Miyakogusa Predicted Gene

Lj4g3v2846170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2846170.1 tr|F2EA56|F2EA56_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,55.26,7e-18,Auxin_inducible,Auxin responsive SAUR protein;
seg,NULL,CUFF.51761.1
         (97 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53590.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    59   9e-10
AT3G61900.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    57   2e-09
AT4G00880.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    57   3e-09
AT2G46690.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    55   1e-08
AT3G43120.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    54   2e-08
AT3G03820.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    54   2e-08
AT5G20810.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    53   3e-08
AT5G20810.2 | Symbols:  | SAUR-like auxin-responsive protein fam...    53   4e-08
AT4G34780.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    53   5e-08
AT4G22620.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    53   5e-08
AT2G24400.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    52   8e-08
AT3G60690.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    52   1e-07
AT4G31320.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    51   1e-07
AT4G12410.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    51   2e-07
AT4G34800.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    51   2e-07
AT4G34790.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    50   3e-07
AT3G03850.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    49   9e-07
AT2G45210.1 | Symbols:  | SAUR-like auxin-responsive protein fam...    47   4e-06

>AT5G53590.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr5:21772107-21772535 FORWARD LENGTH=142
          Length = 142

 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           V KG +A+ VG  E+D+    R  +P+ +L H LF  LL  A + YG+  +GP+ +PC +
Sbjct: 46  VPKGCVAIMVG-HEDDEEGLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGV 104

Query: 63  DDFLHLRWQIEKE 75
           D+F H++  I++E
Sbjct: 105 DEFKHVQEVIDEE 117


>AT3G61900.1 | Symbols:  | SAUR-like auxin-responsive protein
          family  | chr3:22925813-22926379 FORWARD LENGTH=136
          Length = 136

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 3  VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
          V KG LA++VG +EE++   QR  +P++Y  H LF  LL  A E YG+  +G + +PC +
Sbjct: 30 VPKGCLAIKVGSKEEEK---QRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHV 86

Query: 63 DDFLHLRWQIEKE 75
          + F +++  I +E
Sbjct: 87 EVFRYVQDMINRE 99


>AT4G00880.1 | Symbols:  | SAUR-like auxin-responsive protein
          family  | chr4:366692-367060 REVERSE LENGTH=122
          Length = 122

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 4/74 (5%)

Query: 2  KVKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCS 61
          KV KG LAV+VG  EE +    R  IP+ Y  H LF  LL  A E +G+  +G + +PC 
Sbjct: 27 KVPKGCLAVKVGQGEEQE----RFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCH 82

Query: 62 LDDFLHLRWQIEKE 75
          +++F +++  I++E
Sbjct: 83 VEEFRYVQGLIDRE 96


>AT2G46690.1 | Symbols:  | SAUR-like auxin-responsive protein
          family  | chr2:19180904-19181269 FORWARD LENGTH=121
          Length = 121

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 3  VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
          V KG LA++VG + E+Q   QR  +P+ Y  H LF  LL  A + YG+  +G + +PC +
Sbjct: 24 VPKGCLAIKVGSQGEEQ---QRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHV 80

Query: 63 DDFLHLRWQIEKE 75
          ++F +++  I+ E
Sbjct: 81 EEFRYVQALIDGE 93


>AT3G43120.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr3:15094644-15095312 FORWARD LENGTH=160
          Length = 160

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 6/71 (8%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           V KG+LAV VG E       +R  IP  +L HSLF  LL++A E YG+   G L +PC +
Sbjct: 79  VPKGYLAVYVGPEL------RRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEV 132

Query: 63  DDFLHLRWQIE 73
           + F +L   IE
Sbjct: 133 ETFKYLLKCIE 143


>AT3G03820.1 | Symbols:  | SAUR-like auxin-responsive protein
          family  | chr3:976933-977223 REVERSE LENGTH=96
          Length = 96

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 4/70 (5%)

Query: 5  KGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGY-HTEGPLKLPCSLD 63
          KG+LAV VG   E Q   QR  +P+ YL   LF  LL +A E +G+ H  G L +PC  D
Sbjct: 29 KGFLAVYVG---ESQRKKQRHLVPVSYLNQPLFQALLIKAEEEFGFNHPMGGLTIPCPED 85

Query: 64 DFLHLRWQIE 73
           FL +  QI+
Sbjct: 86 TFLTVTSQIQ 95


>AT5G20810.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr5:7044791-7045555 FORWARD LENGTH=165
          Length = 165

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 6/66 (9%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           V KG LAV VG E       +R  IP  YL HSLF  LL++A E +G+   G L +PC +
Sbjct: 79  VPKGNLAVYVGPEL------RRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEV 132

Query: 63  DDFLHL 68
           + F +L
Sbjct: 133 ETFKYL 138


>AT5G20810.2 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr5:7044791-7045363 FORWARD LENGTH=190
          Length = 190

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 6/66 (9%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           V KG LAV VG E       +R  IP  YL HSLF  LL++A E +G+   G L +PC +
Sbjct: 79  VPKGNLAVYVGPEL------RRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEV 132

Query: 63  DDFLHL 68
           + F +L
Sbjct: 133 ETFKYL 138


>AT4G34780.1 | Symbols:  | SAUR-like auxin-responsive protein
          family  | chr4:16592397-16592717 REVERSE LENGTH=106
          Length = 106

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 1  MKVKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGY-HTEGPLKLP 59
          + V+KG  AV VG   ED+   +R  +PI YL H LF  LL +A + +G  H    L +P
Sbjct: 26 INVRKGHFAVYVG---EDEMETKRFVVPISYLNHPLFQALLRKAEDEFGTDHQRTYLTIP 82

Query: 60 CSLDDFLHLRWQIEKE 75
          C+ D FL +  ++++ 
Sbjct: 83 CAKDVFLDITSRLKRN 98


>AT4G22620.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr4:11907631-11908113 FORWARD LENGTH=160
          Length = 160

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           V +G L V VG   ED    +R+ +P+ Y  H LF  LL++A  VYG+   G + +PC +
Sbjct: 79  VPRGHLVVHVGESGEDT---RRVVVPVIYFNHPLFGELLEQAERVYGFEQPGRIMIPCRV 135

Query: 63  DDFLHLRWQI 72
            DF  ++ +I
Sbjct: 136 SDFEKVQMRI 145


>AT2G24400.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr2:10377993-10378529 REVERSE LENGTH=178
          Length = 178

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 6/63 (9%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           V KG+LAV VGLE+      +R  IP  YL H  F  LL  A E +G+   G L++PC +
Sbjct: 64  VPKGYLAVSVGLEK------KRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGVLRIPCEV 117

Query: 63  DDF 65
             F
Sbjct: 118 SVF 120


>AT3G60690.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr3:22435262-22435774 FORWARD LENGTH=170
          Length = 170

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           V KG  AV +G ++ D    QR+ +PI Y  H LF  LL  A E +G+  EG + +PC  
Sbjct: 88  VPKGHSAVYIGKKDGDF---QRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGITIPCPY 144

Query: 63  DDFLHLRWQIE 73
            DF  ++ +IE
Sbjct: 145 SDFKRVQTRIE 155


>AT4G31320.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr4:15193993-15194562 REVERSE LENGTH=189
          Length = 189

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 6/63 (9%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           + KG+LAV VG EE      +R +IP  YL H  F+ LL  A E +G+   G L++PC +
Sbjct: 80  IPKGYLAVSVGKEE------KRYKIPTEYLSHQAFHVLLREAEEEFGFEQAGILRIPCEV 133

Query: 63  DDF 65
             F
Sbjct: 134 AVF 136


>AT4G12410.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr4:7342956-7343429 REVERSE LENGTH=157
          Length = 157

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           V +G L V VG  ++D    +R+ +P+ Y  H LF  LL++A  V+G+   G + +PC +
Sbjct: 76  VPRGHLVVHVGESDDDT---RRVVVPVIYFNHPLFGELLEQAERVHGFDQPGRITIPCRV 132

Query: 63  DDFLHLRWQI 72
            DF  ++ +I
Sbjct: 133 SDFEKVQLRI 142


>AT4G34800.1 | Symbols:  | SAUR-like auxin-responsive protein
          family  | chr4:16596860-16597144 FORWARD LENGTH=94
          Length = 94

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 2  KVKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGY-HTEGPLKLPC 60
          +V KG +AV VG E E   S +R  +PI YL H  F  LL RA E +G+ H  G L +PC
Sbjct: 20 RVPKGHVAVYVGEEME---SKKRFVVPISYLNHPSFQGLLSRAEEEFGFNHPIGGLTIPC 76

Query: 61 SLDDFLHL 68
            + F+ L
Sbjct: 77 REETFVGL 84


>AT4G34790.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr4:16594539-16594865 FORWARD LENGTH=108
          Length = 108

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGY-HTEGPLKLPCS 61
           V KG +AV VG    +Q   +R  +PI YL H LF   L+RA E  G+ H+ G L +PC 
Sbjct: 39  VPKGHVAVYVG----EQMEKKRFVVPISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCR 94

Query: 62  LDDFLHL 68
            + FL+L
Sbjct: 95  EESFLYL 101


>AT3G03850.1 | Symbols:  | SAUR-like auxin-responsive protein
          family  | chr3:983197-983478 FORWARD LENGTH=93
          Length = 93

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)

Query: 5  KGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGY-HTEGPLKLPCSLD 63
          KG+LAV VG  ++ Q    R  +P+ YL   LF  LL +  E +G+ H  G L +PC +D
Sbjct: 27 KGFLAVYVGESQKKQ----RHFVPVSYLNQPLFQDLLSKCEEEFGFDHPMGGLTIPCPVD 82

Query: 64 DFLHLRWQIE 73
           F+ +  Q++
Sbjct: 83 TFISITSQLQ 92


>AT2G45210.1 | Symbols:  | SAUR-like auxin-responsive protein family
            | chr2:18641884-18642372 FORWARD LENGTH=162
          Length = 162

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 3   VKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSL 62
           V +G LA+ VG ++ D C   R+ +PI Y  H LF  LL  A + YG+  EG + +PC  
Sbjct: 79  VPRGHLAIYVGQKDGD-C--HRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLY 135

Query: 63  DDFLHLRWQI 72
            DF  ++ +I
Sbjct: 136 SDFERVKTRI 145