Miyakogusa Predicted Gene

Lj5g3v1749230.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1749230.2 tr|E0U712|E0U712_CYAP2 Vault protein
inter-alpha-trypsin domain protein OS=Cyanothece sp. (strain
PC,27.76,1e-18,no description,NULL; VWA,von Willebrand factor, type A;
vWA-like,NULL; coiled-coil,NULL; INTER-ALPHA,CUFF.55921.2
         (249 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19110.1 | Symbols:  | inter-alpha-trypsin inhibitor heavy ch...   291   3e-79
AT1G72500.1 | Symbols:  | LOCATED IN: plasma membrane; EXPRESSED...   260   7e-70

>AT1G19110.1 | Symbols:  | inter-alpha-trypsin inhibitor heavy
           chain-related | chr1:6602270-6605766 FORWARD LENGTH=754
          Length = 754

 Score =  291 bits (745), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 131/249 (52%), Positives = 186/249 (74%)

Query: 1   MDVNFVIGGGTNILRPLNTAIEMLSGAQSSVPIIFLVTDGTVEDERQICDLVKNHMTNGE 60
           M+ NFV+  GTN+L PL  A+EMLS  + S+P+IF VTDG+VEDER ICD++K H+ +  
Sbjct: 395 MNKNFVVADGTNMLPPLEKAVEMLSNTRGSIPMIFFVTDGSVEDERHICDVMKKHLASAG 454

Query: 61  SICPRVYTFGIGSFCNHYFLRMLAAIGRGQYDAAVDVDLVEPRMLTLFEKASSLILANIK 120
           S+ PR++TFG+G FCNHYFL+MLA I  GQ+++  + D +E RM  LF KA S IL NI 
Sbjct: 455 SVFPRIHTFGLGVFCNHYFLQMLANISCGQHESVYNTDHIEERMDKLFTKALSTILVNIA 514

Query: 121 MDVLDDIDQLEVYPSHIPDLSTEGPLILSGRYKGNFPETVKVKGIMADFSDFVIDMKIQT 180
           ++ L  +D++EVYPS+IPDL++  PL++ GRY+G FPE V  KG++ D S F  D+ +Q+
Sbjct: 515 IEPLQSLDEVEVYPSNIPDLTSASPLMIYGRYRGKFPENVIAKGLLGDLSSFSTDLTVQS 574

Query: 181 AKDIPVQRVCARDQIEHLTAQAWLSENKQLEQQVAKLSLQTGFMSEYTRMVVLENDHLKK 240
           AKD+P+ +V A++ I+ LTA+AW SE+KQL++++AKLS+QTG +SEYTRM+ LEN    K
Sbjct: 575 AKDMPLDKVFAKNVIDLLTAEAWFSEDKQLKEKIAKLSIQTGVLSEYTRMIQLENTEELK 634

Query: 241 AKESAGGKE 249
             E+ G K+
Sbjct: 635 PSETGGKKK 643


>AT1G72500.1 | Symbols:  | LOCATED IN: plasma membrane; EXPRESSED
           IN: 23 plant structures; EXPRESSED DURING: 13 growth
           stages; CONTAINS InterPro DOMAIN/s: von Willebrand
           factor, type A (InterPro:IPR002035); BEST Arabidopsis
           thaliana protein match is: inter-alpha-trypsin inhibitor
           heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast
           hits to 1406 proteins in 307 species: Archae - 6;
           Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110;
           Viruses - 0; Other Eukaryotes - 226 (source: NCBI
           BLink). | chr1:27295336-27298556 REVERSE LENGTH=756
          Length = 756

 Score =  260 bits (664), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 121/233 (51%), Positives = 169/233 (72%), Gaps = 1/233 (0%)

Query: 1   MDVNFVIGGGTNILRPLNTAIEMLSGAQSSVPIIFLVTDGTVEDERQICDLVKNHMT-NG 59
           +D N +  GGTN+L PL  A+++L G+   VP+++LVTDG+VE+ER+IC  +K   + NG
Sbjct: 393 LDSNLIANGGTNMLLPLKQAMKLLEGSNIGVPLVYLVTDGSVENEREICHAMKESCSRNG 452

Query: 60  ESICPRVYTFGIGSFCNHYFLRMLAAIGRGQYDAAVDVDLVEPRMLTLFEKASSLILANI 119
           +SI PR+ TFGIGSFCNHYFL+MLA IG G YD   + D  E +M  LFE ASS I+AN 
Sbjct: 453 KSISPRISTFGIGSFCNHYFLQMLARIGNGYYDGTNNTDSFEHQMSRLFEIASSTIVANT 512

Query: 120 KMDVLDDIDQLEVYPSHIPDLSTEGPLILSGRYKGNFPETVKVKGIMADFSDFVIDMKIQ 179
             D L  +  +E++P  +PD++   PLILSGRYKG FP+ V+++G +AD S F I++ +Q
Sbjct: 513 TFDALKLLRSVELFPCQVPDITLGDPLILSGRYKGEFPDEVELRGTLADMSCFTIELTVQ 572

Query: 180 TAKDIPVQRVCARDQIEHLTAQAWLSENKQLEQQVAKLSLQTGFMSEYTRMVV 232
            AKDIP+ +V AR QI  LTA+AW  + K+L+++V +LS+QTGF SEYT+MV+
Sbjct: 573 KAKDIPLDKVLARRQINELTARAWFEDKKELQEKVMRLSIQTGFPSEYTQMVL 625