Miyakogusa Predicted Gene

Lj5g3v1699110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1699110.1 Non Chatacterized Hit- tr|I3SX86|I3SX86_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.34,0,no
description,Globin, structural domain; PLANTGLOBIN,Leghaemoglobin;
Globin,Globin; seg,NULL; NON-S,CUFF.55796.1
         (152 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10520.1 | Symbols: AHB2, GLB2, ARATH GLB2, NSHB2, ATGLB2, HB...   144   2e-35
AT2G16060.1 | Symbols: GLB1, AHB1, ARATH GLB1, NSHB1, ATGLB1, HB...   108   9e-25

>AT3G10520.1 | Symbols: AHB2, GLB2, ARATH GLB2, NSHB2, ATGLB2, HB2 |
           haemoglobin 2 | chr3:3276516-3277765 REVERSE LENGTH=158
          Length = 158

 Score =  144 bits (364), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 96/148 (64%)

Query: 4   FSEEQEALVNSSWEAFSQNIPQLSIIFYTSILEKAPEAKAMFSFLKDSDGVPKDNLDLEA 63
           F+E+QEALV  SWE   Q+IP+ S+ F++ ILE AP AK +FSFL+DSD VP +N  L+A
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 64  HCEKVFELTRNSALQLRAKGKVEVERIALKFLGYVHAQRRVLDPHFXXXXXXXXXXXXXX 123
           H  KVF++T  +A+QLR +GKV V    L++LG +H +  V+DPHF              
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

Query: 124 MGDKWSEEVSNAWGIAYDELAGVIKKGM 151
           +G+K++EEV  AW  AYD LA  IK  M
Sbjct: 126 LGEKYNEEVEGAWSQAYDHLALAIKTEM 153


>AT2G16060.1 | Symbols: GLB1, AHB1, ARATH GLB1, NSHB1, ATGLB1, HB1 |
           hemoglobin 1 | chr2:6982782-6983522 REVERSE LENGTH=160
          Length = 160

 Score =  108 bits (271), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 77/150 (51%)

Query: 3   TFSEEQEALVNSSWEAFSQNIPQLSIIFYTSILEKAPEAKAMFSFLKDSDGVPKDNLDLE 62
            F+EEQEALV  SW    +N  +L +  +  I E AP  K MFSFL+DS    + N  L+
Sbjct: 8   VFTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAEQNPKLK 67

Query: 63  AHCEKVFELTRNSALQLRAKGKVEVERIALKFLGYVHAQRRVLDPHFXXXXXXXXXXXXX 122
            H   VF +   SA+QLR  GKV V    LK LG  H++  V+D HF             
Sbjct: 68  PHAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLETIKE 127

Query: 123 XMGDKWSEEVSNAWGIAYDELAGVIKKGMS 152
            + + WS E+  AWG AYD L   IK  M+
Sbjct: 128 AVPEMWSPEMKVAWGQAYDHLVAAIKAEMN 157