Miyakogusa Predicted Gene

Lj4g3v3015060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3015060.1 Non Chatacterized Hit- tr|A9NL71|A9NL71_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,58.33,3e-17,seg,NULL; Tom7,Mitochondrial outer membrane translocase
complex, subunit Tom7,CUFF.52123.1
         (72 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G41685.1 | Symbols:  | Mitochondrial outer membrane transloca...    83   4e-17
AT1G64220.1 | Symbols: TOM7-2 | translocase of outer membrane 7 ...    80   4e-16

>AT5G41685.1 | Symbols:  | Mitochondrial outer membrane
          translocase complex, subunit Tom7 |
          chr5:16669419-16669646 REVERSE LENGTH=75
          Length = 75

 Score = 83.2 bits (204), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 34/49 (69%), Positives = 42/49 (85%)

Query: 24 TACECLKEWTTWTMRKAKVVTHYGFIPLIIIIGMNSDPKPQLSQLLSPV 72
          +  + +KEWT W+++KAKVVTHYGFIPL+I +GMNSDPKP L QLLSPV
Sbjct: 27 SKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLLSPV 75


>AT1G64220.1 | Symbols: TOM7-2 | translocase of outer membrane 7
          kDa subunit 2 | chr1:23833088-23833321 REVERSE
          LENGTH=77
          Length = 77

 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 39/46 (84%)

Query: 27 ECLKEWTTWTMRKAKVVTHYGFIPLIIIIGMNSDPKPQLSQLLSPV 72
          +  K+WT W+++KAKV THYGFIPLIIIIGMNSDPKP L  LLSPV
Sbjct: 32 KVFKDWTNWSLQKAKVATHYGFIPLIIIIGMNSDPKPHLFHLLSPV 77