Miyakogusa Predicted Gene

Lj5g3v1699140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1699140.1 tr|G7JKH2|G7JKH2_MEDTR Integrator complex
subunit-like protein OS=Medicago truncatula GN=MTR_4g13291,72.67,0,GB
DEF: HYPOTHETICAL PROTEIN DL3335W (HYPOTHETICAL PROTEIN
AT4G14590),NULL; FAMILY NOT NAMED,NULL;
D,NODE_22403_length_1831_cov_33.394867.path2.1
         (473 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14590.1 | Symbols: emb2739 | embryo defective 2739 | chr4:83...   512   e-145

>AT4G14590.1 | Symbols: emb2739 | embryo defective 2739 |
           chr4:8374391-8375962 FORWARD LENGTH=508
          Length = 508

 Score =  512 bits (1319), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 257/457 (56%), Positives = 332/457 (72%), Gaps = 27/457 (5%)

Query: 4   KLTLTSPHEAETQIEISLRQAFISLEPSLKPPFSLAIPNSDDYTHLNRAILHGVLAEPHL 63
           KL   S HE E Q+E+SLRQAF +L+P L+PPFSL +P+  +Y  LN+AI++GVL EP+ 
Sbjct: 9   KLIRVSLHEVENQLELSLRQAFENLQPKLRPPFSLELPDPQEYLELNKAIVYGVLCEPNS 68

Query: 64  AKTHIKHLHGIVTDGYSTFINLLLDIVHTLYPKLLAPVKTQLLWVTEEMVHVSAIGFEPX 123
           +KTHIKHLH +VTDGY+ F +LL+ IV  LY KL+   K QL+WVT+EM+ VS++G E  
Sbjct: 69  SKTHIKHLHALVTDGYAFFTSLLIGIVVELYVKLVDSAKIQLIWVTKEMIDVSSVGIEDL 128

Query: 124 XXXXXRQILGGDFSDGNLWLCSKMVTLFLENWECFLDEAPSVLCSALYVFLRVLHDHCSV 183
                R+I                ++LFLE WEC LD++P VL SALY FLR+L DH  V
Sbjct: 129 VVSLLRRI---------------GISLFLEKWECLLDDSPLVLTSALYSFLRLLADHYRV 173

Query: 184 -NVEKLKTLRRLEIHFCVKVVREEFHLCLKIGRDFIRLLQDLVHVPEFQAIWKDLMVNPS 242
             V KL+ ++RLEI FCVK+ RE+ HL LKIGRD I LLQDL HV EF+ IW DL+ N  
Sbjct: 174 LGVVKLENVKRLEIKFCVKMFREQLHLSLKIGRDLILLLQDLSHVSEFREIWNDLVSN-- 231

Query: 243 SFNTPEFVGVSQFYHTRTSSKYALLRISPEMETQLRFLLTYVKFGNHKRHQLWFGRKFLN 302
                     S+ Y  +TSS+Y LLRI+PEMETQLRFLL  VK G+HKRHQ+WF +KFL 
Sbjct: 232 --------HCSEIYQLKTSSRYFLLRITPEMETQLRFLLGNVKLGSHKRHQIWFLKKFLL 283

Query: 303 EPDKETVIVDMVKFICCAHHPPNEIIQSDIVPRWAVIGWLLKCCRKN-HVENSVKLALFY 361
            P+KET+++D+V+F+CC  HP NEII+S+I+PRWA+IGWLL+ CR+N H+E SV LALFY
Sbjct: 284 GPEKETLLIDIVRFVCCVIHPTNEIIRSEIMPRWAIIGWLLELCRQNHHIERSVMLALFY 343

Query: 362 DWLFFDGRVDNIMNIEPAMLLMVHCIPKYIDITNALLGFLLHLLDTYDVQHKDVIVKGVG 421
           DWLFFD R+DNIMN+EPA LLMV  IP+Y  IT++LL FLLHL++TYD+  +D IV+G+ 
Sbjct: 344 DWLFFDERIDNIMNVEPAALLMVWSIPQYPHITHSLLEFLLHLVETYDITRRDTIVRGLT 403

Query: 422 SAFHSLASKGVIQSLDVLTSCPALSPLLRECLGRLLS 458
           SAF  +  KGVI+SLD+  + PAL+P L++ L  LLS
Sbjct: 404 SAFREIERKGVIRSLDIFLANPALAPDLKKKLANLLS 440