Miyakogusa Predicted Gene
- Lj4g3v1477220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1477220.1 Non Chatacterized Hit- tr|I3S7U1|I3S7U1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.15,0,no
description,NULL; NifU_N,NIF system FeS cluster assembly, NifU,
N-terminal; IRON-SULFUR CLUSTER A,CUFF.49325.1
(162 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G22220.1 | Symbols: ISU1, ATISU1 | SufE/NifU family protein |... 238 2e-63
AT4G04080.1 | Symbols: ISU3, ATISU3 | ISCU-like 3 | chr4:1963386... 228 2e-60
AT3G01020.1 | Symbols: ISU2, ATISU2 | ISCU-like 2 | chr3:5139-58... 206 4e-54
>AT4G22220.1 | Symbols: ISU1, ATISU1 | SufE/NifU family protein |
chr4:11759444-11760881 REVERSE LENGTH=167
Length = 167
Score = 238 bits (606), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/158 (74%), Positives = 128/158 (81%), Gaps = 6/158 (3%)
Query: 1 MLRVSAKRVFGTASQAIRVP-----ARFYHERVVDHYENPRNVGSFDKNAPTVVTGLVGA 55
ML+ +AK+ G S+ P R YHE V+DHY+NPRNVGSFDKN P V TGLVGA
Sbjct: 2 MLKQAAKKALGLTSRQ-STPWSVGILRTYHENVIDHYDNPRNVGSFDKNDPNVGTGLVGA 60
Query: 56 PACGDVMKLQIKIDDSTGKITDACFKTFGCGSAIASSSVATEWVKGKHMEEVLTIKNTEI 115
PACGDVMKLQIK+D+ TG+I DA FKTFGCGSAIASSSVATEWVKGK ME+VLTIKNTEI
Sbjct: 61 PACGDVMKLQIKVDEKTGQIVDARFKTFGCGSAIASSSVATEWVKGKAMEDVLTIKNTEI 120
Query: 116 AKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAMAGAA 153
AKHLSLPPVKLHCSMLAEDAIKAAVKDY+ KR A
Sbjct: 121 AKHLSLPPVKLHCSMLAEDAIKAAVKDYKEKRVKTNGA 158
>AT4G04080.1 | Symbols: ISU3, ATISU3 | ISCU-like 3 |
chr4:1963386-1964308 FORWARD LENGTH=171
Length = 171
Score = 228 bits (580), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/160 (71%), Positives = 128/160 (80%), Gaps = 5/160 (3%)
Query: 1 MLRVSAKRVF-GTASQ---AIRVPARFYHERVVDHYENPRNVGSFDKNAPTVVTGLVGAP 56
MLR + KR F G ASQ V +R YH V+DHY+NPRNVGSFDKN P V TGLVGAP
Sbjct: 1 MLRQTTKRAFLGLASQNPTPFPVVSRLYHPNVIDHYDNPRNVGSFDKNDPNVGTGLVGAP 60
Query: 57 ACGDVMKLQIKIDDSTGKITDACFKTFGCGSAIASSSVATEWVKGKHMEEVLTIKNTEIA 116
CGDVMKLQ+K D S G+I DA FKTFGCGSAIA+SSVATEWVKGK +EEVLTIKN++IA
Sbjct: 61 QCGDVMKLQVKFDGS-GQIIDAKFKTFGCGSAIAASSVATEWVKGKSVEEVLTIKNSQIA 119
Query: 117 KHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAMAGAATTE 156
KHLSLPPVKLHCSMLAEDAIKAA+K+Y+ K+ A T E
Sbjct: 120 KHLSLPPVKLHCSMLAEDAIKAAIKNYKEKQDKANGETVE 159
>AT3G01020.1 | Symbols: ISU2, ATISU2 | ISCU-like 2 | chr3:5139-5893
FORWARD LENGTH=163
Length = 163
Score = 206 bits (525), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/158 (65%), Positives = 129/158 (81%), Gaps = 2/158 (1%)
Query: 1 MLRVSAKRVF-GTASQAIRVPARFYHERVVDHYENPRNVGSFDKNAPTVVTGLVGAPACG 59
MLR ++++ + G + + + R YHE V+DH+ENPRNVGSF++N P V TGLVGAPACG
Sbjct: 3 MLRQTSRKAYLGLQASPLGLGRRLYHENVIDHFENPRNVGSFNRNDPNVGTGLVGAPACG 62
Query: 60 DVMKLQIKIDDSTGKITDACFKTFGCGSAIASSSVATEWVKGKHMEEVLTIKNTEIAKHL 119
D+M LQIK+DDS G+I D FKTFGCGSAIASSSVA+EW+KGK ++EV+TIKN EIAKHL
Sbjct: 63 DLMSLQIKVDDS-GQIIDTRFKTFGCGSAIASSSVASEWIKGKTLDEVMTIKNAEIAKHL 121
Query: 120 SLPPVKLHCSMLAEDAIKAAVKDYEAKRAMAGAATTEQ 157
LPPVKLHCSMLAEDAIK+AV+DY+ K+A AA E+
Sbjct: 122 RLPPVKLHCSMLAEDAIKSAVRDYKEKQAKTNAAAAEE 159