTISSGFLFKSLKESIFLGACSDC 199

Query: 316 XXXLEKRIGSQLDEADLEDLLIPNIGYSMETLHDIDCVQRMLDHFMIVDHDDVDSTSNDI 375
               E RI +QLD A  +DL I  +  + +  +DI+ ++ +L  F           SND 
Sbjct: 200 RKGFEVRISNQLDMARAKDLQI--LSPTEDGSYDIELLKTILKSFY----------SND- 246

Query: 376 EEERRLVAGPQRLSPMAKVAELMDGYLAEVAP-DVNLKLPKFQSLAALVPDYARTLD--- 431
                  + P  LS    VA +++ +L E A  D  L++  F+ LA +    A + D   
Sbjct: 247 -------SVPD-LSRFVSVARMLEEFLLEAAASDAGLRVGTFKELAEIA--VAASCDVLS 296

Query: 432 --DGIYRAIDIYLKTHPWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLF 489
             DGIYRAID+YL+ H  + +SEK + CR ++C+KLS EA  HA++NE+LPLR+V+QVLF
Sbjct: 297 YSDGIYRAIDVYLERHRDLIESEKMEACRFLHCKKLSPEACEHASKNEKLPLRIVMQVLF 356

Query: 490 FEQLKLRTSVA 500
             Q+++R  VA
Sbjct: 357 VSQMQIRDKVA 367


>AT3G49900.2 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18500635-18502614 REVERSE LENGTH=520
          Length = 520

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 13/141 (9%)

Query: 17  WLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMK-DLSSENEKSVLELHDLPGGA 75
           W   +    DV + +G T FHLHK PL S+S    GY+K  L+  NE ++    ++   A
Sbjct: 59  WSLANNSKPDVFVNVGGTRFHLHKDPL-SKS----GYLKRHLTGVNELTLSPPLNIT--A 111

Query: 76  KAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEG----NLIIQTENFLNHIYG 131
           + F LVA FCYG  +ELTPSNVV LR A + L ++E    G    +L   TE++L  +  
Sbjct: 112 ETFSLVAGFCYGAHIELTPSNVVSLRIAVEVLLITEADDGGRVRDSLRNLTESYLRRVVF 171

Query: 132 YWTDTLK-ALKTCEEVLPFAE 151
              D ++  L++C  +LP +E
Sbjct: 172 VNVDYIQIVLRSCLLLLPESE 192



 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 87/212 (41%), Gaps = 39/212 (18%)

Query: 432 DGIYRAIDIYLKTH----PWMTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQV 487
           D +YR +D Y+K        MT+ EK QIC  ++C KLS     HA QN ++PLR +V+ 
Sbjct: 244 DLLYRIVDAYVKVKREHDGEMTEEEKVQICNSIDCDKLSPPLLLHAVQNPKMPLRFIVRA 303

Query: 488 LFFEQLKLRTSVAGWFFTS-----------ENLENTQNLSGNLALLRNIDGNTPPNPVL- 535
           +  EQL  R S+      +           E     ++ S  L  L   D     N  L 
Sbjct: 304 MLQEQLNTRHSIMVAAVAASCAAPTGVRHREIATEARDSSVTLGSLLQRDTAARQNCRLR 363

Query: 536 -AFDNMKDRVSELEKECLTMKHELEKMMKSNKGSWNMI----------LRKLSCRLIPKP 584
            A ++   R+  LEKE  TMK  L K  +  K   N++           R  S   + +P
Sbjct: 364 AAMNSTSSRIESLEKELDTMKRFLSKESEKQKSDRNIVESRSRSVMDSARSASFHCVHQP 423

Query: 585 SN------------GKVSKPCRKSKISPAQVE 604
           SN              +S   R+ + SP Q +
Sbjct: 424 SNVNKTQRGDRGSVSNLSTTYRRRRASPPQAQ 455


>AT3G49900.1 | Symbols:  | Phototropic-responsive NPH3 family
           protein | chr3:18500635-18502614 REVERSE LENGTH=517
          Length = 517

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 13/141 (9%)

Query: 17  WLCQSGLPSDVIIEIGDTSFHLHKFPLISRSKVLEGYMK-DLSSENEKSVLELHDLPGGA 75
           W   +    DV + +G T FHLHK PL S+S    GY+K  L+  NE ++    ++   A
Sbjct: 59  WSLANNSKPDVFVNVGGTRFHLHKDPL-SKS----GYLKRHLTGVNELTLSPPLNIT--A 111

Query: 76  KAFLLVAKFCYGVKMELTPSNVVILRCASDYLQMSEDYGEG----NLIIQTENFLNHIYG 131
           + F LVA FCYG  +ELTPSNVV LR A + L ++E    G    +L   TE++L  +  
Sbjct: 112 ETFSLVAGFCYGAHIELTPSNVVSLRIAVEVLLITEADDGGRVRDSLRNLTESYLRRVVF 171

Query: 132 YWTDTLK-ALKTCEEVLPFAE 151
              D ++  L++C  +LP +E
Sbjct: 172 VNVDYIQIVLRSCLLLLPESE 192



 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 36/209 (17%)

Query: 432 DGIYRAIDIYLKTHPW-MTDSEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFF 490
           D +YR +D Y+K H   MT+ EK QIC  ++C KLS     HA QN ++PLR +V+ +  
Sbjct: 244 DLLYRIVDAYVKEHDGEMTEEEKVQICNSIDCDKLSPPLLLHAVQNPKMPLRFIVRAMLQ 303

Query: 491 EQLKLRTSVAGWFFTSENLENT-----------QNLSGNLALLRNIDGNTPPNPVL--AF 537
           EQL  R S+      +     T           ++ S  L  L   D     N  L  A 
Sbjct: 304 EQLNTRHSIMVAAVAASCAAPTGVRHREIATEARDSSVTLGSLLQRDTAARQNCRLRAAM 363

Query: 538 DNMKDRVSELEKECLTMKHELEKMMKSNKGSWNMI----------LRKLSCRLIPKPSN- 586
           ++   R+  LEKE  TMK  L K  +  K   N++           R  S   + +PSN 
Sbjct: 364 NSTSSRIESLEKELDTMKRFLSKESEKQKSDRNIVESRSRSVMDSARSASFHCVHQPSNV 423

Query: 587 -----------GKVSKPCRKSKISPAQVE 604
                        +S   R+ + SP Q +
Sbjct: 424 NKTQRGDRGSVSNLSTTYRRRRASPPQAQ 452