Miyakogusa Predicted Gene

Lj5g3v0110900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0110900.1 Non Chatacterized Hit- tr|K4AXP5|K4AXP5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.86,6e-19,Acid proteases,Peptidase aspartic; seg,NULL; no
description,Peptidase aspartic, catalytic; BASIC 7S ,gene.g58409.t1.1
         (237 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03220.1 | Symbols:  | Eukaryotic aspartyl protease family pr...    64   6e-11
AT1G03230.1 | Symbols:  | Eukaryotic aspartyl protease family pr...    59   3e-09
AT5G19110.1 | Symbols:  | Eukaryotic aspartyl protease family pr...    51   7e-07
AT5G19100.1 | Symbols:  | Eukaryotic aspartyl protease family pr...    51   9e-07

>AT1G03220.1 | Symbols:  | Eukaryotic aspartyl protease family
           protein | chr1:787143-788444 FORWARD LENGTH=433
          Length = 433

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 12/127 (9%)

Query: 111 RTQLAIPAQLSSSNNFPLKFSLCLPSSXXXXXXXXXXXXAPNSLPHQNAXXXXXXXXKFL 170
           R  + +P+Q +++ +F  KF++CL S                 LP              L
Sbjct: 181 RHNIGLPSQFAAAFSFHRKFAVCLTSGKGVAFFGNGPYVF---LPGIQISS--------L 229

Query: 171 QTTSLIINPFSTAPIFREGAASYEYFIDVKSIKVGGKVLNFKRSLLSID-NKGNGGTKIS 229
           QTT L+INP STA  F +G  S EYFI V +I++  K +    +LL I+ + G GGTKIS
Sbjct: 230 QTTPLLINPVSTASAFSQGEKSSEYFIGVTAIQIVEKTVPINPTLLKINASTGIGGTKIS 289

Query: 230 TMNPFSV 236
           ++NP++V
Sbjct: 290 SVNPYTV 296



 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 32  FVLPIAKDPITDLFYTSVGIGTPLHKLNLVIDLGGPFLWYDCNNHYNSSTYRHVPCDSKK 91
            +LP+ KD  T  + T +   TPL   ++V DLGG  LW DC+  Y SSTY+   C+S  
Sbjct: 31  LLLPVTKDQSTLQYTTVINQRTPLVPASVVFDLGGRELWVDCDKGYVSSTYQSPRCNSAV 90

Query: 92  C--PGDGGCTDCNGP 104
           C   G   C  C  P
Sbjct: 91  CSRAGSTSCGTCFSP 105


>AT1G03230.1 | Symbols:  | Eukaryotic aspartyl protease family
           protein | chr1:790110-791414 FORWARD LENGTH=434
          Length = 434

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 26  SLKLHPFVLPIAKDPITDLFYTSVGIGTPLHKLNLVIDLGGPFLWYDCNNHYNSSTYRHV 85
           S +    +LP+ KDP T  + T +   TPL   ++V DLGG   W DC+  Y S+TYR  
Sbjct: 26  SFRPKALLLPVTKDPSTLQYTTVINQRTPLVPASVVFDLGGREFWVDCDQGYVSTTYRSP 85

Query: 86  PCDSKKCPGDG--GCTDCNGP 104
            C+S  C   G   C  C  P
Sbjct: 86  RCNSAVCSRAGSIACGTCFSP 106



 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 12/127 (9%)

Query: 111 RTQLAIPAQLSSSNNFPLKFSLCLPSSXXXXXXXXXXXXAPNSLPHQNAXXXXXXXXKFL 170
           R  + +P Q +++ +F  KF++CL S                 LP              L
Sbjct: 182 RHNIGLPLQFAAAFSFNRKFAVCLTSGRGVAFFGNGPYVF---LPGIQISR--------L 230

Query: 171 QTTSLIINPFSTAPIFREGAASYEYFIDVKSIKVGGKVLNFKRSLLSID-NKGNGGTKIS 229
           Q T L+INP +T   F +G  S EYFI V +IK+  K L    +LL I+ + G GGTKIS
Sbjct: 231 QKTPLLINPGTTVFEFSKGEKSPEYFIGVTAIKIVEKTLPIDPTLLKINASTGIGGTKIS 290

Query: 230 TMNPFSV 236
           ++NP++V
Sbjct: 291 SVNPYTV 297


>AT5G19110.1 | Symbols:  | Eukaryotic aspartyl protease family
          protein | chr5:6411720-6413170 REVERSE LENGTH=405
          Length = 405

 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 32 FVLPIAKDPITDLFYTSVGIGTPLHK-LNLVIDLGGPFLWYDCNNHYNSSTYRHVPCDSK 90
          ++LPI K   T+LFYT+  +G+     +NL++DLG    W DC    + S+ R V C S 
Sbjct: 26 YLLPITKHEPTNLFYTTFNVGSAAKSPVNLLLDLGTNLTWLDCRKLKSLSSLRLVTCQSS 85

Query: 91 KC---PGDG 96
           C   PG+G
Sbjct: 86 TCKSIPGNG 94


>AT5G19100.1 | Symbols:  | Eukaryotic aspartyl protease family
           protein | chr5:6408242-6409417 REVERSE LENGTH=391
          Length = 391

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 93/265 (35%), Gaps = 81/265 (30%)

Query: 28  KLHPFVLPIAKDPITDLFYTSVGIGTPLHKLNLVIDLGGPF-LWYDCNNHYNSSTYRHVP 86
           K   F+ PI KD   +++   + IG+   +   V+DL G   L  +C     S+TY  + 
Sbjct: 26  KFQSFLHPIYKDTAKNIYTIPLSIGSTSSE-KFVLDLNGAAPLLQNCPTAAKSTTYHPIR 84

Query: 87  CDSKK---------CPGDG----------------------------------------- 96
           C S +         CP +                                          
Sbjct: 85  CGSTRCKYANPNFPCPNNVIAKKRTVCLSSDNSRLFRDTVPLLYTFNGVYTRDSEMSSSL 144

Query: 97  --GCTDCNGPFKGS---ITRTQLAIPAQLSSSNNFPLKFSLCLPSSXXXXXXXXXXXXAP 151
              CTD     K     +  T L+IP+QL S    P K +LCLPS+              
Sbjct: 145 TLTCTDGAPALKQRTIGLANTHLSIPSQLISMYQLPHKIALCLPSTE------------- 191

Query: 152 NSLPHQNAXXXXXXXXKFLQTTSLIINPFSTAPIFREGAASYEYFIDVKSIKVGGKVLNF 211
            S  H            +L     +   F++ P+   G +  EY IDVKSI++G K +  
Sbjct: 192 RSQSHNGDLWIGKGEYYYLPYDKDVSKIFASTPLIGNGKSG-EYLIDVKSIQIGAKTVPI 250

Query: 212 KRSLLSIDNKGNGGTKISTMNPFSV 236
                       G TKIST+ P++V
Sbjct: 251 PY----------GATKISTLAPYTV 265