Miyakogusa Predicted Gene

Lj5g3v1516760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1516760.1 Non Chatacterized Hit- tr|I3T486|I3T486_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,39.52,0.000000000000001,seg,NULL,CUFF.55391.1
         (195 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G56420.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   217   3e-57
AT1G12530.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    81   4e-16

>AT1G56420.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in
           16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi
           - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2
           (source: NCBI BLink). | chr1:21122772-21124234 REVERSE
           LENGTH=183
          Length = 183

 Score =  217 bits (553), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 120/179 (67%), Positives = 131/179 (73%), Gaps = 20/179 (11%)

Query: 1   MDSSPVITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEK 60
           M SS VI PEDVLE LMNDGTIDALRL+IINQLKANEELKSTTIKMAE+SKVLNTPGAEK
Sbjct: 1   MSSSSVIKPEDVLEHLMNDGTIDALRLRIINQLKANEELKSTTIKMAEESKVLNTPGAEK 60

Query: 61  QTKRELFDALRRELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLSGQEPPLFP 120
           QTKRELFDALR+ELE  VLEKASKSVWDLI++ +GLGKEI+ETVERVFC LSGQEPP + 
Sbjct: 61  QTKRELFDALRQELEGPVLEKASKSVWDLIIEKDGLGKEINETVERVFCHLSGQEPPFYS 120

Query: 121 LQNGEPQP---DKEVDSXXXXXXXXXXXXXXXXXXTITPLKKRSYSEINLE--ADETAT 174
             N E  P   DKE +                   + T  KKRS SE+N     DE AT
Sbjct: 121 SSNVEKTPMEIDKETE---------------VKDSSKTKPKKRSLSEVNSSEGIDEVAT 164


>AT1G12530.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in
           13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr1:4269122-4270771 REVERSE
           LENGTH=193
          Length = 193

 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 66/106 (62%)

Query: 7   ITPEDVLESLMNDGTIDALRLKIINQLKANEELKSTTIKMAEQSKVLNTPGAEKQTKREL 66
           I+ E+V+E L +DG  D LRLKII +LK NE+L++  I + ++S  L   GA+    R+L
Sbjct: 8   ISKEEVVEKLKDDGDFDRLRLKIIRRLKENEDLRNNMISVVKESTSLKRHGAQNMKTRQL 67

Query: 67  FDALRRELEASVLEKASKSVWDLILDNNGLGKEISETVERVFCRLS 112
            DA+  E+ + +L + S  +W +I   +G+  EI ETV+ V+  LS
Sbjct: 68  SDAIFEEVGSKMLSQLSDGLWGIIRSEDGMKNEIRETVQSVYATLS 113