Miyakogusa Predicted Gene

Lj5g3v1696960.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1696960.1 tr|O23019|O23019_ARATH T1G11.9 protein
OS=Arabidopsis thaliana GN=T1G11.9 PE=4 SV=1,34.36,0.000000000000003,
,CUFF.55800.1
         (178 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04650.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...   122   2e-28

>AT1G04650.1 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr1:1294893-1298903 REVERSE LENGTH=997
          Length = 997

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 109/166 (65%), Gaps = 2/166 (1%)

Query: 13  ILAAISSSETVEDRVQLFTDLGRVDLKNLSDSDHASAMNCFLVFWENFTCLDVTQCMLNR 72
           +L  I SS+ +E+R QL T L ++D++   +SD  S +      WE+FTCLDV+ C+LN+
Sbjct: 8   LLEEIKSSDLIENRAQLLTRLSQLDVEE--NSDLPSFVESLTTLWEDFTCLDVSLCLLNK 65

Query: 73  SILQAASKYIDFNLSNCLPQTLNLGVKASIWCAKHLKMTLLSTEESQDDEHSSVFYQLLL 132
           +IL  ASKY+  +  +C    L   +K S WCAKHL M+++S EESQ++EHS++F+QLLL
Sbjct: 66  AILPVASKYLALDRPDCSHYFLAFAIKVSQWCAKHLNMSVMSMEESQEEEHSNIFFQLLL 125

Query: 133 EILRFSSSTFSALLEFTDFGDKELVDILENFILEALNLTKDSISDA 178
           + LRFS+S+F+A+ +     D      +  F+ E LNLTK+ I ++
Sbjct: 126 DYLRFSASSFTAIGKTCFMTDDASAVTVHKFVSEQLNLTKELIMNS 171