Miyakogusa Predicted Gene
- Lj5g3v0552230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0552230.1 tr|G7IDN1|G7IDN1_MEDTR Senescence-associated
protein SAG102 OS=Medicago truncatula GN=MTR_1g071780
P,42.76,4e-18,seg,NULL; DUF581,Protein of unknown function
DUF581,NODE_63200_length_1776_cov_19.108671.path1.1
(418 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25690.2 | Symbols: | Protein of unknown function (DUF581) |... 120 3e-27
AT2G25690.1 | Symbols: | Protein of unknown function (DUF581) |... 120 3e-27
AT5G11460.1 | Symbols: | Protein of unknown function (DUF581) |... 97 1e-20
AT3G63210.1 | Symbols: MARD1 | Protein of unknown function (DUF5... 82 1e-15
AT3G22550.1 | Symbols: | Protein of unknown function (DUF581) |... 77 2e-14
AT1G79970.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 60 3e-09
AT1G79970.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 60 3e-09
AT1G22160.1 | Symbols: | Protein of unknown function (DUF581) |... 54 3e-07
AT1G74940.1 | Symbols: | Protein of unknown function (DUF581) |... 52 7e-07
AT5G20700.1 | Symbols: | Protein of unknown function (DUF581) |... 49 6e-06
>AT2G25690.2 | Symbols: | Protein of unknown function (DUF581) |
chr2:10940530-10941649 REVERSE LENGTH=324
Length = 324
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 147/342 (42%), Gaps = 87/342 (25%)
Query: 52 LFVGLGPKG--LLDSDSVRSPTSPLDVTLLSNLGN--LLRTPRSSSIEGQQQHRSWDC-- 105
L +GL K + DSD VRSP SPL+ +LS + + LR+PRSS H + C
Sbjct: 43 LLIGLNNKNKCISDSDFVRSPKSPLEFRVLSTMADSFFLRSPRSS----LTAHLNCCCGP 98
Query: 106 -AKVGLGIIDSLEDCSNVSGKINIXXXXXXXXXXXXPQMITKPPTCKSCVDPVQASKSLP 164
AKVGL I+DSL D P ++ P C + + P
Sbjct: 99 AAKVGLSIVDSLGD-----------------DRCLLPDIVFGPALRIKCSEVMDKH---P 138
Query: 165 KDFYKLPYTHNSSSANHKGESTVLFEIGETPLEYESLGXXXXXXXXXXXXXXXXXGLTGS 224
K + + N S S V+FEIG+ E E +G L+ S
Sbjct: 139 KLLFPVA---NKSKKIENERSGVVFEIGDNSSETEPVGLRNRSFSANDCLRKTRV-LSRS 194
Query: 225 NFDSDSEILSSPPHFIGGSHNPNTLPPAELXXXXXXXXXXXXXXEFIKSLSASEIENSED 284
+ + S GS N + S ++ ED
Sbjct: 195 KLGQEGDFPGS------GSDN-----------------------------AFSSEDDMED 219
Query: 285 YTCVISHGPNPKTTHIFCDSILEVHANDLKKYCKSXXXXXXXAKLSSPMVNKLQTPNQFP 344
YTC+I+HGPNPKTTHI+ D +LE H N+LK NK + + FP
Sbjct: 220 YTCIIAHGPNPKTTHIYGDRVLECHKNELK----------------GDEDNKEKFGSVFP 263
Query: 345 SGDFLCVCYYCNNELVEGEDIYIYRGEKSFCSPACRAMEIMI 386
S +FL +C +CN +L G+DIY+YR EKSFCS CR+ E+MI
Sbjct: 264 SDNFLGICNFCNKKLGGGDDIYMYR-EKSFCSEECRSEEMMI 304
>AT2G25690.1 | Symbols: | Protein of unknown function (DUF581) |
chr2:10940530-10941649 REVERSE LENGTH=324
Length = 324
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 147/342 (42%), Gaps = 87/342 (25%)
Query: 52 LFVGLGPKG--LLDSDSVRSPTSPLDVTLLSNLGN--LLRTPRSSSIEGQQQHRSWDC-- 105
L +GL K + DSD VRSP SPL+ +LS + + LR+PRSS H + C
Sbjct: 43 LLIGLNNKNKCISDSDFVRSPKSPLEFRVLSTMADSFFLRSPRSS----LTAHLNCCCGP 98
Query: 106 -AKVGLGIIDSLEDCSNVSGKINIXXXXXXXXXXXXPQMITKPPTCKSCVDPVQASKSLP 164
AKVGL I+DSL D P ++ P C + + P
Sbjct: 99 AAKVGLSIVDSLGD-----------------DRCLLPDIVFGPALRIKCSEVMDKH---P 138
Query: 165 KDFYKLPYTHNSSSANHKGESTVLFEIGETPLEYESLGXXXXXXXXXXXXXXXXXGLTGS 224
K + + N S S V+FEIG+ E E +G L+ S
Sbjct: 139 KLLFPVA---NKSKKIENERSGVVFEIGDNSSETEPVGLRNRSFSANDCLRKTRV-LSRS 194
Query: 225 NFDSDSEILSSPPHFIGGSHNPNTLPPAELXXXXXXXXXXXXXXEFIKSLSASEIENSED 284
+ + S GS N + S ++ ED
Sbjct: 195 KLGQEGDFPGS------GSDN-----------------------------AFSSEDDMED 219
Query: 285 YTCVISHGPNPKTTHIFCDSILEVHANDLKKYCKSXXXXXXXAKLSSPMVNKLQTPNQFP 344
YTC+I+HGPNPKTTHI+ D +LE H N+LK NK + + FP
Sbjct: 220 YTCIIAHGPNPKTTHIYGDRVLECHKNELK----------------GDEDNKEKFGSVFP 263
Query: 345 SGDFLCVCYYCNNELVEGEDIYIYRGEKSFCSPACRAMEIMI 386
S +FL +C +CN +L G+DIY+YR EKSFCS CR+ E+MI
Sbjct: 264 SDNFLGICNFCNKKLGGGDDIYMYR-EKSFCSEECRSEEMMI 304
>AT5G11460.1 | Symbols: | Protein of unknown function (DUF581) |
chr5:3657064-3658388 REVERSE LENGTH=344
Length = 344
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 277 SEIENSEDYTCVISHGPNPKTTHIFCDSILE-VHANDLKKYCKSXXXXXXXAKLSSPMVN 335
S++E SEDYTCVISHGPNPKTTH + D ++E V +LK C A +P+
Sbjct: 202 SDMEISEDYTCVISHGPNPKTTHFYGDQVMESVEREELKNRCCKNEKESIFA--VAPL-- 257
Query: 336 KLQTP-NQFPSGDFLCVCYYCNNELVEGEDIYIYRGEKSFCSPACRAMEI 384
L TP + P DFL CY C+ +L GEDIY+Y G K+FCS CR+ EI
Sbjct: 258 DLTTPVDVLPPKDFLSFCYGCSKKLGMGEDIYMYSGYKAFCSSECRSKEI 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 63 DSDSVRSPTSPLDVTLLSNLGNLLRTPRSSSIEGQQQHRSWDCAKVGLGIIDSLED 118
D +S SPTSPLD L S LGN S SI +Q RSWD KVGL I+ SL D
Sbjct: 42 DYESAWSPTSPLDFRLFSTLGNPFAASSSRSIWRGKQ-RSWDSGKVGLSIVHSLVD 96
>AT3G63210.1 | Symbols: MARD1 | Protein of unknown function (DUF581)
| chr3:23354019-23354906 REVERSE LENGTH=263
Length = 263
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 19/115 (16%)
Query: 272 KSLSASEIENSEDYTCVISHGPNPKTTHIFCDSILEVHANDLKKYCKSXXXXXXXAKLSS 331
K L+ SEI+ +EDYT VISHGPNP THIF +S+ V A L
Sbjct: 163 KVLAVSEIDQTEDYTRVISHGPNPTITHIFDNSVF-VEATPC------------SVPLPQ 209
Query: 332 PMVNKLQTPNQFPSGDFLCVCYYCNNELVEGEDIYIYRGEKSFCSPACRAMEIMI 386
P + T FL C+ C L + +DIYIYRGEK FCS CR E+++
Sbjct: 210 PAMETKST------ESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLL 258
>AT3G22550.1 | Symbols: | Protein of unknown function (DUF581) |
chr3:7991827-7992805 REVERSE LENGTH=267
Length = 267
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 276 ASEIENSEDYTCVISHGPNPKTTHIFCDSILEVHANDLKKYCKSXXXXXXXAKLSSPMVN 335
AS++E SEDYTCV HGPNP+T HIF + I+E + SS VN
Sbjct: 164 ASDMELSEDYTCVTCHGPNPRTIHIFDNCIVESQPGVV-------------FFRSSDPVN 210
Query: 336 KLQTPNQFPSGDFLCVCYYCNNELVEGEDIYIYRGEKSFCSPACRAMEIMI 386
+ + + P FL C C L +DI++YRG+++FCS CR++E+M+
Sbjct: 211 ESDS-DYSPPDSFLSCCCNCKKSLGPRDDIFMYRGDRAFCSSECRSIEMMM 260
>AT1G79970.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (DUF581)
(TAIR:AT2G25690.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr1:30082773-30083592 FORWARD LENGTH=240
Length = 240
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 270 FIKSLSASEIENSEDYTCVISHGPNPKTTHIFCDSILEVHANDLKK 315
+ +SLS E+ SEDYTC+ISHGPNPKTT+IF D IL+ DL K
Sbjct: 141 YSRSLSGREMALSEDYTCIISHGPNPKTTYIFGDCILDCDPKDLGK 186
>AT1G79970.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (DUF581)
(TAIR:AT2G25690.2); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr1:30082773-30083429 FORWARD LENGTH=218
Length = 218
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 270 FIKSLSASEIENSEDYTCVISHGPNPKTTHIFCDSILEVHANDLKK 315
+ +SLS E+ SEDYTC+ISHGPNPKTT+IF D IL+ DL K
Sbjct: 141 YSRSLSGREMALSEDYTCIISHGPNPKTTYIFGDCILDCDPKDLGK 186
>AT1G22160.1 | Symbols: | Protein of unknown function (DUF581) |
chr1:7823238-7823774 FORWARD LENGTH=147
Length = 147
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 345 SGDFLCVCYYCNNELVEGEDIYIYRGEKSFCSPACRAMEIMI 386
S DFL C C LV G DIY+YRG+++FCS CR +I +
Sbjct: 75 SEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITV 116
>AT1G74940.1 | Symbols: | Protein of unknown function (DUF581) |
chr1:28146284-28147065 FORWARD LENGTH=222
Length = 222
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 21/108 (19%)
Query: 283 EDYTCVISHGPNPKTTHIFCDSILEVHANDLKKYCKSXXXXXXXAKLSSPMVNKLQTP-- 340
E+YT V S PN T + D E+ ND ++ K PMV + P
Sbjct: 95 EEYTYVTS--PNGPTKVYYNDDGFELSENDYRRVHK-------------PMVTVDEPPVI 139
Query: 341 -NQFPSG--DFLCVCYYCNNELVEGEDIYIYRGEKSFCSPACRAMEIM 385
Q G +FL C C +L +G+DIY+Y+GE FCS CR+++IM
Sbjct: 140 ERQSVRGPTEFLSSCCLCKKKL-QGKDIYMYKGEMGFCSAECRSVQIM 186
>AT5G20700.1 | Symbols: | Protein of unknown function (DUF581) |
chr5:7006178-7007003 REVERSE LENGTH=248
Length = 248
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 342 QFPSGDFLCVCYYCNNELVEGEDIYIYRGEKSFCSPACRAMEI 384
+F FL CY C +L G+DI+IYRGEK+FCS CR+ I
Sbjct: 176 EFQGLGFLNSCYLCRKKL-HGQDIFIYRGEKAFCSTECRSSHI 217