Miyakogusa Predicted Gene
- Lj4g3v0119590.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0119590.1 tr|B9HA38|B9HA38_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_802442 PE=4
SV=1,31.16,1e-17,TPR-like,NULL; PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; PPR: pen,gene.g51549.t1.1
(454 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 357 6e-99
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 345 5e-95
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 340 1e-93
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 5e-91
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 4e-90
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 4e-90
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 5e-88
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 321 5e-88
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 2e-86
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 314 9e-86
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 3e-85
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 4e-85
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 1e-84
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 310 1e-84
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 3e-84
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 4e-84
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 4e-83
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 304 1e-82
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 9e-82
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 8e-81
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 297 8e-81
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 5e-80
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 2e-79
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 3e-79
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 1e-78
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 4e-78
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 6e-78
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 8e-78
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 287 8e-78
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 3e-77
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 285 5e-77
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 9e-77
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 283 2e-76
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 3e-76
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 282 3e-76
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 5e-76
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 281 8e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 1e-75
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 280 2e-75
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 2e-75
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 4e-75
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 278 4e-75
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 278 5e-75
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 277 9e-75
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 277 1e-74
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 4e-74
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 7e-74
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 9e-74
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 9e-74
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 273 1e-73
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 271 6e-73
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 9e-73
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 269 3e-72
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 269 4e-72
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 2e-71
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 4e-71
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 265 5e-71
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 5e-71
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 5e-71
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 9e-71
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 9e-71
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 1e-70
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 2e-70
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 262 4e-70
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 8e-70
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 257 1e-68
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 2e-68
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 3e-67
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 4e-67
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 4e-67
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 5e-67
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 250 1e-66
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 5e-66
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 248 6e-66
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 246 2e-65
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 246 3e-65
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 5e-65
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 3e-64
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 5e-64
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 7e-64
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 8e-64
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 1e-63
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 237 1e-62
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 237 1e-62
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 2e-62
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 4e-62
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 1e-61
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 3e-61
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 232 5e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 232 5e-61
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 6e-61
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 226 3e-59
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 1e-58
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 7e-58
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 1e-57
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 5e-57
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 208 7e-54
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 189 4e-48
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 4e-47
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 6e-41
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 103 2e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 89 7e-18
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 87 3e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 9e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 1e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 84 2e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 4e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 78 1e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 6e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 75 7e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 8e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 8e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 9e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 73 5e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 72 6e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 71 1e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 70 4e-12
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 70 4e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 69 8e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 2e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 3e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 6e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 56 4e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 56 6e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 56 6e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 8e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 51 1e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/440 (43%), Positives = 277/440 (62%), Gaps = 5/440 (1%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGD-MNYAVSVFDRVDKP-DAFLWN 58
+ L++IHA + G + +GK ++F VS+P+ M+YA VF +++KP + F+WN
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89
Query: 59 TMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
T+IRG+ A Y+ M+ V PDT T+ FL+K V + V LG+ +H +
Sbjct: 90 TLIRGYAEIGNSISAFSLYREMRVS-GLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
+ G + +V+NSL+H+Y D+ +A+++F++M KDLVAWNS+I+ GK EAL
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
+T M G++PD T V LSAC +GAL G+ VH + + + S SN L+D+Y
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS-SNVLLDLY 267
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
A+CG VEEA +F M KN +SW ++I+GLA +G G EA+ LF M + P ITF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+G+L ACSH G V EG YF M +Y ++P ++H+GCMVDLL RAG V++AY IK+MP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
M+ N ++WR+LL AC HG+ LAE R +L+LEP HS DYVLL+NMYAS +W+++ K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 419 ERRSMQERGVKKPEPGNSFV 438
R+ M GVKK PG+S V
Sbjct: 448 IRKQMLRDGVKKV-PGHSLV 466
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/481 (40%), Positives = 284/481 (59%), Gaps = 38/481 (7%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
LK+IHAR+ +TG Q+ + K + FC S + + YA VFD D+PD FLWN MIRG
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 64 FGNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
F +++PE+++L Y+RM PH + +TF LLK L + Q+H KLG
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPH---NAYTFPSLLKACSNLSAFEETTQIHAQITKLGY 146
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYN-------- 174
EN + NSLI+ Y V + + AH LF+ + D V+WNS+I V GK +
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRK 206
Query: 175 -----------------------EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFG 211
EAL F M S + PD+ + LSAC +GAL G
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 212 RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLAS 271
+W+HS + + T + + + L+DMYAKCG +EEA E+F+++K K+V +W +I G A
Sbjct: 267 KWIHSYLNK-TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 272 HGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTV 331
HG+G EA++ F EM Q+ ++P+ ITF VL ACS+ G V+EG+ F M RDYN++PT+
Sbjct: 326 HGHGREAISKFMEM-QKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
+HYGC+VDLLGRAGL++EA I+ MP++ NA++W +LL ACR H N++L E++ + L+
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 444
Query: 392 LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLENETAE 451
++P H YV AN++A +W++ ++ RR M+E+GV K PG S + L G E +
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV-PGCSTISLEGTTHEFLAGD 503
Query: 452 R 452
R
Sbjct: 504 R 504
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 357 bits (917), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 183/476 (38%), Positives = 281/476 (59%), Gaps = 38/476 (7%)
Query: 2 NHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
N K+I+A I G Q+ +V K++ FC DM+YA +F++V P+ FL+N++I
Sbjct: 24 NEWKKINASIIIHGLSQSSFMVTKMVDFCD---KIEDMDYATRLFNQVSNPNVFLYNSII 80
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
R + + + + YK++ + + +PD FTF F+ K LGS LGKQ+H K G
Sbjct: 81 RAYTHNSLYCDVIRIYKQLLR-KSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGK--------- 172
H N+LI MY D+ AH++F+EM +D+++WNS++ G+
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 173 ----------------------YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAF 210
Y EA+DFF M +G+ PD+ + + L +C +G+L
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 211 GRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLA 270
G+W+H +R +L + T V N+L++MY+KCG + +A ++F M+GK+VISW+TMI G A
Sbjct: 260 GKWIHLYAERRGFLKQ-TGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT 330
HGN A+ F EM Q V+P+GITFLG+L ACSH G EG RYFD+M +DY ++P
Sbjct: 319 YHGNAHGAIETFNEM-QRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK 377
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
++HYGC++D+L RAG +E A + K MPM+ ++ +W SLL++CRT GN+ +A HL+
Sbjct: 378 IEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
Query: 391 ELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLE 446
ELEP +YVLLAN+YA G+W ++S+ R+ ++ +KK PG S + + I E
Sbjct: 438 ELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKT-PGGSLIEVNNIVQE 492
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 345 bits (884), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 183/463 (39%), Positives = 289/463 (62%), Gaps = 25/463 (5%)
Query: 1 MNHLKEIHARIYQTGFHQNH---LVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLW 57
M+ LK++HA +T + + + GKI+ +S D+NYA VFD ++ +F+W
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKIL---QLSSSFSDVNYAFRVFDSIENHSSFMW 117
Query: 58 NTMIRGFG-NTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHC 115
NT+IR + ++ E+A + Y++M ++GE PD TF F+LK + GKQ+HC
Sbjct: 118 NTLIRACAHDVSRKEEAFMLYRKMLERGESS--PDKHTFPFVLKACAYIFGFSEGKQVHC 175
Query: 116 STLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE 175
+K G +V N LIH+YG ++ A ++F+EM + LV+WNS+ID LV G+Y+
Sbjct: 176 QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS 235
Query: 176 ALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV--SNS 233
AL F R +Q PD T LSAC +G+L+ G W H+ + R + V NS
Sbjct: 236 ALQLF-REMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 294
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEML--QENVV 291
L++MY KCG++ A ++F+ M+ +++ SWN MILG A+HG EA+ F M+ +ENV
Sbjct: 295 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENV- 353
Query: 292 RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAY 351
RP+ +TF+G+L AC+H GFV++GR+YFD+M RDY ++P ++HYGC+VDL+ RAG + EA
Sbjct: 354 RPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAI 413
Query: 352 ILIKNMPMECNAIVWRSLLAACRTHG-NVKLAEKVRKHLLELEPCHSSD-------YVLL 403
++ +MPM+ +A++WRSLL AC G +V+L+E++ ++++ + + S YVLL
Sbjct: 414 DMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLL 473
Query: 404 ANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLE 446
+ +YAS +WN++ R+ M E G++K EPG S + + GI E
Sbjct: 474 SRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEINGISHE 515
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 279/486 (57%), Gaps = 43/486 (8%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
M LK+IHA + +TG + + +++ FC S DMNYA VF R++ + F+WNT+
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCAS--PSDMNYAYLVFTRINHKNPFVWNTI 95
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
IRGF ++ PE A+ + M P V P T+ + K G LG G+QLH +K
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 121 GVENHAHVRNSLIHMY---GVMKD----------------------------IETAHQLF 149
G+E+ + +RN+++HMY G + + I+ A LF
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 150 EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA 209
+EM ++ V+WNS+I V G++ +ALD F M + ++PD T V L+AC +GA
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
Query: 210 FGRWVHSCIQRATYLGEITS-VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
GRW+H I R + E+ S V +L+DMY KCG +EE +F K + WN+MILG
Sbjct: 276 QGRWIHEYIVRNRF--ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG 333
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
LA++G A+ LF+E L+ + + PD ++F+GVL AC+H G V +F +M Y ++
Sbjct: 334 LANNGFEERAMDLFSE-LERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKH 388
P++KHY MV++LG AGL+EEA LIKNMP+E + ++W SLL+ACR GNV++A++ K
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 389 LLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLENE 448
L +L+P + YVLL+N YAS G + E ++R M+ER ++K VG I ++ E
Sbjct: 453 LKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKE------VGCSSIEVDFE 506
Query: 449 TAERLS 454
E +S
Sbjct: 507 VHEFIS 512
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 331 bits (849), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 180/431 (41%), Positives = 260/431 (60%), Gaps = 9/431 (2%)
Query: 2 NHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
LK+IHA + +TGF + + ++ +++ V GDM YA VFD + KP FLWNT+
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVV---IGDMCYARQVFDEMHKPRIFLWNTLF 81
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
+G+ P +++L YK+M+ + V PD FT+ F++K + LG G LH +K G
Sbjct: 82 KGYVRNQLPFESLLLYKKMR--DLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG 139
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
V L+ MY ++ +A LFE M KDLVAWN+ + V G AL++F
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
+M ++ D T V LSACG +G+L G ++ ++ I V N+ +DM+ KC
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII-VENARLDMHLKC 258
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G E A +F MK +NV+SW+TMI+G A +G+ EALTLF M E + RP+ +TFLGV
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGL-RPNYVTFLGV 317
Query: 302 LCACSHGGFVDEGRRYFDIM--SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
L ACSH G V+EG+RYF +M S D N++P +HY CMVDLLGR+GL+EEAY IK MP+
Sbjct: 318 LSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKE 419
E + +W +LL AC H ++ L +KV L+E P S +VLL+N+YA+ G+W+ + K
Sbjct: 378 EPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKV 437
Query: 420 RRSMQERGVKK 430
R M++ G KK
Sbjct: 438 RSKMRKLGTKK 448
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 328 bits (842), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 188/496 (37%), Positives = 274/496 (55%), Gaps = 75/496 (15%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
LK+IHA + G N VVG++I ++SVP G + YA +FD + KPD + N ++RG
Sbjct: 28 LKQIHASMVVNGLMSNLSVVGELIYSASLSVP-GALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ +PEK V Y M++ V PD +TF+F+LK L G H ++ G
Sbjct: 87 SAQSMKPEKTVSLYTEMEK--RGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 124 NHAHVRNSLIHM-------------------------------YGVMKDIETAHQLFEEM 152
+ +V+N+LI Y I+ A +LF+EM
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 153 LNKDLVAWNSIID-CLVC------------------------------CGKYNEALDFFT 181
KD VAWN +I CL C CG EAL F
Sbjct: 205 PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFK 264
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH------SCIQRATYLGEITSVSNSLV 235
M +G PD T + LSAC +G L G+ +H + + + Y+G T + N+L+
Sbjct: 265 EMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVG--TPIWNALI 322
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDG 295
DMYAKCG+++ A E+FR +K +++ +WNT+I+GLA H + ++ +F EM Q V P+
Sbjct: 323 DMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEM-QRLKVWPNE 380
Query: 296 ITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIK 355
+TF+GV+ ACSH G VDEGR+YF +M YN++P +KHYGCMVD+LGRAG +EEA++ ++
Sbjct: 381 VTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVE 440
Query: 356 NMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNE 415
+M +E NAIVWR+LL AC+ +GNV+L + + LL + S DYVLL+N+YASTGQW+
Sbjct: 441 SMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDG 500
Query: 416 MSKERRSMQERGVKKP 431
+ K R+ + VKKP
Sbjct: 501 VQKVRKMFDDTRVKKP 516
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 328 bits (842), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 262/434 (60%), Gaps = 11/434 (2%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ HL +IH +I+ + + ++ +++ ++S+ A D+ +A ++ WN +
Sbjct: 26 IKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSL-AKDLAFARTLLLHSSDSTPSTWNML 84
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
RG+ +++ P +++ Y M++ + P+ TF FLLK + G+Q+ LK
Sbjct: 85 SRGYSSSDSPVESIWVYSEMKR--RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKH 142
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
G + +V N+LIH+YG K A ++F+EM +++V+WNSI+ LV GK N + F
Sbjct: 143 GFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF 202
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ-RATYLGEITSVSNSLVDMYA 239
M+ PD+ T VV LSACG G L+ G+ VHS + R L + +LVDMYA
Sbjct: 203 CEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELN--CRLGTALVDMYA 258
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
K G +E A +F M KNV +W+ MI+GLA +G EAL LF++M++E+ VRP+ +TFL
Sbjct: 259 KSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFL 318
Query: 300 GVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
GVLCACSH G VD+G +YF M + + ++P + HYG MVD+LGRAG + EAY IK MP
Sbjct: 319 GVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPF 378
Query: 360 ECNAIVWRSLLAACRTHGNVK---LAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEM 416
E +A+VWR+LL+AC H + + EKV+K L+ELEP S + V++AN +A W E
Sbjct: 379 EPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEA 438
Query: 417 SKERRSMQERGVKK 430
++ RR M+E +KK
Sbjct: 439 AEVRRVMKETKMKK 452
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 322 bits (824), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 268/471 (56%), Gaps = 38/471 (8%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
+N +K+IH + + G Q+ ++ K+I + VP YA V + V + FLW
Sbjct: 62 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDP--YARRVIEPVQFRNPFLWTA 119
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+IRG+ + ++A+ Y M++ E + P +FTFS LLK G + + LG+Q H T +
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEE--ITPVSFTFSALLKACGTMKDLNLGRQFHAQTFR 177
Query: 120 LGVENHAHVRNSLIHMY-------------------------------GVMKDIETAHQL 148
L +V N++I MY + ++E A +L
Sbjct: 178 LRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAEL 237
Query: 149 FEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL 208
FE + KD+VAW +++ K EAL++F RM +SG+R D+ T +SAC +GA
Sbjct: 238 FESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGAS 297
Query: 209 AFGRWVHSCIQRATYL-GEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMIL 267
+ Q++ Y + + ++L+DMY+KCG VEEA +F SM KNV ++++MIL
Sbjct: 298 KYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMIL 357
Query: 268 GLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNV 327
GLA+HG EAL LF M+ + ++P+ +TF+G L ACSH G VD+GR+ FD M + + V
Sbjct: 358 GLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGV 417
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRK 387
QPT HY CMVDLLGR G ++EA LIK M +E + VW +LL ACR H N ++AE +
Sbjct: 418 QPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAE 477
Query: 388 HLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
HL ELEP +Y+LL+N+YAS G W + + R+ ++E+G+KK P S+V
Sbjct: 478 HLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKK-TPAVSWV 527
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 321 bits (823), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 258/411 (62%), Gaps = 7/411 (1%)
Query: 23 VGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN-TNQPEKAVLFYKRMQ 81
V K+I FC S M+YA +F+ + +PD ++N+M RG+ TN E LF + ++
Sbjct: 63 VAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE 122
Query: 82 QGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKD 141
G ++PD +TF LLK ++ G+QLHC ++KLG++++ +V +LI+MY +D
Sbjct: 123 DG---ILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECED 179
Query: 142 IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA 201
+++A +F+ ++ +V +N++I + NEAL F M ++P++ T + LS+
Sbjct: 180 VDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSS 239
Query: 202 CGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVIS 261
C +G+L G+W+H ++ ++ + V+ +L+DM+AKCG++++A IF M+ K+ +
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSFCKYV-KVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA 298
Query: 262 WNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIM 321
W+ MI+ A+HG +++ +F M ENV +PD ITFLG+L ACSH G V+EGR+YF M
Sbjct: 299 WSAMIVAYANHGKAEKSMLMFERMRSENV-QPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 322 SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKL 381
+ + P++KHYG MVDLL RAG +E+AY I +P+ ++WR LLAAC +H N+ L
Sbjct: 358 VSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDL 417
Query: 382 AEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQER-GVKKP 431
AEKV + + EL+ H DYV+L+N+YA +W + R+ M++R VK P
Sbjct: 418 AEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVP 468
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 273/487 (56%), Gaps = 49/487 (10%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
LK+ H + TG ++++L V K I C+ AG + YA SVF P+ +L NTMIR
Sbjct: 31 LKQSHCYMIITGLNRDNLNVAKFIEACS---NAGHLRYAYSVFTHQPCPNTYLHNTMIRA 87
Query: 64 FGNTNQPEK---AVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
++P A+ Y+++ PDTFTF F+LKI + V G+Q+H +
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWA--LCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWN----------------SII 164
G ++ HV LI MY + A ++F+EML KD+ WN S++
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 205
Query: 165 DCLVC-----------------CGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
+ + C G+ +EA++ F RM+ + PD+ T + LSAC +G+
Sbjct: 206 EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGS 265
Query: 208 LAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMIL 267
L G + S + + S++N+++DMYAK G + +A ++F + +NV++W T+I
Sbjct: 266 LELGERICSYVDHRG-MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 268 GLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNV 327
GLA+HG+G EAL +F M++ V RP+ +TF+ +L ACSH G+VD G+R F+ M Y +
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGV-RPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRK 387
P ++HYGCM+DLLGRAG + EA +IK+MP + NA +W SLLAA H +++L E+
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALS 443
Query: 388 HLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLEN 447
L++LEP +S +Y+LLAN+Y++ G+W+E R M+ GVKK G I +EN
Sbjct: 444 ELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKK------MAGESSIEVEN 497
Query: 448 ETAERLS 454
+ +S
Sbjct: 498 RVYKFIS 504
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 314 bits (804), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 270/468 (57%), Gaps = 45/468 (9%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
H+ IHA+I +T Q+ VV ++I C+ ++YA VF V P+ +L+ MI
Sbjct: 44 HVPSIHAKIIRTFHDQDAFVVFELIRVCST---LDSVDYAYDVFSYVSNPNVYLYTAMID 100
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
GF ++ + V Y RM V+PD + + +LK + + +++H LKLG
Sbjct: 101 GFVSSGRSADGVSLYHRMIHNS--VLPDNYVITSVLKAC----DLKVCREIHAQVLKLGF 154
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVA----------------------- 159
+ V ++ +YG ++ A ++F+EM ++D VA
Sbjct: 155 GSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQD 214
Query: 160 --------WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFG 211
W ++ID LV + N+AL+ F M + ++ T V LSAC +GAL G
Sbjct: 215 VKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELG 274
Query: 212 RWVHSCIQRATYLGEITS-VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLA 270
RWVHS ++ E+++ V N+L++MY++CG + EA +FR M+ K+VIS+NTMI GLA
Sbjct: 275 RWVHSFVENQRM--ELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLA 332
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT 330
HG EA+ F +M+ RP+ +T + +L ACSHGG +D G F+ M R +NV+P
Sbjct: 333 MHGASVEAINEFRDMVNRGF-RPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQ 391
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
++HYGC+VDLLGR G +EEAY I+N+P+E + I+ +LL+AC+ HGN++L EK+ K L
Sbjct: 392 IEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLF 451
Query: 391 ELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
E E S YVLL+N+YAS+G+W E ++ R SM++ G++K EPG S +
Sbjct: 452 ESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK-EPGCSTI 498
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 142/322 (44%), Gaps = 38/322 (11%)
Query: 89 PDTFTFSF-----LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIE 143
PD+ T L+ ++ ++ +H ++ + A V LI + + ++
Sbjct: 19 PDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD 78
Query: 144 TAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSAC- 202
A+ +F + N ++ + ++ID V G+ + + + RM+ + + PD+ L AC
Sbjct: 79 YAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD 138
Query: 203 --------GAMGALAFGRWVHSCIQRATYLGEITSVSNS-----------------LVDM 237
+ L FG ++ G+ + N+ +++
Sbjct: 139 LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
Y++CG ++EA E+F+ +K K+ + W MI GL + +AL LF EM EN V + T
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN-VSANEFT 257
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY--GCMVDLLGRAGLVEEAYILIK 355
+ VL ACS G ++ GR + N + + ++ ++++ R G + EA + +
Sbjct: 258 AVCVLSACSDLGALELGRWVHSFVE---NQRMELSNFVGNALINMYSRCGDINEARRVFR 314
Query: 356 NMPMECNAIVWRSLLAACRTHG 377
M + + I + ++++ HG
Sbjct: 315 VM-RDKDVISYNTMISGLAMHG 335
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 268/445 (60%), Gaps = 9/445 (2%)
Query: 1 MNHLKEIHAR-IYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
++ K++HAR I + F+ + ++ CA S MNYA S+F +D P F +NT
Sbjct: 43 IDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNT 102
Query: 60 MIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
MIRG+ N E+A+ FY M Q+G PD FT+ LLK L S+ GKQ+H
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNE---PDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
KLG+E V+NSLI+MYG ++E + +FE++ +K +W+S++ G ++E L
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 179 FFTRMV-QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
F M ++ ++ +++ V L AC GAL G +H + R I V SLVDM
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII-VQTSLVDM 278
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
Y KCG +++A IF+ M+ +N ++++ MI GLA HG G AL +F++M++E + PD +
Sbjct: 279 YVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL-EPDHVV 337
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
++ VL ACSH G V EGRR F M ++ V+PT +HYGC+VDLLGRAGL+EEA I+++
Sbjct: 338 YVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSI 397
Query: 358 PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMS 417
P+E N ++WR+ L+ CR N++L + + LL+L + DY+L++N+Y+ W++++
Sbjct: 398 PIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVA 457
Query: 418 KERRSMQERGVKKPEPGNSFVGLPG 442
+ R + +G+K+ PG S V L G
Sbjct: 458 RTRTEIAIKGLKQT-PGFSIVELKG 481
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 312 bits (799), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 279/492 (56%), Gaps = 71/492 (14%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
L +IH + G + GK+I+ CA+S+ + + YA + +PDAF++NT++RG
Sbjct: 21 LTQIHGLFIKYGVDTDSYFTGKLILHCAISI-SDALPYARRLLLCFPEPDAFMFNTLVRG 79
Query: 64 FGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIV--------------------- 101
+ +++P +V +F + M++G V PD+F+F+F++K V
Sbjct: 80 YSESDEPHNSVAVFVEMMRKG--FVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 102 --------------GGLGSVVLGK----QLHCSTL------------------------K 119
GG G V + ++H L K
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
+ V NH N ++ Y ++E+A ++F EM ++D V+W+++I + G +NE+ +
Sbjct: 198 MLVRNHTS-WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLY 256
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
F + ++GM P++ + LSAC G+ FG+ +H +++A Y I SV+N+L+DMY+
Sbjct: 257 FRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY-SWIVSVNNALIDMYS 315
Query: 240 KCGAVEEAYEIFRSMKGKN-VISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
+CG V A +F M+ K ++SW +MI GLA HG G EA+ LF EM V PDGI+F
Sbjct: 316 RCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT-PDGISF 374
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+ +L ACSH G ++EG YF M R Y+++P ++HYGCMVDL GR+G +++AY I MP
Sbjct: 375 ISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP 434
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
+ AIVWR+LL AC +HGN++LAE+V++ L EL+P +S D VLL+N YA+ G+W +++
Sbjct: 435 IPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVAS 494
Query: 419 ERRSMQERGVKK 430
R+SM + +KK
Sbjct: 495 IRKSMIVQRIKK 506
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 310 bits (794), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 270/470 (57%), Gaps = 35/470 (7%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
+++IHA++Y G ++ +VG + A+S ++YA + DR +KP F N+MIR
Sbjct: 22 VRQIHAKLYVDGTLKDDHLVGHFVKAVALS-DHKYLDYANQILDRSEKPTLFALNSMIRA 80
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ PEK+ FY+R+ + PD +T +FL++ GL G Q+H T++ G +
Sbjct: 81 HCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFD 140
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQ-------------------------------LFEEM 152
N HV+ LI +Y + +++ H+ LFE M
Sbjct: 141 NDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGM 200
Query: 153 LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGR 212
+D +AWN++I G+ EAL+ F M G++ + + LSAC +GAL GR
Sbjct: 201 PERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGR 260
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
W HS I+R + ++ +LVD+YAKCG +E+A E+F M+ KNV +W++ + GLA +
Sbjct: 261 WAHSYIER-NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
G G + L LF+ M Q+ V P+ +TF+ VL CS GFVDEG+R+FD M ++ ++P ++
Sbjct: 320 GFGEKCLELFSLMKQDGVT-PNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLE 378
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
HYGC+VDL RAG +E+A +I+ MPM+ +A VW SLL A R + N++L K +LEL
Sbjct: 379 HYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLEL 438
Query: 393 EPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
E + YVLL+N+YA + W+ +S R+SM+ +GV+K +PG S + + G
Sbjct: 439 ETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRK-QPGCSVMEVNG 487
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 310 bits (794), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 275/497 (55%), Gaps = 64/497 (12%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVS-VPAGDMNYAVSVFDRVDKPDAFLWNT 59
+ L +IHA ++G ++ L +I+ FCA S + D++YA +F+++ + + F WNT
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 60 MIRGFGNTNQPEKAV---LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
+IRGF +++ + + LFY+ M + V P+ FTF +LK G + GKQ+H
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMS--DEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 153
Query: 117 TLKLGVENHAHVRNSLIHMY---GVMKDI------------------------------- 142
LK G V ++L+ MY G MKD
Sbjct: 154 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNV 213
Query: 143 -----------ETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPD 191
+ A LF++M + +V+WN++I G + +A++ F M + +RP+
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 192 DATFVVTLSACGAMGALAFGRWVH-----SCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
T V L A +G+L G W+H S I+ LG ++L+DMY+KCG +E+
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG------SALIDMYSKCGIIEK 327
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
A +F + +NVI+W+ MI G A HG +A+ F +M Q V RP + ++ +L ACS
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV-RPSDVAYINLLTACS 386
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVW 366
HGG V+EGRRYF M ++P ++HYGCMVDLLGR+GL++EA I NMP++ + ++W
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 446
Query: 367 RSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQER 426
++LL ACR GNV++ ++V L+++ P S YV L+NMYAS G W+E+S+ R M+E+
Sbjct: 447 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 427 GVKKPEPGNSFVGLPGI 443
++K +PG S + + G+
Sbjct: 507 DIRK-DPGCSLIDIDGV 522
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 309 bits (791), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 258/441 (58%), Gaps = 10/441 (2%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK-PDAFLWNT 59
M L++IH+ + G + + ++ FCAVSV G +++A +FD D P WN
Sbjct: 18 MKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSV-TGSLSHAQLLFDHFDSDPSTSDWNY 76
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+IRGF N++ P ++LFY RM PD FTF+F LK + S+ ++H S ++
Sbjct: 77 LIRGFSNSSSPLNSILFYNRMLLSSVSR-PDLFTFNFALKSCERIKSIPKCLEIHGSVIR 135
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G + A V SL+ Y +E A ++F+EM +DLV+WN +I C G +N+AL
Sbjct: 136 SGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSM 195
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH--SCIQRATYLGEITSVSNSLVDM 237
+ RM G+ D T V LS+C + AL G +H +C R VSN+L+DM
Sbjct: 196 YKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCE---SCVFVSNALIDM 252
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
YAKCG++E A +F M+ ++V++WN+MI+G HG+G EA++ F +M+ V RP+ IT
Sbjct: 253 YAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV-RPNAIT 311
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
FLG+L CSH G V EG +F+IMS +++ P VKHYGCMVDL GRAG +E + +I
Sbjct: 312 FLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYAS 371
Query: 358 PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMS 417
+ ++WR+LL +C+ H N++L E K L++LE ++ DYVL+ ++Y++ +
Sbjct: 372 SCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFA 431
Query: 418 KERRSMQERGVKKPEPGNSFV 438
R+ ++ ++ PG S++
Sbjct: 432 SMRKLIRSHDLQTV-PGWSWI 451
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 134/286 (46%), Gaps = 8/286 (2%)
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAH-QLFEEMLNK 155
+++++ G S+ +++H + G+++H + N L+ V +H QL + +
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 156 DLVA--WNSIIDCLVCCGKYNEALDFFTRMVQSGM-RPDDATFVVTLSACGAMGALAFGR 212
D WN +I ++ F+ RM+ S + RPD TF L +C + ++
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
+H + R+ +L + V+ SLV Y+ G+VE A ++F M ++++SWN MI +
Sbjct: 128 EIHGSVIRSGFLDDAI-VATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV 186
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
G +AL+++ M E V D T + +L +C+H ++ G I D + V
Sbjct: 187 GLHNQALSMYKRMGNEGVC-GDSYTLVALLSSCAHVSALNMGVMLHRIAC-DIRCESCVF 244
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN 378
++D+ + G +E A + M + + W S++ HG+
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKR-DVLTWNSMIIGYGVHGH 289
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 218/335 (65%), Gaps = 2/335 (0%)
Query: 104 LGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSI 163
+ V LG+ +H ++ G + +V+NSL+H+Y D+ +A+++F++M KDLVAWNS+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 164 IDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY 223
I+ GK EAL +T M G++PD T V LSAC +GAL G+ VH + +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 224 LGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
+ S SN L+D+YA+CG VEEA +F M KN +SW ++I+GLA +G G EA+ LF
Sbjct: 121 TRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 284 EMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
M + P ITF+G+L ACSH G V EG YF M +Y ++P ++H+GCMVDLL R
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 344 AGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLL 403
AG V++AY IK+MPM+ N ++WR+LL AC HG+ LAE R +L+LEP HS DYVLL
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLL 299
Query: 404 ANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
+NMYAS +W+++ K R+ M GVKK PG+S V
Sbjct: 300 SNMYASEQRWSDVQKIRKQMLRDGVKKV-PGHSLV 333
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 142/283 (50%), Gaps = 7/283 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
IH+ + ++GF V ++ A GD+ A VFD++ + D WN++I GF
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYA---NCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
+PE+A+ Y M + PD FT LL +G++ LGK++H +K+G+ +
Sbjct: 67 NGKPEEALALYTEMNS--KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
H N L+ +Y +E A LF+EM++K+ V+W S+I L G EA++ F M +
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 187 -GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
G+ P + TFV L AC G + G ++ + +VD+ A+ G V+
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 246 EAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEMLQ 287
+AYE +SM + NV+ W T++ HG+ A ++LQ
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 287
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/478 (37%), Positives = 271/478 (56%), Gaps = 41/478 (8%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
M+ L +IH + G + V + + F A+S +GD++YA ++ P + WN +
Sbjct: 21 MSELYKIHTLLITLGLSEEEPFVSQTLSFSALS-SSGDVDYAYKFLSKLSDPPNYGWNFV 79
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
IRGF N+ PEK++ Y +M + ++PD T+ FL+K L + LG LHCS +K
Sbjct: 80 IRGFSNSRNPEKSISVYIQMLRFG--LLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSI----------------- 163
G+E + N+LIHMYG +D +A +LF+EM +K+LV WNSI
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVF 197
Query: 164 --------------IDCLVCCGKYNEALDFFTRMVQSGM-RPDDATFVVTLSACGAMGAL 208
ID V G+YN+AL+ F +M++ G + ++ T V + AC +GAL
Sbjct: 198 DEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGAL 257
Query: 209 AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIF--RSMKGKNVISWNTMI 266
G+ VH I +L + SL+DMYAKCG++ +A+ +F S+K + + WN +I
Sbjct: 258 NRGKTVHRYILD-VHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAII 316
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYN 326
GLASHG E+L LF +M +E+ + PD ITFL +L ACSHGG V E +F + ++
Sbjct: 317 GGLASHGFIRESLQLFHKM-RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESG 374
Query: 327 VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVR 386
+P +HY CMVD+L RAGLV++A+ I MP++ + +LL C HGN++LAE V
Sbjct: 375 AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVG 434
Query: 387 KHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIR 444
K L+EL+P + YV LAN+YA Q+ R +M+++GVKK G+S + L G R
Sbjct: 435 KKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKI-AGHSILDLDGTR 491
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/408 (39%), Positives = 249/408 (61%), Gaps = 5/408 (1%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G + A +FD + D WN MI G+ T ++A+ +K M + +V PD T
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK--TNVRPDESTMVT 271
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
++ GS+ LG+Q+H G ++ + N+LI +Y ++ETA LFE + KD
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
+++WN++I Y EAL F M++SG P+D T + L AC +GA+ GRW+H
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 217 CI-QRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
I +R + +S+ SL+DMYAKCG +E A+++F S+ K++ SWN MI G A HG
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
+ LF+ M ++ ++PD ITF+G+L ACSH G +D GR F M++DY + P ++HYG
Sbjct: 452 DASFDLFSRM-RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPC 395
CM+DLLG +GL +EA +I M ME + ++W SLL AC+ HGNV+L E ++L+++EP
Sbjct: 511 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 570
Query: 396 HSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGI 443
+ YVLL+N+YAS G+WNE++K R + ++G+KK PG S + + +
Sbjct: 571 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-VPGCSSIEIDSV 617
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 216/423 (51%), Gaps = 41/423 (9%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ L+ IHA++ + G H + + K+I FC +S + YA+SVF + +P+ +WNTM
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
RG ++ P A+ Y M ++P+++TF F+LK + G+Q+H LKL
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLG--LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 121 GVENHAHVRNSLIHMY---GVMKD----------------------------IETAHQLF 149
G + +V SLI MY G ++D IE A +LF
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 150 EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA 209
+E+ KD+V+WN++I G Y EAL+ F M+++ +RPD++T V +SAC G++
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 210 FGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGL 269
GR VH I + G + N+L+D+Y+KCG +E A +F + K+VISWNT+I G
Sbjct: 284 LGRQVHLWIDDHGF-GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQ 328
EAL LF EML+ P+ +T L +L AC+H G +D GR + I R V
Sbjct: 343 THMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG----NVKLAEK 384
++D+ + G +E A+ + ++ + + W +++ HG + L +
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSR 460
Query: 385 VRK 387
+RK
Sbjct: 461 MRK 463
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 300 bits (769), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 249/458 (54%), Gaps = 36/458 (7%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
L EIHA + + H ++L++ I C + +YA VF + P+ ++N MI+
Sbjct: 20 LPEIHAHLLRHFLHGSNLLLAHFISICG---SLSNSDYANRVFSHIQNPNVLVFNAMIKC 76
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ P +++ F+ M+ + D +T++ LLK L + GK +H ++ G
Sbjct: 77 YSLVGPPLESLSFFSSMKS--RGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFH 134
Query: 124 NHAHVRNSLIHMY---GVMKD----------------------------IETAHQLFEEM 152
+R ++ +Y G M D +E LF++M
Sbjct: 135 RLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM 194
Query: 153 LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGR 212
+ +V+WNS+I L CG+ EAL+ F M+ G PD+AT V L ++G L G+
Sbjct: 195 SERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGK 254
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
W+HS + + + +V N+LVD Y K G +E A IFR M+ +NV+SWNT+I G A +
Sbjct: 255 WIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVN 314
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
G G + LF M++E V P+ TFLGVL CS+ G V+ G F +M + ++ +
Sbjct: 315 GKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTE 374
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
HYG MVDL+ R+G + EA+ +KNMP+ NA +W SLL+ACR+HG+VKLAE L+++
Sbjct: 375 HYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKI 434
Query: 393 EPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKK 430
EP +S +YVLL+N+YA G+W ++ K R M++ ++K
Sbjct: 435 EPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRK 472
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 32/311 (10%)
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
LL+++ G + ++H L+ + + I + G + + + A+++F + N +
Sbjct: 7 LLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPN 66
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
++ +N++I C G E+L FF+ M G+ D+ T+ L +C ++ L FG+ VH
Sbjct: 67 VLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHG 126
Query: 217 CIQRATY--LGEI----------------------------TSVSNSLVDMYAKCGAVEE 246
+ R + LG+I V N ++ + G VE
Sbjct: 127 ELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVER 186
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
+F+ M ++++SWN+MI L+ G EAL LF EM+ + PD T + VL +
Sbjct: 187 GLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG-FDPDEATVVTVLPISA 245
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVW 366
G +D G+ + + +VD ++G +E A + + M N + W
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR-NVVSW 304
Query: 367 RSLLAACRTHG 377
+L++ +G
Sbjct: 305 NTLISGSAVNG 315
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 264/449 (58%), Gaps = 8/449 (1%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIV-FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
+ +K H+ G H+N + K++ F + +YA S+FD ++ P++F+++T
Sbjct: 24 VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDT 83
Query: 60 MIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
MIR ++QP + ++ M ++ E + P TF FL+ +GKQ+HC +
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 119 KLGV-ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEAL 177
K GV + +HV+ ++ +Y K + A ++F+E+ D+V W+ +++ V CG +E L
Sbjct: 144 KNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 178 DFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
+ F M+ G+ PD+ + L+AC +GALA G+W+H +++ +++ V +LVDM
Sbjct: 204 EVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDM 263
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
YAKCG +E A E+F+ + +NV SW +I G A++G +A+T + +E+ ++PD +
Sbjct: 264 YAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVV 323
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
LGVL AC+HGGF++EGR + M Y + P +HY C+VDL+ RAG +++A LI+ M
Sbjct: 324 LLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKM 383
Query: 358 PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD----YVLLANMYASTGQW 413
PM+ A VW +LL CRTH NV+L E K+LL+LE + + V L+N+Y S +
Sbjct: 384 PMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443
Query: 414 NEMSKERRSMQERGVKKPEPGNSFVGLPG 442
E SK R +++RGV+K PG S + + G
Sbjct: 444 PEASKVRGMIEQRGVRKT-PGWSVLEVDG 471
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 298 bits (762), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 264/444 (59%), Gaps = 8/444 (1%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
HL++IHA + +T +N V + A+S+ D+NY+ VF + P NTMIR
Sbjct: 26 HLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIR 85
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
F + P + ++ +++ + + + SF LK G ++ G Q+H G
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSS-LPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGF 144
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ + + +L+ +Y ++ A ++F+E+ +D V+WN + C + + + L F +
Sbjct: 145 LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDK 204
Query: 183 M---VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
M V ++PD T ++ L AC +GAL FG+ VH I G + ++SN+LV MY+
Sbjct: 205 MKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGAL-NLSNTLVSMYS 263
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
+CG++++AY++F M+ +NV+SW +I GLA +G G EA+ F EML+ + P+ T
Sbjct: 264 RCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGI-SPEEQTLT 322
Query: 300 GVLCACSHGGFVDEGRRYFDIM-SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
G+L ACSH G V EG +FD M S ++ ++P + HYGC+VDLLGRA L+++AY LIK+M
Sbjct: 323 GLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME 382
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
M+ ++ +WR+LL ACR HG+V+L E+V HL+EL+ + DYVLL N Y++ G+W ++++
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTE 442
Query: 419 ERRSMQERGVKKPEPGNSFVGLPG 442
R M+E+ + +PG S + L G
Sbjct: 443 LRSLMKEKRI-HTKPGCSAIELQG 465
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 297 bits (761), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 238/441 (53%), Gaps = 36/441 (8%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
GDM A VFD D WN +I G+ + EKA+ YK M+ V PD T
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES--EGVKPDDVTMIG 262
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDI-------------- 142
L+ LG + GK+ + + G+ + N+L+ M+ DI
Sbjct: 263 LVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 322
Query: 143 -----------------ETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
+ + +LF++M KD+V WN++I V + +AL F M
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
S +PD+ T + LSAC +GAL G W+H I++ + L ++ SLVDMYAKCG +
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS-LSLNVALGTSLVDMYAKCGNIS 441
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
EA +F ++ +N +++ +I GLA HG+ + A++ F EM+ + PD ITF+G+L AC
Sbjct: 442 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA-PDEITFIGLLSAC 500
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
HGG + GR YF M +N+ P +KHY MVDLLGRAGL+EEA L+++MPME +A V
Sbjct: 501 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 560
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
W +LL CR HGNV+L EK K LLEL+P S YVLL MY W + + RR M E
Sbjct: 561 WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNE 620
Query: 426 RGVKKPEPGNSFVGLPGIRLE 446
RGV+K PG S + + GI E
Sbjct: 621 RGVEKI-PGCSSIEVNGIVCE 640
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 203/415 (48%), Gaps = 43/415 (10%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
HLK+I A++ G + ++I FCA+S + ++Y+V + ++ P+ F WN IR
Sbjct: 68 HLKQIQAQMIINGLILDPFASSRLIAFCALS-ESRYLDYSVKILKGIENPNIFSWNVTIR 126
Query: 63 GFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
GF + P+++ L YK+M + G PD FT+ L K+ L LG + LKL
Sbjct: 127 GFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLR 186
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+E +HV N+ IHM+ D+E A ++F+E +DLV+WN +I+ G+ +A+ +
Sbjct: 187 LELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
M G++PDD T + +S+C +G L G+ + ++ I V N+L+DM++KC
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV-NALMDMFSKC 305
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHG---------------------------- 273
G + EA IF +++ + ++SW TMI G A G
Sbjct: 306 GDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSV 365
Query: 274 ---NGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEG---RRYFDIMSRDYNV 327
G +AL LF EM N +PD IT + L ACS G +D G RY + S NV
Sbjct: 366 QAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
+VD+ + G + EA + + N++ + +++ HG+ A
Sbjct: 425 ALGTS----LVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTA 474
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 120/242 (49%), Gaps = 7/242 (2%)
Query: 147 QLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSG---MRPDDATFVVTLSACG 203
++ + + N ++ +WN I E+ + +M++ G RPD T+ V C
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 204 AMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWN 263
+ + G + + + L ++ V N+ + M+A CG +E A ++F ++++SWN
Sbjct: 168 DLRLSSLGHMILGHVLKLR-LELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 226
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
+I G G +A+ ++ M E V+PD +T +G++ +CS G ++ G+ +++ + +
Sbjct: 227 CLINGYKKIGEAEKAIYVYKLMESEG-VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV-K 284
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAE 383
+ ++ T+ ++D+ + G + EA + N+ + W ++++ G + ++
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR-TIVSWTTMISGYARCGLLDVSR 343
Query: 384 KV 385
K+
Sbjct: 344 KL 345
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 258/450 (57%), Gaps = 47/450 (10%)
Query: 36 AGDMNYAVSVFD-RVDKPDAFLWNTMIRGF-GNTNQPEK--AVLFYKRMQQGEPHVVPDT 91
A + YA +F R K ++FLWN +IR N + P++ + Y RM+ V PD
Sbjct: 5 AAIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHR--VSPDF 62
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE 151
TF FLL + LG++ H L G++ VR SL++MY D+ +A ++F++
Sbjct: 63 HTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDD 122
Query: 152 MLNKDLVAWNSIID---------------------------CL----VCCGKYNEALDFF 180
+KDL AWNS+++ CL V CGKY EALD F
Sbjct: 123 SGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLF 182
Query: 181 TRMV-----QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV-SNSL 234
M ++ +RP++ T LSACG +GAL G+WVH+ I + Y EI V +L
Sbjct: 183 REMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK--YHVEIDIVLGTAL 240
Query: 235 VDMYAKCGAVEEAYEIFRSM-KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRP 293
+DMYAKCG++E A +F ++ K+V +++ MI LA +G E LF+EM + + P
Sbjct: 241 IDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINP 300
Query: 294 DGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYIL 353
+ +TF+G+L AC H G ++EG+ YF +M ++ + P+++HYGCMVDL GR+GL++EA
Sbjct: 301 NSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESF 360
Query: 354 IKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQW 413
I +MPME + ++W SLL+ R G++K E K L+EL+P +S YVLL+N+YA TG+W
Sbjct: 361 IASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRW 420
Query: 414 NEMSKERRSMQERGVKKPEPGNSFVGLPGI 443
E+ R M+ +G+ K PG S+V + G+
Sbjct: 421 MEVKCIRHEMEVKGINKV-PGCSYVEVEGV 449
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 295 bits (754), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 258/473 (54%), Gaps = 39/473 (8%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K++H + + G N V ++ ++ G M+ A VFDR K D F WN MI G+
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSL---CGLMDMARGVFDRRCKEDVFSWNLMISGY 211
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ E+++ M++ V P + T +L + L K++H + E
Sbjct: 212 NRMKEYEESIELLVEMERN--LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSI--------------------- 163
+ N+L++ Y +++ A ++F M +D+++W SI
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 164 ----------IDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
ID + G +NE+L+ F M +GM PD+ T V L+AC +G+L G W
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG 273
+ + I + ++ V N+L+DMY KCG E+A ++F M ++ +W M++GLA++G
Sbjct: 390 IKTYIDKNKIKNDVV-VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 274 NGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKH 333
G EA+ +F +M Q+ ++PD IT+LGVL AC+H G VD+ R++F M D+ ++P++ H
Sbjct: 449 QGQEAIKVFFQM-QDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 334 YGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELE 393
YGCMVD+LGRAGLV+EAY +++ MPM N+IVW +LL A R H + +AE K +LELE
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE 567
Query: 394 PCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLE 446
P + + Y LL N+YA +W ++ + RR + + +KK PG S + + G E
Sbjct: 568 PDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKT-PGFSLIEVNGFAHE 619
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 198/419 (47%), Gaps = 45/419 (10%)
Query: 2 NHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
+ K++H++ G N K+ VF S G ++YA +F ++ +PD +WN MI
Sbjct: 48 DQFKQLHSQSITRGVAPNPTFQKKLFVFWC-SRLGGHVSYAYKLFVKIPEPDVVVWNNMI 106
Query: 62 RGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGL----GSVVLGKQLHCS 116
+G+ + + V Y M ++G V PD+ TF FLL GL G++ GK+LHC
Sbjct: 107 KGWSKVDCDGEGVRLYLNMLKEG---VTPDSHTFPFLL---NGLKRDGGALACGKKLHCH 160
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
+K G+ ++ +V+N+L+ MY + ++ A +F+ +D+ +WN +I +Y E+
Sbjct: 161 VVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEES 220
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
++ M ++ + P T ++ LSAC + + VH + + + N+LV+
Sbjct: 221 IELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL-RLENALVN 279
Query: 237 MYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEM----------- 285
YA CG ++ A IFRSMK ++VISW +++ G GN A T F +M
Sbjct: 280 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 339
Query: 286 -------------------LQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYN 326
+Q + PD T + VL AC+H G ++ G + ++
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN-K 398
Query: 327 VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV 385
++ V ++D+ + G E+A + +M + W +++ +G + A KV
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVGLANNGQGQEAIKV 456
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 159/342 (46%), Gaps = 10/342 (2%)
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMY--GVMKDIETAHQLFEE 151
+S + I+G + KQLH ++ GV + + L + + + A++LF +
Sbjct: 34 YSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVK 93
Query: 152 MLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG-ALAF 210
+ D+V WN++I E + + M++ G+ PD TF L+ G ALA
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 211 GRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLA 270
G+ +H C LG V N+LV MY+ CG ++ A +F ++V SWN MI G
Sbjct: 154 GKKLH-CHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT 330
E++ L EM + N+V P +T L VL ACS D +R + +S + +P+
Sbjct: 213 RMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS-ECKTEPS 270
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
++ +V+ G ++ A + ++M + I W S++ GN+KLA R +
Sbjct: 271 LRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLA---RTYFD 326
Query: 391 ELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPE 432
++ + ++ + Y G +NE + R MQ G+ E
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDE 368
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/479 (35%), Positives = 262/479 (54%), Gaps = 44/479 (9%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
MN ++H+ I ++ F + + +G +V + G++N A VFD + + WN++
Sbjct: 168 MNKGVQVHSLIAKSPFLSD-VYIGSALV--DMYSKCGNVNDAQRVFDEMGDRNVVSWNSL 224
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLH------ 114
I F +A+ ++ M E V PD T + ++ L ++ +G+++H
Sbjct: 225 ITCFEQNGPAVEALDVFQMML--ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 115 -------------------CSTLKLG--VENHAHVRN-----SLIHMYGVMKDIETAHQL 148
CS +K + + +RN S+I Y + + A +
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342
Query: 149 FEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL 208
F +M +++V+WN++I G+ EAL F + + + P +F L AC + L
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Query: 209 AFGRWVHSCIQRATYL---GEITS--VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWN 263
G H + + + GE V NSL+DMY KCG VEE Y +FR M ++ +SWN
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
MI+G A +G G EAL LF EML E+ +PD IT +GVL AC H GFV+EGR YF M+R
Sbjct: 463 AMIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAE 383
D+ V P HY CMVDLLGRAG +EEA +I+ MPM+ ++++W SLLAAC+ H N+ L +
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGK 581
Query: 384 KVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
V + LLE+EP +S YVLL+NMYA G+W ++ R+SM++ GV K +PG S++ + G
Sbjct: 582 YVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK-QPGCSWIKIQG 639
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 193/391 (49%), Gaps = 40/391 (10%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G ++ A S+F + + D WN+M+ GF ++ E+A+ ++ M + V + ++F+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK--EGFVLNEYSFAS 157
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
+L GL + G Q+H K + ++ ++L+ MY ++ A ++F+EM +++
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
+V+WNS+I C G EALD F M++S + PD+ T +SAC ++ A+ G+ VH
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRS----------------------- 253
+ + L +SN+ VDMYAKC ++EA IF S
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 254 --------MKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
M +NV+SWN +I G +G EAL+LF + +E+V P +F +L AC
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC-PTHYSFANILKAC 396
Query: 306 SHGGFVDEG-RRYFDIMSRDYNVQPTVKHY----GCMVDLLGRAGLVEEAYILIKNMPME 360
+ + G + + ++ + Q + ++D+ + G VEE Y++ + M ME
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-ME 455
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
+ + W +++ +G A ++ + +LE
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 34/308 (11%)
Query: 106 SVVLGKQLHCSTLKLGVENHAHVRNSLIHMY---GVMKD--------------------- 141
S + + +H S +K G N ++N LI Y G ++D
Sbjct: 35 SAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVT 94
Query: 142 -------IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDAT 194
++ A LF M +D WNS++ + EAL +F M + G ++ +
Sbjct: 95 GLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYS 154
Query: 195 FVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM 254
F LSAC + + G VHS I ++ +L ++ + ++LVDMY+KCG V +A +F M
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVY-IGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 255 KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEG 314
+NV+SWN++I +G EAL +F +M+ E+ V PD +T V+ AC+ + G
Sbjct: 214 GDRNVVSWNSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVG 272
Query: 315 RRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACR 374
+ + ++ ++ + VD+ + ++EA + +MP+ N I S+++
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYA 331
Query: 375 THGNVKLA 382
+ K A
Sbjct: 332 MAASTKAA 339
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 44/254 (17%)
Query: 191 DDATFVVTLSAC--GAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE--- 245
D + F L +C + A+ + R+VH+ + ++ + EI + N L+D Y+KCG++E
Sbjct: 18 DSSPFAKLLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIF-IQNRLIDAYSKCGSLEDGR 75
Query: 246 ----------------------------EAYEIFRSMKGKNVISWNTMILGLASHGNGTE 277
EA +FRSM ++ +WN+M+ G A H E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 278 ALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCM 337
AL FA M +E V + +F VL ACS +++G + ++++ + V +
Sbjct: 136 ALCYFAMMHKEGFVLNE-YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS-DVYIGSAL 193
Query: 338 VDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE--LEPC 395
VD+ + G V +A + M + N + W SL+ +G A V + +LE +EP
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEP- 251
Query: 396 HSSDYVLLANMYAS 409
D V LA++ ++
Sbjct: 252 ---DEVTLASVISA 262
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 260/450 (57%), Gaps = 8/450 (1%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIV-FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
+ +K H+ G H+N + K++ F + +YA S+FD ++ P++F+++T
Sbjct: 24 VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDT 83
Query: 60 MIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
MIR ++QP + ++ M ++ E + P TF FL+ +GKQ+HC +
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 119 KLGV-ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEAL 177
K GV + HV+ ++ +Y K + A ++F+E+ D+V W+ +++ V CG +E L
Sbjct: 144 KNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 178 DFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
+ F M+ G+ PD+ + L+AC +GALA G+W+H +++ ++ V +LVDM
Sbjct: 204 EVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDM 263
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
YAKCG +E A E+F + +NV SW +I G A++G +A T + +E+ ++PD +
Sbjct: 264 YAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
LGVL AC+HGGF++EGR + M Y + P +HY C+VDL+ RAG +++A LI+ M
Sbjct: 324 LLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKM 383
Query: 358 PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD----YVLLANMYASTGQW 413
PM+ A VW +LL CRTH NV+L E ++LL+LE + + V L+N+Y S +
Sbjct: 384 PMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443
Query: 414 NEMSKERRSMQERGVKKPEPGNSFVGLPGI 443
E K R +++RG++K PG S + + GI
Sbjct: 444 PEAFKVRGMIEQRGIRKT-PGWSLLEVDGI 472
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/437 (37%), Positives = 259/437 (59%), Gaps = 14/437 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K+IH + + GF+ + V ++ F V G+ A VF + D W +I GF
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGV---CGESRNACKVFGEMPVRDVVSWTGIITGF 182
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
T ++A+ + +M V P+ T+ +L G +G + LGK +H LK
Sbjct: 183 TRTGLYKEALDTFSKMD-----VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI 237
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM- 183
N+LI MY + + A ++F E+ KD V+WNS+I LV C + EA+D F+ M
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ 297
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
SG++PD LSAC ++GA+ GRWVH I A + T + ++VDMYAKCG
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWD-THIGTAIVDMYAKCGY 356
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+E A EIF ++ KNV +WN ++ GLA HG+G E+L F EM++ +P+ +TFL L
Sbjct: 357 IETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG-FKPNLVTFLAALN 415
Query: 304 ACSHGGFVDEGRRYFDIM-SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
AC H G VDEGRRYF M SR+YN+ P ++HYGCM+DLL RAGL++EA L+K MP++ +
Sbjct: 416 ACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPD 475
Query: 363 AIVWRSLLAACRTHGNV-KLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERR 421
+ ++L+AC+ G + +L +++ L++E S YVLL+N++A+ +W+++++ RR
Sbjct: 476 VRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRR 535
Query: 422 SMQERGVKKPEPGNSFV 438
M+ +G+ K PG+S++
Sbjct: 536 LMKVKGISKV-PGSSYI 551
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 189/380 (49%), Gaps = 19/380 (5%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKP-DAFLWNTMIR 62
K+I ++ ++ L++ K++ F S A +Y+ + + +F +NT++
Sbjct: 22 FKQIQTQLITRDLLRDDLIINKVVTFLGKS--ADFASYSSVILHSIRSVLSSFSYNTLLS 79
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
+ ++P + YK PD FTF + K G + GKQ+H K+G
Sbjct: 80 SYAVCDKPRVTIFAYKTFVSN--GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGF 137
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ +V+NSL+H YGV + A ++F EM +D+V+W II G Y EALD F++
Sbjct: 138 YDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSK 197
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
M + P+ AT+V L + G +G L+ G+ +H I + L + + N+L+DMY KC
Sbjct: 198 M---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET-GNALIDMYVKCE 253
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ +A +F ++ K+ +SWN+MI GL EA+ LF+ M + ++PDG VL
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVK---HYG-CMVDLLGRAGLVEEAYILIKNMP 358
AC+ G VD GR +Y + +K H G +VD+ + G +E A + I N
Sbjct: 314 SACASLGAVDHGR-----WVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA-LEIFNGI 367
Query: 359 MECNAIVWRSLLAACRTHGN 378
N W +LL HG+
Sbjct: 368 RSKNVFTWNALLGGLAIHGH 387
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 229/380 (60%), Gaps = 4/380 (1%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
P AFLWN ++R + P A+ Y M + V+PD ++ ++K + LGK
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRST--VLPDRYSLPIVIKAAVQIHDFTLGK 137
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCG 171
+LH ++LG + I +Y + E A ++F+E + L +WN+II L G
Sbjct: 138 ELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAG 197
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCI-QRATYLGEITSV 230
+ NEA++ F M +SG+ PDD T V ++CG +G L+ +H C+ Q T +
Sbjct: 198 RANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 231 SNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
NSL+DMY KCG ++ A IF M+ +NV+SW++MI+G A++GN EAL F +M +E
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM-REFG 316
Query: 291 VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
VRP+ ITF+GVL AC HGG V+EG+ YF +M ++ ++P + HYGC+VDLL R G ++EA
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 351 YILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYAST 410
+++ MPM+ N +VW L+ C G+V++AE V +++ELEP + YV+LAN+YA
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALR 436
Query: 411 GQWNEMSKERRSMQERGVKK 430
G W ++ + R+ M+ + V K
Sbjct: 437 GMWKDVERVRKLMKTKKVAK 456
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 135/274 (49%), Gaps = 10/274 (3%)
Query: 5 KEIHARIYQTGFHQNHLV-VGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
KE+H+ + GF + G I ++C AG+ A VFD + WN +I G
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYCK----AGEFENARKVFDENPERKLGSWNAIIGG 192
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ + +AV + M++ + PD FT + GGLG + L QLH L+ E
Sbjct: 193 LNHAGRANEAVEMFVDMKRS--GLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTE 250
Query: 124 NHAHVR--NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+ + NSLI MYG ++ A +FEEM +++V+W+S+I G EAL+ F
Sbjct: 251 EKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFR 310
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
+M + G+RP+ TFV LSAC G + G+ + ++ L S +VD+ ++
Sbjct: 311 QMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRD 370
Query: 242 GAVEEAYEIFRSMKGK-NVISWNTMILGLASHGN 274
G ++EA ++ M K NV+ W ++ G G+
Sbjct: 371 GQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGD 404
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/437 (34%), Positives = 261/437 (59%), Gaps = 8/437 (1%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++H+ + + GF+ + V + ++ +G +N A +FD + W + G+
Sbjct: 132 DLHSLVVKCGFNHD---VAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT 188
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+ + +A+ +K+M E V PD++ +L +G + G+ + ++ ++ +
Sbjct: 189 TSGRHREAIDLFKKMV--EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
+ VR +L+++Y +E A +F+ M+ KD+V W+++I E ++ F +M+Q
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
++PD + V LS+C ++GAL G W S I R +L + ++N+L+DMYAKCGA+
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF-MANALIDMYAKCGAMA 365
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
+E+F+ MK K+++ N I GLA +G+ + +F + ++ + PDG TFLG+LC C
Sbjct: 366 RGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT-EKLGISPDGSTFLGLLCGC 424
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
H G + +G R+F+ +S Y ++ TV+HYGCMVDL GRAG++++AY LI +MPM NAIV
Sbjct: 425 VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIV 484
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
W +LL+ CR + +LAE V K L+ LEP ++ +YV L+N+Y+ G+W+E ++ R M +
Sbjct: 485 WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNK 544
Query: 426 RGVKKPEPGNSFVGLPG 442
+G+KK PG S++ L G
Sbjct: 545 KGMKKI-PGYSWIELEG 560
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 199/386 (51%), Gaps = 11/386 (2%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+NHLK+IH + H + +V ++ ++ Y+ +F P+ FL+N++
Sbjct: 26 VNHLKQIHVSLINHHLHHDTFLVNLLL---KRTLFFRQTKYSYLLFSHTQFPNIFLYNSL 82
Query: 61 IRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
I GF N + + + LF + G + FTF +LK S LG LH +K
Sbjct: 83 INGFVNNHLFHETLDLFLSIRKHG---LYLHGFTFPLVLKACTRASSRKLGIDLHSLVVK 139
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G + SL+ +Y + AH+LF+E+ ++ +V W ++ G++ EA+D
Sbjct: 140 CGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDL 199
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
F +MV+ G++PD V LSAC +G L G W+ ++ + + + V +LV++YA
Sbjct: 200 FKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME-MQKNSFVRTTLVNLYA 258
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
KCG +E+A +F SM K++++W+TMI G AS+ E + LF +MLQEN ++PD + +
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN-LKPDQFSIV 317
Query: 300 GVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
G L +C+ G +D G ++ R + + ++D+ + G + + + K M
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK- 375
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKV 385
E + ++ + ++ +G+VKL+ V
Sbjct: 376 EKDIVIMNAAISGLAKNGHVKLSFAV 401
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 288 bits (738), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 251/444 (56%), Gaps = 11/444 (2%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRV-DKPDAFLWNT 59
++ +K++H ++ GF + V ++ + + D A VFD + D+ D+ LWN
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVED---AQKVFDELPDRDDSVLWNA 232
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
++ G+ + E A+L + +M+ E V T + +L G + G+ +H +K
Sbjct: 233 LVNGYSQIFRFEDALLVFSKMR--EEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVK 290
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G + V N+LI MYG K +E A+ +FE M +DL WNS++ CG ++ L
Sbjct: 291 TGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLAL 350
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS---VSNSLVD 236
F RM+ SG+RPD T L CG + +L GR +H + + L +S + NSL+D
Sbjct: 351 FERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMD 410
Query: 237 MYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGI 296
MY KCG + +A +F SM+ K+ SWN MI G G AL +F+ M + V +PD I
Sbjct: 411 MYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGV-KPDEI 469
Query: 297 TFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
TF+G+L ACSH GF++EGR + M YN+ PT HY C++D+LGRA +EEAY L +
Sbjct: 470 TFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAIS 529
Query: 357 MPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEM 416
P+ N +VWRS+L++CR HGN LA K L ELEP H YVL++N+Y G++ E+
Sbjct: 530 KPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEV 589
Query: 417 SKERRSMQERGVKKPEPGNSFVGL 440
R +M+++ VKK PG S++ L
Sbjct: 590 LDVRDAMRQQNVKKT-PGCSWIVL 612
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 182/365 (49%), Gaps = 16/365 (4%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH + + GF + G +V + G M AV VF ++ D F +N +I GF
Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLV--NMYAKCGLMRRAVLVFGGSER-DVFGYNALISGF 136
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG--KQLHCSTLKLGV 122
P A+ Y+ M+ ++PD +TF LLK G ++ L K++H KLG
Sbjct: 137 VVNGSPLDAMETYREMRAN--GILPDKYTFPSLLK---GSDAMELSDVKKVHGLAFKLGF 191
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK-DLVAWNSIIDCLVCCGKYNEALDFFT 181
++ +V + L+ Y +E A ++F+E+ ++ D V WN++++ ++ +AL F+
Sbjct: 192 DSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
+M + G+ T LSA G + GR +H + T G VSN+L+DMY K
Sbjct: 252 KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG-LAVKTGSGSDIVVSNALIDMYGKS 310
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
+EEA IF +M +++ +WN+++ G+ L LF ML +RPD +T V
Sbjct: 311 KWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG-IRPDIVTLTTV 369
Query: 302 LCACSHGGFVDEGRRY--FDIMSRDYNVQPTVKH-YGCMVDLLGRAGLVEEAYILIKNMP 358
L C + +GR + I+S N + + + + ++D+ + G + +A ++ +M
Sbjct: 370 LPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR 429
Query: 359 MECNA 363
++ +A
Sbjct: 430 VKDSA 434
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 193 ATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFR 252
AT + TL C G+ +H + R +L + SLV+MYAKCG + A +F
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 253 SMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ ++V +N +I G +G+ +A+ + EM + N + PD TF +L
Sbjct: 121 GSE-RDVFGYNALISGFVVNGSPLDAMETYREM-RANGILPDKYTFPSLL 168
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 288 bits (736), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 249/463 (53%), Gaps = 45/463 (9%)
Query: 20 HLVVGKIIVFCAVSVPAGDM---------NYAVSVFDRVDKPDAFLWNTMIRGFGNTNQP 70
H V KI C V G M NYA +VFD + D WNTMI +
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 71 EKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRN 130
++A ++ M+ + +V+PD ++ G G++ + ++ ++ V H+
Sbjct: 194 DEAFKLFEEMK--DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 131 SLIHMY---GVMK----------------------------DIETAHQLFEEMLNKDLVA 159
+L+ MY G M ++ A +F++ KDLV
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
W ++I V EAL F M SG++PD + +SAC +G L +WVHSCI
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
E+ S++N+L++MYAKCG ++ ++F M +NV+SW++MI L+ HG ++AL
Sbjct: 372 VNGLESEL-SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
+LFA M QENV P+ +TF+GVL CSH G V+EG++ F M+ +YN+ P ++HYGCMVD
Sbjct: 431 SLFARMKQENV-EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVD 489
Query: 340 LLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD 399
L GRA L+ EA +I++MP+ N ++W SL++ACR HG ++L + K +LELEP H
Sbjct: 490 LFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGA 549
Query: 400 YVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
VL++N+YA +W ++ RR M+E+ V K E G S + G
Sbjct: 550 LVLMSNIYAREQRWEDVRNIRRVMEEKNVFK-EKGLSRIDQNG 591
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 190/408 (46%), Gaps = 39/408 (9%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRV-DKPDAFLWNT 59
+NH+K++HA I +T + + + +VS + +++YA++VF + P++ ++N
Sbjct: 25 LNHIKQLHAHILRTVINHK---LNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNP 81
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+R +++P +LFY+R++ + D F+F +LK V + ++ G +LH K
Sbjct: 82 FLRDLSRSSEPRATILFYQRIRHVGGRL--DQFSFLPILKAVSKVSALFEGMELHGVAFK 139
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
+ V + MY I A +F+EM ++D+V WN++I+ G +EA
Sbjct: 140 IATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKL 199
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS----------------------- 216
F M S + PD+ +SACG G + + R ++
Sbjct: 200 FEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAG 259
Query: 217 --CIQRATYLGEITSVSN-----SLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGL 269
C+ A SV N ++V Y+KCG +++A IF + K+++ W TMI
Sbjct: 260 AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
EAL +F EM ++PD ++ V+ AC++ G +D+ + + + ++
Sbjct: 320 VESDYPQEALRVFEEMCCSG-IKPDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLES 377
Query: 330 TVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
+ ++++ + G ++ + + MP N + W S++ A HG
Sbjct: 378 ELSINNALINMYAKCGGLDATRDVFEKMPRR-NVVSWSSMINALSMHG 424
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 249/436 (57%), Gaps = 11/436 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++HA TGF ++ V +I+ F + + +FD + + D +N +I +
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRM---LFDEMPELDFVSYNVVISSY 326
Query: 65 GNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+Q E ++ F++ MQ G F F+ +L I L S+ +G+QLHC L +
Sbjct: 327 SQADQYEASLHFFREMQCMGFDR---RNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+ HV NSL+ MY + E A +F+ + + V+W ++I V G + L FT+M
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
S +R D +TF L A + +L G+ +H+ I R+ L + S S LVDMYAKCG+
Sbjct: 444 RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGS 502
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+++A ++F M +N +SWN +I A +G+G A+ FA+M+ E+ ++PD ++ LGVL
Sbjct: 503 IKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI-ESGLQPDSVSILGVLT 561
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
ACSH GFV++G YF MS Y + P KHY CM+DLLGR G EA L+ MP E +
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 621
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCH-SSDYVLLANMYASTGQWNEMSKERRS 422
I+W S+L ACR H N LAE+ + L +E ++ YV ++N+YA+ G+W ++ +++
Sbjct: 622 IMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKA 681
Query: 423 MQERGVKKPEPGNSFV 438
M+ERG+KK P S+V
Sbjct: 682 MRERGIKKV-PAYSWV 696
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 190/399 (47%), Gaps = 17/399 (4%)
Query: 2 NHLKEIHARIYQTGFHQN-HLVVGKIIV--FCAVSVPAGDMNYAVSVFDRVDKPDAFLWN 58
N + ++HA + GF N L V +++ +C V ++ A +F+ + + D+ +N
Sbjct: 164 NAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR----RLDLACVLFEEIPEKDSVTFN 219
Query: 59 TMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCST 117
T+I G+ +++ LF K Q G P FTFS +LK V GL LG+QLH +
Sbjct: 220 TLITGYEKDGLYTESIHLFLKMRQSGHQ---PSDFTFSGVLKAVVGLHDFALGQQLHALS 276
Query: 118 LKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEAL 177
+ G A V N ++ Y + LF+EM D V++N +I +Y +L
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 178 DFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
FF M G + F LS + +L GR +H C I V NSLVDM
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH-CQALLATADSILHVGNSLVDM 395
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
YAKC EEA IF+S+ + +SW +I G G L LF +M N +R D T
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQST 454
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
F VL A + + G++ + R N++ G +VD+ + G +++A + + M
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEM 513
Query: 358 PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE--LEP 394
P + NA+ W +L++A +G+ + A ++E L+P
Sbjct: 514 P-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 15/384 (3%)
Query: 10 RIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQ 69
++Y H+N + +I + V GD++ A +FD + W ++ + +
Sbjct: 69 KVYDEMPHKNTVSTNTMI---SGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSH 125
Query: 70 PEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAH-- 127
++A +++M + +PD TF+ LL Q+H +KLG + +
Sbjct: 126 FDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLT 185
Query: 128 VRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSG 187
V N L+ Y ++ ++ A LFEE+ KD V +N++I G Y E++ F +M QSG
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Query: 188 MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEA 247
+P D TF L A + A G+ +H+ + T SV N ++D Y+K V E
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHA-LSVTTGFSRDASVGNQILDFYSKHDRVLET 304
Query: 248 YEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSH 307
+F M + +S+N +I + +L F EM R + F +L ++
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRN-FPFATMLSIAAN 363
Query: 308 GGFVDEGRRYFDIMSRDYNVQPTVKHYG-CMVDLLGRAGLVEEAYILIKNMPMECNAIVW 366
+ GR+ ++ H G +VD+ + + EEA ++ K++P + W
Sbjct: 364 LSSLQMGRQLH--CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR-TTVSW 420
Query: 367 RSLLAACRTHG----NVKLAEKVR 386
+L++ G +KL K+R
Sbjct: 421 TALISGYVQKGLHGAGLKLFTKMR 444
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 287 bits (735), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 256/459 (55%), Gaps = 47/459 (10%)
Query: 21 LVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM 80
+ V ++ C S GD++ A VF + + D WN+MI GF P+KA+ +K+M
Sbjct: 166 VFVANSLIHCYFS--CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 81 QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVR----NSLIHMY 136
+ + V T +L + ++ G+Q+ CS ++ EN +V N+++ MY
Sbjct: 224 ESED--VKASHVTMVGVLSACAKIRNLEFGRQV-CSYIE---ENRVNVNLTLANAMLDMY 277
Query: 137 GVMKDIETAHQLFE---------------------------EMLN----KDLVAWNSIID 165
IE A +LF+ E+LN KD+VAWN++I
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 166 CLVCCGKYNEALDFFTRM-VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYL 224
GK NEAL F + +Q M+ + T V TLSAC +GAL GRW+HS I++
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 225 GEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAE 284
V+++L+ MY+KCG +E++ E+F S++ ++V W+ MI GLA HG G EA+ +F +
Sbjct: 398 MNF-HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 285 MLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRA 344
M QE V+P+G+TF V CACSH G VDE F M +Y + P KHY C+VD+LGR+
Sbjct: 457 M-QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 345 GLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLA 404
G +E+A I+ MP+ + VW +LL AC+ H N+ LAE LLELEP + +VLL+
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 405 NMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGI 443
N+YA G+W +S+ R+ M+ G+KK EPG S + + G+
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKK-EPGCSSIEIDGM 613
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 201/408 (49%), Gaps = 36/408 (8%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ LK+ H + +TG + K+ A+S A + YA VFD + KP++F WNT+
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS-LEYARKVFDEIPKPNSFAWNTL 101
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
IR + + P ++ + M E P+ +TF FL+K + S+ LG+ LH +K
Sbjct: 102 IRAYASGPDPVLSIWAFLDMV-SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
V + V NSLIH Y D+++A ++F + KD+V+WNS+I+ V G ++AL+ F
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+M ++ T V LSAC + L FGR V S I+ +T ++N+++DMY K
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT-LANAMLDMYTK 279
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLA------------------------------ 270
CG++E+A +F +M+ K+ ++W TM+ G A
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 271 -SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
+G EAL +F E+ + ++ + IT + L AC+ G ++ G R+ + + ++
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRM 398
Query: 330 TVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
++ + + G +E++ + ++ + VW +++ HG
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEKR-DVFVWSAMIGGLAMHG 445
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 254/452 (56%), Gaps = 15/452 (3%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ L+++HA + TG+ ++ ++ K+I ++ A + Y +F V PD FL+N++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLIT---LACSARAIAYTHLLFLSVPLPDDFLFNSV 78
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
I+ P V +Y+RM +V P +TF+ ++K L ++ +GK +HC +
Sbjct: 79 IKSTSKLRLPLHCVAYYRRMLSS--NVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVS 136
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
G +V+ +L+ Y D+E A Q+F+ M K +VAWNS++ G +EA+ F
Sbjct: 137 GFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVF 196
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+M +SG PD ATFV LSAC GA++ G WVH I + L + +L+++Y++
Sbjct: 197 YQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII-SEGLDLNVKLGTALINLYSR 255
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG V +A E+F MK NV +W MI +HG G +A+ LF +M + P+ +TF+
Sbjct: 256 CGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
VL AC+H G V+EGR + M++ Y + P V+H+ CMVD+LGRAG ++EAY I +
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDAT 375
Query: 361 CNAI---VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMS 417
A +W ++L AC+ H N L ++ K L+ LEP + +V+L+N+YA +G+ +E+S
Sbjct: 376 GKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVS 435
Query: 418 KERRSMQERGVKKPEPGNSFVGLPGIRLENET 449
R M ++K VG I +EN+T
Sbjct: 436 HIRDGMMRNNLRKQ------VGYSVIEVENKT 461
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 246/434 (56%), Gaps = 8/434 (1%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH++I +T F N V +I A G ++ A + R D W TMI G+
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYA---KLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
N +KA+ +++M + + D + + GL ++ G+Q+H G +
Sbjct: 567 TQYNFDDKALTTFRQML--DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 624
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+N+L+ +Y IE ++ FE+ D +AWN+++ G EAL F RM
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+ G+ ++ TF + A + G+ VH+ I + Y E T V N+L+ MYAKCG++
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE-TEVCNALISMYAKCGSI 743
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
+A + F + KN +SWN +I + HG G+EAL F +M+ NV RP+ +T +GVL A
Sbjct: 744 SDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV-RPNHVTLVGVLSA 802
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CSH G VD+G YF+ M+ +Y + P +HY C+VD+L RAGL+ A I+ MP++ +A+
Sbjct: 803 CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 862
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
VWR+LL+AC H N+++ E HLLELEP S+ YVLL+N+YA + +W+ R+ M+
Sbjct: 863 VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMK 922
Query: 425 ERGVKKPEPGNSFV 438
E+GVKK EPG S++
Sbjct: 923 EKGVKK-EPGQSWI 935
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 183/372 (49%), Gaps = 17/372 (4%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
+++IHARI G + +V +I + + G ++ A VFD + D W MI G
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRN---GFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 64 FG-NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
N + E LF G ++P + FS +L + S+ +G+QLH LKLG
Sbjct: 263 LSKNECEAEAIRLFCDMYVLG---IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ +V N+L+ +Y + ++ +A +F M +D V +N++I+ L CG +A++ F R
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
M G+ PD T + AC A G L G+ +H+ + + + +L+++YAKC
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN-NKIEGALLNLYAKCA 438
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+E A + F + +NV+ WN M++ + + +F +M E +V P+ T+ +L
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSIL 497
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC--MVDLLGRAGLVEEAY-ILIKNMPM 359
C G ++ G + I S+ + Y C ++D+ + G ++ A+ ILI+
Sbjct: 498 KTCIRLGDLELGEQ---IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 360 ECNAIVWRSLLA 371
+ + W +++A
Sbjct: 555 D--VVSWTTMIA 564
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 174/370 (47%), Gaps = 12/370 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++H++I + G N + K+ F + GD+ A VFD + + F WN MI+
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDF---YLFKGDLYGAFKVFDEMPERTIFTWNKMIKEL 161
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG--KQLHCSTLKLGV 122
+ N + + RM +V P+ TFS +L+ G GSV +Q+H L G+
Sbjct: 162 ASRNLIGEVFGLFVRMVS--ENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGL 218
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ V N LI +Y ++ A ++F+ + KD +W ++I L EA+ F
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
M G+ P F LSAC + +L G +H + + + + T V N+LV +Y G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD-TYVCNALVSLYFHLG 337
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ A IF +M ++ +++NT+I GL+ G G +A+ LF M + + PD T ++
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLV 396
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
ACS G + G++ ++ K G +++L + +E A +E N
Sbjct: 397 VACSADGTLFRGQQLHAYTTK-LGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-N 454
Query: 363 AIVWRSLLAA 372
++W +L A
Sbjct: 455 VVLWNVMLVA 464
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 15/325 (4%)
Query: 78 KRMQQGEPH-VVPDTFTFSFLLK-IVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHM 135
KR+ E + P+ T +LL+ + GS+ G++LH LKLG++++ + L
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 136 YGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATF 195
Y D+ A ++F+EM + + WN +I L E F RMV + P++ TF
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 196 VVTLSACGAMGALAFGRWVHSCIQRATYLG--EITSVSNSLVDMYAKCGAVEEAYEIFRS 253
L AC G++AF V R Y G + T V N L+D+Y++ G V+ A +F
Sbjct: 190 SGVLEACRG-GSVAFDV-VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 254 MKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDE 313
++ K+ SW MI GL+ + EA+ LF +M ++ P F VL AC ++
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM-PTPYAFSSVLSACKKIESLEI 306
Query: 314 GRRYFDIMSRDYNVQPTVKHYGC--MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
G + ++ + + + Y C +V L G + A + NM +A+ + +L+
Sbjct: 307 GEQLHGLVLK---LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLIN 362
Query: 372 ACRTHGNVKLAEKV--RKHLLELEP 394
G + A ++ R HL LEP
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEP 387
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 237/401 (59%), Gaps = 16/401 (3%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKI 100
A S FDR+ DA WNTMI G+ + EKA LFY M++ E S+ I
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNE---------VSWNAMI 193
Query: 101 VGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM-LNKDLVA 159
G + L K H K+ ++I Y K +E A +F++M +NK+LV
Sbjct: 194 SGYIECGDLEKASH--FFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
WN++I V + + L F M++ G+RP+ + L C + AL GR +H +
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
++T ++T+++ SL+ MY KCG + +A+++F MK K+V++WN MI G A HGN +AL
Sbjct: 312 KSTLCNDVTALT-SLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
LF EM+ +N +RPD ITF+ VL AC+H G V+ G YF+ M RDY V+P HY CMVD
Sbjct: 371 CLFREMI-DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVD 429
Query: 340 LLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD 399
LLGRAG +EEA LI++MP +A V+ +LL ACR H NV+LAE + LL+L +++
Sbjct: 430 LLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAG 489
Query: 400 YVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGL 440
YV LAN+YAS +W ++++ R+ M+E V K PG S++ +
Sbjct: 490 YVQLANIYASKNRWEDVARVRKRMKESNVVKV-PGYSWIEI 529
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 39/283 (13%)
Query: 130 NSLIHMYGVMKD---IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
NSL + G+ KD + AHQLF+E+ D ++N ++ C V + +A FF RM
Sbjct: 96 NSL--LIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK 153
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVH-------------------SC--IQRATYLG 225
D A++ ++ G + R + C +++A++
Sbjct: 154 ----DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF 209
Query: 226 EITSVS-----NSLVDMYAKCGAVEEAYEIFRSMK-GKNVISWNTMILGLASHGNGTEAL 279
++ V +++ Y K VE A +F+ M KN+++WN MI G + + L
Sbjct: 210 KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
LF ML+E +RP+ L CS + GR+ I+S+ + V ++
Sbjct: 270 KLFRAMLEEG-IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLIS 327
Query: 340 LLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
+ + G + +A+ L + M + + + W ++++ HGN A
Sbjct: 328 MYCKCGELGDAWKLFEVMKKK-DVVAWNAMISGYAQHGNADKA 369
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
N ++ Y + E+A F M K+ SWNTMI G A G +A LF M+++N V
Sbjct: 128 NIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV 187
Query: 292 RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT--VKHYGCMVDLLGRAGLVEE 349
+ + G+++ G + S + V P V + M+ +A VE
Sbjct: 188 SWNAMI----------SGYIECGD--LEKASHFFKVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 350 AYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
A + K+M + N + W ++++ + + K+ + +LE
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 230/387 (59%), Gaps = 38/387 (9%)
Query: 87 VVPDTFTFSFLLKIVGGL--GSVVLGKQLHCSTLKLGVE-NHAHVRNSLIHMY------- 136
V P+ TF LL G GS LG LH KLG++ NH V ++I MY
Sbjct: 67 VEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFK 126
Query: 137 ----------------------GVMKD--IETAHQLFEEMLNKDLVAWNSIIDCLVCCGK 172
G M+ ++ A ++F++M +DL++W ++I+ V G
Sbjct: 127 KARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGY 186
Query: 173 YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSN 232
EAL +F M SG++PD + L+AC +GAL+FG WVH + + + VSN
Sbjct: 187 QEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNV-RVSN 245
Query: 233 SLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
SL+D+Y +CG VE A ++F +M+ + V+SWN++I+G A++GN E+L F +M QE +
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM-QEKGFK 304
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYI 352
PD +TF G L ACSH G V+EG RYF IM DY + P ++HYGC+VDL RAG +E+A
Sbjct: 305 PDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Query: 353 LIKNMPMECNAIVWRSLLAACRTHG-NVKLAEKVRKHLLELEPCHSSDYVLLANMYASTG 411
L+++MPM+ N +V SLLAAC HG N+ LAE++ KHL +L S+YV+L+NMYA+ G
Sbjct: 365 LVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADG 424
Query: 412 QWNEMSKERRSMQERGVKKPEPGNSFV 438
+W SK RR M+ G+KK +PG S +
Sbjct: 425 KWEGASKMRRKMKGLGLKK-QPGFSSI 450
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
+G ++ A +FD++ + D W MI GF E+A+L+++ MQ V PD
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI--SGVKPDYVAII 210
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
L LG++ G +H L +N+ V NSLI +Y +E A Q+F M +
Sbjct: 211 AALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR 270
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
+V+WNS+I G +E+L +F +M + G +PD TF L+AC +G + G
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGN 274
++ + LVD+Y++ G +E+A ++ +SM K N + +++ ++HGN
Sbjct: 331 QIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 119/268 (44%), Gaps = 42/268 (15%)
Query: 147 QLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACG--A 204
Q + ++ V+W S I+ L G+ EA F+ M +G+ P+ TF+ LS CG
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 205 MGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNT 264
G+ A G +H + V +++ MY+K G ++A +F M+ KN ++WNT
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 265 MILGLASHG------------------------NG-------TEALTLFAEMLQENVVRP 293
MI G G NG EAL F EM Q + V+P
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM-QISGVKP 204
Query: 294 DGITFLGVLCACSHGGFVDEG---RRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
D + + L AC++ G + G RY ++S+D+ + V+ ++DL R G VE A
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRY--VLSQDF--KNNVRVSNSLIDLYCRCGCVEFA 260
Query: 351 YILIKNMPMECNAIVWRSLLAACRTHGN 378
+ NM + W S++ +GN
Sbjct: 261 RQVFYNMEKR-TVVSWNSVIVGFAANGN 287
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 284 bits (727), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 260/474 (54%), Gaps = 40/474 (8%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFC----AVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
LK IH + +T + V +++ C + P + YA +F ++ P+ F++N
Sbjct: 28 LKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNL 87
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+IR F +P KA FY +M + + PD TF FL+K + V++G+Q H ++
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSR--IWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 145
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGK------- 172
G +N +V NSL+HMY I A ++F +M +D+V+W S++ CG
Sbjct: 146 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREM 205
Query: 173 ------------------------YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL 208
+ +A+D F M + G+ ++ V +S+C +GAL
Sbjct: 206 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGAL 265
Query: 209 AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
FG + + ++ + + +LVDM+ +CG +E+A +F + + +SW+++I G
Sbjct: 266 EFGERAYEYVVKSHMTVNLI-LGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKG 324
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
LA HG+ +A+ F++M+ + P +TF VL ACSHGG V++G ++ M +D+ ++
Sbjct: 325 LAVHGHAHKAMHYFSQMISLGFI-PRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIE 383
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKH 388
P ++HYGC+VD+LGRAG + EA I M ++ NA + +LL AC+ + N ++AE+V
Sbjct: 384 PRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNM 443
Query: 389 LLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
L++++P HS YVLL+N+YA GQW+++ R M+E+ VKKP PG S + + G
Sbjct: 444 LIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP-PGWSLIEIDG 496
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 240/400 (60%), Gaps = 10/400 (2%)
Query: 39 MNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLL 98
+N A +FD++ + + W TMI + +KA+ M + +V P+ +T+S +L
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD--NVRPNVYTYSSVL 169
Query: 99 KIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLV 158
+ G+ V + LHC +K G+E+ VR++LI ++ + + E A +F+EM+ D +
Sbjct: 170 RSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 159 AWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCI 218
WNSII + + AL+ F RM ++G + AT L AC + L G H +
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH--V 284
Query: 219 QRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEA 278
Y ++ ++N+LVDMY KCG++E+A +F MK ++VI+W+TMI GLA +G EA
Sbjct: 285 HIVKYDQDLI-LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 279 LTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV 338
L LF E ++ + +P+ IT +GVL ACSH G +++G YF M + Y + P +HYGCM+
Sbjct: 344 LKLF-ERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMI 402
Query: 339 DLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSS 398
DLLG+AG +++A L+ M E +A+ WR+LL ACR N+ LAE K ++ L+P +
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAG 462
Query: 399 DYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
Y LL+N+YA++ +W+ + + R M++RG+KK EPG S++
Sbjct: 463 TYTLLSNIYANSQKWDSVEEIRTRMRDRGIKK-EPGCSWI 501
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 135/268 (50%), Gaps = 10/268 (3%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
M+ ++ +H I + G + V +I VF + P A+SVFD + DA +WN+
Sbjct: 175 MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED----ALSVFDEMVTGDAIVWNS 230
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+I GF ++ + A+ +KRM++ + + T + +L+ GL + LG Q H +K
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRA--GFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
+ + N+L+ MY +E A ++F +M +D++ W+++I L G EAL
Sbjct: 289 --YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
F RM SG +P+ T V L AC G L G + +++ + + ++D+
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 240 KCGAVEEAYEIFRSMKGK-NVISWNTMI 266
K G +++A ++ M+ + + ++W T++
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 11/257 (4%)
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
N LI+MY + AHQLF++M +++++W ++I C + +AL+ M++ +R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYE 249
P+ T+ L +C M + R +H I + ++ V ++L+D++AK G E+A
Sbjct: 160 PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVF-VRSALIDVFAKLGEPEDALS 215
Query: 250 IFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGG 309
+F M + I WN++I G A + AL LF M + + + T VL AC+
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQATLTSVLRACTGLA 274
Query: 310 FVDEG-RRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRS 368
++ G + + I+ D ++ +VD+ + G +E+A + M E + I W +
Sbjct: 275 LLELGMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMK-ERDVITWST 329
Query: 369 LLAACRTHGNVKLAEKV 385
+++ +G + A K+
Sbjct: 330 MISGLAQNGYSQEALKL 346
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 243/405 (60%), Gaps = 10/405 (2%)
Query: 45 VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL 104
VF+ + + D +NT+I G+ + E A+ + M G + PD+FT S +L I
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM--GTTDLKPDSFTLSSVLPIFSEY 255
Query: 105 GSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSII 164
V+ GK++H ++ G+++ ++ +SL+ MY IE + ++F + +D ++WNS++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 165 DCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYL 224
V G+YNEAL F +MV + ++P F + AC + L G+ +H + R +
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF- 374
Query: 225 GEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAE 284
G ++++LVDMY+KCG ++ A +IF M + +SW +I+G A HG+G EA++LF E
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 285 MLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRA 344
M ++ V +P+ + F+ VL ACSH G VDE YF+ M++ Y + ++HY + DLLGRA
Sbjct: 435 MKRQGV-KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 493
Query: 345 GLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLA 404
G +EEAY I M +E VW +LL++C H N++LAEKV + + ++ + YVL+
Sbjct: 494 GKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMC 553
Query: 405 NMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLENET 449
NMYAS G+W EM+K R M+++G++K +P S+ I ++N+T
Sbjct: 554 NMYASNGRWKEMAKLRLRMRKKGLRK-KPACSW-----IEMKNKT 592
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 140/331 (42%), Gaps = 43/331 (12%)
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSL-IHMYGVMKDIETAHQLFEEMLNK 155
L+K + S KQLH ++ ++ +H S+ I +Y +K + A LF+ + +
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIR--TQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
++AW S+I C +++AL F M SG PD F L +C M L FG VH
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKC---------------------------------- 241
I R ++ + N+L++MYAK
Sbjct: 129 GFIVRLGMDCDLYT-GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 242 --GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
++ +F M K+V+S+NT+I G A G +AL + EM + ++PD T
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD-LKPDSFTLS 246
Query: 300 GVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
VL S V +G+ + R + V +VD+ ++ +E++ + +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
+ I W SL+A +G A ++ + ++
Sbjct: 306 R-DGISWNSLVAGYVQNGRYNEALRLFRQMV 335
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 261/468 (55%), Gaps = 38/468 (8%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSV-----------------------------P 35
K+IH ++ + GF +++L+VG +++ +V
Sbjct: 159 KQIHGQVIKLGF-ESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTF 94
G + A+ +F ++K D+ W MI+G ++A+ ++ M+ QG + D + F
Sbjct: 218 CGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFREMKVQG---LKMDQYPF 273
Query: 95 SFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN 154
+L GGLG++ GKQ+H ++ ++H +V ++LI MY K + A +F+ M
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
K++V+W +++ G+ EA+ F M +SG+ PD T +SAC + +L G
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN 274
H + + +T VSNSLV +Y KCG ++++ +F M ++ +SW M+ A G
Sbjct: 394 HGKAITSGLIHYVT-VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
E + LF +M+Q + +PDG+T GV+ ACS G V++G+RYF +M+ +Y + P++ HY
Sbjct: 453 AVETIQLFDKMVQHGL-KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEP 394
CM+DL R+G +EEA I MP +AI W +LL+ACR GN+++ + + L+EL+P
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 395 CHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
H + Y LL+++YAS G+W+ +++ RR M+E+ VKK EPG S++ G
Sbjct: 572 HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK-EPGQSWIKWKG 618
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 187/395 (47%), Gaps = 49/395 (12%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
AG ++ S F+++ D WN +I G+ + AV Y M + + T
Sbjct: 85 AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR-DFSANLTRVTLM 143
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMY---GVMKD----------- 141
+LK+ G V LGKQ+H +KLG E++ V + L++MY G + D
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 142 -----------------IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
IE A QLF M KD V+W ++I L G EA++ F M
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
G++ D F L ACG +GA+ G+ +H+CI R + I V ++L+DMY KC +
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY-VGSALIDMYCKCKCL 321
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
A +F MK KNV+SW M++G G EA+ +F +M Q + + PD T + A
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM-QRSGIDPDHYTLGQAISA 380
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHY----GCMVDLLGRAGLVEEAYILIKNMPME 360
C++ ++EG ++ + + HY +V L G+ G ++++ L M +
Sbjct: 381 CANVSSLEEGSQF-----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 361 CNAIVWRSLLAACRTHG----NVKLAEKVRKHLLE 391
+A+ W ++++A G ++L +K+ +H L+
Sbjct: 436 -DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 153/309 (49%), Gaps = 14/309 (4%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIV--FCAVSVPAGDMNYAVSVFDRVDKPDAFLWN 58
+N K+IHA I +T F Q+H+ VG ++ +C ++YA +VFDR+ + + W
Sbjct: 286 INEGKQIHACIIRTNF-QDHIYVGSALIDMYCKCKC----LHYAKTVFDRMKQKNVVSWT 340
Query: 59 TMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
M+ G+G T + E+AV + MQ+ + PD +T + + S+ G Q H +
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRS--GIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
G+ ++ V NSL+ +YG DI+ + +LF EM +D V+W +++ G+ E +
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS--NSLVD 236
F +MVQ G++PD T +SAC G + G+ + + G + S+ + ++D
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM--TSEYGIVPSIGHYSCMID 516
Query: 237 MYAKCGAVEEAYEIFRSMK-GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDG 295
++++ G +EEA M + I W T++ + GN +++ + P G
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 296 ITFLGVLCA 304
T L + A
Sbjct: 577 YTLLSSIYA 585
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 149/362 (41%), Gaps = 44/362 (12%)
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G G NQ + + + + P+ P+TF ++ ++ + S +++
Sbjct: 15 GLGARNQSRYVKMIHGNIIRALPY--PETFLYNNIVHAYALMKSSTYARRVFDRI----P 68
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ + N+L+ Y I FE++ ++D V WN +I+ G A+ +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 183 MVQS-GMRPDDATFVVTLSACGAMGALAFGRWVH-------------------------S 216
M++ T + L + G ++ G+ +H
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 217 CIQRATYL-----GEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLAS 271
CI A + T + NSL+ CG +E+A ++FR M+ K+ +SW MI GLA
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQ 247
Query: 272 HGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTV 331
+G EA+ F EM + ++ D F VL AC G ++EG++ + R N Q +
Sbjct: 248 NGLAKEAIECFREMKVQG-LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHI 305
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
++D+ + + A + M + N + W +++ +G AE+ K L+
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVG---YGQTGRAEEAVKIFLD 361
Query: 392 LE 393
++
Sbjct: 362 MQ 363
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 265/492 (53%), Gaps = 65/492 (13%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ +++ HA + +TG + K++ F A + ++YA S+ +R+ P+ F N++
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 61 IRGFGNTNQPEKAVLFYKRMQQG---------------------------------EPHV 87
IR + N++ PE A+ ++ M G + +
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL 171
Query: 88 VPDTFTFSFLLKIVGGLGSVVLGKQ---------------LHCSTLKLGVENHAHVR--- 129
V D F + L+ + G G + ++ L + L+ G+ + A
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 130 ---------NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
N +I Y ++ A ++F+ M +D+V+WN+++ G YNE L+ F
Sbjct: 232 MEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVF 291
Query: 181 TRMVQ-SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS-VSNSLVDMY 238
+M+ S +PD T V LSAC ++G+L+ G WVH I + EI ++ +LVDMY
Sbjct: 292 NKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGI--EIEGFLATALVDMY 349
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
+KCG +++A E+FR+ ++V +WN++I L+ HG G +AL +F+EM+ E +P+GITF
Sbjct: 350 SKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF-KPNGITF 408
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+GVL AC+H G +D+ R+ F++MS Y V+PT++HYGCMVDLLGR G +EEA L+ +P
Sbjct: 409 IGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
+ +I+ SLL AC+ G ++ AE++ LLEL SS Y ++N+YAS G+W ++
Sbjct: 469 ADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVID 528
Query: 419 ERRSMQERGVKK 430
RR+M+ V +
Sbjct: 529 GRRNMRAERVNR 540
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/447 (35%), Positives = 247/447 (55%), Gaps = 45/447 (10%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G + +++++F + PD FL+ I ++A L Y ++ E + P+ FTFS
Sbjct: 78 GKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE--INPNEFTFSS 135
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDI-------------- 142
LLK S GK +H LK G+ +V L+ +Y D+
Sbjct: 136 LLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 143 -----------------ETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
E A LF+ M +D+V+WN +ID G N+AL F +++
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 186 SGM-RPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
G +PD+ T V LSAC +GAL GRW+H + +++ + V L+DMY+KCG++
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFV-KSSRIRLNVKVCTGLIDMYSKCGSL 310
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
EEA +F K++++WN MI G A HG +AL LF EM ++P ITF+G L A
Sbjct: 311 EEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQA 370
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
C+H G V+EG R F+ M ++Y ++P ++HYGC+V LLGRAG ++ AY IKNM M+ +++
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSV 430
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
+W S+L +C+ HG+ L +++ ++L+ L +S YVLL+N+YAS G + ++K R M+
Sbjct: 431 LWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMK 490
Query: 425 ERGVKKPEPGNSFVGLPGIRLENETAE 451
E+G+ K EP G+ I +EN+ E
Sbjct: 491 EKGIVK-EP-----GISTIEIENKVHE 511
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 163/354 (46%), Gaps = 42/354 (11%)
Query: 112 QLHCSTLKLGVENHAH--VRNSLIH-MYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLV 168
Q+H + L+ + H V N +H Y I + LF + ++ DL + + I+
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 169 CCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQR-------- 220
G ++A + +++ S + P++ TF L +C G+ +H+ + +
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPY 162
Query: 221 -ATYL-------GEITSV--------------SNSLVDMYAKCGAVEEAYEIFRSMKGKN 258
AT L G++ S S +++ YAK G VE A +F SM ++
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 259 VISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYF 318
++SWN MI G A HG +AL LF ++L E +PD IT + L ACS G ++ G R+
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG-RWI 281
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN 378
+ + ++ VK ++D+ + G +EEA ++ + P + + + W +++A HG
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK-DIVAWNAMIAGYAMHGY 340
Query: 379 VKLAEKVRKHLLELEPCHSSDYVLLANMY--ASTGQWNEMSKERRSM-QERGVK 429
+ A ++ + + +D + + A G NE + SM QE G+K
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIK 394
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 258/438 (58%), Gaps = 7/438 (1%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ + K+IH I + + + +I ++ A ++F + + D ++ M
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALI---DAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
I G+ + ++ ++ + + + + P+ T +L ++G L ++ LG++LH +K
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVK--ISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
G +N ++ ++I MY + A+++FE + +D+V+WNS+I + A+D F
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+M SG+ D + LSAC + + +FG+ +H + + + ++ S S +L+DMYAK
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSES-TLIDMYAK 589
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG ++ A +F++MK KN++SWN++I +HG ++L LF EM++++ +RPD ITFL
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
++ +C H G VDEG R+F M+ DY +QP +HY C+VDL GRAG + EAY +K+MP
Sbjct: 650 IISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFP 709
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKER 420
+A VW +LL ACR H NV+LAE L++L+P +S YVL++N +A+ +W ++K R
Sbjct: 710 PDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVR 769
Query: 421 RSMQERGVKKPEPGNSFV 438
M+ER V+K PG S++
Sbjct: 770 SLMKEREVQKI-PGYSWI 786
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 164/355 (46%), Gaps = 10/355 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G ++ +FDRV + D +WN M+ G+ + + + M+ + + P+ TF
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ--ISPNAVTFDC 244
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
+L + + LG QLH + GV+ ++NSL+ MY + A +LF M D
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
V WN +I V G E+L FF M+ SG+ PD TF L + L + + +H
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC 364
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
I R + +I ++++L+D Y KC V A IF +V+ + MI G +G
Sbjct: 365 YIMRHSISLDIF-LTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFD-IMSRDYNVQPTVKHYG 335
++L +F +++ + P+ IT + +L + GR I+ + ++ + + G
Sbjct: 424 DSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI---G 479
Query: 336 C-MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHL 389
C ++D+ + G + AY + + + + + W S++ C N A + + +
Sbjct: 480 CAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKII---VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
K++HA + + +I+ C G M Y + + +P WN++I
Sbjct: 55 KQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRP----WNSII 110
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
F +A+ FY +M V PD TF L+K L + L + LG
Sbjct: 111 SSFVRNGLLNQALAFYFKMLCF--GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
++ + V +SLI Y I+ +LF+ +L KD V WN +++ CG + + F+
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFS 228
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
M + P+ TF LS C + + G +H + + E S+ NSL+ MY+KC
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE-GSIKNSLLSMYSKC 287
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G ++A ++FR M + ++WN MI G G E+LT F EM+ V+ PD ITF +
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSL 346
Query: 302 LCACS 306
L + S
Sbjct: 347 LPSVS 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 153/376 (40%), Gaps = 53/376 (14%)
Query: 58 NTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCST 117
+++ + F P K L + + +P S LL+ + GKQ+H
Sbjct: 4 SSVAKRFAPAIAPYKKSLPLRNSSRFLEETIPRRL--SLLLQACSNPNLLRQGKQVHAFL 61
Query: 118 LKLGVENHAHVRNSLIHMYGVMKDIETAHQLFE--EMLNKDLVAWNSIIDCLVCCGKYNE 175
+ + ++ ++ MY + ++F ++ + WNSII V G N+
Sbjct: 62 IVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQ 121
Query: 176 ALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS--VSNS 233
AL F+ +M+ G+ PD +TF + AC A+ + + + LG + V++S
Sbjct: 122 ALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF---KGIDFLSDTVSSLGMDCNEFVASS 178
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRP 293
L+ Y + G ++ ++F + K+ + WN M+ G A G + F+ M + + P
Sbjct: 179 LIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-ISP 237
Query: 294 DGITFLGVLCACS-----------HG------------------------GFVDEGRRYF 318
+ +TF VL C+ HG G D+ + F
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF 297
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME---CNAIVWRSLLAACRT 375
+MSR V + CM+ ++GL+EE+ M +AI + SLL +
Sbjct: 298 RMMSRADTVT-----WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 376 HGNVKLAEKVRKHLLE 391
N++ +++ +++
Sbjct: 353 FENLEYCKQIHCYIMR 368
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 260/492 (52%), Gaps = 49/492 (9%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+NHLK++ + + +G +H + K++ FC + + +++YA +FDR P+ L+ +
Sbjct: 37 LNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRL--CNLSYARFIFDRFSFPNTHLYAAV 94
Query: 61 IRGFGNTN--QPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCST 117
+ + ++ A F++ M + P P+ F + +LK L S +H
Sbjct: 95 LTAYSSSLPLHASSAFSFFRLMVNRSVPR--PNHFIYPLVLKSTPYLSSAFSTPLVHTHL 152
Query: 118 LKLGVENHAHVRNSLIHMYGVM--------------------------------KDIETA 145
K G + V+ +L+H Y DI A
Sbjct: 153 FKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNA 212
Query: 146 HQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV-QSGMRPDDATFVVTLSACGA 204
LFE+M +D+ +WN+I+ G + EA+ F RM+ + +RP++ T V LSAC
Sbjct: 213 VALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQ 272
Query: 205 MGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNT 264
G L + +H+ R ++ VSNSLVD+Y KCG +EEA +F+ K++ +WN+
Sbjct: 273 TGTLQLAKGIHAFAYRRDLSSDVF-VSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNS 331
Query: 265 MILGLASHGNGTEALTLFAEMLQENV--VRPDGITFLGVLCACSHGGFVDEGRRYFDIMS 322
MI A HG EA+ +F EM++ N+ ++PD ITF+G+L AC+HGG V +GR YFD+M+
Sbjct: 332 MINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMT 391
Query: 323 RDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
+ ++P ++HYGC++DLLGRAG +EA ++ M M+ + +W SLL AC+ HG++ LA
Sbjct: 392 NRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
Query: 383 EKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
E K+L+ L P + ++AN+Y G W E + R+ ++ + KP PG S
Sbjct: 452 EVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKP-PGWS-----R 505
Query: 443 IRLENETAERLS 454
I ++NE + S
Sbjct: 506 IEIDNEVHQFYS 517
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 281 bits (718), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 243/430 (56%), Gaps = 13/430 (3%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+H I G Q+ + K+I + G ++YA VFD+ K ++WN + R
Sbjct: 99 VHRHILDNGSDQDPFLATKLI---GMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGG----LGSVVLGKQLHCSTLKLGV 122
E+ + Y +M + V D FT++++LK + ++ GK++H + G
Sbjct: 156 AGHGEEVLGLYWKMNR--IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY 213
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+H ++ +L+ MY ++ A +F M +++V+W+++I C GK EAL F
Sbjct: 214 SSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFRE 273
Query: 183 MVQ--SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
M++ P+ T V L AC ++ AL G+ +H I R L I V ++LV MY +
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRG-LDSILPVISALVTMYGR 332
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG +E +F M ++V+SWN++I HG G +A+ +F EML N P +TF+
Sbjct: 333 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA-NGASPTPVTFVS 391
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
VL ACSH G V+EG+R F+ M RD+ ++P ++HY CMVDLLGRA ++EA ++++M E
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKER 420
VW SLL +CR HGNV+LAE+ + L LEP ++ +YVLLA++YA W+E+ + +
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 421 RSMQERGVKK 430
+ ++ RG++K
Sbjct: 512 KLLEHRGLQK 521
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 149/309 (48%), Gaps = 12/309 (3%)
Query: 89 PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQL 148
P T+ L+ G S+ ++H L G + + LI MY + ++ A ++
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 149 FEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGA---- 204
F++ + + WN++ L G E L + +M + G+ D T+ L AC A
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 205 MGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNT 264
+ L G+ +H+ + R Y + + +LVDMYA+ G V+ A +F M +NV+SW+
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVY-IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 265 MILGLASHGNGTEALTLFAEMLQENV-VRPDGITFLGVLCACSHGGFVDEGRRYFD-IMS 322
MI A +G EAL F EM++E P+ +T + VL AC+ +++G+ I+
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 323 RDYN-VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKL 381
R + + P + +V + GR G +E + M + + + W SL+++ HG K
Sbjct: 314 RGLDSILPVI---SALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHGYGKK 369
Query: 382 AEKVRKHLL 390
A ++ + +L
Sbjct: 370 AIQIFEEML 378
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 244/438 (55%), Gaps = 9/438 (2%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
+ HA I + G + V +I + S G ++A +FD + D W MI GF
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSS---GLFDFASRLFDGAEDKDVVTWTAMIDGFV 180
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG-VEN 124
+A++++ M++ V + T +LK G + V G+ +H L+ G V+
Sbjct: 181 RNGSASEAMVYFVEMKK--TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKC 238
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ +SL+ MYG + A ++F+EM ++++V W ++I V +++ + F M+
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+S + P++ T LSAC +GAL GR VH C + T+ +L+D+Y KCG +
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVH-CYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
EEA +F + KNV +W MI G A+HG +A LF ML +V P+ +TF+ VL A
Sbjct: 358 EEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV-SPNEVTFMAVLSA 416
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
C+HGG V+EGRR F M +N++P HY CMVDL GR GL+EEA LI+ MPME +
Sbjct: 417 CAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
VW +L +C H + +L + +++L+P HS Y LLAN+Y+ + W+E+++ R+ M+
Sbjct: 477 VWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMK 536
Query: 425 ERGVKKPEPGNSFVGLPG 442
++ V K PG S++ + G
Sbjct: 537 DQQVVK-SPGFSWIEVKG 553
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 187/384 (48%), Gaps = 12/384 (3%)
Query: 3 HLKEIHARIYQTG--FHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
HLK+IH + + + + L + +++ C + A YA + ++ LW+++
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTA--ATQFRYARRLLCQLQTLSIQLWDSL 73
Query: 61 IRGF--GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
I F G T + L Y+ M++ V+P TF LLK V L Q H +
Sbjct: 74 IGHFSGGITLNRRLSFLAYRHMRRN--GVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIV 130
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
K G+++ VRNSLI Y + A +LF+ +KD+V W ++ID V G +EA+
Sbjct: 131 KFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMV 190
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
+F M ++G+ ++ T V L A G + + FGR VH + + +SLVDMY
Sbjct: 191 YFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMY 250
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
KC ++A ++F M +NV++W +I G + + +F EML+ +V P+ T
Sbjct: 251 GKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA-PNEKTL 309
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
VL AC+H G + GRR M ++ +++ ++DL + G +EEA IL+
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEA-ILVFERL 367
Query: 359 MECNAIVWRSLLAACRTHGNVKLA 382
E N W +++ HG + A
Sbjct: 368 HEKNVYTWTAMINGFAAHGYARDA 391
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 240/432 (55%), Gaps = 14/432 (3%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+H + +TGF N V ++ + + G++NY + VF+ + + + W ++I GF N
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLL---HMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
N+ A+ ++ MQ V + LL G +V GK H LG + +
Sbjct: 186 NNRFSDAIEAFREMQSN--GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYF 243
Query: 127 HVR--------NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
+ SLI MY D+ TA LF+ M + LV+WNSII G EAL
Sbjct: 244 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALC 303
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
F M+ G+ PD TF+ + A G G+ +H+ + + ++ + ++ +LV+MY
Sbjct: 304 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKD-AAIVCALVNMY 362
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
AK G E A + F ++ K+ I+W +I+GLASHG+G EAL++F M ++ PDGIT+
Sbjct: 363 AKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITY 422
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
LGVL ACSH G V+EG+RYF M + ++PTV+HYGCMVD+L RAG EEA L+K MP
Sbjct: 423 LGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP 482
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
++ N +W +LL C H N++L +++R + E E S YVLL+N+YA G+W ++
Sbjct: 483 VKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKL 542
Query: 419 ERRSMQERGVKK 430
R SM+ + V K
Sbjct: 543 IRESMKSKRVDK 554
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 213/415 (51%), Gaps = 12/415 (2%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
L ++H + ++ +N + + ++I FC +++YA SVF+ +D P ++WN+MIR
Sbjct: 21 ELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIR 80
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G+ N+ P+KA++FY+ M + PD FTF ++LK GL + G +H +K G
Sbjct: 81 GYSNSPNPDKALIFYQEMLR--KGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGF 138
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
E + +V L+HMY ++ ++FE++ ++VAW S+I V ++++A++ F
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFRE 198
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY-------LGEITSVSNSLV 235
M +G++ ++ V L ACG + G+W H +Q + +G ++ SL+
Sbjct: 199 MQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLI 258
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDG 295
DMYAKCG + A +F M + ++SWN++I G + +G+ EAL +F +ML + PD
Sbjct: 259 DMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA-PDK 317
Query: 296 ITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIK 355
+TFL V+ A G G+ +S+ V+ +V++ + G E A +
Sbjct: 318 VTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI-VCALVNMYAKTGDAESAKKAFE 376
Query: 356 NMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYAST 410
++ + + I W ++ +HG+ A + + + E L +YA +
Sbjct: 377 DLEKK-DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACS 430
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 279 bits (714), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 248/440 (56%), Gaps = 12/440 (2%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK-PDAFLWNTMIR 62
+K++H GF V + + + G + AVSVF +D+ D WN+MI
Sbjct: 157 IKQLHCFSVSGGFDSYSSVNNAFVTYYS---KGGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
+G + KA+ YK M + D FT + +L + L ++ G+Q H +K G
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKI--DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 123 ENHAHVRNSLIHMY---GVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE-ALD 178
++HV + LI Y G + + ++F+E+L+ DLV WN++I + +E A+
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVK 331
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
F +M + G RPDD +FV SAC + + + + +H ++ SV+N+L+ +Y
Sbjct: 332 SFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLY 391
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
K G +++A +F M N +S+N MI G A HG+GTEAL L+ ML + P+ ITF
Sbjct: 392 YKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA-PNKITF 450
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+ VL AC+H G VDEG+ YF+ M + ++P +HY CM+DLLGRAG +EEA I MP
Sbjct: 451 VAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP 510
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
+ ++ W +LL ACR H N+ LAE+ L+ ++P ++ YV+LANMYA +W EM+
Sbjct: 511 YKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMAS 570
Query: 419 ERRSMQERGVKKPEPGNSFV 438
R+SM+ + ++K +PG S++
Sbjct: 571 VRKSMRGKRIRK-KPGCSWI 589
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 207/425 (48%), Gaps = 25/425 (5%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A +FD + +PD +NT+I G+ + + A++ +KRM++ V D FT S L I
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEV--DGFTLSGL--IA 148
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMY---GVMKDIETAHQLFEEMLNKDLV 158
V L KQLHC ++ G ++++ V N+ + Y G++++ + +E+ +D V
Sbjct: 149 ACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL--RDEV 206
Query: 159 AWNSIIDCLVCCGKYNE---ALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
+WNS+I V G++ E AL + M+ G + D T L+A ++ L GR H
Sbjct: 207 SWNSMI---VAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYE---IFRSMKGKNVISWNTMILGLASH 272
+ +A + + + V + L+D Y+KCG + Y+ +F+ + +++ WNTMI G + +
Sbjct: 264 GKLIKAGF-HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMN 322
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
+E +Q RPD +F+ V ACS+ + ++ + + + +
Sbjct: 323 EELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE- 391
++ L ++G +++A + MP E NA+ + ++ HG+ A + + +L+
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 392 -LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPG--NSFVGLPGIRLENE 448
+ P + +V + + A G+ +E + +M+E +PE + + L G + E
Sbjct: 442 GIAP-NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 449 TAERL 453
AER
Sbjct: 501 EAERF 505
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 252/434 (58%), Gaps = 13/434 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+HA I Q+ F + +V+G ++ + G + A VF+++ + D W T+I G+
Sbjct: 82 VHAHILQSIFRHD-IVMGNTLL--NMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
++P A+LF+ +M + P+ FT S ++K G QLH +K G +++
Sbjct: 139 HDRPCDALLFFNQMLRFG--YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNV 196
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
HV ++L+ +Y ++ A +F+ + +++ V+WN++I +AL+ F M++
Sbjct: 197 HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD 256
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE--ITSVSNSLVDMYAKCGAV 244
G RP ++ AC + G L G+WVH+ + ++ GE + N+L+DMYAK G++
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS---GEKLVAFAGNTLLDMYAKSGSI 313
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
+A +IF + ++V+SWN+++ A HG G EA+ F EM + + RP+ I+FL VL A
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI-RPNEISFLSVLTA 372
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CSH G +DEG Y+++M +D + P HY +VDLLGRAG + A I+ MP+E A
Sbjct: 373 CSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
+W++LL ACR H N +L +H+ EL+P +V+L N+YAS G+WN+ ++ R+ M+
Sbjct: 432 IWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 491
Query: 425 ERGVKKPEPGNSFV 438
E GVKK EP S+V
Sbjct: 492 ESGVKK-EPACSWV 504
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 149/310 (48%), Gaps = 7/310 (2%)
Query: 70 PEKAVLFYKRMQQGEPHVVP-DTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHV 128
P +L E +P D ++ LLK ++ G+ +H L+ + +
Sbjct: 38 PSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVM 97
Query: 129 RNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGM 188
N+L++MY +E A ++FE+M +D V W ++I + +AL FF +M++ G
Sbjct: 98 GNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY 157
Query: 189 RPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAY 248
P++ T + A A G +H + + + V ++L+D+Y + G +++A
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNV-HVGSALLDLYTRYGLMDDAQ 216
Query: 249 EIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
+F +++ +N +SWN +I G A +AL LF ML++ RP ++ + ACS
Sbjct: 217 LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG-FRPSHFSYASLFGACSST 275
Query: 309 GFVDEGRRYFDIMSRDYNVQPTVKHYG-CMVDLLGRAGLVEEAYILIKNMPMECNAIVWR 367
GF+++G+ M + + + V G ++D+ ++G + +A + + + + W
Sbjct: 276 GFLEQGKWVHAYMIK--SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR-DVVSWN 332
Query: 368 SLLAACRTHG 377
SLL A HG
Sbjct: 333 SLLTAYAQHG 342
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 247/444 (55%), Gaps = 18/444 (4%)
Query: 2 NHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVD-KPDAFLWNTM 60
N LK++HA++ + G + +I A G ++ A VFD + D WN+M
Sbjct: 220 NLLKQVHAKVLKLGLQHEITICNAMISSYA---DCGSVSDAKRVFDGLGGSKDLISWNSM 276
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
I GF E A + +MQ+ V D +T++ LL G + GK LH +K
Sbjct: 277 IAGFSKHELKESAFELFIQMQR--HWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKK 334
Query: 121 GVENHAHVRNSLIHMY-----GVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE 175
G+E N+LI MY G M+D A LFE + +KDL++WNSII G +
Sbjct: 335 GLEQVTSATNALISMYIQFPTGTMED---ALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 176 ALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
A+ FF+ + S ++ DD F L +C + L G+ +H+ ++ ++ +S SL+
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVIS-SLI 450
Query: 236 DMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
MY+KCG +E A + F+ + K + ++WN MILG A HG G +L LF++M +NV + D
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV-KLD 509
Query: 295 GITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILI 354
+TF +L ACSH G + EG ++M Y +QP ++HY VDLLGRAGLV +A LI
Sbjct: 510 HVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELI 569
Query: 355 KNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWN 414
++MP+ + +V ++ L CR G +++A +V HLLE+EP YV L++MY+ +W
Sbjct: 570 ESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWE 629
Query: 415 EMSKERRSMQERGVKKPEPGNSFV 438
E + ++ M+ERGVKK PG S++
Sbjct: 630 EKASVKKMMKERGVKKV-PGWSWI 652
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 142/275 (51%), Gaps = 6/275 (2%)
Query: 34 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
+ G + YA +FD + K D+ WNTMI G+ + + E A + M++ V D ++
Sbjct: 46 IKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDV--DGYS 103
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
FS LLK + + LG+Q+H +K G E + +V +SL+ MY + +E A + F+E+
Sbjct: 104 FSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS 163
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRM-VQSGMRPDDATFVVTLSACGAMGALAFGR 212
+ V+WN++I V A M +++ + D TF L+ +
Sbjct: 164 EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK 223
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKG-KNVISWNTMILGLAS 271
VH+ + + EIT + N+++ YA CG+V +A +F + G K++ISWN+MI G +
Sbjct: 224 QVHAKVLKLGLQHEIT-ICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 272 HGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
H A LF +M Q + V D T+ G+L ACS
Sbjct: 283 HELKESAFELFIQM-QRHWVETDIYTYTGLLSACS 316
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 6/284 (2%)
Query: 114 HCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKY 173
HC +K G + +V N ++ Y + A+ LF+EM +D V+WN++I CGK
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 174 NEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNS 233
+A FT M +SG D +F L ++ G VH + + Y + V +S
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVY-VGSS 141
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRP 293
LVDMYAKC VE+A+E F+ + N +SWN +I G + A L M + V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 294 DGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYIL 353
D TF +L F + ++ + + +Q + M+ G V +A +
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLK-LGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 354 IKNMPMECNAIVWRSLLAACRTH----GNVKLAEKVRKHLLELE 393
+ + I W S++A H +L ++++H +E +
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETD 304
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 258/448 (57%), Gaps = 22/448 (4%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIV--FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
KE+HA + G + VG +V +C +FDR LWN MI
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR----KIGLWNAMIA 377
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G+ ++A+L + M++ ++ ++ T + ++ G+ + +H +K G+
Sbjct: 378 GYSQNEHDKEALLLFIGMEES-AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ V+N+L+ MY + I+ A ++F +M ++DLV WN++I V + +AL +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 183 M------VQSG-----MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS 231
M V G ++P+ T + L +C A+ ALA G+ +H+ + ++ +V
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV-AVG 555
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
++LVDMYAKCG ++ + ++F + KNVI+WN +I+ HGNG EA+ L M+ + V
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV- 614
Query: 292 RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAY 351
+P+ +TF+ V ACSH G VDEG R F +M DY V+P+ HY C+VDLLGRAG ++EAY
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 352 ILIKNMPMECN-AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYAST 410
L+ MP + N A W SLL A R H N+++ E ++L++LEP +S YVLLAN+Y+S
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 411 GQWNEMSKERRSMQERGVKKPEPGNSFV 438
G W++ ++ RR+M+E+GV+K EPG S++
Sbjct: 735 GLWDKATEVRRNMKEQGVRK-EPGCSWI 761
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 179/374 (47%), Gaps = 20/374 (5%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K+IHA +Y+ G+ + + V +V + GD VFDR+ + + WN++I
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLV--NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL 174
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLG---SVVLGKQLHCSTLKLG 121
+ + E A+ ++ M + +V P +FT ++ L +++GKQ+H L+ G
Sbjct: 175 CSFEKWEMALEAFRCML--DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
E ++ + N+L+ MYG + + ++ L +DLV WN+++ L + EAL++
Sbjct: 233 -ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
MV G+ PD+ T L AC + L G+ +H+ + L E + V ++LVDMY C
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
V +F M + + WN MI G + + + EAL LF M + + + T GV
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 302 LCACSHGGFVD--EGRRYFDI---MSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
+ AC G E F + + RD VQ T ++D+ R G ++ A +
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT------LMDMYSRLGKIDIAMRIFGK 465
Query: 357 MPMECNAIVWRSLL 370
M + + + W +++
Sbjct: 466 ME-DRDLVTWNTMI 478
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 11/264 (4%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
W ++R +N +AVL Y M + PD + F LLK V L + LGKQ+H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIV--LGIKPDNYAFPALLKAVADLQDMELGKQIHAH 122
Query: 117 TLKLGVE-NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE 175
K G + V N+L+++Y D +++F+ + ++ V+WNS+I L K+
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 176 ALDFFTRMVQSGMRPDDATFVVTLSACGAMG---ALAFGRWVHSCIQRATYLGEITS-VS 231
AL+ F M+ + P T V ++AC + L G+ VH+ R GE+ S +
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK---GELNSFII 239
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
N+LV MY K G + + + S G+++++WNT++ L + EAL EM+ E V
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-V 298
Query: 292 RPDGITFLGVLCACSHGGFVDEGR 315
PD T VL ACSH + G+
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGK 322
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 117/240 (48%), Gaps = 9/240 (3%)
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
W ++ V EA+ + M+ G++PD+ F L A + + G+ +H+ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
+ Y + +V+N+LV++Y KCG Y++F + +N +SWN++I L S AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVD---EGRRYFDIMSRDYNVQPTVKHYGC 336
F ML EN V P T + V+ ACS+ + G++ R + +
Sbjct: 185 EAFRCMLDEN-VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI--INT 241
Query: 337 MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAA-CRTHGNVKLAEKVRKHLLE-LEP 394
+V + G+ G + + +L+ + + + W ++L++ C+ ++ E +R+ +LE +EP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/407 (36%), Positives = 235/407 (57%), Gaps = 6/407 (1%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
GD++ A +VF + + +MI G+ +AV ++ M+ E + PD +T +
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME--EEGISPDVYTVTA 402
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
+L + GK++H + + V N+L+ MY ++ A +F EM KD
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSG-MRPDDATFVVTLSACGAMGALAFGRWVH 215
+++WN+II NEAL F +++ PD+ T L AC ++ A GR +H
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
I R Y + V+NSLVDMYAKCGA+ A+ +F + K+++SW MI G HG G
Sbjct: 523 GYIMRNGYFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 581
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
EA+ LF +M Q + D I+F+ +L ACSH G VDEG R+F+IM + ++PTV+HY
Sbjct: 582 KEAIALFNQMRQAGI-EADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPC 395
C+VD+L R G + +AY I+NMP+ +A +W +LL CR H +VKLAEKV + + ELEP
Sbjct: 641 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 700
Query: 396 HSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
++ YVL+AN+YA +W ++ + R+ + +RG++K PG S++ + G
Sbjct: 701 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK-NPGCSWIEIKG 746
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 176/338 (52%), Gaps = 10/338 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFS 95
GD+ A VFD V A WN ++ + ++ LF K M G V D++TFS
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG---VEMDSYTFS 199
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
+ K L SV G+QLH LK G V NSL+ Y + +++A ++F+EM +
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
D+++WNSII+ V G + L F +M+ SG+ D AT V + C ++ GR VH
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
S +A + E N+L+DMY+KCG ++ A +FR M ++V+S+ +MI G A G
Sbjct: 320 SIGVKACFSRE-DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLA 378
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFD-IMSRDYNVQPTVKHY 334
EA+ LF EM +E + PD T VL C+ +DEG+R + I D V +
Sbjct: 379 GEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN- 436
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAA 372
++D+ + G ++EA ++ M ++ + I W +++
Sbjct: 437 -ALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 175/377 (46%), Gaps = 26/377 (6%)
Query: 23 VGKIIVFCAVSV-PAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQ 81
V K ++F S+ D +++ FDR DA NT +R F + E AV
Sbjct: 33 VRKYVIFNRASLRTVSDCVDSITTFDR-SVTDA---NTQLRRFCESGNLENAVKLL--CV 86
Query: 82 QGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKD 141
G+ + P T +L++ S+ GK++ G +++ + L MY D
Sbjct: 87 SGKWDIDPRTLCS--VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGD 144
Query: 142 IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA 201
++ A ++F+E+ + + WN +++ L G ++ ++ F +M+ SG+ D TF +
Sbjct: 145 LKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKS 204
Query: 202 CGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVIS 261
++ ++ G +H I ++ + GE SV NSLV Y K V+ A ++F M ++VIS
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGF-GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 262 WNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDI- 320
WN++I G S+G + L++F +ML + D T + V C+ + GR I
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 321 ----MSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTH 376
SR+ T ++D+ + G ++ A + + M + + + + S++A
Sbjct: 323 VKACFSREDRFCNT------LLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAGYARE 375
Query: 377 GNVKLAEKVRKHLLELE 393
G LA + K E+E
Sbjct: 376 G---LAGEAVKLFEEME 389
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 277 bits (709), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 248/434 (57%), Gaps = 8/434 (1%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
KEIH ++GF +V + G + A +FD + + + WN+MI +
Sbjct: 256 KEIHGYAMRSGFDS---LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
P++A+L +++M + V P + L LG + G+ +H +++LG++
Sbjct: 313 VQNENPKEAMLIFQKML--DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ V NSLI MY K+++TA +F ++ ++ LV+WN++I G+ +AL++F++M
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
++PD T+V ++A + +W+H + R+ L + V+ +LVDMYAKCGA+
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC-LDKNVFVTTALVDMYAKCGAI 489
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
A IF M ++V +WN MI G +HG G AL LF EM Q+ ++P+G+TFL V+ A
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM-QKGTIKPNGVTFLSVISA 548
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CSH G V+ G + F +M +Y+++ ++ HYG MVDLLGRAG + EA+ I MP++
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
V+ ++L AC+ H NV AEK + L EL P +VLLAN+Y + W ++ + R SM
Sbjct: 609 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 668
Query: 425 ERGVKKPEPGNSFV 438
+G++K PG S V
Sbjct: 669 RQGLRKT-PGCSMV 681
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 191/381 (50%), Gaps = 15/381 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
KEIH + ++GF + + + A +N A VFDR+ + D WNT++ G+
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYA---KCRQVNEARKVFDRMPERDLVSWNTIVAGY 211
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
A+ K M E ++ P T +L V L + +GK++H ++ G ++
Sbjct: 212 SQNGMARMALEMVKSM--CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
++ +L+ MY +ETA QLF+ ML +++V+WNS+ID V EA+ F +M+
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
G++P D + + L AC +G L GR++H + L SV NSL+ MY KC V
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHK-LSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
+ A +F ++ + ++SWN MILG A +G +AL F++M + V+PD T++ V+ A
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM-RSRTVKPDTFTYVSVITA 447
Query: 305 CSHGGFVDEGRRYFDIMSR---DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
+ + ++ R D NV T +VD+ + G + A LI +M E
Sbjct: 448 IAELSITHHAKWIHGVVMRSCLDKNVFVTT----ALVDMYAKCGAIMIAR-LIFDMMSER 502
Query: 362 NAIVWRSLLAACRTHGNVKLA 382
+ W +++ THG K A
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAA 523
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 173/316 (54%), Gaps = 9/316 (2%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
+ L++I +++ G +Q H K++ +FC G ++ A VF+ +D L++T
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY----GSVDEAARVFEPIDSKLNVLYHT 105
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
M++GF + +KA+ F+ RM+ + V P + F++LLK+ G + +GK++H +K
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDD--VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G L +MY + + A ++F+ M +DLV+WN+I+ G AL+
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
M + ++P T V L A A+ ++ G+ +H R+ + + ++S +LVDMYA
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF-DSLVNISTALVDMYA 282
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
KCG++E A ++F M +NV+SWN+MI + N EA+ +F +ML E V+P ++ +
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VKPTDVSVM 341
Query: 300 GVLCACSHGGFVDEGR 315
G L AC+ G ++ GR
Sbjct: 342 GALHACADLGDLERGR 357
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 227/383 (59%), Gaps = 10/383 (2%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
W MI GF + E+AV + M++ V P+ FT+S +L + V+ ++H
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKR--KGVRPNEFTYSVILTAL----PVISPSEVHAQ 418
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
+K E + V +L+ Y + +E A ++F + +KD+VAW++++ G+ A
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGA-LAFGRWVHSCIQRATYLGEITSVSNSLV 235
+ F + + G++P++ TF L+ C A A + G+ H ++ L VS++L+
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR-LDSSLCVSSALL 537
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDG 295
MYAK G +E A E+F+ + K+++SWN+MI G A HG +AL +F EM ++ V+ DG
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM-KKRKVKMDG 596
Query: 296 ITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIK 355
+TF+GV AC+H G V+EG +YFDIM RD + PT +H CMVDL RAG +E+A +I+
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 356 NMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNE 415
NMP + +WR++LAACR H +L + ++ ++P S+ YVLL+NMYA +G W E
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 416 MSKERRSMQERGVKKPEPGNSFV 438
+K R+ M ER VKK EPG S++
Sbjct: 717 RAKVRKLMNERNVKK-EPGYSWI 738
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 10 RIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQ 69
RIY G V ++ ++C +V + + A ++FD+ D + +++ GF +
Sbjct: 21 RIYANG-------VAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGR 73
Query: 70 PEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVR 129
++A + + + + D FS +LK+ L + G+QLHC +K G + V
Sbjct: 74 TQEAKRLFLNIHRLGMEM--DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVG 131
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
SL+ Y + + ++F+EM +++V W ++I +E L F RM G +
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYE 249
P+ TF L G G VH+ + + L + VSNSL+++Y KCG V +A
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARI 250
Query: 250 IFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSH 307
+F + K+V++WN+MI G A++G EAL +F M + N VR +F V+ C++
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCAN 307
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 181/382 (47%), Gaps = 14/382 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++H + + GF + + VG +V + + VFD + + + W T+I G+
Sbjct: 113 RQLHCQCIKFGFLDD-VSVGTSLV--DTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ ++ + + RMQ P++FTF+ L ++ G G Q+H +K G++
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQ--PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V NSLI++Y ++ A LF++ K +V WNS+I G EAL F M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+ +R +++F + C + L F +H + + +L + ++ +L+ Y+KC A+
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD-QNIRTALMVAYSKCTAM 346
Query: 245 EEAYEIFRSMKG-KNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+A +F+ + NV+SW MI G + EA+ LF+EM ++ VRP+ T+ +L
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILT 405
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
A + + ++ +Y TV ++D + G VEEA + + + +
Sbjct: 406 ALP---VISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEAAKVFSGID-DKDI 459
Query: 364 IVWRSLLAACRTHGNVKLAEKV 385
+ W ++LA G + A K+
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKM 481
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 140/285 (49%), Gaps = 12/285 (4%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
E+HA++ +T + ++ V ++ V G + A VF +D D W+ M+ G+
Sbjct: 414 EVHAQVVKTNYERSSTVGTALL---DAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL-GSVVLGKQLHCSTLKLGVEN 124
T + E A+ + + +G + P+ FTFS +L + S+ GKQ H +K +++
Sbjct: 471 QTGETEAAIKMFGELTKG--GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V ++L+ MY +IE+A ++F+ KDLV+WNS+I G+ +ALD F M
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+ ++ D TF+ +AC G + G + R + ++ +VD+Y++ G +
Sbjct: 589 KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
Query: 245 EEAYEIFRSM---KGKNVISWNTMILGLASHGNGTEALTLFAEML 286
E+A ++ +M G + W T++ H TE L AE +
Sbjct: 649 EKAMKVIENMPNPAGSTI--WRTILAACRVH-KKTELGRLAAEKI 690
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/411 (37%), Positives = 236/411 (57%), Gaps = 12/411 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFL--WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTF 94
GD++ A VF+ +D+ D + WN+M + + + A Y M + E PD TF
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE--FKPDLSTF 259
Query: 95 SFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN 154
L ++ G+ +H + LG + N+ I MY +D +A LF+ M +
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
+ V+W +I G +EAL F M++SG +PD T + +S CG G+L G+W+
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
Query: 215 HSCIQRATYLG---EITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLAS 271
+ RA G + + N+L+DMY+KCG++ EA +IF + K V++W TMI G A
Sbjct: 380 DA---RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL 436
Query: 272 HGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTV 331
+G EAL LF++M+ + +P+ ITFL VL AC+H G +++G YF IM + YN+ P +
Sbjct: 437 NGIFLEALKLFSKMIDLDY-KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGL 495
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
HY CMVDLLGR G +EEA LI+NM + +A +W +LL AC+ H NVK+AE+ + L
Sbjct: 496 DHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFN 555
Query: 392 LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
LEP ++ YV +AN+YA+ G W+ ++ R M++R +KK PG S + + G
Sbjct: 556 LEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKK-YPGESVIQVNG 605
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 193/397 (48%), Gaps = 18/397 (4%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+HA + ++ F + + VG V + V ++YA VF+R+ + DA WN M+ GF
Sbjct: 74 VHAHLIKSPFWSD-VFVGTATV--DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQ 130
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
+ +KA ++ M+ E + PD+ T L++ S+ L + +H ++LGV+
Sbjct: 131 SGHTDKAFSLFREMRLNE--ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKD--LVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V N+ I YG D+++A +FE + D +V+WNS+ G+ +A + M+
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS--NSLVDMYAKCG 242
+ +PD +TF+ ++C L GR +HS A +LG + N+ + MY+K
Sbjct: 249 REEFKPDLSTFINLAASCQNPETLTQGRLIHS---HAIHLGTDQDIEAINTFISMYSKSE 305
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
A +F M + +SW MI G A G+ EAL LF M++ +PD +T L ++
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG-EKPDLVTLLSLI 364
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQ-PTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
C G ++ G ++ D + Y + V ++D+ + G + EA + N P E
Sbjct: 365 SGCGKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EK 422
Query: 362 NAIVWRSLLAACRTHGNVKLAEKVRKHLLELE--PCH 396
+ W +++A +G A K+ +++L+ P H
Sbjct: 423 TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH 459
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 6/261 (2%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
WN IR N N P +++L ++ M++G P+ FTF F+ K L V + +H
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRG--GFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
+K + V + + M+ ++ A ++FE M +D WN+++ G ++A
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
F M + + PD T + + + +L +H+ R ++T V+N+ +
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT-VANTWIS 196
Query: 237 MYAKCGAVEEAYEIFRSMK--GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
Y KCG ++ A +F ++ + V+SWN+M + G +A L+ ML+E +PD
Sbjct: 197 TYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE-FKPD 255
Query: 295 GITFLGVLCACSHGGFVDEGR 315
TF+ + +C + + +GR
Sbjct: 256 LSTFINLAASCQNPETLTQGR 276
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 247/444 (55%), Gaps = 42/444 (9%)
Query: 31 AVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPD 90
A+ + G M+ A++ F+++ + D WN+MI GF +A+ + +M + + + PD
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR-DSLLSPD 278
Query: 91 TFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFE 150
FT + +L L + +GKQ+H + G + V N+LI MY +ETA +L E
Sbjct: 279 RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
Query: 151 E---------------------------------MLNKDLVAWNSIIDCLVCCGKYNEAL 177
+ + ++D+VAW ++I G Y EA+
Sbjct: 339 QRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAI 398
Query: 178 DFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI--TSVSNSLV 235
+ F MV G RP+ T LS ++ +L+ G+ +H ++ GEI SVSN+L+
Sbjct: 399 NLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS---GEIYSVSVSNALI 455
Query: 236 DMYAKCGAVEEAYEIFRSMK-GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
MYAK G + A F ++ ++ +SW +MI+ LA HG+ EAL LF ML E + RPD
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL-RPD 514
Query: 295 GITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILI 354
IT++GV AC+H G V++GR+YFD+M + PT+ HY CMVDL GRAGL++EA I
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 355 KNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWN 414
+ MP+E + + W SLL+ACR H N+ L + + LL LEP +S Y LAN+Y++ G+W
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 415 EMSKERRSMQERGVKKPEPGNSFV 438
E +K R+SM++ VKK E G S++
Sbjct: 635 EAAKIRKSMKDGRVKK-EQGFSWI 657
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 188/440 (42%), Gaps = 98/440 (22%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFS 95
GDM+ FD++ + D+ W TMI G+ N Q KA+ M ++G + P FT +
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG---IEPTQFTLT 150
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYG---------------VMK 140
+L V + GK++H +KLG+ + V NSL++MY V++
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 141 DIET----------------AHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
DI + A FE+M +D+V WNS+I G ALD F++M+
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 185 Q-SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS-VSNSLVDMYAKCG 242
+ S + PD T LSAC + L G+ +HS I + +I+ V N+L+ MY++CG
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF--DISGIVLNALISMYSRCG 328
Query: 243 AVE---------------------------------EAYEIFRSMKGKNVISWNTMILGL 269
VE +A IF S+K ++V++W MI+G
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS-----------HGGFVDEGRRYF 318
HG+ EA+ LF M+ RP+ T +L S HG V G Y
Sbjct: 389 EQHGSYGEAINLFRSMVGGG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY- 446
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN 378
+V ++ + +AG + A + E + + W S++ A HG+
Sbjct: 447 -----------SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 379 VKLA-EKVRKHLLE-LEPCH 396
+ A E L+E L P H
Sbjct: 496 AEEALELFETMLMEGLRPDH 515
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 126/259 (48%), Gaps = 35/259 (13%)
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
N+++ Y D+++ + F+++ +D V+W ++I G+Y++A+ MV+ G+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC-------- 241
P T L++ A + G+ VHS I + G + SVSNSL++MYAKC
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNV-SVSNSLLNMYAKCGDPMMAKF 202
Query: 242 -----------------------GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEA 278
G ++ A F M +++++WN+MI G G A
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 279 LTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCM 337
L +F++ML+++++ PD T VL AC++ + G++ + I++ +++ V +
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNAL 320
Query: 338 VDLLGRAGLVEEAYILIKN 356
+ + R G VE A LI+
Sbjct: 321 ISMYSRCGGVETARRLIEQ 339
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 237/416 (56%), Gaps = 22/416 (5%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
+G ++ A +FD D F W M+ G+ E+A + +M P+ S
Sbjct: 263 SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM--------PERNEVS 314
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVR--NSLIHMYGVMKDIETAHQLFEEML 153
+ + G V G+++ + V +V N++I Y I A LF++M
Sbjct: 315 WNAMLAG----YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
+D V+W ++I G EAL F +M + G R + ++F LS C + AL G+
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG 273
+H + + Y V N+L+ MY KCG++EEA ++F+ M GK+++SWNTMI G + HG
Sbjct: 431 LHGRLVKGGYETGCF-VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 274 NGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKH 333
G AL F M +E + +PD T + VL ACSH G VD+GR+YF M++DY V P +H
Sbjct: 490 FGEVALRFFESMKREGL-KPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQH 548
Query: 334 YGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELE 393
Y CMVDLLGRAGL+E+A+ L+KNMP E +A +W +LL A R HGN +LAE + +E
Sbjct: 549 YACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAME 608
Query: 394 PCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLENET 449
P +S YVLL+N+YAS+G+W ++ K R M+++GVKK PG S+ I ++N+T
Sbjct: 609 PENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKV-PGYSW-----IEIQNKT 658
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 153/372 (41%), Gaps = 55/372 (14%)
Query: 38 DMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFL 97
++ A +F+ + + D WNTM+ G+ + A + RM + + +++ L
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE------KNDVSWNAL 194
Query: 98 LKIVGGLGSVVLGKQLHCSTLKLGVENHAHVR-NSLIHMYGVMKDIETAHQLFEEMLNKD 156
L V K L EN A V N L+ + K I A Q F+ M +D
Sbjct: 195 LS-----AYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD 249
Query: 157 LVAWNSIIDCLVCCGKYNEALDFF--------------------TRMVQSGMRPDDATFV 196
+V+WN+II GK +EA F RMV+ D
Sbjct: 250 VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 197 VTLSACGAMGALAFGRWVHSCIQRATYLGEI-----TSVSNSLVDMYAKCGAVEEAYEIF 251
+ AM A G ++ A L ++ S N+++ YA+CG + EA +F
Sbjct: 310 RNEVSWNAMLA---GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 252 RSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFV 311
M ++ +SW MI G + G+ EAL LF +M +E R + +F L C+ +
Sbjct: 367 DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG-GRLNRSSFSSALSTCADVVAL 425
Query: 312 DEGRR-YFDIMSRDYNVQPTVKHYGCMVD-----LLGRAGLVEEAYILIKNMPMECNAIV 365
+ G++ + ++ Y GC V + + G +EEA L K M + + +
Sbjct: 426 ELGKQLHGRLVKGGYET-------GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVS 477
Query: 366 WRSLLAACRTHG 377
W +++A HG
Sbjct: 478 WNTMIAGYSRHG 489
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 137/349 (39%), Gaps = 55/349 (15%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL--GSVVLGKQLH 114
WN I + T + +A+ +KRM P + S+ I G L G L ++L
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRM--------PRWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 115 CSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYN 174
E N +I Y +++ A +LFE M +D+ +WN+++ G +
Sbjct: 119 DEM----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 175 EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSL 234
+A F RM + +D ++ LSA + + +C+ + N L
Sbjct: 175 DARSVFDRMPEK----NDVSWNALLSA-----YVQNSKMEEACMLFKSRENWALVSWNCL 225
Query: 235 VDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
+ + K + EA + F SM ++V+SWNT+I G A G EA LF E ++V
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV---- 281
Query: 295 GITFLGVLCACSHGGFVDEGRRYFDIMSRD------------------------YNVQP- 329
T+ ++ V+E R FD M ++V P
Sbjct: 282 -FTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPC 340
Query: 330 -TVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
V + M+ + G + EA L MP + + W +++A G
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKR-DPVSWAAMIAGYSQSG 388
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 239/421 (56%), Gaps = 29/421 (6%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A VFD + + DA WN +I + + + + M + + PD FTF +LK
Sbjct: 436 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR--SRIEPDEFTFGSILKAC 493
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMY---GVMKDIETAHQLF--------- 149
G GS+ G ++H S +K G+ +++ V SLI MY G++++ E H F
Sbjct: 494 TG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT 552
Query: 150 ----EEMLNKDL----VAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA 201
E+M NK L V+WNSII V + +A FTRM++ G+ PD T+ L
Sbjct: 553 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 612
Query: 202 CGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVIS 261
C + + G+ +H+ + + ++ + ++LVDMY+KCG + ++ +F ++ ++
Sbjct: 613 CANLASAGLGKQIHAQVIKKELQSDVY-ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT 671
Query: 262 WNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIM 321
WN MI G A HG G EA+ LF M+ EN+ +P+ +TF+ +L AC+H G +D+G YF +M
Sbjct: 672 WNAMICGYAHHGKGEEAIQLFERMILENI-KPNHVTFISILRACAHMGLIDKGLEYFYMM 730
Query: 322 SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTH-GNVK 380
RDY + P + HY MVD+LG++G V+ A LI+ MP E + ++WR+LL C H NV+
Sbjct: 731 KRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVE 790
Query: 381 LAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVK-KPEPGNSFVG 439
+AE+ LL L+P SS Y LL+N+YA G W ++S RR+M RG K K EPG S+V
Sbjct: 791 VAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM--RGFKLKKEPGCSWVE 848
Query: 440 L 440
L
Sbjct: 849 L 849
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 193/414 (46%), Gaps = 34/414 (8%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++HA ++ F + +V + A +M A +FD + + +N MI G+
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYA---KCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
KA+L + R+ + D + S + + + + G Q++ +K +
Sbjct: 359 QEEHGFKALLLFHRLMS--SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
V N+ I MYG + + A ++F+EM +D V+WN+II GK E L F M++
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 476
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
S + PD+ TF L AC G+L +G +HS I ++ + +SV SL+DMY+KCG +E
Sbjct: 477 SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG-MASNSSVGCSLIDMYSKCGMIE 534
Query: 246 EAYEIF-RSMKGKNV-------------------ISWNTMILGLASHGNGTEALTLFAEM 285
EA +I R + NV +SWN++I G +A LF M
Sbjct: 535 EAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 594
Query: 286 LQENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRA 344
++ + PD T+ VL C++ G++ + ++ ++ +Q V +VD+ +
Sbjct: 595 MEMGIT-PDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYICSTLVDMYSKC 651
Query: 345 GLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV--RKHLLELEPCH 396
G + ++ ++ + + + + W +++ HG + A ++ R L ++P H
Sbjct: 652 GDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 704
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 179/402 (44%), Gaps = 36/402 (8%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K+ HA + +GF V+ ++ V + D A VFD++ D WN MI G+
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLL---QVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGY 124
Query: 65 GNTNQPEKAVLFYKRM----------------QQGEPHVVPDTF-------------TFS 95
+N KA F+ M Q GE + F TF+
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
+LK+ L LG Q+H +++G + ++L+ MY K + ++F+ + K
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
+ V+W++II V + AL FF M + + + L +C A+ L G +H
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
+ ++ + + V + +DMYAKC +++A +F + + N S+N MI G + +G
Sbjct: 305 AHALKSDFAAD-GIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
+AL LF ++ + D I+ GV AC+ + EG + + + + ++ V
Sbjct: 364 FKALLLFHRLMSSG-LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS-SLSLDVCVAN 421
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
+D+ G+ + EA+ + M +A+ W +++AA +G
Sbjct: 422 AAIDMYGKCQALAEAFRVFDEMRRR-DAVSWNAIIAAHEQNG 462
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 36/298 (12%)
Query: 91 TFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFE 150
T FSF+ K G++ LGKQ H + G V N L+ +Y +D +A +F+
Sbjct: 48 TTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD 107
Query: 151 EMLNKDLVAWNSII-------DCLVCCGKYN------------------------EALDF 179
+M +D+V+WN +I D +N ++++
Sbjct: 108 KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEV 167
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
F M + G+ D TF + L C + + G +H + R ++ + S +L+DMYA
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAAS-ALLDMYA 226
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
K E+ +F+ + KN +SW+ +I G + + AL F EM + N I +
Sbjct: 227 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YA 285
Query: 300 GVLCACSHGGFVD-EGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
VL +C+ + G+ + + D+ V+ +D+ + +++A IL N
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVR--TATLDMYAKCDNMQDAQILFDN 341
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 53/254 (20%)
Query: 176 ALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
+ +FT + F C GAL G+ H+ + + + T V N L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGF-RPTTFVLNCLL 90
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLA------------------------- 270
+Y A +F M ++V+SWN MI G +
Sbjct: 91 QVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNS 150
Query: 271 ------SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRD 324
+G +++ +F +M +E + DG TF +L CS + + S
Sbjct: 151 MLSGYLQNGESLKSIEVFVDMGREG-IEFDGRTFAIILKVCS----------FLEDTSLG 199
Query: 325 YNVQPTVKHYGCMVDLLGRAGLVE---------EAYILIKNMPMECNAIVWRSLLAACRT 375
+ V GC D++ + L++ E+ + + +P E N++ W +++A C
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQ 258
Query: 376 HGNVKLAEKVRKHL 389
+ + LA K K +
Sbjct: 259 NNLLSLALKFFKEM 272
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 226/387 (58%), Gaps = 7/387 (1%)
Query: 53 DAFLWNTMIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
D WN M+ G+ ++ K + + M +QGE D FT + + K G L ++ GK
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER---SDDFTLATVFKTCGFLFAINQGK 537
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCG 171
Q+H +K G + V + ++ MY D+ A F+ + D VAW ++I + G
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS 231
+ A F++M G+ PD+ T A + AL GR +H+ + + V
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND-PFVG 656
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
SLVDMYAKCG++++AY +F+ ++ N+ +WN M++GLA HG G E L LF +M + +
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM-KSLGI 715
Query: 292 RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAY 351
+PD +TF+GVL ACSH G V E ++ M DY ++P ++HY C+ D LGRAGLV++A
Sbjct: 716 KPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAE 775
Query: 352 ILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTG 411
LI++M ME +A ++R+LLAACR G+ + ++V LLELEP SS YVLL+NMYA+
Sbjct: 776 NLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAAS 835
Query: 412 QWNEMSKERRSMQERGVKKPEPGNSFV 438
+W+EM R M+ VKK +PG S++
Sbjct: 836 KWDEMKLARTMMKGHKVKK-DPGFSWI 861
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 189/396 (47%), Gaps = 13/396 (3%)
Query: 41 YAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKI 100
+A +VFD + + D WN++I G +AV + MQ + PD +T + +LK
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF--MQLLRCGLKPDQYTMTSVLKA 425
Query: 101 VGGLGS-VVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVA 159
L + L KQ+H +K+ + + V +LI Y + ++ A LFE N DLVA
Sbjct: 426 ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVA 484
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
WN+++ ++ L F M + G R DD T CG + A+ G+ VH+
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
++ Y ++ VS+ ++DMY KCG + A F S+ + ++W TMI G +G A
Sbjct: 545 KSGYDLDLW-VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMV 338
+F++M V+ PD T + A S +++GR+ + + + + P V +V
Sbjct: 604 HVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLV 660
Query: 339 DLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHL--LELEPCH 396
D+ + G +++AY L K + M N W ++L HG K ++ K + L ++P
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP-D 718
Query: 397 SSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPE 432
++ + + + +G +E K RSM KPE
Sbjct: 719 KVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 150/296 (50%), Gaps = 8/296 (2%)
Query: 84 EPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIE 143
E V D TF +L + S+ LG+Q+HC LKLG++ V NSLI+MY ++
Sbjct: 308 ESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG 367
Query: 144 TAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACG 203
A +F+ M +DL++WNS+I + G EA+ F ++++ G++PD T L A
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Query: 204 AMG-ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISW 262
++ L+ + VH + + + + VS +L+D Y++ ++EA EI ++++W
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSD-SFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAW 485
Query: 263 NTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIM 321
N M+ G +G + L LFA M ++ R D T V C +++G++ + +
Sbjct: 486 NAMMAGYTQSHDGHKTLKLFALMHKQG-ERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 322 SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
Y++ V ++D+ + G + A ++P+ + + W ++++ C +G
Sbjct: 545 KSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVP-DDVAWTTMISGCIENG 597
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 171 GKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV 230
G+Y+ L F MV+S + D TF++ L+ + +LA G+ VH C+ L + +V
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVH-CMALKLGLDLMLTV 352
Query: 231 SNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
SNSL++MY K A +F +M +++ISWN++I G+A +G EA+ LF ++L+
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG- 411
Query: 291 VRPDGITFLGVLCACS 306
++PD T VL A S
Sbjct: 412 LKPDQYTMTSVLKAAS 427
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K HARI + ++ +I ++ G + YA VFD++ D WN+++ +
Sbjct: 59 KCTHARILTFEENPERFLINNLI---SMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 65 GNTNQ-----PEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+++ ++A L ++ ++Q V T S +LK+ G V + H K
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDV--VYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
+G++ V +L+++Y ++ LFEEM +D+V WN ++ + G EA+D
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 180 FTRMVQSGMRPDDATF 195
+ SG+ P++ T
Sbjct: 234 SSAFHSSGLNPNEITL 249
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
F FL + ++LGK H L + N+LI MY + A ++F++M
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 154 NKDLVAWNSII-------DCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG 206
++DLV+WNSI+ +C+V +A F + Q + T L C G
Sbjct: 102 DRDLVSWNSILAAYAQSSECVV--ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMI 266
+ H + G+ V+ +LV++Y K G V+E +F M ++V+ WN M+
Sbjct: 160 YVWASESFHGYACKIGLDGD-EFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLML 218
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
G EA+ L + + + P+ IT
Sbjct: 219 KAYLEMGFKEEAIDL-SSAFHSSGLNPNEITL 249
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG-----NGTEALTLFAEML 286
N+L+ MY+KCG++ A +F M ++++SWN+++ A N +A LF +L
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF-RIL 136
Query: 287 QENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGL 346
+++VV +T +L C H G+V + + + G +V++ + G
Sbjct: 137 RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK-IGLDGDEFVAGALVNIYLKFGK 195
Query: 347 VEEAYILIKNMPMECNAIVWRSLLAA 372
V+E +L + MP + ++W +L A
Sbjct: 196 VKEGKVLFEEMPYR-DVVLWNLMLKA 220
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/411 (37%), Positives = 232/411 (56%), Gaps = 6/411 (1%)
Query: 29 FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVV 88
C + G +N A VFD++++PD WN +I G N ++AV + +M+ +
Sbjct: 311 LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG--FI 368
Query: 89 PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQL 148
PD + LL ++ G Q+H +K G V NSL+ MY D+ L
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 149 FEEMLNK-DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
FE+ N D V+WN+I+ + + E L F M+ S PD T L C + +
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 208 LAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMIL 267
L G VH C T L + N L+DMYAKCG++ +A IF SM ++V+SW+T+I+
Sbjct: 489 LKLGSQVH-CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 268 GLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNV 327
G A G G EAL LF EM + + P+ +TF+GVL ACSH G V+EG + + M ++ +
Sbjct: 548 GYAQSGFGEEALILFKEM-KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRK 387
PT +H C+VDLL RAG + EA I M +E + +VW++LL+AC+T GNV LA+K +
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
Query: 388 HLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
++L+++P +S+ +VLL +M+AS+G W + R SM++ VKK PG S++
Sbjct: 667 NILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKI-PGQSWI 716
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 181/382 (47%), Gaps = 30/382 (7%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G + A VFD + + + + ++I G+ Q +A+ Y +M Q + +VPD F F
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED--LVPDQFAFGS 173
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
++K V LGKQLH +KL +H +N+LI MY + A ++F + KD
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGM-RPDDATFVVTLSACGAMGALAFGRWVH 215
L++W+SII G EAL M+ G+ P++ F +L AC ++ +G +H
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
++ G + SL DMYA+CG + A +F ++ + SWN +I GLA++G
Sbjct: 294 GLCIKSELAGNAIA-GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYA 352
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
EA+++F++M + PD I+ +LCA + + +G + + + +G
Sbjct: 353 DEAVSVFSQMRSSGFI-PDAISLRSLLCAQTKPMALSQGMQ----------IHSYIIKWG 401
Query: 336 CMVD------LLGRAGLVEEAYI---LIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVR 386
+ D LL + Y L ++ +++ W ++L AC H ++
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 387 KHLL--ELEPCHSSDYVLLANM 406
K +L E EP D++ + N+
Sbjct: 462 KLMLVSECEP----DHITMGNL 479
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 177/417 (42%), Gaps = 54/417 (12%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K++HA++ + +HL+ ++ A+ V M+ A VF + D W+++I GF
Sbjct: 188 KQLHAQVIKLE-SSSHLIAQNALI--AMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 65 GNTNQPEKAVLFYKRMQQ-GEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+A+ K M G H P+ + F LK L G Q+H +K +
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFH--PNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELA 302
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+A SL MY + +A ++F+++ D +WN II L G +EA+ F++M
Sbjct: 303 GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
SG PD + L A AL+ G +HS I + +L ++T V NSL+ MY C
Sbjct: 363 RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT-VCNSLLTMYTFCSD 421
Query: 244 VEEAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ + +F + + +SWNT++ H E L LF ML PD IT +L
Sbjct: 422 LYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE-CEPDHITMGNLL 480
Query: 303 CACSH--------------------------GGFVD---------EGRRYFDIM-SRDYN 326
C G +D + RR FD M +RD
Sbjct: 481 RGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRD-- 538
Query: 327 VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP---MECNAIVWRSLLAACRTHGNVK 380
V + ++ ++G EEA IL K M +E N + + +L AC G V+
Sbjct: 539 ----VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE 591
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 44/305 (14%)
Query: 106 SVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIID 165
S+ G+++H L + + N ++ MYG + A ++F+ M ++LV++ S+I
Sbjct: 82 SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 141
Query: 166 CLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLG 225
G+ EA+ + +M+Q + PD F + AC + + G+ +H+ + +
Sbjct: 142 GYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSS 201
Query: 226 EITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEM 285
+ + N+L+ MY + + +A +F + K++ISW+++I G + G EAL+ EM
Sbjct: 202 HLIA-QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260
Query: 286 LQENVVRPDGITFLGVLCACS-----------HG------------------------GF 310
L V P+ F L ACS HG GF
Sbjct: 261 LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGF 320
Query: 311 VDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME---CNAIVWR 367
++ RR FD + R P + ++ L G +EA + M +AI R
Sbjct: 321 LNSARRVFDQIER-----PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 368 SLLAA 372
SLL A
Sbjct: 376 SLLCA 380
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 125/252 (49%), Gaps = 5/252 (1%)
Query: 161 NSIIDCLVCCGKYNEALDFFT-RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
N I+ L Y EAL+ F S + T++ + AC + +LA GR +H I
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
+ + T ++N ++ MY KCG++ +A E+F M +N++S+ ++I G + +G G EA+
Sbjct: 95 NSNCKYD-TILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAI 153
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
L+ +MLQE++V PD F ++ AC+ V G++ + + + + ++
Sbjct: 154 RLYLKMLQEDLV-PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ-NALIA 211
Query: 340 LLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD 399
+ R + +A + +PM+ + I W S++A G A K +L H ++
Sbjct: 212 MYVRFNQMSDASRVFYGIPMK-DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNE 270
Query: 400 YVLLANMYASTG 411
Y+ +++ A +
Sbjct: 271 YIFGSSLKACSS 282
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 252/447 (56%), Gaps = 14/447 (3%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ +K++ + G Q+ + +++ CA+S P GD+++AV +F + KP WN +
Sbjct: 16 FSQIKQLQSHFLTAGHFQSSFLRSRLLERCAIS-PFGDLSFAVQIFRYIPKPLTNDWNAI 74
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVP----DTFTFSFLLKIVGGLGSVVLGKQLHCS 116
IRGF ++ P A +Y+ M Q D T SF LK QLHC
Sbjct: 75 IRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQ 134
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
+ G+ + + +L+ Y D+ +A++LF+EM +D+ +WN++I LV + +EA
Sbjct: 135 INRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEA 194
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
++ + RM G+R + T V L AC +G + G + Y + VSN+ +D
Sbjct: 195 MELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH-----GYSNDNVIVSNAAID 249
Query: 237 MYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDG 295
MY+KCG V++AY++F GK +V++WNTMI G A HG AL +F + L++N ++PD
Sbjct: 250 MYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIF-DKLEDNGIKPDD 308
Query: 296 ITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIK 355
+++L L AC H G V+ G F+ M+ V+ +KHYGC+VDLL RAG + EA+ +I
Sbjct: 309 VSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIIC 367
Query: 356 NMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNE 415
+M M + ++W+SLL A + +V++AE + + E+ + D+VLL+N+YA+ G+W +
Sbjct: 368 SMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKD 427
Query: 416 MSKERRSMQERGVKKPEPGNSFVGLPG 442
+ + R M+ + VKK PG S++ G
Sbjct: 428 VGRVRDDMESKQVKKI-PGLSYIEAKG 453
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 275 bits (702), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 238/434 (54%), Gaps = 13/434 (2%)
Query: 6 EIHARIYQTG-FHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+IH+ +TG + ++++ G F ++ G + ++F KPD +N MI G+
Sbjct: 242 QIHSLATKTGCYSHDYVLTG----FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ + E ++ +K + + T L+ +V G ++L +H LK +
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSST-----LVSLVPVSGHLMLIYAIHGYCLKSNFLS 352
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
HA V +L +Y + +IE+A +LF+E K L +WN++I G +A+ F M
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+S P+ T LSAC +GAL+ G+WVH ++ + I VS +L+ MYAKCG++
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY-VSTALIGMYAKCGSI 471
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
EA +F M KN ++WNTMI G HG G EAL +F EML + P +TFL VL A
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT-PTPVTFLCVLYA 530
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CSH G V EG F+ M Y +P+VKHY CMVD+LGRAG ++ A I+ M +E +
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS 590
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
VW +LL ACR H + LA V + L EL+P + +VLL+N++++ + + + R++ +
Sbjct: 591 VWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAK 650
Query: 425 ERGVKKPEPGNSFV 438
+R + K PG + +
Sbjct: 651 KRKLAKA-PGYTLI 663
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 159/337 (47%), Gaps = 8/337 (2%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A VFDR+ + D LWNTMI G+ +++ ++ + E DT T +L V
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN-ESCTRLDTTTLLDILPAV 231
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWN 161
L + LG Q+H K G +H +V I +Y I+ LF E D+VA+N
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYN 291
Query: 162 SIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRA 221
++I G+ +L F ++ SG R +T V S G L +H ++
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGARLRSSTLV---SLVPVSGHLMLIYAIHGYCLKS 348
Query: 222 TYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTL 281
+L SVS +L +Y+K +E A ++F K++ SWN MI G +G +A++L
Sbjct: 349 NFLSH-ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISL 407
Query: 282 FAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
F EM Q++ P+ +T +L AC+ G + G+ D++ R + + ++ ++ +
Sbjct: 408 FREM-QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV-RSTDFESSIYVSTALIGMY 465
Query: 342 GRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN 378
+ G + EA L M + N + W ++++ HG
Sbjct: 466 AKCGSIAEARRLFDLMTKK-NEVTWNTMISGYGLHGQ 501
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 197/457 (43%), Gaps = 52/457 (11%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
++HL + HA+I GF + ++ K+ + G + YA +F V +PD FL+N +
Sbjct: 33 ISHLAQTHAQIILHGFRNDISLLTKLTQRLS---DLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
+RGF P ++ + +++ + P++ T++F + G G+ +H +
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKS-TDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
G ++ + ++++ MY +E A ++F+ M KD + WN++I Y E++ F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 181 TRMV-QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS--VSNSLVDM 237
++ +S R D T + L A + L G +HS AT G + V + +
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSL---ATKTGCYSHDYVLTGFISL 265
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAE-MLQENVVRPDGI 296
Y+KCG ++ +FR + +++++N MI G S+G +L+LF E ML +R +
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 297 TFL-----------GVLCACSHGGF-------------------VDEGRRYFDIMSRDYN 326
L + C F ++ R+ F D +
Sbjct: 326 VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF-----DES 380
Query: 327 VQPTVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAE 383
+ ++ + M+ + GL E+A L + M N + +L+AC G + L +
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 384 KVRKHLLELEPCHSSDYV--LLANMYASTGQWNEMSK 418
V L+ SS YV L MYA G E +
Sbjct: 441 WVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 243/435 (55%), Gaps = 11/435 (2%)
Query: 12 YQTGFHQNHLVVGKIIVFCAVSVPA------GDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
Y H + +V G + C + A G+M + +F+ + + D W ++I +
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
Q KAV + +M+ + V P+ TF+ + L +V G+QLHC+ L LG+ +
Sbjct: 287 RIGQEVKAVETFIKMRNSQ--VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS 344
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
V NS++ MY ++ +A LF+ M +D+++W++II G E +F+ M Q
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
SG +P D LS G M + GR VH+ + L + ++V +SL++MY+KCG+++
Sbjct: 405 SGTKPTDFALASLLSVSGNMAVIEGGRQVHA-LALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
EA IF +++S MI G A HG EA+ LF + L+ RPD +TF+ VL AC
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGF-RPDSVTFISVLTAC 522
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
+H G +D G YF++M YN++P +HYGCMVDLL RAG + +A +I M + + +V
Sbjct: 523 THSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV 582
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
W +LL AC+ G+++ + + +LEL+P ++ V LAN+Y+STG E + R++M+
Sbjct: 583 WTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKA 642
Query: 426 RGVKKPEPGNSFVGL 440
+GV K EPG S + +
Sbjct: 643 KGVIK-EPGWSSIKI 656
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 177/339 (52%), Gaps = 8/339 (2%)
Query: 34 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
+ AG++ A VFD++ D W ++I+ + N ++A++ + M+ + V PDT
Sbjct: 51 INAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
S +LK G ++ G+ LH +K + + +V +SL+ MY + I+ + ++F EM
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
++ V W +II LV G+Y E L +F+ M +S D TF + L AC + + +G+
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG 273
+H+ + ++ + V+NSL MY +CG +++ +F +M ++V+SW ++I+ G
Sbjct: 231 IHTHVIVRGFVTTLC-VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 274 NGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVK 332
+A+ F +M + + V P+ TF + AC+ + G + + +++S N +V
Sbjct: 290 QEVKAVETFIKM-RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS 348
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV-WRSLL 370
+ M+ + G + A +L + M C I+ W +++
Sbjct: 349 N--SMMKMYSTCGNLVSASVLFQG--MRCRDIISWSTII 383
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEM-LQENV 290
NS + G + A ++F M +++SW ++I + N EAL LF+ M + ++
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 291 VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
V PD VL AC + G + ++ +V ++D+ R G ++++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGES-LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 351 YILIKNMPMECNAIVWRSLLAACRTHGNVK 380
+ MP NA+ W +++ G K
Sbjct: 163 CRVFSEMPFR-NAVTWTAIITGLVHAGRYK 191
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 241/479 (50%), Gaps = 54/479 (11%)
Query: 1 MNHLKEIHARIYQTG-----FHQNHLVVGKIIVFCAVSVPAGD----MNYAVSVFDRVDK 51
+ HL + HA+ +G F QN + + ++S A ++YA SVF +
Sbjct: 17 LKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITN 76
Query: 52 PDAFLWNTMIRGFGNTNQPEK--AVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL--GSV 107
P F +NT+IR ++P + F+ M++ V PD TF F+ K G +
Sbjct: 77 PSTFCFNTIIR-ICTLHEPSSLSSKRFFVEMRRRS--VPPDFHTFPFVFKACAAKKNGDL 133
Query: 108 VLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE---------------- 151
L K LHC L+ G+ + N+LI +Y ++ I++A QLF+E
Sbjct: 134 TLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGL 193
Query: 152 ---------------MLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFV 196
M +DLV+WNS+I EA+ F MV G++PD+ V
Sbjct: 194 VKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIV 253
Query: 197 VTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKG 256
TLSAC G G+ +H +R + + ++ LVD YAKCG ++ A EIF
Sbjct: 254 STLSACAQSGDWQKGKAIHDYTKRKRLFID-SFLATGLVDFYAKCGFIDTAMEIFELCSD 312
Query: 257 KNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR 316
K + +WN MI GLA HGNG + F +M+ + +PDG+TF+ VL CSH G VDE R
Sbjct: 313 KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGI-KPDGVTFISVLVGCSHSGLVDEARN 371
Query: 317 YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC----NAIVWRSLLAA 372
FD M Y+V +KHYGCM DLLGRAGL+EEA +I+ MP + + W LL
Sbjct: 372 LFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGG 431
Query: 373 CRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM-QERGVKK 430
CR HGN+++AEK + L P Y ++ MYA+ +W E+ K R + +++ VKK
Sbjct: 432 CRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKK 490
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 274 bits (701), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 244/445 (54%), Gaps = 13/445 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K+ H + + G+ + V +IV + G + A VFD + K + W +MIRG+
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYST---CGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF-LLKIVGGLGSVV---LGKQLHCSTLKL 120
AV +K + E F S L+ ++ V L + +H +K
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212
Query: 121 GVENHAHVRNSLIHMY--GVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
G + V N+L+ Y G + A ++F+++++KD V++NSI+ G NEA +
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFE 272
Query: 179 FFTRMVQSGMRPDDA-TFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
F R+V++ + +A T L A GAL G+ +H + R ++ V S++DM
Sbjct: 273 VFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI-VGTSIIDM 331
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
Y KCG VE A + F MK KNV SW MI G HG+ +AL LF M+ V RP+ IT
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV-RPNYIT 390
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
F+ VL ACSH G EG R+F+ M + V+P ++HYGCMVDLLGRAG +++AY LI+ M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 358 PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMS 417
M+ ++I+W SLLAACR H NV+LAE L EL+ + Y+LL+++YA G+W ++
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 418 KERRSMQERGVKKPEPGNSFVGLPG 442
+ R M+ RG+ KP PG S + L G
Sbjct: 511 RVRMIMKNRGLVKP-PGFSLLELNG 534
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 178/388 (45%), Gaps = 28/388 (7%)
Query: 22 VVGKIIVFCAVSVPAGDMNYA-----VSVFDR-VDKPDAFLWNTMIRGFGNTNQPEKAVL 75
V K +FC+VS + ++F+R VDK D F WN++I + +A+L
Sbjct: 3 VRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALL 62
Query: 76 FYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHM 135
+ M++ + P +F +K L + GKQ H G ++ V ++LI M
Sbjct: 63 AFSSMRK--LSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120
Query: 136 YGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATF 195
Y +E A ++F+E+ +++V+W S+I G +A+ F ++ DDA F
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF 180
Query: 196 ------VVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAKC--GAVEE 246
V +SAC + A +HS I+R G SV N+L+D YAK G V
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG--VSVGNTLLDAYAKGGEGGVAV 238
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
A +IF + K+ +S+N+++ A G EA +F +++ VV + IT VL A S
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVW 366
H G + G+ D + R ++ V ++D+ + G VE A M + N W
Sbjct: 299 HSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSW 356
Query: 367 RSLLAACRTHGNVKLAEKVRKHLLELEP 394
+++A HG+ A LEL P
Sbjct: 357 TAMIAGYGMHGHAAKA-------LELFP 377
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 258/435 (59%), Gaps = 10/435 (2%)
Query: 5 KEIHARIYQTGFHQNHLV-VGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
K +H +I +T + + V VG + ++ + GDM+ A VF+ + K D W+ MI
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQL----GDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
F +AV + RM+ E VVP+ FT S +L LG+QLH +K+G +
Sbjct: 323 FCQNGFCNEAVDLFIRMR--EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+V N+LI +Y + ++TA +LF E+ +K+ V+WN++I G+ +A F
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
+++ + + TF L AC ++ ++ G VH + ++ +VSNSL+DMYAKCG
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKV-AVSNSLIDMYAKCGD 499
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
++ A +F M+ +V SWN +I G ++HG G +AL + +++++ +P+G+TFLGVL
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL-DIMKDRDCKPNGLTFLGVLS 558
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
CS+ G +D+G+ F+ M RD+ ++P ++HY CMV LLGR+G +++A LI+ +P E +
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSV 618
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
++WR++L+A N + A + + +L++ P + YVL++NMYA QW ++ R+SM
Sbjct: 619 MIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSM 678
Query: 424 QERGVKKPEPGNSFV 438
+E GVKK EPG S++
Sbjct: 679 KEMGVKK-EPGLSWI 692
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 149/304 (49%), Gaps = 11/304 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K IH I + G + L + + V AG A+++FD + + + + T+ +G+
Sbjct: 69 KAIHCDILKKG---SCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY 125
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ + Y R+ + + P FT SFL K+ L + LH +KLG ++
Sbjct: 126 A----CQDPIGLYSRLHREGHELNPHVFT-SFL-KLFVSLDKAEICPWLHSPIVKLGYDS 179
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+A V +LI+ Y V +++A +FE +L KD+V W I+ C V G + ++L + M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+G P++ TF L A +GA F + VH I + Y+ + V L+ +Y + G +
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD-PRVGVGLLQLYTQLGDM 298
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
+A+++F M +V+ W+ MI +G EA+ LF M +E V P+ T +L
Sbjct: 299 SDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVPNEFTLSSILNG 357
Query: 305 CSHG 308
C+ G
Sbjct: 358 CAIG 361
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 124/293 (42%), Gaps = 12/293 (4%)
Query: 82 QGEPHVVP--DTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVM 139
+ ++P D+ + +L+ + K +HC LK G N L++ Y
Sbjct: 38 ESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKA 97
Query: 140 KDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTL 199
+ A LF+EM ++ V++ ++ C + + ++R+ + G + F L
Sbjct: 98 GFDKDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFL 153
Query: 200 SACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV 259
++ W+HS I + Y V +L++ Y+ CG+V+ A +F + K++
Sbjct: 154 KLFVSLDKAEICPWLHSPIVKLGYDSN-AFVGAALINAYSVCGSVDSARTVFEGILCKDI 212
Query: 260 ISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR-YF 318
+ W ++ +G ++L L + M + P+ TF L A G D + +
Sbjct: 213 VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM-PNNYTFDTALKASIGLGAFDFAKGVHG 271
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
I+ Y + P V ++ L + G + +A+ + MP + + W ++A
Sbjct: 272 QILKTCYVLDPRVGV--GLLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMIA 321
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 274 bits (700), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 230/405 (56%), Gaps = 45/405 (11%)
Query: 34 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
V AG++ A +FD + + D WNTM+ G+ + KA +++M P+ T
Sbjct: 196 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM--------PERNT 247
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
S+ ST+ +G Y D+E A +F++M
Sbjct: 248 VSW-------------------STMVMG--------------YSKAGDMEMARVMFDKMP 274
Query: 154 --NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFG 211
K++V W II G EA +MV SG++ D A + L+AC G L+ G
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG 334
Query: 212 RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLAS 271
+HS ++R+ LG V N+L+DMYAKCG +++A+++F + K+++SWNTM+ GL
Sbjct: 335 MRIHSILKRSN-LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGV 393
Query: 272 HGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTV 331
HG+G EA+ LF+ M +E + RPD +TF+ VLC+C+H G +DEG YF M + Y++ P V
Sbjct: 394 HGHGKEAIELFSRMRREGI-RPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQV 452
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
+HYGC+VDLLGR G ++EA +++ MPME N ++W +LL ACR H V +A++V +L++
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVK 512
Query: 392 LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNS 436
L+PC +Y LL+N+YA+ W ++ R M+ GV+KP +S
Sbjct: 513 LDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASS 557
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 189/387 (48%), Gaps = 23/387 (5%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+N +K++HA+I + H++ + K+I A+S+ N AV VF++V +P+ L N++
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLI--SALSL-CRQTNLAVRVFNQVQEPNVHLCNSL 88
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
IR +QP +A + MQ+ + D FT+ FLLK G + + K +H KL
Sbjct: 89 IRAHAQNSQPYQAFFVFSEMQRF--GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL 146
Query: 121 GVENHAHVRNSLIHMYGVMK--DIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
G+ + +V N+LI Y + A +LFE+M +D V+WNS++ LV G+ +A
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM- 237
F M Q + +S + A R + + + E +VS S + M
Sbjct: 207 LFDEMPQRDL----------ISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMG 256
Query: 238 YAKCGAVEEAYEIFRSM--KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDG 295
Y+K G +E A +F M KNV++W +I G A G EA L +M+ ++ D
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG-LKFDA 315
Query: 296 ITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIK 355
+ +L AC+ G + G R I+ R N+ ++D+ + G +++A+ +
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRS-NLGSNAYVLNALLDMYAKCGNLKKAFDVFN 374
Query: 356 NMPMECNAIVWRSLLAACRTHGNVKLA 382
++P + + + W ++L HG+ K A
Sbjct: 375 DIPKK-DLVSWNTMLHGLGVHGHGKEA 400
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 14/278 (5%)
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCC 170
KQLH ++ + H+ LI + + A ++F ++ ++ NS+I
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 171 GKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV 230
+ +A F+ M + G+ D+ T+ L AC L + +H+ I++ +I V
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIY-V 154
Query: 231 SNSLVDMYAKCG--AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQE 288
N+L+D Y++CG V +A ++F M ++ +SWN+M+ GL G +A LF EM Q
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR 214
Query: 289 NVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVE 348
+++ + T L C + + F+ M V + MV +AG +E
Sbjct: 215 DLISWN--TMLDGYARCRE---MSKAFELFEKMPERNTVS-----WSTMVMGYSKAGDME 264
Query: 349 EAYILIKNMPMEC-NAIVWRSLLAACRTHGNVKLAEKV 385
A ++ MP+ N + W ++A G +K A+++
Sbjct: 265 MARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 245/436 (56%), Gaps = 9/436 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K++H+ ++G + V ++ A G ++ VFDR++ W +I G+
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 65 -GNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
N N +A+ LF + + QG HV P+ FTFS K G L +GKQ+ K G+
Sbjct: 347 MKNCNLATEAINLFSEMITQG--HVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+++ V NS+I M+ +E A + FE + K+LV++N+ +D + +A +
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
+ + + TF LS +G++ G +HS + + L V N+L+ MY+KCG
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG-LSCNQPVCNALISMYSKCG 523
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+++ A +F M+ +NVISW +MI G A HG L F +M++E V +P+ +T++ +L
Sbjct: 524 SIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV-KPNEVTYVAIL 582
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
ACSH G V EG R+F+ M D+ ++P ++HY CMVDLL RAGL+ +A+ I MP + +
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
+VWR+ L ACR H N +L + + +LEL+P + Y+ L+N+YA G+W E ++ RR
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702
Query: 423 MQERGVKKPEPGNSFV 438
M+ER + K E G S++
Sbjct: 703 MKERNLVK-EGGCSWI 717
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 215/473 (45%), Gaps = 63/473 (13%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFD---RVDKPDAFLWNTMI 61
K +HAR+ + + ++ +I ++ +GD A VF+ R K D W+ M+
Sbjct: 82 KLVHARLIEFDIEPDSVLYNSLI---SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 62 RGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
+GN + A+ +F + ++ G +VP+ + ++ +++ V +G+ +K
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELG---LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKT 195
Query: 121 G-VENHAHVRNSLIHMYGVMKD-IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
G E+ V SLI M+ ++ E A+++F++M ++V W +I + G EA+
Sbjct: 196 GHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIR 255
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
FF MV SG D T SAC + L+ G+ +HS R+ G + V SLVDMY
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS---GLVDDVECSLVDMY 312
Query: 239 AKC---GAVEEAYEIFRSMKGKNVISWNTMILGLASHGN-GTEALTLFAEMLQENVVRPD 294
AKC G+V++ ++F M+ +V+SW +I G + N TEA+ LF+EM+ + V P+
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPN 372
Query: 295 GITFLGVLCACSH-----------------------------------GGFVDEGRRYFD 319
TF AC + +++ +R F+
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 320 IMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP---MECNAIVWRSLLAACRTH 376
+S + + Y +D R E+A+ L+ + + +A + SLL+
Sbjct: 433 SLS-----EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANV 487
Query: 377 GNVKLAEKVRKHLLELE-PCHSSDYVLLANMYASTGQWNEMSKERRSMQERGV 428
G+++ E++ +++L C+ L +MY+ G + S+ M+ R V
Sbjct: 488 GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 5/222 (2%)
Query: 90 DTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLF 149
D+ TFS LLK LGK +H ++ +E + + NSLI +Y D A +F
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 150 EEML---NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG 206
E M +D+V+W++++ C G+ +A+ F ++ G+ P+D + + AC
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC-GAVEEAYEIFRSMKGKNVISWNTM 265
+ GR + + + V SL+DM+ K + E AY++F M NV++W M
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 266 ILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSH 307
I G EA+ F +M+ D T V AC+
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAE 281
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 235/408 (57%), Gaps = 4/408 (0%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G + A +FD + + D++ W M+ G+ +QPE+A++ Y MQ+ P+ P+ FT S
Sbjct: 165 GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR-VPNSRPNIFTVSI 223
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
+ + + GK++H ++ G+++ + +SL+ MYG I+ A +F++++ KD
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
+V+W S+ID ++ E F+ +V S RP++ TF L+AC + G+ VH
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
+ R + + S+SLVDMY KCG +E A + +++SW ++I G A +G
Sbjct: 344 YMTRVGF-DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPD 402
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
EAL F ++L ++ +PD +TF+ VL AC+H G V++G +F ++ + + T HY C
Sbjct: 403 EALKYF-DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTC 461
Query: 337 MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCH 396
+VDLL R+G E+ +I MPM+ + +W S+L C T+GN+ LAE+ + L ++EP +
Sbjct: 462 LVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPEN 521
Query: 397 SSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIR 444
YV +AN+YA+ G+W E K R+ MQE GV K PG+S+ + R
Sbjct: 522 PVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTK-RPGSSWTEIKRKR 568
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 134/310 (43%), Gaps = 27/310 (8%)
Query: 124 NHAHVRN-SLIHMYGVMKDIETAHQLFEEMLNKDLVAWNS-----IIDCLVCCGKYNEAL 177
NH++ R + +H + + +++ + H + +K N +++ L ++ EA+
Sbjct: 2 NHSNARKLTTLHGFILKRNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAI 61
Query: 178 DFF---------TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEIT 228
D +++ +P +T+ + C AL G+ VH I+ + ++ I
Sbjct: 62 DVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV 121
Query: 229 SVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQE 288
+ N L+ MYAKCG++ +A ++F M +++ SWN M+ G A G EA LF EM ++
Sbjct: 122 -IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 289 NVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLV- 347
D ++ ++ +E + +M R N +P + V +
Sbjct: 181 -----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 348 --EEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLAN 405
+E + I ++ + ++W SL+ G + A + ++E + + + +
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV---SWTSMID 292
Query: 406 MYASTGQWNE 415
Y + +W E
Sbjct: 293 RYFKSSRWRE 302
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 236/412 (57%), Gaps = 22/412 (5%)
Query: 49 VDKPDAFLW---------NTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLK 99
++K D+FL N ++ + + +P KA+L ++ + P V D+F+ F +K
Sbjct: 14 INKFDSFLLHFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFV-DSFSVLFAIK 72
Query: 100 IVGGLGSVVL-GKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK-DL 157
+ + L G+Q+H KLG ++ SL+ Y + D++ A Q+F+E K ++
Sbjct: 73 VSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNI 132
Query: 158 VAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS- 216
V W ++I EA++ F RM + D V LSAC +GA+ G ++S
Sbjct: 133 VLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSR 192
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
I+R L ++ NSL++MY K G E+A ++F K+V ++ +MI G A +G
Sbjct: 193 SIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQ 252
Query: 277 EALTLFAEML-----QENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTV 331
E+L LF +M Q+ V+ P+ +TF+GVL ACSH G V+EG+R+F M DYN++P
Sbjct: 253 ESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPRE 312
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
H+GCMVDL R+G +++A+ I MP++ N ++WR+LL AC HGNV+L E+V++ + E
Sbjct: 313 AHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE 372
Query: 392 LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGI 443
L+ H DYV L+N+YAS G W+E SK M++R K+ PG S++ L I
Sbjct: 373 LDRDHVGDYVALSNIYASKGMWDEKSK----MRDRVRKRRMPGKSWIELGSI 420
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 136/280 (48%), Gaps = 15/280 (5%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRV-DKPDAFLWNTMIRG 63
++IHA + + GF+ + ++ F + GD++YA VFD +K + LW MI
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYS---SVGDVDYARQVFDETPEKQNIVLWTAMISA 141
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG-- 121
+ +A+ +KRM+ + + D + L LG+V +G++++ ++K
Sbjct: 142 YTENENSVEAIELFKRMEAEKIEL--DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRR 199
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+ +RNSL++MY + E A +LF+E + KD+ + S+I G+ E+L+ F
Sbjct: 200 LAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFK 259
Query: 182 RM------VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
+M + + P+D TF+ L AC G + G+ + L + +V
Sbjct: 260 KMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMV 319
Query: 236 DMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGN 274
D++ + G +++A+E M K N + W T++ + HGN
Sbjct: 320 DLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGN 359
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 271 bits (693), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 240/433 (55%), Gaps = 12/433 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
IH+ + G V K+I A G + VFDR+ D WN++I+ +
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYA---EFGRLRDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG-VENH 125
QP +A+ ++ M+ + PD T L I+ LG + + + TL+ G
Sbjct: 326 NEQPLRAISLFQEMRLSR--IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
+ N+++ MY + +++A +F + N D+++WN+II G +EA++ + M +
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 186 SG-MRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAKCGA 243
G + + T+V L AC GAL G +H ++ YL V SL DMY KCG
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF--VVTSLADMYGKCGR 501
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+E+A +F + N + WNT+I HG+G +A+ LF EML E V +PD ITF+ +L
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV-KPDHITFVTLLS 560
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
ACSH G VDEG+ F++M DY + P++KHYGCMVD+ GRAG +E A IK+M ++ +A
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
+W +LL+ACR HGNV L + +HL E+EP H +VLL+NMYAS G+W + + R
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 680
Query: 424 QERGVKKPEPGNS 436
+G++K PG S
Sbjct: 681 HGKGLRKT-PGWS 692
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 193/414 (46%), Gaps = 17/414 (4%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
+IH + GF + V +I + G+ A +FD + D WN MI G+
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN---ARILFDEMPVRDMGSWNAMISGYC 227
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+ ++A+ ++ D+ T LL G G +H ++K G+E+
Sbjct: 228 QSGNAKEALTLSNGLR------AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
V N LI +Y + ++F+ M +DL++WNSII + A+ F M
Sbjct: 282 LFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL 341
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
S ++PD T + S +G + R V R + E ++ N++V MYAK G V+
Sbjct: 342 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVD 401
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
A +F + +VISWNT+I G A +G +EA+ ++ M +E + + T++ VL AC
Sbjct: 402 SARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPAC 461
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
S G + +G + + ++ + V + D+ G+ G +E+A L +P N++
Sbjct: 462 SQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVP 519
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLE--LEPCHSSDYVLLANMYAS----TGQW 413
W +L+A HG+ + A + K +L+ ++P H + LL+ S GQW
Sbjct: 520 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 18/375 (4%)
Query: 5 KEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
K +HAR+ + QN + K++ ++C + G++ A FD + D + WN MI G
Sbjct: 71 KCLHARLVVSKQIQNVCISAKLVNLYCYL----GNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+G + + + + PD TF +LK +V+ G ++HC LK G
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSG-LTPDYRTFPSVLK---ACRTVIDGNKIHCLALKFGFM 182
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+V SLIH+Y K + A LF+EM +D+ +WN++I G EAL
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----T 237
Query: 184 VQSGMRPDDATFVVT-LSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
+ +G+R D+ VV+ LSAC G G +HS + E+ VSN L+D+YA+ G
Sbjct: 238 LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF-VSNKLIDLYAEFG 296
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ + ++F M +++ISWN++I + A++LF EM + + ++PD +T + +
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLA 355
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
S G + R R + +V + + GLV+ A + +P +
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTD 414
Query: 363 AIVWRSLLAACRTHG 377
I W ++++ +G
Sbjct: 415 VISWNTIISGYAQNG 429
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 271 bits (692), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 241/437 (55%), Gaps = 6/437 (1%)
Query: 2 NHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
N+ K +HA +++ + ++ + D A VF +++ D W ++I
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPD---AYLVFKSMEEKDMVAWGSLI 446
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
G + ++A+ + M+ + + PD+ + + GL ++ G Q+H S +K G
Sbjct: 447 SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTG 506
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+ + V +SLI +Y E A ++F M +++VAWNS+I C ++D F
Sbjct: 507 LVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFN 566
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
M+ G+ PD + L A + +L G+ +H R + T + N+L+DMY KC
Sbjct: 567 LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSD-THLKNALIDMYVKC 625
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G + A IF+ M+ K++I+WN MI G SHG+ AL+LF EM + PD +TFL +
Sbjct: 626 GFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTFLSL 684
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
+ AC+H GFV+EG+ F+ M +DY ++P ++HY MVDLLGRAGL+EEAY IK MP+E
Sbjct: 685 ISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEA 744
Query: 362 NAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERR 421
++ +W LL+A RTH NV+L + LL +EP S YV L N+Y G NE +K
Sbjct: 745 DSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLG 804
Query: 422 SMQERGVKKPEPGNSFV 438
M+E+G+ K +PG S++
Sbjct: 805 LMKEKGLHK-QPGCSWI 820
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 165/348 (47%), Gaps = 41/348 (11%)
Query: 50 DKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVV- 108
DK + LWN MI GFG + E ++ Y + +V +FT G LG+
Sbjct: 233 DKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFT--------GALGACSQ 284
Query: 109 -----LGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSI 163
G+Q+HC +K+G+ N +V SL+ MY + A +F +++K L WN++
Sbjct: 285 SENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAM 344
Query: 164 IDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY 223
+ ALD F M Q + PD T +S C +G +G+ VH+ + +
Sbjct: 345 VAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP- 403
Query: 224 LGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
+ +++ ++L+ +Y+KCG +AY +F+SM+ K++++W ++I GL +G EAL +F
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 284 EML-QENVVRPDGITFLGVLCACS-----------HGGFVDEGRRYFDIMSRDYNVQPTV 331
+M ++ ++PD V AC+ HG + G + V
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTG------------LVLNV 511
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNV 379
++DL + GL E A + +M E N + W S++ +C + N+
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNL 557
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 178/376 (47%), Gaps = 11/376 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH + + G H + V ++ ++ G + A +VF V +WN M+ +
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLL---SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAY 348
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ A+ + M+Q V+PD+FT S ++ LG GK +H K +++
Sbjct: 349 AENDYGYSALDLFGFMRQ--KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS 406
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ + ++L+ +Y A+ +F+ M KD+VAW S+I L GK+ EAL F M
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Query: 185 --QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
++PD +AC + AL FG VH + + + + V +SL+D+Y+KCG
Sbjct: 467 DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVF-VGSSLIDLYSKCG 525
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
E A ++F SM +N+++WN+MI + + ++ LF ML + + PD ++ VL
Sbjct: 526 LPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF-PDSVSITSVL 584
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
A S + +G+ R + ++D+ + G + A + K M + +
Sbjct: 585 VAISSTASLLKGKSLHGYTLR-LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK-S 642
Query: 363 AIVWRSLLAACRTHGN 378
I W ++ +HG+
Sbjct: 643 LITWNLMIYGYGSHGD 658
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 186/396 (46%), Gaps = 21/396 (5%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDR-------VDKPD 53
+++ K IH + G+ + + ++ + V G ++YAV VFD V D
Sbjct: 76 LSYGKTIHGSVVVLGWRYDPFIATSLV---NMYVKCGFLDYAVQVFDGWSQSQSGVSARD 132
Query: 54 AFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVL--GK 111
+WN+MI G+ + ++ V ++RM V PD F+ S ++ ++ G+ GK
Sbjct: 133 VTVWNSMIDGYFKFRRFKEGVGCFRRMLV--FGVRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK-DLVAWNSIIDCLVCC 170
Q+H L+ ++ + ++ +LI MY A ++F E+ +K ++V WN +I
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 171 GKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV 230
G +LD + + ++ +F L AC FGR +H C L V
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH-CDVVKMGLHNDPYV 309
Query: 231 SNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
SL+ MY+KCG V EA +F + K + WN M+ A + G AL LF M Q++V
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 291 VRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEE 349
+ PD T V+ CS G + G+ + ++ R +Q T ++ L + G +
Sbjct: 370 L-PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP--IQSTSTIESALLTLYSKCGCDPD 426
Query: 350 AYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV 385
AY++ K+M E + + W SL++ +G K A KV
Sbjct: 427 AYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKV 461
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 21/328 (6%)
Query: 58 NTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCST 117
N+ IR + +A+ Y + P FTF LLK L ++ GK +H S
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTS-VFTFPSLLKACSALTNLSYGKTIHGSV 86
Query: 118 LKLGVENHAHVRNSLIHMYGVMKDIETAHQLFE-------EMLNKDLVAWNSIIDCLVCC 170
+ LG + SL++MY ++ A Q+F+ + +D+ WNS+ID
Sbjct: 87 VVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKF 146
Query: 171 GKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL--AFGRWVHSCIQRATYLGEIT 228
++ E + F RM+ G+RPD + + +S G G+ +H + R + L +
Sbjct: 147 RRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS-LDTDS 205
Query: 229 SVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEMLQ 287
+ +L+DMY K G +A+ +F ++ K NV+ WN MI+G G +L L+ + +
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM-LAK 264
Query: 288 ENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGC--MVDLLGRA 344
N V+ +F G L ACS GR+ + D++ + P Y C ++ + +
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP----YVCTSLLSMYSKC 320
Query: 345 GLVEEAYILIKNMPMECNAIVWRSLLAA 372
G+V EA + + ++ +W +++AA
Sbjct: 321 GMVGEAETVFSCV-VDKRLEIWNAMVAA 347
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 241/434 (55%), Gaps = 8/434 (1%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K I+ + + GF V +I V GDM A VF+ ++ D WN++I G+
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILI---DVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ +A+ +K M E D T+ L+ + L + GK LH + +K G+
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQA--DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI 441
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V N+LI MY ++ + ++F M D V WN++I V G + L T+M
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+S + PD ATF+VTL C ++ A G+ +H C+ R Y E+ + N+L++MY+KCG +
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL-QIGNALIEMYSKCGCL 560
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
E + +F M ++V++W MI +G G +AL FA+M + +V PD + F+ ++ A
Sbjct: 561 ENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV-PDSVVFIAIIYA 619
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CSH G VDEG F+ M Y + P ++HY C+VDLL R+ + +A I+ MP++ +A
Sbjct: 620 CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS 679
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
+W S+L ACRT G+++ AE+V + ++EL P +L +N YA+ +W+++S R+S++
Sbjct: 680 IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 739
Query: 425 ERGVKKPEPGNSFV 438
++ + K PG S++
Sbjct: 740 DKHITK-NPGYSWI 752
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 200/397 (50%), Gaps = 17/397 (4%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKP-DAFLWN 58
+N L+ IHA + G + GK+I + PA ++SVF RV + +LWN
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPAS----SLSVFRRVSPAKNVYLWN 75
Query: 59 TMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
++IR F +A+ FY +++ E V PD +TF ++K GL +G ++ L
Sbjct: 76 SIIRAFSKNGLFPEALEFYGKLR--ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
+G E+ V N+L+ MY M + A Q+F+EM +DLV+WNS+I G Y EAL+
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
+ + S + PD T L A G + + G+ +H ++ + + V+N LV MY
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG-VNSVVVVNNGLVAMY 252
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
K +A +F M ++ +S+NTMI G E++ +F E L + +PD +T
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTV 310
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSR-DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
VL AC H + + ++ M + + ++ TV++ ++D+ + G + A + +
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNS- 367
Query: 358 PMEC-NAIVWRSLLAACRTHGNVKLAEKVRKHLLELE 393
MEC + + W S+++ G++ A K+ K ++ +E
Sbjct: 368 -MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 181/370 (48%), Gaps = 14/370 (3%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKI 100
A VFD +D D+ +NTMI G+ E++V +F + + Q +P D T S +L+
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKP----DLLTVSSVLRA 316
Query: 101 VGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAW 160
G L + L K ++ LK G + VRN LI +Y D+ TA +F M KD V+W
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 161 NSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQR 220
NSII + G EA+ F M+ + D T+++ +S + L FG+ +HS +
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALT 280
+ ++ SVSN+L+DMYAKCG V ++ +IF SM + ++WNT+I G+ L
Sbjct: 437 SGICIDL-SVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDL 340
+ +M + VV PD TFL L C+ G+ + R + + ++ ++++
Sbjct: 496 VTTQMRKSEVV-PDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEM 553
Query: 341 LGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCH--SS 398
+ G +E + + + M + + W ++ A +G EK + ++E
Sbjct: 554 YSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPD 609
Query: 399 DYVLLANMYA 408
V +A +YA
Sbjct: 610 SVVFIAIIYA 619
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 254/470 (54%), Gaps = 40/470 (8%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++++A I +G N L+V ++ + + ++ A +FD + L N M +
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALV---DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNY 312
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+A+ + M + V PD + + L +++ GK H L+ G E+
Sbjct: 313 VRQGLTREALGVFNLMM--DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----------------------------- 155
++ N+LI MY +TA ++F+ M NK
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP 430
Query: 156 --DLVAWNSIIDCLVCCGKYNEALDFFTRM-VQSGMRPDDATFVVTLSACGAMGALAFGR 212
++V+WN+II LV + EA++ F M Q G+ D T + SACG +GAL +
Sbjct: 431 EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAK 490
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
W++ I++ ++ + +LVDM+++CG E A IF S+ ++V +W I +A
Sbjct: 491 WIYYYIEKNGIQLDV-RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
GN A+ LF +M+++ + +PDG+ F+G L ACSHGG V +G+ F M + + V P
Sbjct: 550 GNAERAIELFDDMIEQGL-KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
HYGCMVDLLGRAGL+EEA LI++MPME N ++W SLLAACR GNV++A + + L
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 393 EPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
P + YVLL+N+YAS G+WN+M+K R SM+E+G++KP PG S + + G
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP-PGTSSIQIRG 717
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 186/413 (45%), Gaps = 57/413 (13%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK-PDAFLWNT 59
++ LK H + + G + + K++ +++A VF+ + F++N+
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+IRG+ ++ +A+L + RM + PD +TF F L + G Q+H +K
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNS--GISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGK-----YN 174
+G V+NSL+H Y ++++A ++F+EM +++V+W S+I CG
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI-----CGYARRDFAK 217
Query: 175 EALDFFTRMVQS-GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNS 233
+A+D F RMV+ + P+ T V +SAC + L G V++ I+ + VS +
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-A 276
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRP 293
LVDMY KC A++ A +F N+ N M G EAL +F ++ ++ VRP
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRP 335
Query: 294 DGITFLGVLCACS-----------HG-----GF-------------------VDEGRRYF 318
D I+ L + +CS HG GF D R F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
D MS TV + +V G V+ A+ + MP E N + W ++++
Sbjct: 396 DRMS-----NKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTIIS 442
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/438 (34%), Positives = 243/438 (55%), Gaps = 9/438 (2%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
LKE+H + F N LV F A G ++YA VF + WN +I G
Sbjct: 414 LKELHCYSLKQEFVYNELVAN---AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+N P ++ +Q ++PD+FT LL L S+ LGK++H ++ +E
Sbjct: 471 HAQSNDPRLSL--DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 528
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
V S++ +Y ++ T LF+ M +K LV+WN++I + G + AL F +M
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
V G++ + + AC + +L GR H+ + L + ++ SL+DMYAK G+
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGS 647
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+ ++ ++F +K K+ SWN MI+G HG EA+ LF EM Q PD +TFLGVL
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM-QRTGHNPDDLTFLGVLT 706
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAY-ILIKNMPMECN 362
AC+H G + EG RY D M + ++P +KHY C++D+LGRAG +++A ++ + M E +
Sbjct: 707 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 766
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
+W+SLL++CR H N+++ EKV L ELEP +YVLL+N+YA G+W ++ K R+
Sbjct: 767 VGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQR 826
Query: 423 MQERGVKKPEPGNSFVGL 440
M E ++K + G S++ L
Sbjct: 827 MNEMSLRK-DAGCSWIEL 843
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 146/313 (46%), Gaps = 11/313 (3%)
Query: 5 KEIHARIY-QTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
++IH + T + ++ +II A+ D + VFD + + F WN +I
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF---VFDALRSKNLFQWNAVISS 160
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ ++ + + M ++PD FT+ ++K G+ V +G +H +K G+
Sbjct: 161 YSRNELYDEVLETFIEMIS-TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV 219
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
V N+L+ YG + A QLF+ M ++LV+WNS+I G E+ M
Sbjct: 220 EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEM 279
Query: 184 VQS----GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
++ PD AT V L C + G+ VH + E+ ++N+L+DMY+
Sbjct: 280 MEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV-LNNALMDMYS 338
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV-VRPDGITF 298
KCG + A IF+ KNV+SWNTM+ G ++ G+ + +ML V+ D +T
Sbjct: 339 KCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI 398
Query: 299 LGVLCACSHGGFV 311
L + C H F+
Sbjct: 399 LNAVPVCFHESFL 411
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 2/179 (1%)
Query: 199 LSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKN 258
L A G + GR +H + +T L + ++ MYA CG+ +++ +F +++ KN
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 259 VISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYF 318
+ WN +I + + E L F EM+ + PD T+ V+ AC+ V G
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
++ + V+ +V G G V +A L MP E N + W S++ +G
Sbjct: 211 GLVVKTGLVEDVFVG-NALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMIRVFSDNG 267
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 254/470 (54%), Gaps = 40/470 (8%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++++A I +G N L+V ++ + + ++ A +FD + L N M +
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALV---DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNY 312
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+A+ + M + V PD + + L +++ GK H L+ G E+
Sbjct: 313 VRQGLTREALGVFNLMM--DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----------------------------- 155
++ N+LI MY +TA ++F+ M NK
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP 430
Query: 156 --DLVAWNSIIDCLVCCGKYNEALDFFTRM-VQSGMRPDDATFVVTLSACGAMGALAFGR 212
++V+WN+II LV + EA++ F M Q G+ D T + SACG +GAL +
Sbjct: 431 EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAK 490
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
W++ I++ ++ + +LVDM+++CG E A IF S+ ++V +W I +A
Sbjct: 491 WIYYYIEKNGIQLDV-RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
GN A+ LF +M+++ + +PDG+ F+G L ACSHGG V +G+ F M + + V P
Sbjct: 550 GNAERAIELFDDMIEQGL-KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
HYGCMVDLLGRAGL+EEA LI++MPME N ++W SLLAACR GNV++A + + L
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 393 EPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
P + YVLL+N+YAS G+WN+M+K R SM+E+G++KP PG S + + G
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP-PGTSSIQIRG 717
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 186/413 (45%), Gaps = 57/413 (13%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK-PDAFLWNT 59
++ LK H + + G + + K++ +++A VF+ + F++N+
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+IRG+ ++ +A+L + RM + PD +TF F L + G Q+H +K
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNS--GISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGK-----YN 174
+G V+NSL+H Y ++++A ++F+EM +++V+W S+I CG
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI-----CGYARRDFAK 217
Query: 175 EALDFFTRMVQS-GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNS 233
+A+D F RMV+ + P+ T V +SAC + L G V++ I+ + VS +
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-A 276
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRP 293
LVDMY KC A++ A +F N+ N M G EAL +F ++ ++ VRP
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRP 335
Query: 294 DGITFLGVLCACS-----------HG-----GF-------------------VDEGRRYF 318
D I+ L + +CS HG GF D R F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
D MS TV + +V G V+ A+ + MP E N + W ++++
Sbjct: 396 DRMS-----NKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTIIS 442
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 238/435 (54%), Gaps = 8/435 (1%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+ +HA + +T + + ++++F D A V D + + + W MI +
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLED---ARKVLDEMPEKNVVSWTAMISRY 128
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
T +A+ + M + + P+ FTF+ +L + LGKQ+H +K ++
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGK--PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
H V +SL+ MY I+ A ++FE + +D+V+ +II G EAL+ F R+
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
GM P+ T+ L+A + L G+ H + R L + NSL+DMY+KCG +
Sbjct: 247 SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE-LPFYAVLQNSLIDMYSKCGNL 305
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
A +F +M + ISWN M++G + HG G E L LF M E V+PD +T L VL
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 305 CSHGGFVDEGRRYFD-IMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
CSHG D G FD +++ +Y +P +HYGC+VD+LGRAG ++EA+ IK MP + A
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
V SLL ACR H +V + E V + L+E+EP ++ +YV+L+N+YAS G+W +++ R M
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM 485
Query: 424 QERGVKKPEPGNSFV 438
++ V K EPG S++
Sbjct: 486 MQKAVTK-EPGRSWI 499
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 140/269 (52%), Gaps = 6/269 (2%)
Query: 110 GKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVC 169
G+++H +K ++R L+ YG +E A ++ +EM K++V+W ++I
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 170 CGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS 229
G +EAL F M++S +P++ TF L++C L G+ +H I + Y I
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF- 189
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
V +SL+DMYAK G ++EA EIF + ++V+S +I G A G EAL +F + E
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 290 VVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVE 348
+ P+ +T+ +L A S +D G++ + ++ R+ +++ ++D+ + G +
Sbjct: 250 -MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLS 306
Query: 349 EAYILIKNMPMECNAIVWRSLLAACRTHG 377
A L NMP E AI W ++L HG
Sbjct: 307 YARRLFDNMP-ERTAISWNAMLVGYSKHG 334
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 214/349 (61%), Gaps = 3/349 (0%)
Query: 90 DTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLF 149
D + S ++ G G HC LK G + ++ +SL+ +Y ++E A+++F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 150 EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA 209
EEM +++V+W ++I + + L +++M +S P+D TF LSAC GAL
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 210 FGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGL 269
GR VH C L +SNSL+ MY KCG +++A+ IF K+V+SWN+MI G
Sbjct: 239 QGRSVH-CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
A HG +A+ LF M+ ++ +PD IT+LGVL +C H G V EGR++F++M+ ++ ++P
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKP 356
Query: 330 TVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHL 389
+ HY C+VDLLGR GL++EA LI+NMPM+ N+++W SLL +CR HG+V + +
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEER 416
Query: 390 LELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
L LEP ++ +V LAN+YAS G W E + R+ M+++G+ K PG S++
Sbjct: 417 LMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGL-KTNPGCSWI 464
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 142/274 (51%), Gaps = 16/274 (5%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
+G++ A VF+ + + + W MI GF + + + Y +M++ P+ +TF+
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD--PNDYTFT 225
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
LL G G++ G+ +HC TL +G++++ H+ NSLI MY D++ A ++F++ NK
Sbjct: 226 ALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK 285
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMV-QSGMRPDDATFVVTLSACGAMGALAFGRWV 214
D+V+WNS+I G +A++ F M+ +SG +PD T++ LS+C G + GR
Sbjct: 286 DVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKF 345
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHG 273
+ + E+ S LVD+ + G ++EA E+ +M K N + W +++ HG
Sbjct: 346 FNLMAEHGLKPELNHYS-CLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Query: 274 NGTEALTLFAEMLQENVVRPDGITFLGVLCACSH 307
+ + E L ++ PD CA +H
Sbjct: 405 DVWTGIRAAEERL---MLEPD--------CAATH 427
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 236/398 (59%), Gaps = 13/398 (3%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A VF + + + LW +MI G+ A ++ E +V S +++
Sbjct: 47 ANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD--LSPERDIVLWNTMISGYIEMG 104
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWN 161
L + L Q+ C + N+++ Y + D+E ++F++M +++ +WN
Sbjct: 105 NMLEARSLFDQMPCRDV--------MSWNTVLEGYANIGDMEACERVFDDMPERNVFSWN 156
Query: 162 SIIDCLVCCGKYNEALDFFTRMVQSG-MRPDDATFVVTLSACGAMGALAFGRWVHSCIQR 220
+I G+ +E L F RMV G + P+DAT + LSAC +GA FG+WVH +
Sbjct: 157 GLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGET 216
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALT 280
Y +V N+L+DMY KCGA+E A E+F+ +K +++ISWNTMI GLA+HG+GTEAL
Sbjct: 217 LGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALN 276
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDL 340
LF EM + + + PD +TF+GVLCAC H G V++G YF+ M D+++ P ++H GC+VDL
Sbjct: 277 LFHEM-KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDL 335
Query: 341 LGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDY 400
L RAG + +A I MP++ +A++W +LL A + + V + E + L++LEP + +++
Sbjct: 336 LSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANF 395
Query: 401 VLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
V+L+N+Y G++++ ++ + +M++ G KK E G S++
Sbjct: 396 VMLSNIYGDAGRFDDAARLKVAMRDTGFKK-EAGVSWI 432
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 120/233 (51%), Gaps = 5/233 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
GDM VFD + + + F WN +I+G+ + + + +KRM E VVP+ T +
Sbjct: 135 GDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD-EGSVVPNDATMTL 193
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVEN-HAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
+L LG+ GK +H LG +V+N+LI MYG IE A ++F+ + +
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFG-RWV 214
DL++WN++I+ L G EAL+ F M SG+ PD TFV L AC MG + G +
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYF 313
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMI 266
+S + + EI +VD+ ++ G + +A E M K + + W T++
Sbjct: 314 NSMFTDFSIMPEIEHCG-CVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 116/253 (45%), Gaps = 24/253 (9%)
Query: 132 LIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPD 191
L M +M I +A+++F EM+ K++V W S+I+ + N+ L R D
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYL----LNKDLVSARRYFDLSPERD 89
Query: 192 DATFVVTLSACGAMGALAFGRWVHS---CIQRATYLGEITSVSNSLVDMYAKCGAVEEAY 248
+ +S MG + R + C ++ N++++ YA G +E
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSW--------NTVLEGYANIGDMEACE 141
Query: 249 EIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
+F M +NV SWN +I G A +G +E L F M+ E V P+ T VL AC+
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 309 GFVDEGR---RYFDIMSRDYN-VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
G D G+ +Y + + YN V VK+ ++D+ G+ G +E A + K + + I
Sbjct: 202 GAFDFGKWVHKYGETLG--YNKVDVNVKN--ALIDMYGKCGAIEIAMEVFKGIKRR-DLI 256
Query: 365 VWRSLLAACRTHG 377
W +++ HG
Sbjct: 257 SWNTMINGLAAHG 269
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 240/427 (56%), Gaps = 8/427 (1%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K H + ++G + +V ++ + V GD++ A VF+ D +W MI G+
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLL---DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGY 318
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ +A+ +++M+ E + P+ T + +L G + ++ LG+ +H ++K+G+ +
Sbjct: 319 THNGSVNEALSLFQKMKGVE--IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD 376
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+V N+L+HMY A +FE KD+VAWNSII G +EAL F RM
Sbjct: 377 -TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEIT-SVSNSLVDMYAKCGA 243
+ P+ T SAC ++G+LA G +H+ + +L + V +L+D YAKCG
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+ A IF +++ KN I+W+ MI G G+ +L LF EML++ +P+ TF +L
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-KPNESTFTSILS 554
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
AC H G V+EG++YF M +DYN P+ KHY CMVD+L RAG +E+A +I+ MP++ +
Sbjct: 555 ACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
+ + L C H L E V K +L+L P +S YVL++N+YAS G+WN+ + R M
Sbjct: 615 RCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLM 674
Query: 424 QERGVKK 430
++RG+ K
Sbjct: 675 KQRGLSK 681
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 203/425 (47%), Gaps = 12/425 (2%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+++ K+IH ++ + N ++ G + ++ G++ A VF+ + + W +M
Sbjct: 158 LDNGKKIHCQLVKVPSFDNVVLTGLLDMY----AKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
I G+ + E+ ++ + RM+ E +V+ + +T+ L+ L ++ GK H +K
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMR--ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS 271
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
G+E + + SL+ MY DI A ++F E + DLV W ++I G NEAL F
Sbjct: 272 GIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+M ++P+ T LS CG + L GR VH + T+V+N+LV MYAK
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD--TNVANALVHMYAK 389
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
C +A +F K++++WN++I G + +G+ EAL LF M E+V P+G+T
Sbjct: 390 CYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVT-PNGVTVAS 448
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG-CMVDLLGRAGLVEEAYILIKNMPM 359
+ AC+ G + G + + + H G ++D + G + A ++ +
Sbjct: 449 LFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE- 507
Query: 360 ECNAIVWRSLLAACRTHGN-VKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
E N I W +++ G+ + E + L + + + S + + + TG NE K
Sbjct: 508 EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKK 567
Query: 419 ERRSM 423
SM
Sbjct: 568 YFSSM 572
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 185/405 (45%), Gaps = 44/405 (10%)
Query: 45 VFDRVDKPDAFLWNTMIRGFG-NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGG 103
VFD++ +PD +LW M+R + N E L+ M+ G + D FS LK
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY---DDIVFSKALKACTE 154
Query: 104 LGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSI 163
L + GK++HC +K+ ++ V L+ MY +I++AH++F ++ +++V W S+
Sbjct: 155 LQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 164 IDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY 223
I V E L F RM ++ + ++ T+ + AC + AL G+W H C+ ++
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 224 LGEITS-VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLF 282
E++S + SL+DMY KCG + A +F +++ W MI+G +G+ EAL+LF
Sbjct: 274 --ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR----DYNVQPTVKH----- 333
+M + ++P+ +T VL C ++ GR + + D NV + H
Sbjct: 332 QKM-KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKC 390
Query: 334 --------------------YGCMVDLLGRAGLVEEAYILIKNMPMEC---NAIVWRSLL 370
+ ++ + G + EA L M E N + SL
Sbjct: 391 YQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLF 450
Query: 371 AACRTHGNVKLAEKVRKHLLELEPCHSSDY---VLLANMYASTGQ 412
+AC + G++ + + + ++L SS L + YA G
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 130/280 (46%), Gaps = 15/280 (5%)
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
G+ + L+ +YG + A +F+++ D W ++ C + E + +
Sbjct: 71 GLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY 130
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+++ G R DD F L AC + L G+ +H + + + V L+DMYAK
Sbjct: 131 DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV--VLTGLLDMYAK 188
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG ++ A+++F + +NV+ W +MI G + E L LF M +EN V + T+
Sbjct: 189 CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM-RENNVLGNEYTYGT 247
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV----DLLGRAGLVEEAYILIKN 356
++ AC+ + +G+ + + V+ ++ C+V D+ + G + A + N
Sbjct: 248 LIMACTKLSALHQGKWFHGCL-----VKSGIELSSCLVTSLLDMYVKCGDISNARRVF-N 301
Query: 357 MPMECNAIVWRSLLAACRTHGNVKLAEKVRKHL--LELEP 394
+ ++W +++ +G+V A + + + +E++P
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 235/406 (57%), Gaps = 9/406 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVL--FYKRMQQGEPHVVPDTFTF 94
G + A VFD + + WNTMI G N+ E L F + +G FT
Sbjct: 110 GFVELARQVFDGMLERSLVSWNTMI-GLYTRNRMESEALDIFLEMRNEGFKF---SEFTI 165
Query: 95 SFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN 154
S +L G + K+LHC ++K ++ + +V +L+ +Y I+ A Q+FE M +
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD 225
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
K V W+S++ V Y EAL + R + + + T + AC + AL G+ +
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN 274
H+ I ++ + G V++S VDMYAKCG++ E+Y IF ++ KN+ WNT+I G A H
Sbjct: 286 HAVICKSGF-GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 344
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
E + LF E +Q++ + P+ +TF +L C H G V+EGRR+F +M Y + P V HY
Sbjct: 345 PKEVMILF-EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 403
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEP 394
CMVD+LGRAGL+ EAY LIK++P + A +W SLLA+CR + N++LAE + L ELEP
Sbjct: 404 SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEP 463
Query: 395 CHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGL 440
++ ++VLL+N+YA+ QW E++K R+ +++ VKK G S++ +
Sbjct: 464 ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVR-GKSWIDI 508
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 4/284 (1%)
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
+L++ G+V+ K H +++ +E + N LI+ Y +E A Q+F+ ML +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
LV+WN++I +EALD F M G + + T LSACG + +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH- 185
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
C+ T + V +L+D+YAKCG +++A ++F SM+ K+ ++W++M+ G + N
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
EAL L+ Q + + T V+CACS+ + EG++ ++ + V
Sbjct: 246 EALLLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSNVFVASS 303
Query: 337 MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVK 380
VD+ + G + E+YI+ + E N +W ++++ H K
Sbjct: 304 AVDMYAKCGSLRESYIIFSEV-QEKNLELWNTIISGFAKHARPK 346
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 265 bits (677), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 242/436 (55%), Gaps = 11/436 (2%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
H K + + Y+ GF +G +V C + + G A +FD + + D WN++I
Sbjct: 54 HCKVVKSVSYRHGF------IGDQLVGCYLRL--GHDVCAEKLFDEMPERDLVSWNSLIS 105
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G+ K RM E P+ TF ++ GS G+ +H +K GV
Sbjct: 106 GYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV 165
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
V N+ I+ YG D+ ++ +LFE++ K+LV+WN++I + G + L +F
Sbjct: 166 LEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNM 225
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
+ G PD ATF+ L +C MG + + +H I + G ++ +L+D+Y+K G
Sbjct: 226 SRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN-KCITTALLDLYSKLG 284
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+E++ +F + + ++W M+ A+HG G +A+ F E++ + PD +TF +L
Sbjct: 285 RLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF-ELMVHYGISPDHVTFTHLL 343
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
ACSH G V+EG+ YF+ MS+ Y + P + HY CMVDLLGR+GL+++AY LIK MPME +
Sbjct: 344 NACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPS 403
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
+ VW +LL ACR + + +L K + L ELEP +YV+L+N+Y+++G W + S+ R
Sbjct: 404 SGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNL 463
Query: 423 MQERGVKKPEPGNSFV 438
M+++G+ + G S++
Sbjct: 464 MKQKGLVRA-SGCSYI 478
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 8/306 (2%)
Query: 75 LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIH 134
L+ +R V S L+ V S+ L + LHC +K H + + L+
Sbjct: 15 LYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVG 74
Query: 135 MYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS--GMRPDD 192
Y + A +LF+EM +DLV+WNS+I G + + +RM+ S G RP++
Sbjct: 75 CYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNE 134
Query: 193 ATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFR 252
TF+ +SAC G+ GR +H + + L E+ V N+ ++ Y K G + + ++F
Sbjct: 135 VTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEV-KVVNAFINWYGKTGDLTSSCKLFE 193
Query: 253 SMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVD 312
+ KN++SWNTMI+ +G + L F M + PD TFL VL +C G V
Sbjct: 194 DLSIKNLVSWNTMIVIHLQNGLAEKGLAYF-NMSRRVGHEPDQATFLAVLRSCEDMGVVR 252
Query: 313 EGRRYFD-IMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
+ IM ++ + ++DL + G +E++ + + +++ W ++LA
Sbjct: 253 LAQGIHGLIMFGGFSGNKCIT--TALLDLYSKLGRLEDSSTVFHEITSP-DSMAWTAMLA 309
Query: 372 ACRTHG 377
A THG
Sbjct: 310 AYATHG 315
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/442 (32%), Positives = 254/442 (57%), Gaps = 12/442 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFL--WNTMIRGF 64
+HA++++ GF + V +I A G A +VF+ + P+ + W ++ +
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGS---ARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+P +A+ + +M++ + V PD +L L + G+ +H S +K+G+E
Sbjct: 198 AQNGEPMEALEIFSQMRKMD--VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI 255
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ SL MY + TA LF++M + +L+ WN++I G EA+D F M+
Sbjct: 256 EPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 315
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+RPD + +SAC +G+L R ++ + R+ Y ++ +S++L+DM+AKCG+V
Sbjct: 316 NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF-ISSALIDMFAKCGSV 374
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
E A +F ++V+ W+ MI+G HG EA++L+ M + V P+ +TFLG+L A
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPNDVTFLGLLMA 433
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
C+H G V EG +F+ M+ D+ + P +HY C++DLLGRAG +++AY +IK MP++
Sbjct: 434 CNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
VW +LL+AC+ H +V+L E + L ++P ++ YV L+N+YA+ W+ +++ R M+
Sbjct: 493 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 552
Query: 425 ERGVKKPEPGNSFVGLPGIRLE 446
E+G+ K + G S+V + G RLE
Sbjct: 553 EKGLNK-DVGCSWVEVRG-RLE 572
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 210/409 (51%), Gaps = 14/409 (3%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
LK+IHAR+ G + ++ K+I S GD+ +A VFD + +P F WN +IR
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLI---HASSSFGDITFARQVFDDLPRPQIFPWNAIIR 92
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G+ N + A+L Y MQ V PD+FTF LLK GL + +G+ +H +LG
Sbjct: 93 GYSRNNHFQDALLMYSNMQLAR--VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF 150
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFE--EMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
+ V+N LI +Y + + +A +FE + + +V+W +I+ G+ EAL+ F
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
++M + ++PD V L+A + L GR +H+ + + E + SL MYAK
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE-PDLLISLNTMYAK 269
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG V A +F MK N+I WN MI G A +G EA+ +F EM+ ++ VRPD I+
Sbjct: 270 CGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITS 328
Query: 301 VLCACSHGGFVDEGRRYFDIMSR-DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
+ AC+ G +++ R ++ + R DY + ++D+ + G VE A L+ + +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGAR-LVFDRTL 385
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYA 408
+ + +VW +++ HG + A + + +E H +D L + A
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYR-AMERGGVHPNDVTFLGLLMA 433
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 224/392 (57%), Gaps = 10/392 (2%)
Query: 37 GDMNYAVSVFDRVDKP-DAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
G ++ A VFD + + DA ++T++ G+ ++ A+ ++ M++ E VV + T
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE--VVVNVSTLL 231
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
L + LG + + H +K+G++ H+ +LI MYG I +A ++F+ + K
Sbjct: 232 SFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRK 291
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
D+V WN +ID G E + +M M+P+ +TFV LS+C A GR V
Sbjct: 292 DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
++ + + +LVDMYAK G +E+A EIF MK K+V SW MI G +HG
Sbjct: 352 DLLEEERIALDAI-LGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLA 410
Query: 276 TEALTLFAEMLQENV-VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
EA+TLF +M +EN VRP+ ITFL VL ACSHGG V EG R F M Y+ P V+HY
Sbjct: 411 REAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHY 470
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEP 394
GC+VDLLGRAG +EEAY LI+N+P+ ++ WR+LLAACR +GN L E V L E+
Sbjct: 471 GCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGE 530
Query: 395 CHSSDYVLLANMYASTGQW-----NEMSKERR 421
H +D +LLA +A G NE++K R+
Sbjct: 531 THPADAILLAGTHAVAGNPEKSLDNELNKGRK 562
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 186/377 (49%), Gaps = 13/377 (3%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
+ IH + +TG ++ V K++ F +V D+ YA S+F+ V + F++NTMIR
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL----DIRYASSIFEHVSNTNLFMFNTMIR 98
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G+ +++PE+A + +++ + D F+F LK V +G+ LH L+ G
Sbjct: 99 GYSISDEPERAFSVFNQLRA--KGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGF 156
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK-DLVAWNSIIDCLVCCGKYNEALDFFT 181
+RN+LIH Y V I A ++F+EM D V ++++++ + K ALD F
Sbjct: 157 MVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFR 216
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAK 240
M +S + + +T + LSA +G L+ H CI+ L + +L+ MY K
Sbjct: 217 IMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLD--LHLITALIGMYGK 274
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
G + A IF K+V++WN MI A G E + L +M E ++P+ TF+G
Sbjct: 275 TGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK-MKPNSSTFVG 333
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
+L +C++ GR D++ + + +VD+ + GL+E+A + M +
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTA-LVDMYAKVGLLEKAVEIFNRMK-D 391
Query: 361 CNAIVWRSLLAACRTHG 377
+ W ++++ HG
Sbjct: 392 KDVKSWTAMISGYGAHG 408
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/406 (39%), Positives = 233/406 (57%), Gaps = 11/406 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G + A VF + + N +I G+ N E VLF + + +G V P TF+
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRG---VNPSEITFAT 634
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHA-HVRNSLIHMYGVMKDIETAHQLFEEMLN- 154
+++ S+ LG Q H K G + ++ SL+ MY + + A LF E+ +
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP 694
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
K +V W ++ G Y EAL F+ M G+ PD ATFV L C + +L GR +
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 215 HSCI-QRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASH 272
HS I A L E+TS N+L+DMYAKCG ++ + ++F M+ + NV+SWN++I G A +
Sbjct: 755 HSLIFHLAHDLDELTS--NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
G +AL +F M Q +++ PD ITFLGVL ACSH G V +GR+ F++M Y ++ V
Sbjct: 813 GYAEDALKIFDSMRQSHIM-PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
H CMVDLLGR G ++EA I+ ++ +A +W SLL ACR HG+ E + L+EL
Sbjct: 872 HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIEL 931
Query: 393 EPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
EP +SS YVLL+N+YAS G W + + R+ M++RGVKK PG S++
Sbjct: 932 EPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKV-PGYSWI 976
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 181/384 (47%), Gaps = 10/384 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+HA + G N + VG +V ++ M A VF+ +++ + WN MIRG+ +
Sbjct: 349 VHAEAIKLGLASN-IYVGSSLV--SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
+ K + + M+ ++ D FTF+ LL + +G Q H +K + +
Sbjct: 406 NGESHKVMELFMDMKSSGYNI--DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 463
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
V N+L+ MY +E A Q+FE M ++D V WN+II V +EA D F RM
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
G+ D A TL AC + L G+ VH C+ L +SL+DMY+KCG +++
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVH-CLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
A ++F S+ +V+S N +I G S N EA+ LF EML V P ITF ++ AC
Sbjct: 583 ARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRG-VNPSEITFATIVEACH 640
Query: 307 HGGFVDEGRRYF-DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
+ G ++ I R ++ + + + G+ EA L + + ++
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT-EACALFSELSSPKSIVL 699
Query: 366 WRSLLAACRTHGNVKLAEKVRKHL 389
W +++ +G + A K K +
Sbjct: 700 WTGMMSGHSQNGFYEEALKFYKEM 723
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 179/366 (48%), Gaps = 9/366 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+ R+ G +HL +I + G + A +F + PD WN MI G G
Sbjct: 248 VFERMRDEGHRPDHLAFVTVI---NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGK 304
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
A+ ++ M++ V T +L +G + ++ LG +H +KLG+ ++
Sbjct: 305 RGCETVAIEYFFNMRKSS--VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
+V +SL+ MY + +E A ++FE + K+ V WN++I G+ ++ ++ F M S
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
G DD TF LS C A L G HS I + L + V N+LVDMYAKCGA+E+
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK-LAKNLFVGNALVDMYAKCGALED 481
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
A +IF M ++ ++WNT+I N +EA LF M +V DG L AC+
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV-SDGACLASTLKACT 540
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVW 366
H + +G++ +S + + ++D+ + G++++A + ++P E + +
Sbjct: 541 HVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSM 598
Query: 367 RSLLAA 372
+L+A
Sbjct: 599 NALIAG 604
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 24/328 (7%)
Query: 109 LGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLV 168
+GK +H +L LG+++ + N+++ +Y + A + F+ L KD+ AWNS++
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYS 136
Query: 169 CCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSC-----IQRATY 223
GK + L F + ++ + P+ TF + LS C + FGR +H ++R +Y
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 224 LGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
G +LVDMYAKC + +A +F + N + W + G G EA+ +F
Sbjct: 197 CG------GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 284 EMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
M E RPD + F+ V+ G + + R F MS P V + M+ G+
Sbjct: 251 RMRDEG-HRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGK 304
Query: 344 AG---LVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDY 400
G + E + ++ ++ S+L+A N+ L V ++L S+ Y
Sbjct: 305 RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL-GLASNIY 363
Query: 401 V--LLANMYASTGQWNEMSKERRSMQER 426
V L +MY+ + +K +++E+
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 39 MNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLL 98
++YA FD ++K D WN+M+ + + +P K + + + E + P+ FTFS +L
Sbjct: 111 VSYAEKQFDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSL--FENQIFPNKFTFSIVL 167
Query: 99 KIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLV 158
+V G+Q+HCS +K+G+E +++ +L+ MY I A ++FE +++ + V
Sbjct: 168 STCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTV 227
Query: 159 AWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCI 218
W + V G EA+ F RM G RPD FV
Sbjct: 228 CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV---------------------- 265
Query: 219 QRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEA 278
++++ Y + G +++A +F M +V++WN MI G G T A
Sbjct: 266 --------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 279 LTLFAEMLQENV 290
+ F M + +V
Sbjct: 312 IEYFFNMRKSSV 323
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 251/436 (57%), Gaps = 13/436 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRV-DKPDAFLWNTMIR 62
K H + + F + V ++ ++C + ++ A +F R+ ++ + WNTM++
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFEL----LSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G+G K + ++++Q + D+ + + ++ +G+V+LGK LHC +K +
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEI--DSASATSVISSCSHIGAVLLGKSLHCYVVKTSL 464
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ V NSLI +YG M D+ A ++F E + +++ WN++I V C + +A+ F R
Sbjct: 465 DLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDR 523
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
MV +P T V L AC G+L G+ +H I + + S+S +L+DMYAKCG
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNL-SLSAALIDMYAKCG 582
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+E++ E+F + K+ + WN MI G HG+ A+ LF +M +E+ V+P G TFL +L
Sbjct: 583 HLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM-EESDVKPTGPTFLALL 641
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
AC+H G V++G++ F M + Y+V+P +KHY C+VDLL R+G +EEA + +MP +
Sbjct: 642 SACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPD 700
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
++W +LL++C THG ++ ++ + + +P + Y++LANMY++ G+W E + R
Sbjct: 701 GVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREM 760
Query: 423 MQERGVKKPEPGNSFV 438
M+E GV K G+S V
Sbjct: 761 MRESGVGK-RAGHSVV 775
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 178/394 (45%), Gaps = 17/394 (4%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ L++ +A I G +N V K+I + G N + VF V + D FLWN++
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLI---SSYASYGKPNLSSRVFHLVTRRDIFLWNSI 96
Query: 61 IRG-FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
I+ F N + F+ + G+ PD FT ++ L +G +H LK
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLLSGQS---PDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 120 L-GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
G + + V S ++ Y ++ A +F+EM ++D+VAW +II V G+ L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 179 FFTRMVQSGM---RPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
+ +M +G +P+ T AC +GAL GR +H + L V +S+
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVK-NGLASSKFVQSSMF 272
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDG 295
Y+K G EAY FR + +++ SW ++I LA G+ E+ +F EM Q + PDG
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM-QNKGMHPDG 331
Query: 296 ITFLGVLCACSHGGFVDEGRRYFDIMSRD-YNVQPTVKHYGCMVDLLGRAGLVEEAYILI 354
+ ++ V +G+ + + R +++ TV + ++ + + L+ A L
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCN--SLLSMYCKFELLSVAEKLF 389
Query: 355 KNMPMECNAIVWRSLLAAC-RTHGNVKLAEKVRK 387
+ E N W ++L + +VK E RK
Sbjct: 390 CRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRK 423
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 159/360 (44%), Gaps = 10/360 (2%)
Query: 15 GFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAV 74
GF +N V + F + G + A VFD + D W +I G + E +
Sbjct: 156 GFDRNTAVGASFVYFYS---KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 75 LFYKRMQQGEPHV-VPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLI 133
+ +M V P+ T + LG++ G+ LH +K G+ + V++S+
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 134 HMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDA 193
Y + A+ F E+ ++D+ +W SII L G E+ D F M GM PD
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 194 TFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIF-R 252
++ G M + G+ H + R + + ++V NSL+ MY K + A ++F R
Sbjct: 333 VISCLINELGKMMLVPQGKAFHGFVIRHCFSLD-STVCNSLLSMYCKFELLSVAEKLFCR 391
Query: 253 SMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVD 312
+ N +WNTM+ G + + LF + +Q + D + V+ +CSH G V
Sbjct: 392 ISEEGNKEAWNTMLKGYGKMKCHVKCIELFRK-IQNLGIEIDSASATSVISSCSHIGAVL 450
Query: 313 EGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAA 372
G+ + + ++ T+ ++DL G+ G + A+ + + N I W +++A+
Sbjct: 451 LGKSLHCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMIAS 507
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 158/441 (35%), Positives = 243/441 (55%), Gaps = 13/441 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH + G N V ++ A G +N +F + + D WN++I
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYA---ETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 65 GNTNQ--PEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
+ + PE V F + G+ + TFS +L V L LGKQ+H LK +
Sbjct: 492 ARSERSLPEAVVCFLNAQRAGQK---LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNI 548
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK-DLVAWNSIIDCLVCCGKYNEALDFFT 181
+ A N+LI YG +++ ++F M + D V WNS+I + +ALD
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVW 608
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
M+Q+G R D + LSA ++ L G VH+C RA ++ V ++LVDMY+KC
Sbjct: 609 FMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV-VGSALVDMYSKC 667
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G ++ A F +M +N SWN+MI G A HG G EAL LF M + PD +TF+GV
Sbjct: 668 GRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGV 727
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
L ACSH G ++EG ++F+ MS Y + P ++H+ CM D+LGRAG +++ I+ MPM+
Sbjct: 728 LSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKP 787
Query: 362 NAIVWRSLLAA-CRTHG-NVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKE 419
N ++WR++L A CR +G +L +K + L +LEP ++ +YVLL NMYA+ G+W ++ K
Sbjct: 788 NVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKA 847
Query: 420 RRSMQERGVKKPEPGNSFVGL 440
R+ M++ VKK E G S+V +
Sbjct: 848 RKKMKDADVKK-EAGYSWVTM 867
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 176/383 (45%), Gaps = 10/383 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+E+H + TG + +G +V + G + A VF + D+ WN+MI G
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLV--NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+AV YK M++ + ++P +FT L L LG+Q+H +LKLG++
Sbjct: 391 DQNGCFIEAVERYKSMRRHD--ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGK-YNEALDFFTRM 183
+ V N+L+ +Y + ++F M D V+WNSII L + EA+ F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
++G + + TF LSA ++ G+ +H + E T+ N+L+ Y KCG
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT-ENALIACYGKCGE 567
Query: 244 VEEAYEIFRSM-KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
++ +IF M + ++ ++WN+MI G + +AL L MLQ R D + VL
Sbjct: 568 MDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG-QRLDSFMYATVL 626
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
A + ++ G R ++ V +VD+ + G ++ A MP+ N
Sbjct: 627 SAFASVATLERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-N 684
Query: 363 AIVWRSLLAACRTHGNVKLAEKV 385
+ W S+++ HG + A K+
Sbjct: 685 SYSWNSMISGYARHGQGEEALKL 707
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 164/375 (43%), Gaps = 15/375 (4%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH +++ + + +V +I + G + YA+ F ++ ++ WN++I +
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCI--GSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLG--SVVLGKQLHCSTLKLGV 122
A + MQ P +TF L+ L V L +Q+ C+ K G+
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSR--PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGL 239
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
V + L+ + + A ++F +M ++ V N ++ LV EA F
Sbjct: 240 LTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 183 MVQSGMRPDDATFVVTLSACGAMG-----ALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
M S + ++V+ LS+ L GR VH + + + + N LV+M
Sbjct: 300 M-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
YAKCG++ +A +F M K+ +SWN+MI GL +G EA+ + M + +++ P T
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL-PGSFT 417
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
+ L +C+ + G++ S + V ++ L G + E + +M
Sbjct: 418 LISSLSSCASLKWAKLGQQIHG-ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 358 PMECNAIVWRSLLAA 372
P E + + W S++ A
Sbjct: 477 P-EHDQVSWNSIIGA 490
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 192/467 (41%), Gaps = 59/467 (12%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
H+R+Y+ ++ + +I + GD A VFD + + W ++ G+
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLI---NAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSV--VLGKQLHCSTLKLGVEN 124
+ ++A++F + M + + + + F +L+ +GSV + G+Q+H KL
Sbjct: 80 NGEHKEALVFLRDMVK--EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 125 HAHVRNSLIHMY-GVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
A V N LI MY + + A F ++ K+ V+WNSII G A F+ M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 184 VQSGMRPDDATF--VVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
G RP + TF +VT + + + IQ++ L ++ V + LV +AK
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF-VGSGLVSAFAKS 256
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL-- 299
G++ A ++F M+ +N ++ N +++GL G EA LF +M V P+ L
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS 316
Query: 300 -------------------------------------GVLCACSHGGFVDEGRRYFDIMS 322
G++ + G + + RR F M+
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 323 RDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNV 379
+V + M+ L + G EA K+M + + S L++C +
Sbjct: 377 DKDSVS-----WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 380 KLAEKVRKHLLELE-PCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
KL +++ L+L + S L +YA TG NE K SM E
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
SF+ VG G+ + H K ++ ++ N+LI+ Y D +A ++F+EM
Sbjct: 7 LSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA--FG 211
++ V+W I+ G++ EAL F MV+ G+ + FV L AC +G++ FG
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 212 RWVHSCIQRATYLGEITSVSNSLVDMYAKC-GAVEEAYEIFRSMKGKNVISWNTMILGLA 270
R +H + + +Y + VSN L+ MY KC G+V A F ++ KN +SWN++I +
Sbjct: 124 RQIHGLMFKLSYAVDAV-VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLG-VLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
G+ A +F+ M Q + RP TF V ACS + R + +
Sbjct: 183 QAGDQRSAFRIFSSM-QYDGSRPTEYTFGSLVTTACS---LTEPDVRLLE------QIMC 232
Query: 330 TVKHYGCMVDLLGRAGLV 347
T++ G + DL +GLV
Sbjct: 233 TIQKSGLLTDLFVGSGLV 250
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 241/443 (54%), Gaps = 12/443 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+ +H+ +++ G ++ + +I+ A G + YA +FD + + D WN+MI G+
Sbjct: 152 RSVHSSLFKVGLERDVHINHSLIMMYA---KCGQVGYARKLFDEITERDTVSWNSMISGY 208
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ A+ +++M+ E PD T +L LG + G+ L + +
Sbjct: 209 SEAGYAKDAMDLFRKME--EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ + LI MYG D+++A ++F +M+ KD VAW ++I GK +EA F M
Sbjct: 267 STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME 326
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
++G+ PD T LSACG++GAL G+ + + + I V+ LVDMY KCG V
Sbjct: 327 KTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY-VATGLVDMYGKCGRV 385
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
EEA +F +M KN +WN MI A G+ EAL LF M V P ITF+GVL A
Sbjct: 386 EEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM----SVPPSDITFIGVLSA 441
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
C H G V +G RYF MS + + P ++HY ++DLL RAG+++EA+ ++ P + + I
Sbjct: 442 CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 501
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLEL-EPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
+ ++L AC +V + EK + L+E+ E ++ +YV+ +N+ A W+E +K R M
Sbjct: 502 MLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALM 561
Query: 424 QERGVKKPEPGNSFVGLPGIRLE 446
++RGV K PG S++ + G +E
Sbjct: 562 RDRGVVKT-PGCSWIEIEGELME 583
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 202/383 (52%), Gaps = 14/383 (3%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+N L++I A++ + + ++ K +V GD NY+ +F ++P+ + +N M
Sbjct: 50 VNQLRQIQAQMLLHSVEKPNFLIPK-------AVELGDFNYSSFLFSVTEEPNHYSFNYM 102
Query: 61 IRGFGNT-NQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
IRG NT N E A+ Y+RM+ + PD FT++F+ L + +G+ +H S K
Sbjct: 103 IRGLTNTWNDHEAALSLYRRMKFS--GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFK 160
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
+G+E H+ +SLI MY + A +LF+E+ +D V+WNS+I G +A+D
Sbjct: 161 VGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDL 220
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
F +M + G PD+ T V L AC +G L GR + + +G T + + L+ MY
Sbjct: 221 FRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEE-MAITKKIGLSTFLGSKLISMYG 279
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
KCG ++ A +F M K+ ++W MI + +G +EA LF EM ++ V PD T
Sbjct: 280 KCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM-EKTGVSPDAGTLS 338
Query: 300 GVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
VL AC G ++ G++ + + + ++Q + +VD+ G+ G VEEA + + MP+
Sbjct: 339 TVLSACGSVGALELGKQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV 397
Query: 360 ECNAIVWRSLLAACRTHGNVKLA 382
+ N W +++ A G+ K A
Sbjct: 398 K-NEATWNAMITAYAHQGHAKEA 419
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 233/425 (54%), Gaps = 11/425 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
H + GF NH + + V+ D A VFD + +PD W ++ F
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVD---ARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
+ E+A+ + M +G+ +VPD TF +L G L + GK++H + G+ ++
Sbjct: 242 NDLYEEALGLFYAMHRGKG-LVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNV 300
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
V +SL+ MYG + A Q+F M K+ V+W++++ G++ +A++ F M +
Sbjct: 301 VVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE- 359
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
D F L AC + A+ G+ +H R G + V ++L+D+Y K G ++
Sbjct: 360 ---KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI-VESALIDLYGKSGCIDS 415
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
A ++ M +N+I+WN M+ LA +G G EA++ F +M+++ + +PD I+F+ +L AC
Sbjct: 416 ASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI-KPDYISFIAILTACG 474
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVW 366
H G VDEGR YF +M++ Y ++P +HY CM+DLLGRAGL EEA L++ +A +W
Sbjct: 475 HTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLW 534
Query: 367 RSLLAACRTHGNV-KLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
LL C + + ++AE++ K ++ELEP + YVLL+NMY + G+ + R+ M
Sbjct: 535 GVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVR 594
Query: 426 RGVKK 430
RGV K
Sbjct: 595 RGVAK 599
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 181/377 (48%), Gaps = 15/377 (3%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
H + HA + ++G + V ++ P M VFD DA W +M+
Sbjct: 79 HGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG--MRETRRVFDGRFVKDAISWTSMMS 136
Query: 63 GFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
G+ + KA+ +F + + G + + FT S +K LG V LG+ H + G
Sbjct: 137 GYVTGKEHVKALEVFVEMVSFG---LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHG 193
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
E + + ++L ++YGV ++ A ++F+EM D++ W +++ Y EAL F
Sbjct: 194 FEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFY 253
Query: 182 RMVQ-SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
M + G+ PD +TF L+ACG + L G+ +H + +G V +SL+DMY K
Sbjct: 254 AMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLI-TNGIGSNVVVESSLLDMYGK 312
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG+V EA ++F M KN +SW+ ++ G +G +A+ +F EM ++++ F
Sbjct: 313 CGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY-----CFGT 367
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
VL AC+ V G+ R + ++DL G++G ++ A + M +
Sbjct: 368 VLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE-SALIDLYGKSGCIDSASRVYSKMSIR 426
Query: 361 CNAIVWRSLLAACRTHG 377
N I W ++L+A +G
Sbjct: 427 -NMITWNAMLSALAQNG 442
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 147/325 (45%), Gaps = 8/325 (2%)
Query: 69 QPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHV 128
Q +A+ E P + + LL+ + S + G Q H +K G+E +V
Sbjct: 41 QLTEAIRILNSTHSSEIPATPKLY--ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNV 98
Query: 129 RNSLIHMYGVM-KDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSG 187
NSL+ +Y + + ++F+ KD ++W S++ V ++ +AL+ F MV G
Sbjct: 99 GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG 158
Query: 188 MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS-VSNSLVDMYAKCGAVEE 246
+ ++ T + AC +G + GR H + T+ E +S++L +Y +
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVV--ITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
A +F M +VI W ++ + + EAL LF M + + PDG TF VL AC
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVW 366
+ + +G+ + + + V ++D+ G+ G V EA + M + N++ W
Sbjct: 277 NLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK-NSVSW 334
Query: 367 RSLLAACRTHGNVKLAEKVRKHLLE 391
+LL +G + A ++ + + E
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREMEE 359
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/391 (37%), Positives = 228/391 (58%), Gaps = 13/391 (3%)
Query: 42 AVSVFDRVDKPDA--FLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLK 99
A VFDR+ K D+ F WN++I G+ Q E A+ Y Q E V PD FTF +LK
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY--FQMAEDGVKPDRFTFPRVLK 203
Query: 100 IVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVA 159
GG+GSV +G+ +H +K G +V N+L+ MY DI A +F+ + +KD V+
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
WNS++ + G +EALD F MVQ+G+ PD V S + + GR +H +
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQLHGWVI 320
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
R E+ SV+N+L+ +Y+K G + +A IF M ++ +SWN +I ++H + L
Sbjct: 321 RRGMEWEL-SVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGL 376
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
F +M + N +PDGITF+ VL C++ G V++G R F +MS++Y + P ++HY CMV+
Sbjct: 377 KYFEQMHRAN-AKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVN 435
Query: 340 LLGRAGLVEEAY-ILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSS 398
L GRAG++EEAY ++++ M +E VW +LL AC HGN + E + L ELEP +
Sbjct: 436 LYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEH 495
Query: 399 DYVLLANMYASTGQWNEMSKERRSMQERGVK 429
++ LL +Y+ + ++ + R+ M +RG++
Sbjct: 496 NFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 195 FVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM 254
F L C ++ A+ G VH I L +S+ LV +YA CG E A+E+F M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIP-PYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 255 KGKNV--ISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVD 312
++ +WN++I G A G +A+ L+ +M E+ V+PD TF VL AC G V
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQM-AEDGVKPDRFTFPRVLKACGGIGSVQ 212
Query: 313 EGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
G + D++ + V +V + + G + +A + +P + + + W S+L
Sbjct: 213 IGEAIHRDLVKEGFGYDVYV--LNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLT 269
Query: 372 ACRTHG 377
HG
Sbjct: 270 GYLHHG 275
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 245/438 (55%), Gaps = 11/438 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IHA + TGF + V + + + AG A +F R+++ D W TMI G+
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLT---QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
P+KA+ Y+ M Q V PD T + +L LG + G +LH +K + +
Sbjct: 374 EYNFLPDKAIDTYRMMDQDS--VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ V N+LI+MY K I+ A +F + K++++W SII L + EAL F R +
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQM 490
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+ ++P+ T L+AC +GAL G+ +H+ + R T +G + N+L+DMY +CG +
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLR-TGVGLDDFLPNALLDMYVRCGRM 549
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
A+ F S K K+V SWN ++ G + G G+ + LF M++ V RPD ITF+ +LC
Sbjct: 550 NTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRV-RPDEITFISLLCG 607
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CS V +G YF M DY V P +KHY C+VDLLGRAG ++EA+ I+ MP+ +
Sbjct: 608 CSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
VW +LL ACR H + L E +H+ EL+ Y+LL N+YA G+W E++K RR M+
Sbjct: 667 VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMK 726
Query: 425 ERGVKKPEPGNSFVGLPG 442
E G+ + G S+V + G
Sbjct: 727 ENGL-TVDAGCSWVEVKG 743
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 178/346 (51%), Gaps = 5/346 (1%)
Query: 29 FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVV 88
F A+ V G++ A VF ++ + + F WN ++ G+ ++A+ Y RM V
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW-VGGVK 193
Query: 89 PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQL 148
PD +TF +L+ GG+ + GK++H ++ G E V N+LI MY D+++A L
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 149 FEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL 208
F+ M +D+++WN++I G +E L+ F M + PD T +SAC +G
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 313
Query: 209 AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
GR +H+ + + +I SV NSL MY G+ EA ++F M+ K+++SW TMI G
Sbjct: 314 RLGRDIHAYVITTGFAVDI-SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
+ +A+ + M+ ++ V+PD IT VL AC+ G +D G + + +
Sbjct: 373 YEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACR 374
+ ++++ + +++A + N+P + N I W S++A R
Sbjct: 432 YVIVANN-LINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLR 475
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 13/260 (5%)
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK- 119
+ G + E+A+ MQ E V D F L+++ + G +++ L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQ--ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSS 123
Query: 120 ---LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
LGVE + N+ + M+ ++ A +F +M ++L +WN ++ G ++EA
Sbjct: 124 MSSLGVE----LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEA 179
Query: 177 LDFFTRMVQ-SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
+ + RM+ G++PD TF L CG + LA G+ VH + R Y +I V N+L+
Sbjct: 180 MCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDI-DVVNALI 238
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDG 295
MY KCG V+ A +F M +++ISWN MI G +G E L LF M + V PD
Sbjct: 239 TMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM-RGLSVDPDL 297
Query: 296 ITFLGVLCACSHGGFVDEGR 315
+T V+ AC G GR
Sbjct: 298 MTLTSVISACELLGDRRLGR 317
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 120/301 (39%), Gaps = 53/301 (17%)
Query: 171 GKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITS 229
GK EA+ M + + D+ FV + C A G V+S + + LG
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLG--VE 130
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
+ N+ + M+ + G + +A+ +F M +N+ SWN ++ G A G EA+ L+ ML
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 290 VVRPDGITFLGVLCACSHGGFVDEGR-RYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVE 348
V+PD TF VL C GG D R + + Y + + ++ + + G V+
Sbjct: 191 GVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 349 EAYILIKNMPMECNAIVWR-----------------------------------SLLAAC 373
A +L MP + I W S+++AC
Sbjct: 249 SARLLFDRMPRR-DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 374 RTHGNVKLAEKVRKHLL------ELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERG 427
G+ +L + +++ ++ C+S L MY + G W E K M+ +
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNS-----LTQMYLNAGSWREAEKLFSRMERKD 362
Query: 428 V 428
+
Sbjct: 363 I 363
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 241/435 (55%), Gaps = 10/435 (2%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
E R+ +GF N + ++ C S GD+ +F + +P WN M+ G+
Sbjct: 336 EFLTRMRDSGFQPNEVTCISVLGACFRS---GDVETGRRIFSSIPQPSVSAWNAMLSGYS 392
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
N E+A+ +++MQ ++ PD T S +L L + GKQ+H ++ + +
Sbjct: 393 NYEHYEEAISNFRQMQF--QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKN 450
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNK-DLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+H+ + LI +Y + +E + +F++ +N+ D+ WNS+I +AL F RM
Sbjct: 451 SHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMH 510
Query: 185 QSG-MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
Q+ + P++ +F LS+C + +L GR H + ++ Y+ + + V +L DMY KCG
Sbjct: 511 QTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSD-SFVETALTDMYCKCGE 569
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
++ A + F ++ KN + WN MI G +G G EA+ L+ +M+ +PDGITF+ VL
Sbjct: 570 IDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLT 628
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
ACSH G V+ G M R + ++P + HY C+VD LGRAG +E+A L + P + ++
Sbjct: 629 ACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSS 688
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
++W LL++CR HG+V LA +V + L+ L+P S+ YVLL+N Y+S QW++ + + M
Sbjct: 689 VLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLM 748
Query: 424 QERGVKKPEPGNSFV 438
+ V K PG S+
Sbjct: 749 NKNRVHKT-PGQSWT 762
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 158/342 (46%), Gaps = 19/342 (5%)
Query: 29 FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVV 88
F GD+ A VFD + + D WN MI EKA++ YKRM +
Sbjct: 78 FLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC--DGFL 135
Query: 89 PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDI-ETAHQ 147
P FT + +L + V G + H +K G++ + V N+L+ MY I + +
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 148 LFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATF--VVTLSA---- 201
+FE + + V++ ++I L K EA+ F M + G++ D ++++SA
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 202 CGAMGAL---AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKN 258
C ++ + G+ +H R + G++ ++NSL+++YAK + A IF M N
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDL-HLNNSLLEIYAKNKDMNGAELIFAEMPEVN 314
Query: 259 VISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYF 318
V+SWN MI+G +++ M +++ +P+ +T + VL AC G V+ GRR F
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRM-RDSGFQPNEVTCISVLGACFRSGDVETGRRIF 373
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
+ QP+V + M+ EEA + M +
Sbjct: 374 SSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 48/294 (16%)
Query: 39 MNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLL 98
++Y V VF+ + +P+ + +I G N+ +AV ++ M E V D+ S +L
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM--CEKGVQVDSVCLSNIL 247
Query: 99 KIVG---GLGSVV------LGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLF 149
I G S+ LGKQ+HC L+LG H+ NSL+ +Y KD+ A +F
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 150 EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA 209
EM ++V+WN +I + +++++F TRM SG +P++ T + L AC
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------- 360
Query: 210 FGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGL 269
+ G VE IF S+ +V +WN M+ G
Sbjct: 361 -----------------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGY 391
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
+++ + EA++ F +M +N ++PD T +L +C+ F++ G++ ++ R
Sbjct: 392 SNYEHYEEAISNFRQMQFQN-LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 241/438 (55%), Gaps = 12/438 (2%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF- 64
++HA + + V +I A D A VFD D L+N MI G+
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD---ARKVFDIFAAADVVLFNAMIEGYS 427
Query: 65 --GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G + +A+ ++ M+ + P TF LL+ L S+ L KQ+H K G+
Sbjct: 428 RLGTQWELHEALNIFRDMRF--RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
++LI +Y ++ + +F+EM KDLV WNS+ V + EAL+ F
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
+ S RPD+ TF ++A G + ++ G+ H C L ++N+L+DMYAKCG
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFH-CQLLKRGLECNPYITNALLDMYAKCG 604
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ E+A++ F S ++V+ WN++I A+HG G +AL + +M+ E + P+ ITF+GVL
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGI-EPNYITFVGVL 663
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
ACSH G V++G + F++M R + ++P +HY CMV LLGRAG + +A LI+ MP +
Sbjct: 664 SACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPA 722
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
AIVWRSLL+ C GNV+LAE + + +P S + +L+N+YAS G W E K R
Sbjct: 723 AIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRER 782
Query: 423 MQERGVKKPEPGNSFVGL 440
M+ GV K EPG S++G+
Sbjct: 783 MKVEGVVK-EPGRSWIGI 799
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 205/411 (49%), Gaps = 18/411 (4%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++ + + ++GF ++ V +I F + G+++YA VFD + + W TMI G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDF---YLKDGNIDYARLVFDALPEKSTVTWTTMISGCV 225
Query: 66 NTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ ++ LFY+ M E +VVPD + S +L L + GKQ+H L+ G+E
Sbjct: 226 KMGRSYVSLQLFYQLM---EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM 282
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
A + N LI Y + AH+LF M NK++++W +++ + EA++ FT M
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+ G++PD L++C ++ AL FG VH+ +A LG + V+NSL+DMYAKC +
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN-LGNDSYVTNSLIDMYAKCDCL 401
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNG---TEALTLFAEMLQENVVRPDGITFLGV 301
+A ++F +V+ +N MI G + G EAL +F +M + ++RP +TF+ +
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSL 460
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
L A + + ++ +M + Y + + ++D+ ++++ ++ M ++
Sbjct: 461 LRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK- 518
Query: 362 NAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHS-SDYVLLANMYASTG 411
+ ++W S+ A E+ LEL+ D ANM + G
Sbjct: 519 DLVIWNSMFAGYVQQSE---NEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 21/307 (6%)
Query: 16 FHQNHLVVGKIIVF------------CAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
H ++V G+IIV+ + AG M YA VF+++ + + W+TM+
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK----QLHCSTLK 119
+ E++++ + + P+ + S ++ GL G+ QL +K
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKD-SPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVK 176
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G + +V LI Y +I+ A +F+ + K V W ++I V G+ +L
Sbjct: 177 SGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
F ++++ + PD LSAC + L G+ +H+ I R L S+ N L+D Y
Sbjct: 237 FYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG-LEMDASLMNVLIDSYV 295
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
KCG V A+++F M KN+ISW T++ G + EA+ LF M + ++PD
Sbjct: 296 KCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACS 354
Query: 300 GVLCACS 306
+L +C+
Sbjct: 355 SILTSCA 361
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 29/308 (9%)
Query: 113 LHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGK 172
+H + G+E ++ N LI++Y + A ++FE+M ++LV+W++++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 173 YNEALDFFTRMVQSGM-RPDDATFVVTLSACGAMGALAFGRW---------VHSCIQRAT 222
Y E+L F ++ P++ + AC + GRW V S R
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWMVFQLQSFLVKSGFDRDV 183
Query: 223 YLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLF 282
Y+G + L+D Y K G ++ A +F ++ K+ ++W TMI G G +L LF
Sbjct: 184 YVGTL------LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLG 342
+++++NVV PDG VL ACS F++ G++ + R Y ++ ++D
Sbjct: 238 YQLMEDNVV-PDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYV 295
Query: 343 RAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVL 402
+ G V A+ L MP + N I W +LL+ + + + K +EL S + L
Sbjct: 296 KCGRVIAAHKLFNGMPNK-NIISWTTLLSGYKQNA-------LHKEAMELFTSMSK-FGL 346
Query: 403 LANMYAST 410
+MYA +
Sbjct: 347 KPDMYACS 354
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 246/483 (50%), Gaps = 50/483 (10%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K++H + QN + VG +V + G M+ A +VF + D WN M+ G+
Sbjct: 249 KQLHCFAVTSEMIQN-MFVGNCLV--DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 65 GNTNQPEKAVLFYKRMQQGE---------------------------------PHVVPDT 91
+ E AV +++MQ+ + + P+
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE-------NHAHVRNSLIHMYGVMKDIET 144
T +L +G+++ GK++HC +K ++ + V N LI MY K ++T
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 145 AHQLFEEMLNK--DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSG--MRPDDATFVVTLS 200
A +F+ + K D+V W +I G N+AL+ + M + RP+ T L
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 201 ACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVI 260
AC ++ AL G+ +H+ R VSN L+DMYAKCG++ +A +F +M KN +
Sbjct: 486 ACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEV 545
Query: 261 SWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDI 320
+W +++ G HG G EAL +F EM + + DG+T L VL ACSH G +D+G YF+
Sbjct: 546 TWTSLMTGYGMHGYGEEALGIFDEMRRIGF-KLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 321 MSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVK 380
M + V P +HY C+VDLLGRAG + A LI+ MPME +VW + L+ CR HG V+
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 381 LAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV-G 439
L E + + EL H Y LL+N+YA+ G+W ++++ R M+ +GVKK PG S+V G
Sbjct: 665 LGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKK-RPGCSWVEG 723
Query: 440 LPG 442
+ G
Sbjct: 724 IKG 726
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 207/443 (46%), Gaps = 56/443 (12%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDA--FLWN 58
++ +K IH ++ G +L I + +V G +++AVS+ R DA + WN
Sbjct: 41 ISQVKLIHQKLLSFGILTLNLTSHLISTYISV----GCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 59 TMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
++IR +G+ K + + M PD +TF F+ K G + SV G+ H +L
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLS--WTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
G ++ V N+L+ MY + + A ++F+EM D+V+WNSII+ GK AL+
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 179 FFTRMVQS-GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
F+RM G RPD+ T V L C ++G + G+ +H C + + + V N LVDM
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH-CFAVTSEMIQNMFVGNCLVDM 273
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV------- 290
YAKCG ++EA +F +M K+V+SWN M+ G + G +A+ LF +M +E +
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 291 ---------------------------VRPDGITFLGVLCACSHGGFVDEGRRY------ 317
++P+ +T + VL C+ G + G+
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 318 --FDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM-PMECNAIVWRSLLAACR 374
D+ + + V + ++D+ + V+ A + ++ P E + + W ++
Sbjct: 394 YPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 375 THGNVKLAEKVRKHLLELEPCHS 397
HG+ A ++ + E E C +
Sbjct: 452 QHGDANKALELLSEMFE-EDCQT 473
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 10/277 (3%)
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
WNS+I G N+ L F M PD+ TF ACG + ++ G H+
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
++ + V N+LV MY++C ++ +A ++F M +V+SWN++I A G AL
Sbjct: 155 VTGFISNVF-VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
+F+ M E RPD IT + VL C+ G G++ +Q C+VD
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVD 272
Query: 340 LLGRAGLVEEAYILIKNMPMECNAIVWRSLLAAC----RTHGNVKLAEKVRKHLLELEPC 395
+ + G+++EA + NM ++ + + W +++A R V+L EK+++ ++++
Sbjct: 273 MYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 396 HSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPE 432
S + + YA G E R M G+K E
Sbjct: 332 TWSAAI---SGYAQRGLGYEALGVCRQMLSSGIKPNE 365
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 222/406 (54%), Gaps = 38/406 (9%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
+N MI G+ N ++A+ +RM + D FT+ +++ G + LGKQ+H
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIEL--DEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 117 TLKLGVENHA-HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE 175
L+ E+ + H NSL+ +Y + A +FE+M KDLV+WN+++ V G E
Sbjct: 312 VLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 176 A-------------------------------LDFFTRMVQSGMRPDDATFVVTLSACGA 204
A L F+ M + G P D F + +C
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 205 MGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNT 264
+GA G+ H+ + + + + S N+L+ MYAKCG VEEA ++FR+M + +SWN
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSL-SAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 265 MILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRD 324
+I L HG+G EA+ ++ EML++ + RPD IT L VL ACSH G VD+GR+YFD M
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGI-RPDRITLLTVLTACSHAGLVDQGRKYFDSMETV 547
Query: 325 YNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEK 384
Y + P HY ++DLL R+G +A +I+++P + A +W +LL+ CR HGN++L
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGII 607
Query: 385 VRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKK 430
L L P H Y+LL+NM+A+TGQW E+++ R+ M++RGVKK
Sbjct: 608 AADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKK 653
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 207/496 (41%), Gaps = 127/496 (25%)
Query: 5 KEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPDAF-------- 55
+ +H I GF ++ ++I V+C S ++NYA +FD + +PD
Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYCKSS----ELNYARQLFDEISEPDKIARTTMVSG 89
Query: 56 -------------------------LWNTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVP 89
++N MI GF + N A+ LF K +G P
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG---FKP 146
Query: 90 DTFTFSFLLKIVGGLGSVVLGK----QLHCSTLKLGVENHAHVRNSLIHMYGVMKD---- 141
D FTF+ ++ GL V + Q H + LK G V N+L+ +Y
Sbjct: 147 DNFTFA---SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 142 IETAHQLFEEMLNKD--------------------------------LVAWNSIIDCLVC 169
+ +A ++F+E+L KD LVA+N++I V
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 170 CGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS 229
G Y EAL+ RMV SG+ D+ T+ + AC G L G+ VH+ + R
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS--FH 321
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
NSLV +Y KCG +EA IF M K+++SWN ++ G S G+ EA +F EM ++N
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 290 VVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR------DYNVQPTVKHYG-------- 335
+ ++++ ++ + GF +EG + F M R DY +K
Sbjct: 382 I-----LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 336 --------------------CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRT 375
++ + + G+VEEA + + MP +++ W +L+AA
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQ 495
Query: 376 HGNVKLAEKVRKHLLE 391
HG+ A V + +L+
Sbjct: 496 HGHGAEAVDVYEEMLK 511
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 131/303 (43%), Gaps = 40/303 (13%)
Query: 5 KEIHARIYQT---GFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
K++HA + + FH ++ +V ++ G + A ++F+++ D WN ++
Sbjct: 306 KQVHAYVLRREDFSFHFDNSLV-------SLYYKCGKFDEARAIFEKMPAKDLVSWNALL 358
Query: 62 RGFGNTNQPEKAVLFYKRMQQ------------------GEPHVV-----------PDTF 92
G+ ++ +A L +K M++ GE + P +
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM 152
FS +K LG+ G+Q H LK+G ++ N+LI MY +E A Q+F M
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 153 LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGR 212
D V+WN++I L G EA+D + M++ G+RPD T + L+AC G + GR
Sbjct: 479 PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVIS-WNTMILGLAS 271
++ + L+D+ + G +A + S+ K W ++ G
Sbjct: 539 KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRV 598
Query: 272 HGN 274
HGN
Sbjct: 599 HGN 601
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/481 (34%), Positives = 250/481 (51%), Gaps = 46/481 (9%)
Query: 1 MNHLKEIHARIYQTG-FHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
++ +K+IH I +G + + ++ F + G+ A VF R+ PD +N
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKF---YMELGNFGVAEKVFARMPHPDVSSFNV 202
Query: 60 MIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
MI G+ +A+ L++K + G + PD +T LL G L + LGK +H
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDG---IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIE 259
Query: 119 KLG--VENHAHVRNSLIHMY------GVMK-------------------------DIETA 145
+ G ++ + N+L+ MY G+ K D+E A
Sbjct: 260 RRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAA 319
Query: 146 HQLFEEMLNKDLVAWNSII--DCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACG 203
+F++M +DLV+WNS++ C + F+ + ++PD T V +S
Sbjct: 320 QAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAA 379
Query: 204 AMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWN 263
G L+ GRWVH + R G+ +S++L+DMY KCG +E A+ +F++ K+V W
Sbjct: 380 NNGELSHGRWVHGLVIRLQLKGD-AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWT 438
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
+MI GLA HGNG +AL LF M QE V P+ +T L VL ACSH G V+EG F+ M
Sbjct: 439 SMITGLAFHGNGQQALQLFGRM-QEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKD 497
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAY-ILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
+ P +HYG +VDLL RAG VEEA I+ K MPM + +W S+L+ACR +++ A
Sbjct: 498 KFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETA 557
Query: 383 EKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
E LL+LEP YVLL+N+YA+ G+W K R +M+ RGVKK +S VG+ G
Sbjct: 558 ELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEG 617
Query: 443 I 443
+
Sbjct: 618 L 618
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 207/447 (46%), Gaps = 52/447 (11%)
Query: 2 NHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVF-DRVDKPDAFLWNTM 60
N K++ A+I + + + ++I F A++ P +++ A +F + P+ F++NTM
Sbjct: 48 NQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPE-NLDLAKLLFLNFTPNPNVFVYNTM 106
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
I ++ + Y M + V PD TF +L+K L V KQ+HC +
Sbjct: 107 ISAVSSSKN--ECFGLYSSMIRH--RVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVS 159
Query: 121 GVENHA-HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G + ++ NSL+ Y + + A ++F M + D+ ++N +I G EAL
Sbjct: 160 GCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKL 219
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS----VSNSLV 235
+ +MV G+ PD+ T + L CG + + G+ VH I+R G + S +SN+L+
Sbjct: 220 YFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR---GPVYSSNLILSNALL 276
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV----- 290
DMY KC A F +MK K++ SWNTM++G G+ A +F +M + ++
Sbjct: 277 DMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNS 336
Query: 291 ---------------------------VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
V+PD +T + ++ ++ G + GR ++ R
Sbjct: 337 LLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR 396
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAE 383
++ ++D+ + G++E A+++ K E + +W S++ HGN + A
Sbjct: 397 -LQLKGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGNGQQAL 454
Query: 384 KVRKHLLELEPCHSSDYVLLANMYAST 410
++ + E E ++ LLA + A +
Sbjct: 455 QLFGRMQE-EGVTPNNVTLLAVLTACS 480
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 238/427 (55%), Gaps = 12/427 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF-G 65
IH + G ++ V ++ A G M A VFD + ++ LW +++G+
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYA---QLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG-VEN 124
+ PE LF G + D T L+K G + + +GK +H +++ ++
Sbjct: 188 YSKDPEVFRLFCLMRDTG---LALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+++ S+I MY + ++ A +LFE +++++V W ++I C + EA D F +M+
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS-NSLVDMYAKCGA 243
+ + P+ T L +C ++G+L G+ VH + R E+ +V+ S +DMYA+CG
Sbjct: 305 RESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI--EMDAVNFTSFIDMYARCGN 362
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
++ A +F M +NVISW++MI +G EAL F +M +NVV P+ +TF+ +L
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVV-PNSVTFVSLLS 421
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
ACSH G V EG + F+ M+RDY V P +HY CMVDLLGRAG + EA I NMP++ A
Sbjct: 422 ACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMA 481
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
W +LL+ACR H V LA ++ + LL +EP SS YVLL+N+YA G W ++ RR M
Sbjct: 482 SAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKM 541
Query: 424 QERGVKK 430
+G +K
Sbjct: 542 GIKGYRK 548
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 194/381 (50%), Gaps = 12/381 (3%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVD--KPDAFLWN 58
+NH +++HA++ GF ++ +V+G + + + +++A S F+R+ K + WN
Sbjct: 20 LNHTQQVHAKVIIHGF-EDEVVLGSSLT--NAYIQSNRLDFATSSFNRIPCWKRNRHSWN 76
Query: 59 TMIRGFGNTNQP--EKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
T++ G+ + +L Y RM++ V D+F F +K GLG + G +H
Sbjct: 77 TILSGYSKSKTCCYSDVLLLYNRMRRHCDGV--DSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
+K G++ +V SL+ MY + +E+A ++F+E+ ++ V W ++ + K E
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
F M +G+ D T + + ACG + A G+ VH R +++ + + S++D
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 237 MYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGI 296
MY KC ++ A ++F + +NV+ W T+I G A EA LF +ML+E+++ P+
Sbjct: 255 MYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL-PNQC 313
Query: 297 TFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
T +L +CS G + G+ M R+ ++ ++ +D+ R G ++ A +
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDM 372
Query: 357 MPMECNAIVWRSLLAACRTHG 377
MP E N I W S++ A +G
Sbjct: 373 MP-ERNVISWSSMINAFGING 392
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 238/428 (55%), Gaps = 14/428 (3%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+H + GF + V +++ V ++N A +FD + +P+ W ++I G+ +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVI---SYVKLKEINTARKLFDEMCEPNVVSWTSVISGYND 107
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
+P+ A+ +++M + P V P+ +TF+ + K L +GK +H G+ +
Sbjct: 108 MGKPQNALSMFQKMHEDRP-VPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNI 166
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLN--KDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V +SL+ MYG D+ETA ++F+ M+ +++V+W S+I + +EA++ F R
Sbjct: 167 VVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSF 225
Query: 185 QSGMRPDDAT---FVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
+ + D A +SAC ++G L +G+ H + R Y T V+ SL+DMYAKC
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESN-TVVATSLLDMYAKC 284
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G++ A +IF ++ +VIS+ +MI+ A HG G A+ LF EM+ + P+ +T LGV
Sbjct: 285 GSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRI-NPNYVTLLGV 343
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM-- 359
L ACSH G V+EG Y +M+ Y V P +HY C+VD+LGR G V+EAY L K + +
Sbjct: 344 LHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGA 403
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKE 419
E A++W +LL+A R HG V++ + K L++ +S Y+ L+N YA +G W +
Sbjct: 404 EQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESL 463
Query: 420 RRSMQERG 427
R M+ G
Sbjct: 464 RLEMKRSG 471
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 18/304 (5%)
Query: 85 PHVVPDTF---TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKD 141
P D F T +FL+ + + LH TLKLG + N L+ Y +K+
Sbjct: 20 PQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKE 79
Query: 142 IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS-GMRPDDATFVVTLS 200
I TA +LF+EM ++V+W S+I GK AL F +M + + P++ TF
Sbjct: 80 INTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 201 ACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM--KGKN 258
AC A+ G+ +H+ ++ + I VS+SLVDMY KC VE A +F SM G+N
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIV-VSSSLVDMYGKCNDVETARRVFDSMIGYGRN 198
Query: 259 VISWNTMILGLASHGNGTEALTLF----AEMLQENVVRPDGITFLGVLCACSHGGFVDEG 314
V+SW +MI A + G EA+ LF A + + R + V+ ACS G + G
Sbjct: 199 VVSWTSMITAYAQNARGHEAIELFRSFNAALTSD---RANQFMLASVISACSSLGRLQWG 255
Query: 315 RRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV-WRSLLAAC 373
+ +++R TV ++D+ + G + A + + + C++++ + S++ A
Sbjct: 256 KVAHGLVTRGGYESNTVVATS-LLDMYAKCGSLSCAEKIF--LRIRCHSVISYTSMIMAK 312
Query: 374 RTHG 377
HG
Sbjct: 313 AKHG 316
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 113/274 (41%), Gaps = 8/274 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRV--DKPDAFLWNTMIR 62
K IHAR+ +G +N +V ++ D+ A VFD + + W +MI
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYG---KCNDVETARRVFDSMIGYGRNVVSWTSMIT 207
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
+ + +A+ ++ + F + ++ LG + GK H + G
Sbjct: 208 AYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGY 267
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
E++ V SL+ MY + A ++F + ++++ S+I G A+ F
Sbjct: 268 ESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDE 327
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
MV + P+ T + L AC G + G S + + + +VDM + G
Sbjct: 328 MVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFG 387
Query: 243 AVEEAYEIFRSMK---GKNVISWNTMILGLASHG 273
V+EAYE+ ++++ + + W ++ HG
Sbjct: 388 RVDEAYELAKTIEVGAEQGALLWGALLSAGRLHG 421
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 220/406 (54%), Gaps = 6/406 (1%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G M+ A +F ++ K D W TM+ GF + KAV FY+ MQ D
Sbjct: 165 GKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN--EGFGRDRVVMLG 222
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
LL+ G LG +G+ +H + G+ + V SL+ MY + IE A ++F M+ K
Sbjct: 223 LLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT 282
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
V+W S+I G N+A + M G +PD T V L AC +G+L GR VH
Sbjct: 283 AVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHC 342
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
I + L +T+ +L+DMY+KCGA+ + EIF + K+++ WNTMI HGNG
Sbjct: 343 YILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQ 400
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
E ++LF +M + N+ PD TF +L A SH G V++G+ +F +M Y +QP+ KHY C
Sbjct: 401 EVVSLFLKMTESNI-EPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVC 459
Query: 337 MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCH 396
++DLL RAG VEEA +I + ++ +W +LL+ C H N+ + + +L+L P
Sbjct: 460 LIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDS 519
Query: 397 SSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
L++N +A+ +W E++K R+ M+ ++K PG S + + G
Sbjct: 520 IGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKV-PGYSAIEVNG 564
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 201/413 (48%), Gaps = 19/413 (4%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGK-IIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
H+ +IHA + TG N + + +I C G+++YA VFD + + ++N+MI
Sbjct: 32 HITQIHAFVISTGNLLNGSSISRDLIASCG---RIGEISYARKVFDELPQRGVSVYNSMI 88
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVL--GKQLHCSTLK 119
+ P++ + Y +M + PD+ TF+ +K L +VL G+ + C +
Sbjct: 89 VVYSRGKNPDEVLRLYDQMIA--EKIQPDSSTFTMTIK--ACLSGLVLEKGEAVWCKAVD 144
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G +N V +S++++Y ++ A LF +M +D++ W +++ GK +A++F
Sbjct: 145 FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
+ M G D + L A G +G GR VH + R T L V SLVDMYA
Sbjct: 205 YREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYR-TGLPMNVVVETSLVDMYA 263
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
K G +E A +F M K +SW ++I G A +G +A EM Q +PD +T +
Sbjct: 264 KVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEM-QSLGFQPDLVTLV 322
Query: 300 GVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
GVL ACS G + GR + I+ R + T ++D+ + G + + + +++
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT---ALMDMYSKCGALSSSREIFEHVG 379
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE--LEPCHSSDYVLLANMYAS 409
+ + + W ++++ HGN + + + E +EP H++ LL+ + S
Sbjct: 380 RK-DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHS 431
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 252/497 (50%), Gaps = 71/497 (14%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
L+ A + +T +Q+ ++ + I C ++ AVS ++ +P+ F++N + +G
Sbjct: 789 LESALAAMIKTSLNQDCRLMNQFITAC---TSFKRLDLAVSTMTQMQEPNVFVYNALFKG 845
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
F + P +++ Y RM + V P ++T+S L+K + G+ L K G
Sbjct: 846 FVTCSHPIRSLELYVRMLRDS--VSPSSYTYSSLVK--ASSFASRFGESLQAHIWKFGFG 901
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSII------------------- 164
H ++ +LI Y I A ++F+EM +D +AW +++
Sbjct: 902 FHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQM 961
Query: 165 --------DCLVC----CGKYNEALDFFTRM----------------------------- 183
+CL+ G +A F +M
Sbjct: 962 SEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 1021
Query: 184 --VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
++ G+ PD+ T +SAC +G L G+ VH + ++ ++ + ++LVDMY+KC
Sbjct: 1022 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVY-IGSALVDMYSKC 1080
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G++E A +F ++ KN+ WN++I GLA+HG EAL +FA+M E+ V+P+ +TF+ V
Sbjct: 1081 GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMES-VKPNAVTFVSV 1139
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
AC+H G VDEGRR + M DY++ V+HYG MV L +AGL+ EA LI NM E
Sbjct: 1140 FTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEP 1199
Query: 362 NAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERR 421
NA++W +LL CR H N+ +AE L+ LEP +S Y LL +MYA +W ++++ R
Sbjct: 1200 NAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRG 1259
Query: 422 SMQERGVKKPEPGNSFV 438
M+E G++K PG S +
Sbjct: 1260 RMRELGIEKICPGTSSI 1276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 134/351 (38%), Gaps = 68/351 (19%)
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
L KI+ + L + + +K + + N I K ++ A +M +
Sbjct: 776 LKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
+ +N++ V C +L+ + RM++ + P T+ + A A FG + +
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF--ASRFGESLQA 893
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTM----------- 265
I + + G + +L+D Y+ G + EA ++F M ++ I+W TM
Sbjct: 894 HIWKFGF-GFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 952
Query: 266 --------------------ILGLASHGNGTEALTLFAEMLQENVVR------------- 292
I G GN +A +LF +M ++++
Sbjct: 953 SANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKR 1012
Query: 293 -----------------PDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHY 334
PD +T V+ AC+H G ++ G+ + + + + +
Sbjct: 1013 YREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIG-- 1070
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV 385
+VD+ + G +E A ++ N+P + N W S++ HG + A K+
Sbjct: 1071 SALVDMYSKCGSLERALLVFFNLPKK-NLFCWNSIIEGLAAHGFAQEALKM 1120
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 263/487 (54%), Gaps = 45/487 (9%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
MN +K++HA +TG + ++ ++++ +P ++ YA +FD FL+N +
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLL-----IP--NLVYARKLFDHHQNSCTFLYNKL 53
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLH------ 114
I+ + +QP ++++ Y + + P TF+F+ S + LH
Sbjct: 54 IQAYYVHHQPHESIVLYNLLSFDG--LRPSHHTFNFIFAASASFSSARPLRLLHSQFFRS 111
Query: 115 --------CSTL-----KLGV------------ENHAHVRNSLIHMYGVMKDIETAHQLF 149
C+TL KLG + V N++I Y D++ A +LF
Sbjct: 112 GFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELF 171
Query: 150 EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS-GMRPDDATFVVTLSACGAMGAL 208
+ M K++ +W ++I G Y+EAL F M + ++P+ T V L AC +G L
Sbjct: 172 DSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGEL 231
Query: 209 AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM-KGKNVISWNTMIL 267
GR + + + I V N+ ++MY+KCG ++ A +F + +N+ SWN+MI
Sbjct: 232 EIGRRLEGYARENGFFDNIY-VCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIG 290
Query: 268 GLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNV 327
LA+HG EALTLFA+ML+E +PD +TF+G+L AC HGG V +G+ F M + +
Sbjct: 291 SLATHGKHDEALTLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRK 387
P ++HYGCM+DLLGR G ++EAY LIK MPM+ +A+VW +LL AC HGNV++AE +
Sbjct: 350 SPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASE 409
Query: 388 HLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLEN 447
L +LEP + + V+++N+YA+ +W+ + + R+ M++ + K + FV + G+ +
Sbjct: 410 ALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEV-GVDVHK 468
Query: 448 ETAERLS 454
T E S
Sbjct: 469 FTVEDKS 475
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 235/434 (54%), Gaps = 18/434 (4%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++H++I++ GF + V ++ A G M A + FD + W +I G+
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYA---KFGKMGCARNAFDEMPHRSEVSWTALISGYI 155
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+ + A + +M PHV D ++ ++ G + ++L V
Sbjct: 156 RCGELDLASKLFDQM----PHV-KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITW 210
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM-V 184
++IH Y +KDI+ A +LF+ M ++LV+WN++I + E + F M
Sbjct: 211 T----TMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQA 266
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+ + PDD T + L A GAL+ G W H +QR L + V +++DMY+KCG +
Sbjct: 267 TTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKK-LDKKVKVCTAILDMYSKCGEI 325
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
E+A IF M K V SWN MI G A +GN AL LF M+ E +PD IT L V+ A
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE--KPDEITMLAVITA 383
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
C+HGG V+EGR++F +M R+ + ++HYGCMVDLLGRAG ++EA LI NMP E N I
Sbjct: 384 CNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGI 442
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
+ S L+AC + +++ AE++ K +ELEP + +YVLL N+YA+ +W++ + M+
Sbjct: 443 ILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMR 502
Query: 425 ERGVKKPEPGNSFV 438
+ KK E G S +
Sbjct: 503 KNQAKK-EVGCSLI 515
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 156/355 (43%), Gaps = 12/355 (3%)
Query: 29 FCAVSVPAGDMNYAVSVFD-RVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHV 87
F +S A + YA +FD R + D+FL N+MI+ + T Q + Y+ +++ E
Sbjct: 16 FLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRK-ETCF 74
Query: 88 VPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQ 147
PD FTF+ L K V G QLH + G +V ++ MY + A
Sbjct: 75 APDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 148 LFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
F+EM ++ V+W ++I + CG+ + A F +M D + + G
Sbjct: 135 AFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGD 191
Query: 208 LAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMIL 267
+ R + + T + T ++ Y ++ A ++F +M +N++SWNTMI
Sbjct: 192 MTSARRLFDEMTHKTVITWTT-----MIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIG 246
Query: 268 GLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNV 327
G + E + LF EM + PD +T L VL A S G + G + R +
Sbjct: 247 GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK-KL 305
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
VK ++D+ + G +E+A + MP E W +++ +GN + A
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNARAA 359
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 237/446 (53%), Gaps = 20/446 (4%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ +LK+IHA+I G + + K++ + ++YA+S+ ++ P FL+NT+
Sbjct: 22 LQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC----LSYALSILRQIPNPSVFLYNTL 77
Query: 61 IRGF---GNTNQPEKAVLFYKRMQQGEPHVV-PDTFTFSFLLKIVGGLGSVVL-GKQLHC 115
I N+ Q A Y ++ + V P+ FT+ L K G G+ LH
Sbjct: 78 ISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHA 137
Query: 116 STLKL--GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKY 173
LK V + V+ +L+ Y + A LFE + DL WN+++ +
Sbjct: 138 HVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEI 197
Query: 174 N---EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV 230
+ E L F RM +RP++ + V + +C +G G W H + + L V
Sbjct: 198 DSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN-LTLNQFV 253
Query: 231 SNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
SL+D+Y+KCG + A ++F M ++V +N MI GLA HG G E + L+ ++ + +
Sbjct: 254 GTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGL 313
Query: 291 VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
V PD TF+ + ACSH G VDEG + F+ M Y ++P V+HYGC+VDLLGR+G +EEA
Sbjct: 314 V-PDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEA 372
Query: 351 YILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYAST 410
IK MP++ NA +WRS L + +THG+ + E KHLL LE +S +YVLL+N+YA
Sbjct: 373 EECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGV 432
Query: 411 GQWNEMSKERRSMQERGVKKPEPGNS 436
+W ++ K R M++ V K PG S
Sbjct: 433 NRWTDVEKTRELMKDHRVNK-SPGIS 457
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 111/237 (46%), Gaps = 21/237 (8%)
Query: 89 PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQL 148
P T L ++ S+ KQ+H + +G+ +H + + L+H+ + + A +
Sbjct: 4 PSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSI 62
Query: 149 FEEMLNKDLVAWNSIIDCLVCCGKYNE---ALDFFTRMVQSG---MRPDDATFVVTLSAC 202
++ N + +N++I +V + A + +++ S +RP++ T+ A
Sbjct: 63 LRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKAS 122
Query: 203 GAMGAL-AFGRWVHSCIQRATYLGEITS---VSNSLVDMYAKCGAVEEAYEIFRSMKGKN 258
G GR +H+ + + +L + V +LV YA CG + EA +F ++ +
Sbjct: 123 GFDAQWHRHGRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPD 180
Query: 259 VISWNTMILGLASH---GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSH-GGFV 311
+ +WNT++ A+ + E L LF M VRP+ ++ + ++ +C++ G FV
Sbjct: 181 LATWNTLLAAYANSEEIDSDEEVLLLFMRM----QVRPNELSLVALIKSCANLGEFV 233
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 230/406 (56%), Gaps = 8/406 (1%)
Query: 34 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
V AGD+ A VFD + WN MI G E+ + ++ M PD +T
Sbjct: 36 VRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHG--LGFSPDEYT 93
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
+ GL SV +G+Q+H T+K G+E V +SL HMY ++ + M
Sbjct: 94 LGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP 153
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
++LVAWN++I G L + M SG RP+ TFV LS+C + G+
Sbjct: 154 VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 213
Query: 214 VHSCIQRATYLGEITSVSNS--LVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLAS 271
+H+ A +G + V+ L+ MY+KCG + +A + F + ++ + W++MI
Sbjct: 214 IHA---EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 272 HGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTV 331
HG G EA+ LF M ++ + + + FL +L ACSH G D+G FD+M Y +P +
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
KHY C+VDLLGRAG +++A +I++MP++ + ++W++LL+AC H N ++A++V K +L+
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Query: 392 LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSF 437
++P S+ YVLLAN++AS +W ++S+ R+SM+++ VKK E G S+
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKK-EAGISW 435
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
N LI+ Y D+ A ++F+EM ++ L WN++I L+ E L F M G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAKCGAVEEAY 248
PD+ T S + +++ G+ +H I+ L + V++SL MY + G +++
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLV--VNSSLAHMYMRNGKLQDGE 146
Query: 249 EIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
+ RSM +N+++WNT+I+G A +G L L+ +M++ + RP+ ITF+ VL +CS
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDL 205
Query: 309 GFVDEGRR 316
+G++
Sbjct: 206 AIRGQGQQ 213
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 231 SNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
SN L++ Y + G + A ++F M + + +WN MI GL E L+LF EM
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG- 86
Query: 291 VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
PD T V + V G++ + Y ++ + + + R G +++
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK-YGLELDLVVNSSLAHMYMRNGKLQDG 145
Query: 351 YILIKNMPMECNAIVWRSLLAACRTHG 377
I+I++MP+ N + W +L+ +G
Sbjct: 146 EIVIRSMPVR-NLVAWNTLIMGNAQNG 171
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 237/435 (54%), Gaps = 8/435 (1%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
+IH + GF + + VG +V + G +N A VF R+ WN MI GF
Sbjct: 128 QIHGFCLKIGF-EMMVEVGNSLV--DMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE-- 123
+ KA+ + MQ+ PD FT + LLK G + GKQ+H ++ G
Sbjct: 185 HAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+ A + SL+ +Y + +A + F+++ K +++W+S+I G++ EA+ F R+
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
+ + D + L G+ + + + G TSV NS+VDMY KCG
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPS-GLETSVLNSVVDMYLKCGL 363
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
V+EA + F M+ K+VISW +I G HG G +++ +F EML+ N+ PD + +L VL
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI-EPDEVCYLAVLS 422
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
ACSH G + EG F + + ++P V+HY C+VDLLGRAG ++EA LI MP++ N
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
+W++LL+ CR HG+++L ++V K LL ++ + ++YV+++N+Y G WNE R
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 542
Query: 424 QERGVKKPEPGNSFV 438
+G+KK E G S+V
Sbjct: 543 NIKGLKK-EAGMSWV 556
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 196/396 (49%), Gaps = 17/396 (4%)
Query: 6 EIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++H + ++G N + +I ++C P A VFD + + + W+ ++ G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPL----MAYKVFDSMPERNVVSWSALMSGH 82
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ ++ + M G + P+ FTFS LK G L ++ G Q+H LK+G E
Sbjct: 83 VLNGDLKGSLSLFSEM--GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEM 140
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V NSL+ MY I A ++F ++++ L++WN++I V G ++ALD F M
Sbjct: 141 MVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200
Query: 185 QSGM--RPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY-LGEITSVSNSLVDMYAKC 241
++ + RPD+ T L AC + G + G+ +H + R+ + +++ SLVD+Y KC
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G + A + F +K K +ISW+++ILG A G EA+ LF + LQE + D +
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF-KRLQELNSQIDSFALSSI 319
Query: 302 LCACSHGGFVDEGRRYFDIMSR-DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
+ + + +G++ + + ++ +V +VD+ + GLV+EA M ++
Sbjct: 320 IGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQLK 377
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLE--LEP 394
+ I W ++ HG K + ++ +L +EP
Sbjct: 378 -DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP 412
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 164/328 (50%), Gaps = 15/328 (4%)
Query: 110 GKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVC 169
G Q+HC LK G + N LI MY ++ A+++F+ M +++V+W++++ V
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 170 CGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEIT 228
G +L F+ M + G+ P++ TF L ACG + AL G +H C++ + +
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEM--MV 142
Query: 229 SVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQE 288
V NSLVDMY+KCG + EA ++FR + +++ISWN MI G G G++AL F M +
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 289 NVV-RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRD-YNVQPTVKHYGCMVDLLGRAGL 346
N+ RPD T +L ACS G + G++ + R ++ + G +VDL + G
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 347 V---EEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLL 403
+ +A+ IK M I W SL+ G A + K L EL D L
Sbjct: 263 LFSARKAFDQIKEKTM----ISWSSLILGYAQEGEFVEAMGLFKRLQELNS--QIDSFAL 316
Query: 404 ANMYASTGQWNEMSKERRSMQERGVKKP 431
+++ + + ++ + MQ VK P
Sbjct: 317 SSIIGVFADF-ALLRQGKQMQALAVKLP 343
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 230/412 (55%), Gaps = 13/412 (3%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGF-GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
G ++ + VF + + D WNTMI F N E +L Y+ +QG D T +
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG---FKIDYITVT 423
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE--ML 153
LL L + +GKQ H ++ G++ + + LI MY I + +LFE
Sbjct: 424 ALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYA 482
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
+D WNS+I G + F +M++ +RP+ T L AC +G++ G+
Sbjct: 483 ERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQ 542
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG 273
+H R YL + V+++LVDMY+K GA++ A ++F K +N +++ TMILG HG
Sbjct: 543 LHGFSIR-QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHG 601
Query: 274 NGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKH 333
G A++LF M QE+ ++PD ITF+ VL ACS+ G +DEG + F+ M YN+QP+ +H
Sbjct: 602 MGERAISLFLSM-QESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEH 660
Query: 334 YGCMVDLLGRAGLVEEAYILIKNMPMECN-AIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
Y C+ D+LGR G V EAY +K + E N A +W SLL +C+ HG ++LAE V + L +
Sbjct: 661 YCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKF 720
Query: 393 EPCHS-SDY-VLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
+ + S Y VLL+NMYA +W + K RR M+E+G+KK E G S + + G
Sbjct: 721 DKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKK-EVGRSGIEIAG 771
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 11/349 (3%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G+ A +FD + KP LWNT+I GF N P +A+LFY RM++ P D +T+S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMK------DIETAHQLFE 150
LK ++ GK +HC ++ + V NSL++MY + + ++F+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 151 EMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAF 210
M K++VAWN++I V G+ EA F M++ ++P +FV A ++
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 211 GRWVHSCIQR--ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
+ + + Y+ ++ VS S + MYA+ G +E + +F S +N+ WNTMI
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVS-SAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGV 291
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
+ E++ LF E + + D +T+L A S V+ GR++ +S+++
Sbjct: 292 YVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFREL 351
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
P V MV + R G V +++ + +M E + + W ++++A +G
Sbjct: 352 PIVIVNSLMV-MYSRCGSVHKSFGVFLSM-RERDVVSWNTMISAFVQNG 398
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 211/471 (44%), Gaps = 52/471 (11%)
Query: 27 IVFCAVSVPA--GDMNYAVSVFDRVDKPDAFLWNTMIRGF-GNTNQPEKAVLFYKRMQQG 83
+V A+S+ A GD+ + VFD + + +WNTMI + N E LF + + G
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI--G 310
Query: 84 EPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIE 143
+V D T+ V L V LG+Q H K E + NSL+ MY +
Sbjct: 311 SKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370
Query: 144 TAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACG 203
+ +F M +D+V+WN++I V G +E L M + G + D T LSA
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS 430
Query: 204 AMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFR--SMKGKNVIS 261
+ G+ H+ + R + +++ L+DMY+K G + + ++F ++ +
Sbjct: 431 NLRNKEIGKQTHAFLIRQGI--QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQAT 488
Query: 262 WNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIM 321
WN+MI G +G+ + +F +ML++N +RP+ +T +L ACS G VD G++
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQN-IRPNAVTVASILPACSQIGSVDLGKQLHGFS 547
Query: 322 SRDYNVQPTVKHYGCMVDLLGRAGLVEEA------------------------------- 350
R Y + V +VD+ +AG ++ A
Sbjct: 548 IRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERA 606
Query: 351 ---YILIKNMPMECNAIVWRSLLAACRTHG----NVKLAEKVRKHLLELEPCHSSDYVLL 403
++ ++ ++ +AI + ++L+AC G +K+ E++R+ + ++P S Y +
Sbjct: 607 ISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE-VYNIQPS-SEHYCCI 664
Query: 404 ANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLENETAERLS 454
+M G+ NE + + + E G E S +G + E E AE +S
Sbjct: 665 TDMLGRVGRVNEAYEFVKGLGEEG-NIAELWGSLLGSCKLHGELELAETVS 714
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 173/357 (48%), Gaps = 22/357 (6%)
Query: 45 VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL 104
VFD + + + WNT+I + T + +A + M + E V P +F + V
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME--VKPSPVSFVNVFPAVSIS 227
Query: 105 GSVVLGKQLHCSTLKLGVE--NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNS 162
S+ + LKLG E V +S I MY + DIE++ ++F+ + +++ WN+
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 163 II------DCLVCCGKYNEALDFFTRMVQSG-MRPDDATFVVTLSACGAMGALAFGRWVH 215
+I DCLV E+++ F + S + D+ T+++ SA A+ + GR H
Sbjct: 288 MIGVYVQNDCLV------ESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH 341
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
+ + I V NSL+ MY++CG+V +++ +F SM+ ++V+SWNTMI +G
Sbjct: 342 GFVSKNFRELPIVIV-NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLD 400
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
E L L EM Q+ + D IT +L A S+ + G++ + R + Y
Sbjct: 401 DEGLMLVYEM-QKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY- 458
Query: 336 CMVDLLGRAGLVEEAYILIKNMP-MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
++D+ ++GL+ + L + E + W S+++ +G+ + V + +LE
Sbjct: 459 -LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/448 (32%), Positives = 235/448 (52%), Gaps = 19/448 (4%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVF---CAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
K IHA +G+ + V K+I C SV VFD + + +I
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR------GVFDGMSHRNVITLTAVI 228
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
G E + + M++G H P++ T+ L G +V G+Q+H K G
Sbjct: 229 SGLIENELHEDGLRLFSLMRRGLVH--PNSVTYLSALAACSGSQRIVEGQQIHALLWKYG 286
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+E+ + ++L+ MY IE A +FE D V+ I+ L G EA+ FF
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
RM+Q+G+ D L +L G+ +HS + + + G T V+N L++MY+KC
Sbjct: 347 RMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN-TFVNNGLINMYSKC 405
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G + ++ +FR M +N +SWN+MI A HG+G AL L+ EM V +P +TFL +
Sbjct: 406 GDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEV-KPTDVTFLSL 464
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
L ACSH G +D+GR + M + ++P +HY C++D+LGRAGL++EA I ++P++
Sbjct: 465 LHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKP 524
Query: 362 NAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERR 421
+ +W++LL AC HG+ ++ E + L + P SS ++L+AN+Y+S G+W E +K +
Sbjct: 525 DCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIK 584
Query: 422 SMQERGVKKPEPGNSFVGLPGIRLENET 449
M+ GV K G+ I +E++T
Sbjct: 585 RMKAMGVTKE------TGISSIEIEHKT 606
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 182/393 (46%), Gaps = 10/393 (2%)
Query: 16 FHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVL 75
H+N LVV ++ ++ G + A+ +FD + D N + GF + E +
Sbjct: 85 IHRNALVVWNSLL--SLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFV 142
Query: 76 FYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHM 135
KRM D T + +L + ++ K +H + G + V N LI
Sbjct: 143 LLKRMLGSGGF---DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITS 199
Query: 136 YGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATF 195
Y + +F+ M +++++ ++I L+ + + L F+ M + + P+ T+
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY 259
Query: 196 VVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMK 255
+ L+AC + G+ +H+ + + E+ + ++L+DMY+KCG++E+A+ IF S
Sbjct: 260 LSALAACSGSQRIVEGQQIHALLWKYGIESELC-IESALMDMYSKCGSIEDAWTIFESTT 318
Query: 256 GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGR 315
+ +S +++GLA +G+ EA+ F MLQ V D VL + G+
Sbjct: 319 EVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG-VEIDANVVSAVLGVSFIDNSLGLGK 377
Query: 316 RYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRT 375
+ ++ + T + G ++++ + G + ++ + + MP N + W S++AA
Sbjct: 378 QLHSLVIKRKFSGNTFVNNG-LINMYSKCGDLTDSQTVFRRMPKR-NYVSWNSMIAAFAR 435
Query: 376 HGNVKLAEKVRKHLLELEPCHSSDYVLLANMYA 408
HG+ A K+ + + LE +D L+ ++A
Sbjct: 436 HGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHA 467
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 95 SFLLKIVGGLGSVV-LGKQLHCSTLK-----LGVENHAH-----VRNSLIHMYGVMKDIE 143
S LL I G G LG LH S +K V+ H V NSL+ +Y +
Sbjct: 48 SLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLV 107
Query: 144 TAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACG 203
A +LF+EM +D+++ N + + + RM+ SG D AT + LS C
Sbjct: 108 DAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-DHATLTIVLSVCD 166
Query: 204 AMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWN 263
+ +H+ + Y EI SV N L+ Y KCG +F M +NVI+
Sbjct: 167 TPEFCLVTKMIHALAILSGYDKEI-SVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLT 225
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
+I GL + + L LF+ +++ +V P+ +T+L L ACS + EG++ ++ +
Sbjct: 226 AVISGLIENELHEDGLRLFS-LMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK 284
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
Y ++ + ++D+ + G +E+A+ + ++
Sbjct: 285 -YGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 251/474 (52%), Gaps = 44/474 (9%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++H + G + V ++ + G + VFD + + D WN +I +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLM---GMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ E A+ +KRM Q E ++ D T L L ++ +G++++ + E
Sbjct: 123 VGNGRFEDAIGVFKRMSQ-ESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEM 180
Query: 125 HAHVRNSLIHMY-------------GVMKD------------------IETAHQLFEEML 153
+ N+L+ M+ M+D I+ A LFE
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
KD+V W ++++ V +++EAL+ F M +G+RPD+ V L+ C GAL G+W
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG 273
+H I + V +LVDMYAKCG +E A E+F +K ++ SW ++I GLA +G
Sbjct: 301 IHGYINENRVTVD-KVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNG 359
Query: 274 NGTEALTLFAEMLQENV-VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
AL L+ EM ENV VR D ITF+ VL AC+HGGFV EGR+ F M+ +NVQP +
Sbjct: 360 MSGRALDLYYEM--ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSE 417
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAI---VWRSLLAACRTHGNVKLAEKVRKHL 389
H C++DLL RAGL++EA LI M E + V+ SLL+A R +GNVK+AE+V + L
Sbjct: 418 HCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKL 477
Query: 390 LELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGI 443
++E SS + LLA++YAS +W +++ RR M++ G++K PG S + + G+
Sbjct: 478 EKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKF-PGCSSIEIDGV 530
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 172/358 (48%), Gaps = 39/358 (10%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
P ++N M++ + K + + ++ QG + PD FT +LK +G L V+ G
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQG---LYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCC 170
+++H +K G+E ++V NSL+ MY + IE H++F+EM +D+V+WN +I V
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 171 GKYNEALDFFTRMVQ-SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS 229
G++ +A+ F RM Q S ++ D+ T V TLSAC A+ L G ++ + T
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV--VTEFEMSVR 183
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
+ N+LVDM+ KCG +++A +F SM+ KNV W +M+ G S G EA LF ++
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 290 VV------------------------------RPDGITFLGVLCACSHGGFVDEGRRYFD 319
VV RPD + +L C+ G +++G+
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 320 IMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
++ + V +VD+ + G +E A + + E + W SL+ +G
Sbjct: 304 YINENRVTVDKVVGTA-LVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNG 359
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 133/276 (48%), Gaps = 13/276 (4%)
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
L+ +N ++ L + + L F + G+ PD+ T V L + G + + G VH
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
+A L + VSNSL+ MYA G +E +++F M ++V+SWN +I +G
Sbjct: 71 YAVKAG-LEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
+A+ +F M QE+ ++ D T + L ACS ++ G R + + ++ + +V+
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNA 187
Query: 337 MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCH 396
+VD+ + G +++A + +M + N W S++ + G + A + L E P
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRIDEA----RVLFERSPV- 241
Query: 397 SSDYVL---LANMYASTGQWNEMSKERRSMQERGVK 429
D VL + N Y +++E + R MQ G++
Sbjct: 242 -KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 240/488 (49%), Gaps = 77/488 (15%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+ H ++ Q G +N VV +++ AG M A ++F + + WN MI+GF
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYP---KAGRMGDAYNLFVEMPVRNRMSWNVMIKGF 234
Query: 65 GNTNQPEKAVLFYKRMQQGE--PHVVP---------------DTFTFSFLLKIVGG---- 103
E AV ++ MQ+ E P V D + L+++ G
Sbjct: 235 SQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSG 294
Query: 104 ------------LGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE 151
L ++ + +++H +K G E + RN+LIH+YG ++ A LF +
Sbjct: 295 EALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ 354
Query: 152 MLNKDLVAWNSIIDCLVCCGKYNEAL---------------------------------- 177
+ NK + +WNS+I V GK +EAL
Sbjct: 355 IRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR 414
Query: 178 -----DFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSN 232
++F +M S + + T LS C + AL GR +H + R T + E V N
Sbjct: 415 GDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIR-TSMSENILVQN 473
Query: 233 SLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
+LV+MYAKCG + E +F +++ K++ISWN++I G HG +AL++F M+
Sbjct: 474 ALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGF-H 532
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYI 352
PDGI + VL ACSH G V++GR F MS+ + ++P +HY C+VDLLGR G ++EA
Sbjct: 533 PDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASE 592
Query: 353 LIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQ 412
++KNMPME V +LL +CR H NV +AE + L LEP + Y+LL+N+Y++ G+
Sbjct: 593 IVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGR 652
Query: 413 WNEMSKER 420
W E + R
Sbjct: 653 WEESANVR 660
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 159/360 (44%), Gaps = 50/360 (13%)
Query: 5 KEIHARIYQTGF--HQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK---PDAFLWNT 59
+++HA++ + F L I V+ + G + A +VF+ V D LWN+
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARL----GLLLDARNVFETVSLVLLSDLRLWNS 128
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+++ + E A+ Y+ M+Q + D + +L+ LG L + H ++
Sbjct: 129 ILKANVSHGLYENALELYRGMRQ--RGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ 186
Query: 120 LGVENHAHVRNSLIHMY------------------------GVM-------KDIETAHQL 148
+G++ + HV N L+ +Y VM D E+A ++
Sbjct: 187 IGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKI 246
Query: 149 FE----EMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGA 204
FE E D V W S++ C CGK+ + L +F M SG V S C
Sbjct: 247 FEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAE 306
Query: 205 MGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNT 264
+ AL+ VH + + + E N+L+ +Y K G V++A +FR ++ K + SWN+
Sbjct: 307 LEALSIAEKVHGYVIKGGF-EEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 265 MILGLASHGNGTEALTLFAEMLQEN---VVRPDGITFLGVLCACSHGGFVDEGRRYFDIM 321
+I G EAL+LF+E+ + N V+ + +T+ V+ C+ G D+ YF M
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 220/417 (52%), Gaps = 40/417 (9%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
WN ++ GF + ++AV+ ++++ PD T S +L VG + +G+ +H
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHH--LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 117 TLKLGVENHAHVRNSLIHMYG-----------------------------------VMKD 141
+K G+ V +++I MYG V K
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 142 IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA 201
+E E+ + ++V+W SII GK EAL+ F M +G++P+ T L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 202 CGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVIS 261
CG + AL GR H R L + V ++L+DMYAKCG + + +F M KN++
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNV-HVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 262 WNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIM 321
WN+++ G + HG E +++F E L ++PD I+F +L AC G DEG +YF +M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIF-ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 322 SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKL 381
S +Y ++P ++HY CMV+LLGRAG ++EAY LIK MP E ++ VW +LL +CR NV L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 382 AEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
AE + L LEP + YVLL+N+YA+ G W E+ R M+ G+KK PG S++
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK-NPGCSWI 631
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 198/481 (41%), Gaps = 89/481 (18%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
+ HARI ++G + + K+I A N A V + P + ++++I
Sbjct: 36 QAHARILKSGAQNDGYISAKLI---ASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 66 NTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+++ + RM G ++PD+ L K+ L + +GKQ+HC + G++
Sbjct: 93 KAKLFTQSIGVFSRMFSHG---LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD---------------------------- 156
A V+ S+ HMY + A ++F+ M +KD
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 157 -------LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA 209
+V+WN I+ G + EA+ F ++ G PD T L + G L
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 210 FGRWVHSCIQRATYLGEITSVSNSLVDMYAKC---------------------------- 241
GR +H + + L + +S +++DMY K
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVIS-AMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 242 ---GAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
G V++A E+F K + NV+SW ++I G A +G EAL LF EM Q V+P+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPN 387
Query: 295 GITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG-CMVDLLGRAGLVEEAYIL 353
+T +L AC + + GR R + + H G ++D+ + G + + I+
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIV 445
Query: 354 IKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL--ELEPCHSSDYVLLANMYASTG 411
MP + N + W SL+ HG K + + L+ L+P D++ ++ ++ G
Sbjct: 446 FNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP----DFISFTSLLSACG 500
Query: 412 Q 412
Q
Sbjct: 501 Q 501
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 236/439 (53%), Gaps = 16/439 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K +H + GF N LVV I+ V + + YA VFD K + W+ MI G+
Sbjct: 225 KAVHGYCTRMGF-SNDLVVKTGIL--DVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGY 281
Query: 65 GNTNQPEKA--VLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
++A V F + V P +L G + G+ +HC +K G
Sbjct: 282 VENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIID-CLVCCGKYNEALDFFT 181
V+N++I Y + A + F E+ KD++++NS+I C+V C + E+ F
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNC-RPEESFRLFH 398
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAK 240
M SG+RPD T + L+AC + AL G H C+ + TS+ N+L+DMY K
Sbjct: 399 EMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVN--TSICNALMDMYTK 456
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG ++ A +F +M ++++SWNTM+ G HG G EAL+LF M QE V PD +T L
Sbjct: 457 CGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM-QETGVNPDEVTLLA 515
Query: 301 VLCACSHGGFVDEGRRYFDIMSR-DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
+L ACSH G VDEG++ F+ MSR D+NV P + HY CM DLL RAG ++EAY + MP
Sbjct: 516 ILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPF 575
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKE 419
E + V +LL+AC T+ N +L +V K + L S VLL+N Y++ +W + ++
Sbjct: 576 EPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARI 634
Query: 420 RRSMQERGVKKPEPGNSFV 438
R ++RG+ K PG S+V
Sbjct: 635 RMIQKKRGLLKT-PGYSWV 652
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 181/380 (47%), Gaps = 20/380 (5%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K IH+ + + F + V ++ F A G++ A+ VFD + K D WN MI GF
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYA---KCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ + M++ + + P+ T + +G G++ GK +H ++G N
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDG-LSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V+ ++ +Y K I A ++F+ K+ V W+++I V EA + F +M+
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 185 QSGMRPDDATFV------VTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
+ D+ V + L C G L+ GR VH +A ++ ++T V N+++ Y
Sbjct: 299 VN----DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT-VQNTIISFY 353
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
AK G++ +A+ F + K+VIS+N++I G + E+ LF EM + + +RPD T
Sbjct: 354 AKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM-RTSGIRPDITTL 412
Query: 299 LGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
LGVL ACSH + G + + Y V ++ + ++D+ + G ++ A + M
Sbjct: 413 LGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTM 470
Query: 358 PMECNAIVWRSLLAACRTHG 377
+ + W ++L HG
Sbjct: 471 HKR-DIVSWNTMLFGFGIHG 489
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 139/285 (48%), Gaps = 13/285 (4%)
Query: 38 DMNYAVSVFDRVDKP--DAFLWNTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTF 94
++ A VFD + P + W+ MIR + + + EKA+ L+YK + G V P +T+
Sbjct: 50 EVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG---VRPTKYTY 106
Query: 95 SFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN 154
F+LK GL ++ GK +H +V +L+ Y ++E A ++F+EM
Sbjct: 107 PFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPK 166
Query: 155 KDLVAWNSIID--CLVCCGKYNEALDFFTRMVQ-SGMRPDDATFVVTLSACGAMGALAFG 211
+D+VAWN++I L CC + + F M + G+ P+ +T V A G GAL G
Sbjct: 167 RDMVAWNAMISGFSLHCC--LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 212 RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLAS 271
+ VH R + ++ V ++D+YAK + A +F KN ++W+ MI G
Sbjct: 225 KAVHGYCTRMGFSNDLV-VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 272 HGNGTEALTLFAEML-QENVVRPDGITFLGVLCACSHGGFVDEGR 315
+ EA +F +ML +NV + +L C+ G + GR
Sbjct: 284 NEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 117/213 (54%), Gaps = 4/213 (1%)
Query: 106 SVVLGKQLHCSTLKLGVE-NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDL--VAWNS 162
++VLG+ +H LK + + + V +L +Y ++E A +F+E+ + + +AW+
Sbjct: 14 NLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDL 73
Query: 163 IIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRAT 222
+I +ALD + +M+ SG+RP T+ L AC + A+ G+ +HS + +
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 223 YLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLF 282
+ ++ V +LVD YAKCG +E A ++F M +++++WN MI G + H T+ + LF
Sbjct: 134 FATDMY-VCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLF 192
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGR 315
+M + + + P+ T +G+ A G + EG+
Sbjct: 193 LDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 195 FVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM 254
F+ L C L G+ +H + + + ++V +L +YA C VE A +F +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 255 KGK--NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVD 312
N I+W+ MI AS+ +AL L+ +ML VRP T+ VL AC+ +D
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG-VRPTKYTYPFVLKACAGLRAID 120
Query: 313 EGRRYFDIMSRDYNVQPTVKHYGC--MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLL 370
+G+ I S Y C +VD + G +E A + MP + + W +++
Sbjct: 121 DGKL---IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKR-DMVAWNAMI 176
Query: 371 AACRTH 376
+ H
Sbjct: 177 SGFSLH 182
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 155/476 (32%), Positives = 246/476 (51%), Gaps = 51/476 (10%)
Query: 5 KEIHARIYQTGFHQ--NHLVVGKIIVFCAVSVPAGDMNYAVSVFDRV--DKPDAFLWNTM 60
KE+HA + +G + + + F A S G+M A +FD + + D W T+
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASS---GEMVTAQKLFDEIPLSEKDNVDWTTL 82
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
+ F ++ + M++ + D + L + L + +Q H +K+
Sbjct: 83 LSSFSRYGLLVNSMKLFVEMRRKRVEI--DDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM 140
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLV------------ 168
GV V N+L+ MYG + ++FEE+ K +V+W ++D +V
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 169 -------------------CCGKYNEALDFFTRMV-QSGMRPDDATFVVTLSACGAMGAL 208
G E L+ MV + G + T LSAC G L
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNL 260
Query: 209 AFGRWVHS-CIQRATYLGEITS-----VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISW 262
GRWVH +++ +GE S V +LVDMYAKCG ++ + +FR M+ +NV++W
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTW 320
Query: 263 NTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMS 322
N + GLA HG G + +F +M++E V+PD +TF VL ACSH G VDEG R F +
Sbjct: 321 NALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL- 377
Query: 323 RDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
R Y ++P V HY CMVDLLGRAGL+EEA IL++ MP+ N +V SLL +C HG V++A
Sbjct: 378 RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIA 437
Query: 383 EKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
E++++ L+++ P ++ +L++NMY + G+ + R S+++RG++K PG S +
Sbjct: 438 ERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKI-PGLSSI 492
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 139/337 (41%), Gaps = 62/337 (18%)
Query: 110 GKQLHCSTLKLGVEN--HAHVRNSLIHMYGVMKDIETAHQLFEE--MLNKDLVAWNSIID 165
GK+LH G++ +++ N+L Y ++ TA +LF+E + KD V W +++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 166 CLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLG 225
G ++ F M + + DD + V C + L F + H A +G
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGV---AVKMG 141
Query: 226 EITSVS--NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
+TSV N+L+DMY KCG V E IF ++ K+V+SW ++
Sbjct: 142 VLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVL----------------- 184
Query: 284 EMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
+ VV+ +G+ + GR F M V TV G LG
Sbjct: 185 ----DTVVKWEGL---------------ERGREVFHEMPERNAVAWTVMVAG----YLG- 220
Query: 344 AGLVEEAYILIKNMPMEC----NAIVWRSLLAACRTHGNVKLAEKV-----RKHLLELEP 394
AG E L+ M C N + S+L+AC GN+ + V +K ++ E
Sbjct: 221 AGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEE 280
Query: 395 CHSSDYVL---LANMYASTGQWNEMSKERRSMQERGV 428
D ++ L +MYA G + R M++R V
Sbjct: 281 ASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNV 317
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 235/427 (55%), Gaps = 8/427 (1%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+H + +G N ++G +V ++ G+M+ + V ++ + D WN +I G+
Sbjct: 367 LHGLVVVSGLFYNQ-IIGNALV--SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 423
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVV-LGKQLHCSTLKLGVENH 125
P+KA+ ++ M+ V + T +L G ++ GK LH + G E+
Sbjct: 424 DEDPDKALAAFQTMRV--EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
HV+NSLI MY D+ ++ LF + N++++ WN+++ G E L ++M
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
G+ D +F LSA + L G+ +H + + + + + N+ DMY+KCG +
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD-SFIFNAAADMYSKCGEIG 600
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
E ++ +++ SWN +I L HG E F EML E ++P +TF+ +L AC
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML-EMGIKPGHVTFVSLLTAC 659
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
SHGG VD+G Y+D+++RD+ ++P ++H C++DLLGR+G + EA I MPM+ N +V
Sbjct: 660 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 719
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
WRSLLA+C+ HGN+ K ++L +LEP S YVL +NM+A+TG+W ++ R+ M
Sbjct: 720 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 779
Query: 426 RGVKKPE 432
+ +KK +
Sbjct: 780 KNIKKKQ 786
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 193/397 (48%), Gaps = 20/397 (5%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++I ++ ++G V +I G+++YA +FD++ + D WN++ +
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLG---SMGNVDYANYIFDQMSERDTISWNSIAAAY 219
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
E++ + M++ V ++ T S LL ++G + G+ +H +K+G ++
Sbjct: 220 AQNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 277
Query: 125 HAHVRNSLIHMY-GVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
V N+L+ MY G + +E A+ +F++M KDL++WNS++ V G+ +AL M
Sbjct: 278 VVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 336
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAKCG 242
+ SG + TF L+AC GR +H + + +I + N+LV MY K G
Sbjct: 337 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI--IGNALVSMYGKIG 394
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ E+ + M ++V++WN +I G A + +AL F M E V + IT + VL
Sbjct: 395 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-VSSNYITVVSVL 453
Query: 303 CAC-SHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
AC G ++ G+ + I+S + VK+ ++ + + G + + L +
Sbjct: 454 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLDNR 511
Query: 361 CNAIVWRSLLAACRTHGN----VKLAEKVRKHLLELE 393
N I W ++LAA HG+ +KL K+R + L+
Sbjct: 512 -NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 547
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 175/369 (47%), Gaps = 13/369 (3%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++H + ++G + V I+ V G ++ + VF+ + + W +++ G+
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGV---YGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+ +PE+ + YK M+ GE V + + S ++ G L LG+Q+ +K G+E+
Sbjct: 120 DKGEPEEVIDIYKGMR-GEG-VGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
V NSLI M G M +++ A+ +F++M +D ++WNSI G E+ F+ M +
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
+ T LS G + +GR +H + + + + V N+L+ MYA G
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF-DSVVCVCNTLLRMYAGAGRSV 296
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
EA +F+ M K++ISWN+++ + G +AL L M+ + +TF L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAAC 355
Query: 306 SHGGFVDEGR--RYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
F ++GR ++S + Q +V + G+ G + E+ ++ MP +
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGN---ALVSMYGKIGEMSESRRVLLQMPRR-DV 411
Query: 364 IVWRSLLAA 372
+ W +L+
Sbjct: 412 VAWNALIGG 420
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 157/324 (48%), Gaps = 11/324 (3%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVL-GKQLHC 115
WNTM+ G + + F+++M + + P +F + L+ G GS+ G Q+H
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKM--CDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 116 STLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE 175
K G+ + +V +++H+YGV + + ++FEEM ++++V+W S++ G+ E
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 176 ALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
+D + M G+ ++ + + +S+CG + + GR + + ++ ++ +V NSL+
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL-AVENSLI 185
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEM--LQENVVRP 293
M G V+ A IF M ++ ISWN++ A +G+ E+ +F+ M + V
Sbjct: 186 SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST 245
Query: 294 DGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYIL 353
T L VL H + GR ++ + V ++ + AG EA ++
Sbjct: 246 TVSTLLSVLGHVDHQKW---GRGIHGLVVK-MGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 354 IKNMPMECNAIVWRSLLAACRTHG 377
K MP + + I W SL+A+ G
Sbjct: 302 FKQMPTK-DLISWNSLMASFVNDG 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 116/229 (50%), Gaps = 9/229 (3%)
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL-AFGRW 213
++ V+WN+++ +V G Y E ++FF +M G++P ++ACG G++ G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG 273
VH + ++ L ++ VS +++ +Y G V + ++F M +NV+SW ++++G + G
Sbjct: 64 VHGFVAKSGLLSDVY-VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 274 NGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDE--GRRYFDIMSRDYNVQPTV 331
E + ++ M E V + L V+ +C G DE GR+ + + ++ +
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSL-VISSC--GLLKDESLGRQIIGQVVKS-GLESKL 178
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVK 380
++ +LG G V+ A + M E + I W S+ AA +G+++
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE 226
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 235/427 (55%), Gaps = 8/427 (1%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+H + +G N ++G +V ++ G+M+ + V ++ + D WN +I G+
Sbjct: 384 LHGLVVVSGLFYNQ-IIGNALV--SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 440
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVV-LGKQLHCSTLKLGVENH 125
P+KA+ ++ M+ V + T +L G ++ GK LH + G E+
Sbjct: 441 DEDPDKALAAFQTMRV--EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
HV+NSLI MY D+ ++ LF + N++++ WN+++ G E L ++M
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
G+ D +F LSA + L G+ +H + + + + + N+ DMY+KCG +
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD-SFIFNAAADMYSKCGEIG 617
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
E ++ +++ SWN +I L HG E F EML E ++P +TF+ +L AC
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML-EMGIKPGHVTFVSLLTAC 676
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
SHGG VD+G Y+D+++RD+ ++P ++H C++DLLGR+G + EA I MPM+ N +V
Sbjct: 677 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 736
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
WRSLLA+C+ HGN+ K ++L +LEP S YVL +NM+A+TG+W ++ R+ M
Sbjct: 737 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 796
Query: 426 RGVKKPE 432
+ +KK +
Sbjct: 797 KNIKKKQ 803
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 193/397 (48%), Gaps = 20/397 (5%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++I ++ ++G V +I G+++YA +FD++ + D WN++ +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLG---SMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
E++ + M++ V ++ T S LL ++G + G+ +H +K+G ++
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294
Query: 125 HAHVRNSLIHMY-GVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
V N+L+ MY G + +E A+ +F++M KDL++WNS++ V G+ +AL M
Sbjct: 295 VVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 353
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAKCG 242
+ SG + TF L+AC GR +H + + +I + N+LV MY K G
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI--IGNALVSMYGKIG 411
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ E+ + M ++V++WN +I G A + +AL F M E V + IT + VL
Sbjct: 412 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-VSSNYITVVSVL 470
Query: 303 CAC-SHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
AC G ++ G+ + I+S + VK+ ++ + + G + + L +
Sbjct: 471 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLDNR 528
Query: 361 CNAIVWRSLLAACRTHGN----VKLAEKVRKHLLELE 393
N I W ++LAA HG+ +KL K+R + L+
Sbjct: 529 -NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 564
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 174/370 (47%), Gaps = 15/370 (4%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++H + ++G + V I+ V G ++ + VF+ + + W +++ G+
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGV---YGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 136
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+ +PE+ + YK M+ GE V + + S ++ G L LG+Q+ +K G+E+
Sbjct: 137 DKGEPEEVIDIYKGMR-GEG-VGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 194
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
V NSLI M G M +++ A+ +F++M +D ++WNSI G E+ F+ M +
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
+ T LS G + +GR +H + + + + V N+L+ MYA G
Sbjct: 255 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF-DSVVCVCNTLLRMYAGAGRSV 313
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
EA +F+ M K++ISWN+++ + G +AL L M+ + +TF L AC
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAAC 372
Query: 306 SHGGFVDEGRRYFDIMSRD---YNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
F ++GR ++ YN +V + G+ G + E+ ++ MP +
Sbjct: 373 FTPDFFEKGRILHGLVVVSGLFYNQIIG----NALVSMYGKIGEMSESRRVLLQMPRR-D 427
Query: 363 AIVWRSLLAA 372
+ W +L+
Sbjct: 428 VVAWNALIGG 437
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 165/344 (47%), Gaps = 11/344 (3%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G + A +FD + + WNTM+ G + + F+++M + + P +F +
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM--CDLGIKPSSFVIAS 63
Query: 97 LLKIVGGLGSVVL-GKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
L+ G GS+ G Q+H K G+ + +V +++H+YGV + + ++FEEM ++
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
++V+W S++ G+ E +D + M G+ ++ + + +S+CG + + GR +
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
+ ++ ++ +V NSL+ M G V+ A IF M ++ ISWN++ A +G+
Sbjct: 184 GQVVKSGLESKL-AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHI 242
Query: 276 TEALTLFAEM--LQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKH 333
E+ +F+ M + V T L VL H + GR ++ + V
Sbjct: 243 EESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW---GRGIHGLVVK-MGFDSVVCV 298
Query: 334 YGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
++ + AG EA ++ K MP + + I W SL+A+ G
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDG 341
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 125/249 (50%), Gaps = 9/249 (3%)
Query: 135 MYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDAT 194
MY ++ A LF+ M ++ V+WN+++ +V G Y E ++FF +M G++P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 195 FVVTLSACGAMGAL-AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRS 253
++ACG G++ G VH + ++ L ++ VS +++ +Y G V + ++F
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY-VSTAILHLYGVYGLVSCSRKVFEE 119
Query: 254 MKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDE 313
M +NV+SW ++++G + G E + ++ M E V + L V+ +C G DE
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL-VISSC--GLLKDE 176
Query: 314 --GRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
GR+ + + ++ + ++ +LG G V+ A + M E + I W S+ A
Sbjct: 177 SLGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAA 234
Query: 372 ACRTHGNVK 380
A +G+++
Sbjct: 235 AYAQNGHIE 243
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 218/410 (53%), Gaps = 10/410 (2%)
Query: 39 MNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLL 98
+N A +FD ++ W+ M+ G+ + +AV + RM + P +T +L
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA--GIKPSEYTIVGVL 329
Query: 99 KIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLV 158
+ + GKQLH LKLG E H +L+ MY + A + F+ + +D+
Sbjct: 330 NACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVA 389
Query: 159 AWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCI 218
W S+I V EAL + RM +G+ P+D T L AC ++ L G+ VH
Sbjct: 390 LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 219 QRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEA 278
+ + E+ + ++L MY+KCG++E+ +FR K+V+SWN MI GL+ +G G EA
Sbjct: 450 IKHGFGLEV-PIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508
Query: 279 LTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV 338
L LF EML E + PD +TF+ ++ ACSH GFV+ G YF++MS + P V HY CMV
Sbjct: 509 LELFEEMLAEGM-EPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567
Query: 339 DLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSS 398
DLL RAG ++EA I++ ++ +WR LL+AC+ HG +L + L+ L SS
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627
Query: 399 DYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLENE 448
YV L+ +Y + G+ ++ + + M+ GV K VG I L+N+
Sbjct: 628 TYVQLSGIYTALGRMRDVERVWKHMRANGVSKE------VGCSWIELKNQ 671
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 180/373 (48%), Gaps = 14/373 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+ +H +I +TG ++ F A G + A S+F+ + D WN++I G+
Sbjct: 34 RAVHGQIIRTGASTCIQHANVLVNFYA---KCGKLAKAHSIFNAIICKDVVSWNSLITGY 90
Query: 65 ---GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
G + + ++ M+ + ++P+ +T + + K L S +G+Q H +K+
Sbjct: 91 SQNGGISSSYTVMQLFREMRAQD--ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+V SL+ MY +E ++F M ++ W++++ G+ EA+ F
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 182 RMVQSGMRPDDATFVVT--LSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
++ D+ +V T LS+ A + GR +H CI L ++SN+LV MY+
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH-CITIKNGLLGFVALSNALVTMYS 267
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
KC ++ EA ++F S +N I+W+ M+ G + +G EA+ LF+ M ++P T +
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG-IKPSEYTIV 326
Query: 300 GVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
GVL ACS +++EG++ + + + + +VD+ +AG + +A +
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLADARKGFDCLQ- 384
Query: 360 ECNAIVWRSLLAA 372
E + +W SL++
Sbjct: 385 ERDVALWTSLISG 397
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 196/393 (49%), Gaps = 25/393 (6%)
Query: 18 QNHLVVGKIIVFCAVSV---------PAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTN 68
Q H +V K+ F + V AG + + VF + + + + W+TM+ G+
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198
Query: 69 QPEKAV----LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ E+A+ LF + ++G + F+ +L + V LG+Q+HC T+K G+
Sbjct: 199 RVEEAIKVFNLFLREKEEGSD----SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ N+L+ MY + + A ++F+ +++ + W++++ G+ EA+ F+RM
Sbjct: 255 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+G++P + T V L+AC + L G+ +HS + + + + + + +LVDMYAK G +
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA-TTALVDMYAKAGCL 373
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
+A + F ++ ++V W ++I G + + EAL L+ M ++ P+ T VL A
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII-PNDPTMASVLKA 432
Query: 305 CSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
CS ++ G++ + + + ++ + + + + G +E+ ++ + P + +
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTPNK-DV 489
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLE--LEP 394
+ W ++++ +G A ++ + +L +EP
Sbjct: 490 VSWNAMISGLSHNGQGDEALELFEEMLAEGMEP 522
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 106 SVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIID 165
++V G+ +H ++ G N L++ Y + AH +F ++ KD+V+WNS+I
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 166 CLVCCGKYNEA---LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRAT 222
G + + + F M + P+ T A ++ + GR H+ + + +
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 223 YLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLF 282
G+I V SLV MY K G VE+ ++F M +N +W+TM+ G A+ G EA+ +F
Sbjct: 149 SFGDIY-VDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 283 AEMLQENVVRPDG-ITFLGVLCACSHGGFVDEGRR 316
L+E D F VL + + +V GR+
Sbjct: 208 NLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 250/441 (56%), Gaps = 17/441 (3%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIV----FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
E+HA + + G+ N L VG ++ C ++ Y F R+ D W T+I
Sbjct: 407 ELHAYVIKHGWDSN-LQVGNTLIDMYSKCNLTC------YMGRAFLRMHDKDLISWTTVI 459
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
G+ + +A+ ++ + + + D +L+ L S+++ K++HC L+ G
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEI--DEMILGSILRASSVLKSMLIVKEIHCHILRKG 517
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+ + ++N L+ +YG +++ A ++FE + KD+V+W S+I G +EA++ F
Sbjct: 518 LLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFR 576
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
RMV++G+ D + LSA ++ AL GR +H + R + E S++ ++VDMYA C
Sbjct: 577 RMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE-GSIAVAVVDMYACC 635
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G ++ A +F ++ K ++ + +MI HG G A+ LF +M ENV PD I+FL +
Sbjct: 636 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV-SPDHISFLAL 694
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
L ACSH G +DEGR + IM +Y ++P +HY C+VD+LGRA V EA+ +K M E
Sbjct: 695 LYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEP 754
Query: 362 NAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERR 421
A VW +LLAACR+H ++ E + LLELEP + + VL++N++A G+WN++ K R
Sbjct: 755 TAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRA 814
Query: 422 SMQERGVKKPEPGNSFVGLPG 442
M+ G++K PG S++ + G
Sbjct: 815 KMKASGMEK-HPGCSWIEMDG 834
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 11/286 (3%)
Query: 5 KEIHARIYQT--GFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
+++H+RI++T F + L GK++ G ++ A VFD + AF WNTMI
Sbjct: 100 RQLHSRIFKTFPSFELDFLA-GKLVFMYG---KCGSLDDAEKVFDEMPDRTAFAWNTMIG 155
Query: 63 GFGNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
+ + +P A+ Y M+ +G P + +F LLK L + G +LH +KLG
Sbjct: 156 AYVSNGEPASALALYWNMRVEGVPLGLS---SFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK-DLVAWNSIIDCLVCCGKYNEALDFF 180
+ + N+L+ MY D+ A +LF+ K D V WNSI+ GK E L+ F
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
M +G P+ T V L+AC G+ +H+ + +++ V N+L+ MY +
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTR 332
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEML 286
CG + +A I R M +V++WN++I G + EAL F++M+
Sbjct: 333 CGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 8/287 (2%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRV-DKPDAFLWNTMIRGF 64
E+H+ + + G+H +V ++ A + D++ A +FD +K DA LWN+++ +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKN---DDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV-E 123
+ + + + ++ M P P+++T L G LGK++H S LK
Sbjct: 260 STSGKSLETLELFREMHMTGP--APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+ +V N+LI MY + A ++ +M N D+V WNS+I V Y EAL+FF+ M
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
+ +G + D+ + ++A G + L G +H+ + + + + V N+L+DMY+KC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL-QVGNTLIDMYSKCNL 436
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
F M K++ISW T+I G A + EAL LF ++ ++ +
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 144/326 (44%), Gaps = 7/326 (2%)
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAH-VRNSLIHMYGVMKDIETAHQLFEE 151
F+++L++ G +V G+QLH K + L+ MYG ++ A ++F+E
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 152 MLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFG 211
M ++ AWN++I V G+ AL + M G+ ++F L AC + + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 212 RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLA 270
+HS + + Y + N+LV MYAK + A +F + K + + WN+++ +
Sbjct: 202 SELHSLLVKLGY-HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT 330
+ G E L LF EM P+ T + L AC + G+ + +
Sbjct: 261 TSGKSLETLELFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
+ ++ + R G + +A +++ M + + W SL+ N+ E +
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKGYVQ--NLMYKEALEFFSD 376
Query: 391 ELEPCHSSDYVLLANMYASTGQWNEM 416
+ H SD V + ++ A++G+ + +
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNL 402
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 4/200 (2%)
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
F R+ S F L CG A++ GR +HS I + E+ ++ LV MY
Sbjct: 68 FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYG 127
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGI-TF 298
KCG++++A ++F M + +WNTMI S+G AL L+ M E V P G+ +F
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV--PLGLSSF 185
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+L AC+ + G ++ + T +V + + + A L
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVK-LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 359 MECNAIVWRSLLAACRTHGN 378
+ +A++W S+L++ T G
Sbjct: 245 EKGDAVLWNSILSSYSTSGK 264
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 220/401 (54%), Gaps = 13/401 (3%)
Query: 58 NTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
+ ++G T + ++AV L + Q EP T++ LL+ GK++H
Sbjct: 80 DKTLKGLCVTGRLKEAVGLLWSSGLQVEPE------TYAVLLQECKQRKEYTKGKRIHAQ 133
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
+G + +++ L+ +Y + D++TA LF + +DL+ WN++I V G E
Sbjct: 134 MFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEG 193
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
L + M Q+ + PD TF AC A+ L G+ H+ + + I V ++LVD
Sbjct: 194 LFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII-VDSALVD 252
Query: 237 MYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGI 296
MY KC + + + +F + +NVI+W ++I G HG +E L F +M +E RP+ +
Sbjct: 253 MYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC-RPNPV 311
Query: 297 TFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
TFL VL AC+HGG VD+G +F M RDY ++P +HY MVD LGRAG ++EAY +
Sbjct: 312 TFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMK 371
Query: 357 MPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEM 416
P + + VW SLL ACR HGNVKL E LEL+P + +YV+ AN YAS G
Sbjct: 372 SPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAA 431
Query: 417 SKERRSMQERGVKKPEPGNSFVGLPG---IRLENETAERLS 454
SK RR M+ GVKK +PG S + L G ++++T+ RLS
Sbjct: 432 SKVRRKMENAGVKK-DPGYSQIELQGEVHRFMKDDTSHRLS 471
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 136/272 (50%), Gaps = 8/272 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K IHA+++ GF N + K+++ A+S GD+ A +F + D WN MI G+
Sbjct: 128 KRIHAQMFVVGFALNEYLKVKLLILYALS---GDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
++ + Y M+Q +VPD +TF+ + + L + GK+ H +K +++
Sbjct: 185 VQKGLEQEGLFIYYDMRQN--RIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKS 242
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ V ++L+ MY H++F+++ ++++ W S+I GK +E L F +M
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMK 302
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS-NSLVDMYAKCGA 243
+ G RP+ TF+V L+AC G + G W H + Y E ++VD + G
Sbjct: 303 EEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGR 361
Query: 244 VEEAYE-IFRSMKGKNVISWNTMILGLASHGN 274
++EAYE + +S ++ W +++ HGN
Sbjct: 362 LQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN 393
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 244/465 (52%), Gaps = 47/465 (10%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K+IHA I +TGF + + K+++ + + G ++YA VFD + KP +N MI G+
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLI---LHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 65 GNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTFSFLLKIVGGLGSVV-----LGKQLHCSTL 118
++ +L +RM GE D +T S +LK GS + L + +H +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEK---ADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII 167
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN------------------------ 154
K VE + +L+ Y +E+A +FE M +
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 155 -------KDLVAWNSIIDCLVCCGKY-NEALDFFTRMVQSGMRPDDATFVVTLSACGAMG 206
KD+V +N++++ G+ ++D + M ++G P+ +TF + AC +
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMI 266
+ G+ VH+ I ++ I + +SL+DMYAKCG + +A +F M+ KNV SW +MI
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHI-KMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYN 326
G +GN EAL LF M +E + P+ +TFLG L ACSH G VD+G F+ M RDY+
Sbjct: 347 DGYGKNGNPEEALELFTRM-KEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYS 405
Query: 327 VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVR 386
++P ++HY C+VDL+GRAG + +A+ + MP ++ +W +LL++C HGNV+LA
Sbjct: 406 MKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAA 465
Query: 387 KHLLELEP-CHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKK 430
L +L Y+ L+N+YAS +W+ +SK R M+ R + K
Sbjct: 466 SELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISK 510
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 167/443 (37%), Gaps = 103/443 (23%)
Query: 79 RMQQGEPHVVPDTFTFSFLLK-----------IVGGLGSVV------LGKQLHCSTLKLG 121
R P ++P +F LK I G L + GK++H +K G
Sbjct: 5 RFTSISPRILPSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTG 64
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+ ++ L+ ++ + A Q+F+E+ L A+N +I + G E L
Sbjct: 65 FQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQ 124
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGAL-----AFGRWVHSCIQRATYLGEITSV-SNSLV 235
RM SG + D T + L A + G+ + R VH+ I + E+ V +LV
Sbjct: 125 RMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV--ELDDVLITALV 182
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV---- 291
D Y K G +E A +F +MK +NV+ +MI G + G +A +F +++V
Sbjct: 183 DTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNA 242
Query: 292 ---------------------------RPDGITFLGVLCACS-----------HG----- 308
P+ TF V+ ACS H
Sbjct: 243 MVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS 302
Query: 309 -------------------GFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEE 349
G +++ RR FD M + V + M+D G+ G EE
Sbjct: 303 GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-----EKNVFSWTSMIDGYGKNGNPEE 357
Query: 350 A---YILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHL---LELEPCHSSDYVLL 403
A + +K +E N + + L+AC G V ++ + + ++P Y +
Sbjct: 358 ALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP-KMEHYACI 416
Query: 404 ANMYASTGQWNEMSKERRSMQER 426
++ G N+ + R+M ER
Sbjct: 417 VDLMGRAGDLNKAFEFARAMPER 439
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 230/411 (55%), Gaps = 13/411 (3%)
Query: 30 CAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVP 89
C+V++ A A +F + + W T+I GF + + YK+M V P
Sbjct: 159 CSVTMEA-----ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP 213
Query: 90 DTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLF 149
+ + ++ + SV GKQ+H S +K G +++ V NS++ +Y + A F
Sbjct: 214 --YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYF 271
Query: 150 EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA 209
EM +KDL+ WN++I L +EAL F R G P+ TF ++AC + AL
Sbjct: 272 HEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALN 330
Query: 210 FGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM-KGKNVISWNTMILG 268
G+ +H I R + + ++N+L+DMYAKCG + ++ +F + +N++SW +M++G
Sbjct: 331 CGQQLHGRIFRRGFNKNV-ELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIG 389
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
SHG G EA+ LF +M+ + RPD I F+ VL AC H G V++G +YF++M +Y +
Sbjct: 390 YGSHGYGAEAVELFDKMVSSGI-RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGIN 448
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV-RK 387
P Y C+VDLLGRAG + EAY L++ MP + + W ++L AC+ H + L ++ +
Sbjct: 449 PDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAAR 508
Query: 388 HLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
++EL+P YV+L+ +YA+ G+W + ++ R+ M+ G KK E G S++
Sbjct: 509 KVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKK-EAGMSWI 558
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 177/363 (48%), Gaps = 14/363 (3%)
Query: 18 QNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKA-VLF 76
++H++ +IV G + A S+FD + D W MI G+ ++N +A F
Sbjct: 43 KHHILATNLIV---SYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECF 99
Query: 77 YKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMY 136
++ ++QG P+ FT S +LK + + G +H +KLG+E +V N++++MY
Sbjct: 100 HEMVKQGTS---PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMY 156
Query: 137 GVMK-DIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATF 195
+E A +F ++ K+ V W ++I G L + +M+
Sbjct: 157 ATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCI 216
Query: 196 VVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMK 255
+ + A ++ ++ G+ +H+ + + + + V NS++D+Y +CG + EA F M+
Sbjct: 217 TIAVRASASIDSVTTGKQIHASVIKRGFQSNL-PVMNSILDLYCRCGYLSEAKHYFHEME 275
Query: 256 GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGR 315
K++I+WNT+I L + +EAL +F + V P+ TF ++ AC++ ++ G+
Sbjct: 276 DKDLITWNTLISEL-ERSDSSEALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQ 333
Query: 316 R-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACR 374
+ + I R +N V+ ++D+ + G + ++ + + N + W S++
Sbjct: 334 QLHGRIFRRGFN--KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 375 THG 377
+HG
Sbjct: 392 SHG 394
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 150/314 (47%), Gaps = 10/314 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
K+IHA + + GF N V+ I+ ++C G ++ A F ++ D WNT+I
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCR----CGYLSEAKHYFHEMEDKDLITWNTLISE 288
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
++ E ++F + QG VP+ +TF+ L+ + ++ G+QLH + G
Sbjct: 289 LERSDSSEALLMFQRFESQG---FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLN-KDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ + N+LI MY +I + ++F E+++ ++LV+W S++ G EA++ F +
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
MV SG+RPD F+ LSAC G + G + ++ + + N +VD+ + G
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 243 AVEEAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
+ EAYE+ M K + +W ++ +H + L A + E + G +
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 302 LCACSHGGFVDEGR 315
+ G +VD R
Sbjct: 526 YIYAAEGKWVDFAR 539
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 26/291 (8%)
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ H + +LI Y +E A LF+EM ++D+VAW ++I A + F
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
MV+ G P++ T L +C M LA+G VH + + G + V N++++MYA C
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLY-VDNAMMNMYATCS 160
Query: 243 -AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV-VRPDGITFLG 300
+E A IFR +K KN ++W T+I G G+G L ++ +ML EN V P IT +
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT-IA 219
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
V + S + + ++ R + Q + ++DL R G + EA M +
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGF--QSNLPVMNSILDLYCRCGYLSEAKHYFHEME-D 276
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTG 411
+ I W +L++ ELE SS+ +L+ + S G
Sbjct: 277 KDLITWNTLIS-------------------ELERSDSSEALLMFQRFESQG 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 41/206 (19%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVF-DRVDKPDAFLWNT 59
+N +++H RI++ GF++N + +I A G++ + VF + VD+ + W +
Sbjct: 329 LNCGQQLHGRIFRRGFNKNVELANALIDMYA---KCGNIPDSQRVFGEIVDRRNLVSWTS 385
Query: 60 MIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
M+ G+G+ +AV LF K + G + PD F +L
Sbjct: 386 MMIGYGSHGYGAEAVELFDKMVSSG---IRPDRIVFMAVLSAC----------------- 425
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
HA + + + VM+ E +N D +N ++D L GK EA +
Sbjct: 426 -----RHAGLVEKGLKYFNVMES--------EYGINPDRDIYNCVVDLLGRAGKIGEAYE 472
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGA 204
RM +PD++T+ L AC A
Sbjct: 473 LVERM---PFKPDESTWGAILGACKA 495
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/477 (31%), Positives = 247/477 (51%), Gaps = 43/477 (9%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K +HA I + G Q + ++ V G ++A+ VFD + D W +++
Sbjct: 23 KALHAHIVKLGIVQCCPLANTLV---NVYGKCGAASHALQVFDEMPHRDHIAWASVLTAL 79
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
N K L + PD F FS L+K LGS+ G+Q+HC + N
Sbjct: 80 NQANLSGK-TLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF---- 180
V++SL+ MY + +A +F+ + K+ ++W +++ G+ EAL+ F
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 181 -----------TRMVQSG-----------MRP------DDATFVVTLSACGAMGALAFGR 212
+ VQSG MR D + AC + A GR
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
VH + A +SN+L+DMYAKC V A +IF M+ ++V+SW ++I+G+A H
Sbjct: 259 QVHGLVI-ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQH 317
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
G +AL L+ +M+ V +P+ +TF+G++ ACSH GFV++GR F M++DY ++P+++
Sbjct: 318 GQAEKALALYDDMVSHGV-KPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQ 376
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL-E 391
HY C++DLLGR+GL++EA LI MP + W +LL+AC+ G ++ ++ HL+
Sbjct: 377 HYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSS 436
Query: 392 LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLENE 448
+ S Y+LL+N+YAS W ++S+ RR + E V+K +PG+S V +R E E
Sbjct: 437 FKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRK-DPGHSSV---EVRKETE 489
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 35/309 (11%)
Query: 106 SVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIID 165
++ K LH +KLG+ + N+L+++YG A Q+F+EM ++D +AW S++
Sbjct: 18 TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLT 77
Query: 166 CLVCCGKYNEAL-DFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYL 224
L + L F + SG+RPDD F + AC +G++ GR VH + Y
Sbjct: 78 ALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYA 137
Query: 225 GEITSVSNSLVDMYAKCGAV-------------------------------EEAYEIFRS 253
+ V +SLVDMYAKCG + EEA E+FR
Sbjct: 138 ND-EVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 254 MKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDE 313
+ KN+ SW +I G G G EA ++F EM +E V D + ++ AC++
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIA 256
Query: 314 GRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAAC 373
GR+ ++ V ++D+ + V A + M + + W SL+
Sbjct: 257 GRQVHGLVIA-LGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR-DVVSWTSLIVGM 314
Query: 374 RTHGNVKLA 382
HG + A
Sbjct: 315 AQHGQAEKA 323
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 238/413 (57%), Gaps = 10/413 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G ++ A+ +F ++ + W TMI G + +A+ +K M + + + F+
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLR--CCIKSTSRPFTC 230
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
++ + +G Q+H +KLG +V SLI Y K I + ++F+E +++
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
+ W +++ K+ +AL F+ M+++ + P+ +TF L++C A+G L +G+ +H
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 217 CIQRATYLGEITS--VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN 274
A LG T V NSLV MY+ G V +A +F + K+++SWN++I+G A HG
Sbjct: 351 V---AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR 407
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYN-VQPTVKH 333
G A +F +M++ N PD ITF G+L ACSH GF+++GR+ F MS N + ++H
Sbjct: 408 GKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQH 466
Query: 334 YGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELE 393
Y CMVD+LGR G ++EA LI+ M ++ N +VW +LL+ACR H +V EK + L+
Sbjct: 467 YTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLD 526
Query: 394 PCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIRLE 446
S+ YVLL+N+YAS G+W+ +SK R M++ G+ K +PG+S+V + G + E
Sbjct: 527 SKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMK-KPGSSWVVIRGKKHE 578
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 164/358 (45%), Gaps = 22/358 (6%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A+++FD + D WN+MI G AV + M P+ S+ +
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM--------PERSVVSWTAMVN 136
Query: 102 GGLGSVVLGKQLHCSTL--KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVA 159
G S GK L ++ V++ A NS++H Y ++ A +LF++M K++++
Sbjct: 137 GCFRS---GKVDQAERLFYQMPVKDTA-AWNSMVHGYLQFGKVDDALKLFKQMPGKNVIS 192
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
W ++I L + EALD F M++ ++ F ++AC A G VH I
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
+ +L E VS SL+ YA C + ++ ++F + V W ++ G + + +AL
Sbjct: 253 KLGFLYE-EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDAL 311
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
++F+ ML+ N + P+ TF L +CS G +D G+ + + ++ +V
Sbjct: 312 SIFSGMLR-NSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK-LGLETDAFVGNSLVV 369
Query: 340 LLGRAGLVEEAY-ILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL--EP 394
+ +G V +A + IK + + + W S++ C HG K A + ++ L EP
Sbjct: 370 MYSDSGNVNDAVSVFIK--IFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
H + +I Y + A LF+EM +D+V+WNS+I V CG N A+ F M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI--TSVSNSLVDMYAKCG 242
+ + ++ ++ C G + +R Y + T+ NS+V Y + G
Sbjct: 125 ERSV----VSWTAMVNGCFRSGKVDQA-------ERLFYQMPVKDTAAWNSMVHGYLQFG 173
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQ---ENVVRPDGITFL 299
V++A ++F+ M GKNVISW TMI GL + EAL LF ML+ ++ RP F
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP----FT 229
Query: 300 GVLCACSHG 308
V+ AC++
Sbjct: 230 CVITACANA 238
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 230/396 (58%), Gaps = 7/396 (1%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
++SVF + + F WN +I F + K++ + RM + E V PD FT +L+
Sbjct: 86 SLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWR-ESCVRPDDFTLPLILRAC 144
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWN 161
G +H LKLG + V ++L+ MY M + A +LF++M +D V +
Sbjct: 145 SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYT 204
Query: 162 SIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQR 220
++ V G+ L F M SG D V L ACG +GAL G+ VH CI+R
Sbjct: 205 AMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR 264
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALT 280
+ LG ++ N++ DMY KC ++ A+ +F +M ++VISW+++ILG G+ +
Sbjct: 265 CSCLG--LNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFK 322
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDL 340
LF EML+E + P+ +TFLGVL AC+HGG V++ YF +M ++YN+ P +KHY + D
Sbjct: 323 LFDEMLKEGI-EPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADC 380
Query: 341 LGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDY 400
+ RAGL+EEA +++MP++ + V ++L+ C+ +GNV++ E+V + L++L+P +S Y
Sbjct: 381 MSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYY 440
Query: 401 VLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNS 436
V LA +Y++ G+++E R+ M+E+ + K PG S
Sbjct: 441 VTLAGLYSAAGRFDEAESLRQWMKEKQISKV-PGCS 475
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 158/456 (34%), Positives = 241/456 (52%), Gaps = 30/456 (6%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVS---VFDRVDKPDAFLWNTMI 61
K+IHA++ G H N L I +C S P+ + + ++ VF R PD FL+NT++
Sbjct: 25 KQIHAQLVINGCHDNSLFGKLIGHYC--SKPSTESSSKLAHLLVFPRFGHPDKFLFNTLL 82
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLL---KIVGGLGSVVLGKQLHCSTL 118
+ ++PE ++ + + + TF F+L ++ +G+ +H
Sbjct: 83 K----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVK 138
Query: 119 KLGVENHAH-VRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVC---CGKYN 174
KLG + + +L+H Y D+ A ++F+EM + V WN++I G +N
Sbjct: 139 KLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHN 198
Query: 175 --EALDFFTRM--VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI-TS 229
+A+ F R SG+RP D T V LSA G L G VH I++ + E+
Sbjct: 199 ARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVF 258
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
+ +LVDMY+KCG + A+ +F MK KNV +W +M GLA +G G E L M E+
Sbjct: 259 IGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM-AES 317
Query: 290 VVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEE 349
++P+ ITF +L A H G V+EG F M + V P ++HYGC+VDLLG+AG ++E
Sbjct: 318 GIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQE 377
Query: 350 AYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEP-------CHSSDYVL 402
AY I MP++ +AI+ RSL AC +G + E++ K LLE+E DYV
Sbjct: 378 AYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVA 437
Query: 403 LANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
L+N+ A G+W E+ K R+ M+ER +K PG SFV
Sbjct: 438 LSNVLAHKGKWVEVEKLRKEMKERRIKT-RPGYSFV 472
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 223/432 (51%), Gaps = 19/432 (4%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++H +TG+ + LV + + D A VF+ +++ D WNTMI +
Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYS---SFEDFGAAHKVFESLEEKDLVTWNTMISSYN 365
Query: 66 NTNQPEKAVLFYKRMQQGEPHVV---PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
+ A+ YKRM H++ PD FTF LL L + + + +K G+
Sbjct: 366 QAKLGKSAMSVYKRM-----HIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGL 417
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ + N+LI Y IE A LFE L K+L++WN+II G E L+ F+
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSC 477
Query: 183 MVQSGMR--PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+++S +R PD T LS C + +L G H+ + R E T + N+L++MY++
Sbjct: 478 LLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKE-TLIGNALINMYSQ 536
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG ++ + E+F M K+V+SWN++I + HG G A+ + M E V PD TF
Sbjct: 537 CGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSA 596
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIK--NMP 358
VL ACSH G V+EG F+ M + V V H+ C+VDLLGRAG ++EA L+K
Sbjct: 597 VLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKT 656
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
+ VW +L +AC HG++KL + V K L+E E S YV L+N+YA G W E +
Sbjct: 657 IGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEE 716
Query: 419 ERRSMQERGVKK 430
RR++ G K
Sbjct: 717 TRRAINMIGAMK 728
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 174/379 (45%), Gaps = 24/379 (6%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVF---CAVSVPAGDMNYAVSVFDRVDKP--DAFLWNT 59
K++H+ + + GF VV +I C V V A VF+ D D +N
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDA------CLVFEETDVAVRDQVTFNV 262
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+I G + E ++F K + E + P TF + ++G +G Q+H +K
Sbjct: 263 VIDGLAGFKRDESLLVFRKML---EASLRPTDLTF---VSVMGSCSCAAMGHQVHGLAIK 316
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G E + V N+ + MY +D AH++FE + KDLV WN++I A+
Sbjct: 317 TGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
+ RM G++PD+ TF L+ + L V +CI + +I +SN+L+ Y+
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKI-EISNALISAYS 432
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV-VRPDGITF 298
K G +E+A +F KN+ISWN +I G +G E L F+ +L+ V + PD T
Sbjct: 433 KNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTL 492
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+L C + G + + R + T+ ++++ + G ++ + + M
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG-NALINMYSQCGTIQNSLEVFNQMS 551
Query: 359 MECNAIVWRSLLAACRTHG 377
E + + W SL++A HG
Sbjct: 552 -EKDVVSWNSLISAYSRHG 569
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 175/351 (49%), Gaps = 19/351 (5%)
Query: 31 AVSVPAGDMNYAVSVFDRV-DKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQ-GEPHVV 88
+ S GD+ YA VFD++ ++ D +WN MI G + E +V ++ M + G H
Sbjct: 131 SASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRH-- 188
Query: 89 PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQL 148
D F F+ +L + GS+ GKQ+H +K G + V N+LI MY + + A +
Sbjct: 189 -DKFGFATILSMCD-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLV 246
Query: 149 FEE--MLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG 206
FEE + +D V +N +ID L K +E+L F +M+++ +RP D TFV + +C
Sbjct: 247 FEETDVAVRDQVTFNVVIDGLAGF-KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA- 304
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMI 266
A G VH + Y + T VSN+ + MY+ A+++F S++ K++++WNTMI
Sbjct: 305 --AMGHQVHGLAIKTGY-EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMI 361
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYN 326
G A++++ M V+PD TF G L A S V E + I +
Sbjct: 362 SSYNQAKLGKSAMSVYKRM-HIIGVKPDEFTF-GSLLATSLDLDVLEMVQACII---KFG 416
Query: 327 VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
+ ++ ++ + G +E+A +L + + N I W ++++ +G
Sbjct: 417 LSSKIEISNALISAYSKNGQIEKADLLFER-SLRKNLISWNAIISGFYHNG 466
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 160/350 (45%), Gaps = 61/350 (17%)
Query: 89 PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYG----------- 137
PD ++ S + L + G Q+HC ++ G+ H+HV N+L+ +Y
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 138 --------------------VMKDIETAHQLFEEMLNKDLVA-WNSIIDCLVCCGKYNEA 176
+ DIE A ++F++M +D VA WN++I G + +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
++ F M + G+R D F LS C G+L FG+ VHS + +A + +SV N+L+
Sbjct: 175 VELFREMHKLGVRHDKFGFATILSMCD-YGSLDFGKQVHSLVIKAGFFIA-SSVVNALIT 232
Query: 237 MYAKCGAVEEAYEIFR--SMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
MY C V +A +F + ++ +++N +I GLA E+L +F +ML E +RP
Sbjct: 233 MYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKML-EASLRPT 290
Query: 295 GITFLGVLCACS--------HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGL 346
+TF+ V+ +CS HG + G + ++S T+ Y D G A
Sbjct: 291 DLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVS-----NATMTMYSSFED-FGAAHK 344
Query: 347 VEEAYILIKNMPMECNAIVWRSLLAACRTH--GNVKLAEKVRKHLLELEP 394
V E+ E + + W +++++ G ++ R H++ ++P
Sbjct: 345 VFESL-------EEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKP 387
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 234/426 (54%), Gaps = 9/426 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
KEIH ++ ++V I+ + G+++YA +F+ + + + WN MI +
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSIL--DMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ A L +++M + + + PD T LL +++ G+ +H ++ G
Sbjct: 309 ARNGRVTDAFLCFQKMSE-QNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLP 363
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
H + +LI MYG +++A +F+ M K++++WNSII V GK AL+ F +
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
S + PD T L A +L+ GR +H+ I ++ Y T + NSLV MYA CG +
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSN-TIILNSLVHMYAMCGDL 482
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
E+A + F + K+V+SWN++I+ A HG G ++ LF+EM+ V P+ TF +L A
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV-NPNKSTFASLLAA 541
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CS G VDEG YF+ M R+Y + P ++HYGCM+DL+GR G A ++ MP A
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
+W SLL A R H ++ +AE + + ++E ++ YVLL NMYA G+W ++++ + M+
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Query: 425 ERGVKK 430
+G+ +
Sbjct: 662 SKGISR 667
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 181/339 (53%), Gaps = 8/339 (2%)
Query: 39 MNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLL 98
M A+ +FD ++K DAFLWN MI+GF + +AV FY RM V DTFT+ F++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA--GVKADTFTYPFVI 137
Query: 99 KIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLV 158
K V G+ S+ GK++H +KLG + +V NSLI +Y + A ++FEEM +D+V
Sbjct: 138 KSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIV 197
Query: 159 AWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCI 218
+WNS+I + G +L F M++ G +PD + + L AC + + G+ +H
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 219 QRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEA 278
R+ V S++DMY+K G V A IF M +N+++WN MI A +G T+A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 279 LTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV 338
F +M ++N ++PD IT + +L A + + EGR R P + ++
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALI 372
Query: 339 DLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
D+ G G ++ A ++ M E N I W S++AA +G
Sbjct: 373 DMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNG 410
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 219/407 (53%), Gaps = 11/407 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTFS 95
G M+ A VFDR+++ D W MI G+ E A+ + MQ +G V P+ T +
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG---VRPNAVTIA 323
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
L+ + G V GK LH ++ V + + SLI MY K ++ ++F
Sbjct: 324 SLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKY 383
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
W++II V ++AL F RM + + P+ AT L A A+ L +H
Sbjct: 384 HTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIH 443
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM----KGKNVISWNTMILGLAS 271
+ + ++ + + + LV +Y+KCG +E A++IF + K K+V+ W +I G
Sbjct: 444 CYLTKTGFMSSLDAAT-GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 272 HGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTV 331
HG+G AL +F EM++ V P+ ITF L ACSH G V+EG F M Y
Sbjct: 503 HGDGHNALQVFMEMVRSGVT-PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARS 561
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
HY C+VDLLGRAG ++EAY LI +P E + VW +LLAAC TH NV+L E L E
Sbjct: 562 NHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFE 621
Query: 392 LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
LEP ++ +YVLLAN+YA+ G+W +M K R M+ G++K +PG+S +
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRK-KPGHSTI 667
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 150/295 (50%), Gaps = 3/295 (1%)
Query: 22 VVGKIIVFCAVSVP-AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM 80
V G I+ +V+ G + YA +F+ + + +N +IR + A+ + RM
Sbjct: 47 VSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRM 106
Query: 81 QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMK 140
VPD +T+ F+ K G L S+ LG +H L+ +V+N+L+ MY
Sbjct: 107 VSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFG 166
Query: 141 DIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLS 200
+E A +F+ M N+D+++WN++I G N+AL F MV + D AT V L
Sbjct: 167 KVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP 226
Query: 201 ACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVI 260
CG + L GR VH ++ LG+ V N+LV+MY KCG ++EA +F M+ ++VI
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKR-LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI 285
Query: 261 SWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGR 315
+W MI G G+ AL L ++Q VRP+ +T ++ C V++G+
Sbjct: 286 TWTCMINGYTEDGDVENALEL-CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 167/384 (43%), Gaps = 29/384 (7%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+H RI ++ F ++ V ++ A+ + G + A VFD + D WNTMI G+
Sbjct: 139 VHGRILRSWFGRDKYVQNALL---AMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
A++ + M V D T +L + G L + +G+ +H + + +
Sbjct: 196 NGYMNDALMMFDWMVN--ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI 253
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
V+N+L++MY ++ A +F+ M +D++ W +I+ G AL+ M
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
G+RP+ T +S CG + G+ +H R +I + SL+ MYAKC V+
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII-IETSLISMYAKCKRVDL 372
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
+ +F + W+ +I G + ++AL LF M +E+ V P+ T +L A
Sbjct: 373 CFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED-VEPNIATLNSLLPA-- 429
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLV---------EEAYIL---I 354
+ D + + N+ + G M L GLV E A+ + I
Sbjct: 430 YAALAD--------LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGI 481
Query: 355 KNMPMECNAIVWRSLLAACRTHGN 378
+ + ++W +L++ HG+
Sbjct: 482 QEKHKSKDVVLWGALISGYGMHGD 505
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 254/491 (51%), Gaps = 48/491 (9%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+ HL ++HAR+ +G N I S GD +Y VS++ + K + N +
Sbjct: 35 ITHLFQVHARLITSG---NFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPV 89
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
+ + ++ P++A+ FY + + VPD++TF L+ + V GK H +K
Sbjct: 90 FKAYLVSSSPKQALGFYFDILRF--GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKH 147
Query: 121 GVENHAHVRNSLIHMY-----------------------------GVMK--DIETAHQLF 149
G + V+NSL+HMY G+++ D+ AH+LF
Sbjct: 148 GCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLF 207
Query: 150 EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA 209
+EM +K++++WN +I + ++ F MV++G + +++T V+ L+ACG L
Sbjct: 208 DEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLK 267
Query: 210 FGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGL 269
GR VH+ + R T+L + +L+DMY KC V A IF S+ +N ++WN MIL
Sbjct: 268 EGRSVHASLIR-TFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
HG L LF M+ ++RPD +TF+GVLC C+ G V +G+ Y+ +M ++ ++P
Sbjct: 327 CLHGRPEGGLELFEAMIN-GMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 330 TVKHYGCMVDLLGRAGLVEEAYILIKNMPME---CNAIVWRSLLAACRTHGNVKLAEKVR 386
H CM +L AG EEA +KN+P E + W +LL++ R GN L E +
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIA 445
Query: 387 KHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLP----G 442
K L+E +P + Y LL N+Y+ TG+W ++++ R ++ER + + PG V L G
Sbjct: 446 KSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRI-PGCGLVDLKEIVHG 504
Query: 443 IRLENETAERL 453
+RL + AE++
Sbjct: 505 LRLGCKEAEKV 515
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 235/431 (54%), Gaps = 43/431 (9%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQG--EPHVVPDTFT 93
AG + A +FD++ + D W TMI G NQ ++A+++Y M + +P V
Sbjct: 252 AGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDL 311
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDI----------- 142
S + VG G QLH + +K G + + ++ ++IH Y V DI
Sbjct: 312 LSASARSVGSSK----GLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASV 367
Query: 143 --------------------ETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
E A ++F++ +KD+ +WN++I AL F
Sbjct: 368 KDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFRE 427
Query: 183 MVQSG-MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
M+ S ++PD T V SA ++G+L G+ H + +T + +++ +++DMYAKC
Sbjct: 428 MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST-IPPNDNLTAAIIDMYAKC 486
Query: 242 GAVEEAYEIF---RSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
G++E A IF +++ + WN +I G A+HG+ AL L+++ LQ ++P+ ITF
Sbjct: 487 GSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD-LQSLPIKPNSITF 545
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+GVL AC H G V+ G+ YF+ M D+ ++P +KHYGCMVDLLG+AG +EEA +IK MP
Sbjct: 546 VGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP 605
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
++ + ++W LL+A RTHGNV++AE L ++P H V+L+N+YA G+W +++
Sbjct: 606 VKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVAL 665
Query: 419 ERRSMQERGVK 429
R M+ R V+
Sbjct: 666 VREEMRTRDVE 676
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 182/414 (43%), Gaps = 66/414 (15%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A+ +FD + + + T+I+G+ NQ +A+ ++ M+ ++ + T + ++
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRN--LGIMLNEVTLATVISAC 183
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGV---MKD----------------- 141
LG + + L +KL +E V +L+HMY + +KD
Sbjct: 184 SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWN 243
Query: 142 -----------IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRP 190
IE A +LF+++ KD+V+W ++ID + + +EAL ++T M++ GM+P
Sbjct: 244 VMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKP 303
Query: 191 DDATFVVTLSACGAMGALAFGRWVHSCI------------------------------QR 220
+ V LSA + G +H I Q
Sbjct: 304 SEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQF 363
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALT 280
+ + + N+L+ + K G VE+A E+F K++ SWN MI G A + AL
Sbjct: 364 EASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALH 423
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDL 340
LF EM+ + V+PD IT + V A S G ++EG+R D ++ + P ++D+
Sbjct: 424 LFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS-TIPPNDNLTAAIIDM 482
Query: 341 LGRAGLVEEAYILIKNMPMECNAIV--WRSLLAACRTHGNVKLAEKVRKHLLEL 392
+ G +E A + ++ + W +++ THG+ KLA + L L
Sbjct: 483 YAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL 536
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 125/301 (41%), Gaps = 33/301 (10%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVS----------------------------VPAG 37
++H I + GF + II F AVS V G
Sbjct: 326 QLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNG 385
Query: 38 DMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFL 97
+ A VFD+ D F WN MI G+ + P+ A+ ++ M V PD T +
Sbjct: 386 MVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISS-SQVKPDAITMVSV 444
Query: 98 LKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN--- 154
+ LGS+ GK+ H + + ++ ++I MY IETA +F + N
Sbjct: 445 FSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISS 504
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
+ WN+II G ALD ++ + ++P+ TFV LSAC G + G+
Sbjct: 505 STISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTY 564
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHG 273
++ + +VD+ K G +EEA E+ + M K +V+ W ++ +HG
Sbjct: 565 FESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
Query: 274 N 274
N
Sbjct: 625 N 625
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 134/283 (47%), Gaps = 47/283 (16%)
Query: 100 IVGGLGS------VVLGKQLHCSTLKLGVENHAHVRNSLIHMYG---VMKDIET------ 144
+V LGS V G+Q+HC LK G++++ ++ NS+++MY ++ D E+
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 145 ----------------------AHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
A +LF+ M + V++ ++I +++EA++ F
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
M G+ ++ T +SAC +G + R + S + G + VS +L+ MY C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVF-VSTNLLHMYCLCL 222
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+++A ++F M +N+++WN M+ G + G +A LF ++ ++++V ++ ++
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIV-----SWGTMI 277
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAG 345
C +DE Y+ M R ++P+ MVDLL +
Sbjct: 278 DGCLRKNQLDEALVYYTEMLR-CGMKPSEVM---MVDLLSASA 316
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 236/437 (54%), Gaps = 12/437 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPD--AFLWNTMI 61
+++H + + G V+ +I ++C + A A VF+ + + +N +I
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVAD----ARKVFEENPQSSQLSVCYNALI 128
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
G+ ++ A ++RM+ E V D+ T L+ + + LG+ LH +K G
Sbjct: 129 SGYTANSKVTDAAYMFRRMK--ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+++ V NS I MY +E +LF+EM K L+ WN++I G + L+ +
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
+M SG+ PD T V LS+C +GA G V ++ ++ + VSN+ + MYA+C
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVF-VSNASISMYARC 305
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G + +A +F M K+++SW MI HG G L LF +M++ + RPDG F+ V
Sbjct: 306 GNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI-RPDGAVFVMV 364
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
L ACSH G D+G F M R+Y ++P +HY C+VDLLGRAG ++EA I++MP+E
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEP 424
Query: 362 NAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERR 421
+ VW +LL AC+ H NV +AE ++E EP + YVL++N+Y+ + + + R
Sbjct: 425 DGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRV 484
Query: 422 SMQERGVKKPEPGNSFV 438
M+ER +K +PG S+V
Sbjct: 485 MMRERAFRK-KPGYSYV 500
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 150/324 (46%), Gaps = 10/324 (3%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
WN +R + +++ Y+ M + PD F+F F+LK L V G+QLHC
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSS--PDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE--MLNKDLVAWNSIIDCLVCCGKYN 174
K G E V +LI MY + A ++FEE ++ V +N++I K
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 175 EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH-SCIQRATYLGEITSVSNS 233
+A F RM ++G+ D T + + C L GR +H C++ L +V NS
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG--LDSEVAVLNS 196
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRP 293
+ MY KCG+VE +F M K +I+WN +I G + +G + L L+ +M V P
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC-P 255
Query: 294 DGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYIL 353
D T + VL +C+H G G ++ + V P V + + R G + +A +
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSNASISMYARCGNLAKARAV 314
Query: 354 IKNMPMECNAIVWRSLLAACRTHG 377
MP++ + + W +++ HG
Sbjct: 315 FDIMPVK-SLVSWTAMIGCYGMHG 337
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 231/428 (53%), Gaps = 10/428 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IHA + + G N + I+ + V G + A VFD++ ++ G+
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIV---NMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGY 260
Query: 65 GNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ A+ LF + +G V D+F FS +LK L + LGKQ+H KLG+E
Sbjct: 261 TQAGRARDALKLFVDLVTEG---VEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+ V L+ Y E+A + F+E+ + V+W++II ++ EA+ F +
Sbjct: 318 SEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Query: 184 -VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
++ + T+ AC + G VH+ + + +G S +L+ MY+KCG
Sbjct: 378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES-ALITMYSKCG 436
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+++A E+F SM ++++W I G A +GN +EAL LF +M+ + +P+ +TF+ VL
Sbjct: 437 CLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM-KPNSVTFIAVL 495
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
ACSH G V++G+ D M R YNV PT+ HY CM+D+ R+GL++EA +KNMP E +
Sbjct: 496 TACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
A+ W+ L+ C TH N++L E + L +L+P ++ YVL N+Y G+W E ++ +
Sbjct: 556 AMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKL 615
Query: 423 MQERGVKK 430
M ER +KK
Sbjct: 616 MNERMLKK 623
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 183/421 (43%), Gaps = 46/421 (10%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKI 100
A +FD + + +A TMI + +KAV LF + G+ P + ++ LLK
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK---PPSSMYTTLLKS 193
Query: 101 VGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAW 160
+ ++ G+Q+H ++ G+ ++ + +++MY + A ++F++M K VA
Sbjct: 194 LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAC 253
Query: 161 NSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQR 220
++ G+ +AL F +V G+ D F V L AC ++ L G+ +H+C+ +
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK 313
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALT 280
E+ SV LVD Y KC + E A F+ ++ N +SW+ +I G EA+
Sbjct: 314 LGLESEV-SVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVK 372
Query: 281 LFAEMLQENVVRPDGITFLGVLCACS------HGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
F + +N + T+ + ACS GG V ++ Y + Y
Sbjct: 373 TFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMY 432
Query: 335 ---GCMVD-------------------LLGRA--GLVEEAYILIKNM---PMECNAIVWR 367
GC+ D + G A G EA L + M M+ N++ +
Sbjct: 433 SKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFI 492
Query: 368 SLLAACRTHGNVK-----LAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
++L AC G V+ L +RK+ + H Y + ++YA +G +E K ++
Sbjct: 493 AVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDH---YDCMIDIYARSGLLDEALKFMKN 549
Query: 423 M 423
M
Sbjct: 550 M 550
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 148/301 (49%), Gaps = 8/301 (2%)
Query: 72 KAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA-HVRN 130
+A F + M + V ++++ L + L S+ G+ LH +++G+EN + ++N
Sbjct: 66 EAFEFLQEMDKAGVSV--SSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQN 122
Query: 131 SLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRP 190
++ MY + +E A +LF+EM + V+ ++I G ++A+ F+ M+ SG +P
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 191 DDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEI 250
+ + L + AL FGR +H+ + RA L TS+ +V+MY KCG + A +
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG-LCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 251 FRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGF 310
F M K ++ +++G G +AL LF +++ E V D F VL AC+
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEWDSFVFSVVLKACASLEE 300
Query: 311 VDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLL 370
++ G++ +++ ++ V +VD + E A + + E N + W +++
Sbjct: 301 LNLGKQIHACVAK-LGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAII 358
Query: 371 A 371
+
Sbjct: 359 S 359
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 41/250 (16%)
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS 231
K NEA +F M ++G+ ++ AC + +L+ GR +H ++ + +
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL-LQ 121
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQ---- 287
N ++ MY +C ++E+A ++F M N +S TMI A G +A+ LF+ ML
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 288 ----------ENVVRPDGITF--------------------LGVLCACSHGGFVDEGRRY 317
+++V P + F G++ G++ +R
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 318 FDIMSRDYNVQPTVKHYGCMVDLL--GRAGLVEEAYILIKNMPMECNAIVWRSLLAACRT 375
FD M+ V+ V G MV GRA + ++ + +E ++ V+ +L AC +
Sbjct: 242 FDQMA----VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 376 HGNVKLAEKV 385
+ L +++
Sbjct: 298 LEELNLGKQI 307
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 225/404 (55%), Gaps = 16/404 (3%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G ++ A +FD + + W TM+ G+G N+ + A + V+P+ S+
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD--------VMPEKTEVSW 237
Query: 97 LLKIVGGL--GSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN 154
++G + G + ++L ++ N++I G +I A ++F+ M
Sbjct: 238 TSMLMGYVQNGRIEDAEEL----FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKE 293
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
++ +W ++I G EALD F M + G+RP T + LS C ++ +L G+ V
Sbjct: 294 RNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN 274
H+ + R + ++ V++ L+ MY KCG + ++ IF K++I WN++I G ASHG
Sbjct: 354 HAQLVRCQFDVDVY-VASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGL 412
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
G EAL +F EM +P+ +TF+ L ACS+ G V+EG + ++ M + V+P HY
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEP 394
CMVD+LGRAG EA +I +M +E +A VW SLL ACRTH + +AE K L+E+EP
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 395 CHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
+S Y+LL+NMYAS G+W ++++ R+ M+ R V+K PG S+
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK-SPGCSWT 575
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 168/365 (46%), Gaps = 43/365 (11%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKA-VLFYKRMQQGEPHVVPDTFTFS 95
G+++ A VFD + + + W +++G+ + + + A LF+K +P+ S
Sbjct: 93 GEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK---------MPEKNKVS 143
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKD--IETAHQLFEEML 153
+ + ++G L + C ++ + R S+IH G+ K+ ++ A ++F+EM
Sbjct: 144 WTVMLIGFLQDGRIDDA--CKLYEMIPDKDNIARTSMIH--GLCKEGRVDEAREIFDEMS 199
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
+ ++ W +++ + ++A F M + + ++ L MG + GR
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSML-----MGYVQNGR- 249
Query: 214 VHSCIQRATYLGEITSVS-----NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
I+ A L E+ V N+++ + G + +A +F SMK +N SW T+I
Sbjct: 250 ----IEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKI 305
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR-DYNV 327
+G EAL LF ++Q+ VRP T + +L C+ + G++ + R ++V
Sbjct: 306 HERNGFELEALDLFI-LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV 364
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRK 387
V ++ + + G + ++ ++ P + + I+W S+++ +HG L E+ K
Sbjct: 365 DVYVA--SVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHG---LGEEALK 418
Query: 388 HLLEL 392
E+
Sbjct: 419 VFCEM 423
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 136/341 (39%), Gaps = 61/341 (17%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G ++ A +FD D WN+M+ G+ P A + M PD S+
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM--------PDRNIISW 82
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
N L+ Y +I+ A ++F+ M ++
Sbjct: 83 ---------------------------------NGLVSGYMKNGEIDEARKVFDLMPERN 109
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
+V+W +++ V GK + A F +M + + ++ V L +G L GR +
Sbjct: 110 VVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVML-----IGFLQDGRIDDA 160
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
C + S++ K G V+EA EIF M ++VI+W TM+ G +
Sbjct: 161 CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVD 220
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
+A +F M ++ V ++ +L G +++ F++M V+P +
Sbjct: 221 DARKIFDVMPEKTEV-----SWTSMLMGYVQNGRIEDAEELFEVMP----VKPVIA-CNA 270
Query: 337 MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
M+ LG+ G + +A + +M E N W++++ +G
Sbjct: 271 MISGLGQKGEIAKARRVFDSMK-ERNDASWQTVIKIHERNG 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 43/225 (19%)
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
N LV Y K G ++EA ++F M +NV+SW ++ G +G A +LF +M ++N V
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 292 R--------------------------PDGITFLGVLCACSHGGFVDEGRRYFDIMSRDY 325
D I ++ G VDE R FD MS
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS--- 199
Query: 326 NVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV 385
+ +V + MV G+ V++A + MP E + W S+L +G ++ AE+
Sbjct: 200 --ERSVITWTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAEE- 255
Query: 386 RKHLLELEPCHSSDYVLLAN-MYASTGQWNEMSKERR---SMQER 426
L E+ P V+ N M + GQ E++K RR SM+ER
Sbjct: 256 ---LFEVMPVKP---VIACNAMISGLGQKGEIAKARRVFDSMKER 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 220 RATYLGEITS-VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEA 278
R TY I +N + ++ G + EA ++F S K++ SWN+M+ G ++ +A
Sbjct: 8 RRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDA 67
Query: 279 LTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV 338
LF EM N+ I++ G++ G +DE R+ FD+M + V + +V
Sbjct: 68 RKLFDEMPDRNI-----ISWNGLVSGYMKNGEIDEARKVFDLMP-----ERNVVSWTALV 117
Query: 339 DLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV 385
G V+ A L MP E N + W +L G + A K+
Sbjct: 118 KGYVHNGKVDVAESLFWKMP-EKNKVSWTVMLIGFLQDGRIDDACKL 163
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 227/434 (52%), Gaps = 41/434 (9%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH + G L VG +V ++ G ++ A V D + + D WN+++ G+
Sbjct: 160 RKIHGSATKVGLSST-LFVGNGLV--SMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGY 216
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ + A+ + M+ + + D T + LL V + EN
Sbjct: 217 AQNQRFDDALEVCREMESVK--ISHDAGTMASLLPAVSNTTT----------------EN 258
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+V++ +F +M K LV+WN +I + EA++ ++RM
Sbjct: 259 VMYVKD-----------------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME 301
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
G PD + L ACG AL+ G+ +H I+R + + + N+L+DMYAKCG +
Sbjct: 302 ADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL-LENALIDMYAKCGCL 360
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
E+A ++F +MK ++V+SW MI G G +A+ LF++ LQ++ + PD I F+ L A
Sbjct: 361 EKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK-LQDSGLVPDSIAFVTTLAA 419
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CSH G ++EGR F +M+ Y + P ++H CMVDLLGRAG V+EAY I++M ME N
Sbjct: 420 CSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNER 479
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
VW +LL ACR H + + L +L P S YVLL+N+YA G+W E++ R M+
Sbjct: 480 VWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMK 539
Query: 425 ERGVKKPEPGNSFV 438
+G+KK PG S V
Sbjct: 540 SKGLKK-NPGASNV 552
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 168/371 (45%), Gaps = 46/371 (12%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
L+ +H+RI N + K++ A D+ A VFD + + + + N MIR
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYA---SLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ N + V + M +V PD +TF +LK G++V+G+++H S K+G+
Sbjct: 115 YVNNGFYGEGVKVFGTMCGC--NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+ V N L+ MYG + A + +EM +D+V+WNS++ ++++AL+ M
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD--MYAKC 241
+ D G M +L + +VSN+ + MY K
Sbjct: 233 ESVKISHD----------AGTMASL------------------LPAVSNTTTENVMYVK- 263
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
++F M K+++SWN MI + EA+ L++ M + + PD ++ V
Sbjct: 264 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM-EADGFEPDAVSITSV 315
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
L AC + G++ + R + P + ++D+ + G +E+A + +NM
Sbjct: 316 LPACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR- 373
Query: 362 NAIVWRSLLAA 372
+ + W ++++A
Sbjct: 374 DVVSWTAMISA 384
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 221/408 (54%), Gaps = 12/408 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQ------PEKAVLFYKRMQQGEPHVVPD 90
G + A+ +F + + +N MI GF ++ E LF ++G + P
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG---LEPS 357
Query: 91 TFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFE 150
TFS +LK ++ G+Q+H K ++ + ++LI +Y +M E Q F
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA 417
Query: 151 EMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAF 210
+D+ +W S+IDC V + A D F ++ S +RP++ T + +SAC AL+
Sbjct: 418 STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSS 477
Query: 211 GRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLA 270
G + ++ + TSV S + MYAK G + A ++F ++ +V +++ MI LA
Sbjct: 478 GEQIQGYAIKSG-IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLA 536
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT 330
HG+ EAL +F E ++ + ++P+ FLGVL AC HGG V +G +YF M DY + P
Sbjct: 537 QHGSANEALNIF-ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPN 595
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
KH+ C+VDLLGR G + +A LI + + + + WR+LL++CR + + + ++V + L+
Sbjct: 596 EKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLM 655
Query: 391 ELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
ELEP S YVLL N+Y +G + + R M++RGVKK EP S++
Sbjct: 656 ELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKK-EPALSWI 702
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 189/401 (47%), Gaps = 35/401 (8%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+H + G Q ++ +I + G ++ A+S+FDR D+ D WN++I G+
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYS---KCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLK---IVGGLGSVVLGKQLHCSTLKLGVE 123
E+ + +M + ++ T+ +LK I G + G +HC T KLG+E
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLT--TYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGME 284
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKY-----NEALD 178
VR +L+ MY ++ A +LF M +K++V +N++I + + +EA
Sbjct: 285 FDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFK 344
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
F M + G+ P +TF V L AC A L +GR +H+ I + + + + ++L+++Y
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD-EFIGSALIELY 403
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
A G+ E+ + F S +++ SW +MI + A LF ++ + +RP+ T
Sbjct: 404 ALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH-IRPEEYTV 462
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCM----VDLLGRAG---LVEEAY 351
++ AC+ + G + + Y ++ + + + + + ++G L + +
Sbjct: 463 SLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 352 ILIKNMPMECNAIVWRSLLAACRTHGNVKLA----EKVRKH 388
I ++N P + + +++++ HG+ A E ++ H
Sbjct: 518 IEVQN-P---DVATYSAMISSLAQHGSANEALNIFESMKTH 554
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 151/320 (47%), Gaps = 13/320 (4%)
Query: 38 DMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFL 97
++ +A +FDR+ + + +N++I G+ E+A+ + ++ E ++ D FT++
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELF--LEAREANLKLDKFTYAGA 154
Query: 98 LKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDL 157
L G + LG+ LH + G+ + N LI MY ++ A LF+ +D
Sbjct: 155 LGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQ 214
Query: 158 VAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGA---MGALAFGRWV 214
V+WNS+I V G E L+ +M + G+ L AC G + G +
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGL----- 269
H + +I V +L+DMYAK G+++EA ++F M KNV+++N MI G
Sbjct: 275 HCYTAKLGMEFDIV-VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
+ +EA LF +M Q + P TF VL ACS ++ GR+ ++ ++ N Q
Sbjct: 334 ITDEASSEAFKLFMDM-QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN-NFQS 391
Query: 330 TVKHYGCMVDLLGRAGLVEE 349
+++L G E+
Sbjct: 392 DEFIGSALIELYALMGSTED 411
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 34/329 (10%)
Query: 64 FGNTNQPEKAVLFYKRMQQG--------EP-HVVPDTFTFSFLLKIVGGLGSVVLGKQLH 114
F N Q L KR+ G +P + D+ + L + GSVVLGK H
Sbjct: 11 FNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAH 70
Query: 115 CSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYN 174
+K + ++ N+L++MY +++ A QLF+ M ++++++NS+I G Y
Sbjct: 71 GHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYE 130
Query: 175 EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSL 234
+A++ F ++ ++ D T+ L CG L G +H + L + + N L
Sbjct: 131 QAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLV-VVNGLSQQVFLINVL 189
Query: 235 VDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQE--NVVR 292
+DMY+KCG +++A +F ++ +SWN++I G G E L L A+M ++ N+
Sbjct: 190 IDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTT 249
Query: 293 PDGITFLGVLCACSHGGFVDEGRRY----------FDIMSRDYNVQPTVKHYGCMVDLLG 342
+ L C + GF+++G FDI+ R ++D+
Sbjct: 250 YALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRT-----------ALLDMYA 298
Query: 343 RAGLVEEAYILIKNMPMECNAIVWRSLLA 371
+ G ++EA L MP + N + + ++++
Sbjct: 299 KNGSLKEAIKLFSLMPSK-NVVTYNAMIS 326
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 232/435 (53%), Gaps = 41/435 (9%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G +N + +FDR LWN+MI G+ N +A++ + M+ D+ T +
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN---ETREDSRTLAA 323
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLG------------------------------VENHA 126
++ GLG + GKQ+HC K G VE++
Sbjct: 324 VINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYD 383
Query: 127 HVR-NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
+ NS+I +Y I+ A ++FE + NK L++WNS+ + G E L++F +M +
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHK 443
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS--VSNSLVDMYAKCGA 243
+ D+ + +SAC ++ +L G V + RAT +G + VS+SL+D+Y KCG
Sbjct: 444 LDLPTDEVSLSSVISACASISSLELGEQVFA---RATIVGLDSDQVVSSSLIDLYCKCGF 500
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
VE +F +M + + WN+MI G A++G G EA+ LF +M + RP ITF+ VL
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGI-RPTQITFMVVLT 559
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
AC++ G V+EGR+ F+ M D+ P +H+ CMVDLL RAG VEEA L++ MP + +
Sbjct: 560 ACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDG 619
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
+W S+L C +G + +K + ++ELEP +S YV L+ ++A++G W + R+ M
Sbjct: 620 SMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLM 679
Query: 424 QERGVKKPEPGNSFV 438
+E V K PG+S+
Sbjct: 680 RENNVTK-NPGSSWT 693
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 137/342 (40%), Gaps = 78/342 (22%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++ + + + GF + ++V ++ + +G M A ++FD + + F WNTMI G+
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLL--QMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGY 103
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
N+ + ++ F+ M P+ +S+
Sbjct: 104 MNSGEKGTSLRFFDMM--------PERDGYSW---------------------------- 127
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
N ++ + ++ A +LF M KD+V NS++ + G EAL F +
Sbjct: 128 -----NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL- 181
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCI-------------------------Q 219
D T L AC + AL G+ +H+ I +
Sbjct: 182 --NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 220 RATYLGEITSVSN-----SLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN 274
A+Y+ E + +L+ YA CG V E+ +F + VI WN+MI G ++
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR 316
EAL LF EM N R D T V+ AC GF++ G++
Sbjct: 300 KMEALVLFNEM--RNETREDSRTLAAVINACIGLGFLETGKQ 339
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 13/244 (5%)
Query: 172 KYNEALDFF--TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS 229
KYN + F+ + +Q+ +V L +C + R + + + +L I
Sbjct: 4 KYNSSYRFYLSSSFLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVI 63
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
V+N L+ MY++ G + A +F M +N SWNTMI G + G +L F +M+ E
Sbjct: 64 VANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF-DMMPER 122
Query: 290 VVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEE 349
DG ++ V+ + G + RR F+ M V +G +++ G EE
Sbjct: 123 ----DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN-----GYAEE 173
Query: 350 AYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKH-LLELEPCHSSDYVLLANMYA 408
A L K + +AI ++L AC +K +++ L+ C S L N+YA
Sbjct: 174 ALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYA 233
Query: 409 STGQ 412
G
Sbjct: 234 KCGD 237
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 192/301 (63%), Gaps = 9/301 (2%)
Query: 145 AHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ-SGMRPDDATFVVTLSACG 203
A ++ +++++ WN +I V +Y EAL M+ + ++P+ +F +L+AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 204 AMGALAFGRWVHSC-IQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISW 262
+G L +WVHS I L I +S++LVD+YAKCG + + E+F S+K +V W
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAI--LSSALVDVYAKCGDIGTSREVFYSVKRNDVSIW 234
Query: 263 NTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMS 322
N MI G A+HG TEA+ +F+EM E+V PD ITFLG+L CSH G ++EG+ YF +MS
Sbjct: 235 NAMITGFATHGLATEAIRVFSEMEAEHV-SPDSITFLGLLTTCSHCGLLEEGKEYFGLMS 293
Query: 323 RDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
R +++QP ++HYG MVDLLGRAG V+EAY LI++MP+E + ++WRSLL++ RT+ N +L
Sbjct: 294 RRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELG 353
Query: 383 EKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
E + L S DYVLL+N+Y+ST +W K R M + G++K + G S++ G
Sbjct: 354 EIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAK-GKSWLEFGG 409
Query: 443 I 443
+
Sbjct: 410 M 410
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 2/239 (0%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G+ A V + WN MI G+ Q E+A+ K M + P+ F+F+
Sbjct: 112 GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSF-TDIKPNKFSFAS 170
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
L LG + K +H + G+E +A + ++L+ +Y DI T+ ++F + D
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND 230
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
+ WN++I G EA+ F+ M + PD TF+ L+ C G L G+
Sbjct: 231 VSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG 290
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGN 274
+ R + ++VD+ + G V+EAYE+ SM + +V+ W +++ ++ N
Sbjct: 291 LMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKN 349
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
++H K +H+ + +G N ++ ++ V GD+ + VF V + D +WN M
Sbjct: 181 LHHAKWVHSLMIDSGIELNAILSSALV---DVYAKCGDIGTSREVFYSVKRNDVSIWNAM 237
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQ-LHCSTLK 119
I GF +A+ + M+ HV PD+ TF LL G + GK+ + +
Sbjct: 238 ITGFATHGLATEAIRVFSEMEA--EHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM-LNKDLVAWNSII 164
++ +++ + G ++ A++L E M + D+V W S++
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
N +++ K G A ++ R+ +NVI+WN MI G + EAL ML +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 292 RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLV---E 348
+P+ +F L AC+ G + + +M D ++ +VD+ + G +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMI-DSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 349 EAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSS 398
E + +K + +W +++ THG LA + + E+E H S
Sbjct: 221 EVFYSVKRNDVS----IWNAMITGFATHG---LATEAIRVFSEMEAEHVS 263
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 237/428 (55%), Gaps = 46/428 (10%)
Query: 55 FLWNTMIRGFGNTNQPEKAVLFYKRMQQ-----GEPHVVP--DTFTFSFLLKIVGG--LG 105
FL+N ++R + P A Y ++Q+ +P D+FT+ FLLK
Sbjct: 78 FLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFP 137
Query: 106 SVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIID 165
S++LG LH TLKLG E+H +V+ +L+ MY V ++ AH++F+EM ++ V WN +I
Sbjct: 138 SLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMIT 197
Query: 166 CLVCCGKYNEALDF-------------------------------FTRMVQ-SGMRPDDA 193
L G + +AL F F+RMV ++P++
Sbjct: 198 GLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEI 257
Query: 194 TFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRS 253
T + L A +G L VH+ + + ++ V+NSL+D YAKCG ++ A++ F
Sbjct: 258 TILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIE 317
Query: 254 MKG--KNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFV 311
+ KN++SW TMI A HG G EA+++F +M + ++P+ +T + VL ACSHGG
Sbjct: 318 IPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACSHGGLA 376
Query: 312 DEG-RRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLL 370
+E +F+ M +Y + P VKHYGC+VD+L R G +EEA + +P+E A+VWR LL
Sbjct: 377 EEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Query: 371 AACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKK 430
AC + + +LAE+V + L+ELE H DYVL++N++ TG++ + + R+ M RGV K
Sbjct: 437 GACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAK 496
Query: 431 PEPGNSFV 438
PG+S V
Sbjct: 497 -LPGHSQV 503
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 9/285 (3%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
GD A+ +++ W T+I G+ ++P++A+L + RM + + P+ T
Sbjct: 203 GDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDA-IKPNEITILA 261
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLG-VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN- 154
+L V LG + + +H K G V V NSLI Y I++A + F E+ N
Sbjct: 262 ILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNG 321
Query: 155 -KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSAC--GAMGALAFG 211
K+LV+W ++I G EA+ F M + G++P+ T + L+AC G + F
Sbjct: 322 RKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFL 381
Query: 212 RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMK-GKNVISWNTMILGLA 270
+ ++ + ++ LVDM + G +EEA +I + + + W M+LG
Sbjct: 382 EFFNTMVNEYKITPDVKHY-GCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWR-MLLGAC 439
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGR 315
S + E L E G L C G F+D R
Sbjct: 440 SVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQR 484
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 242/460 (52%), Gaps = 20/460 (4%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
+K ++ + GF ++ +I++ + V G + A +FD + + + + + ++I G
Sbjct: 142 VKRVYGFMMSNGFEPEQYMMNRILL---MHVKCGMIIDARRLFDEIPERNLYSYYSIISG 198
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
F N +A +K M + +T TF+ +L+ GLGS+ +GKQLH LKLGV
Sbjct: 199 FVNFGNYVEAFELFKMMWEELSDC--ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVV 256
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
++ V LI MY DIE A FE M K VAWN++I G EAL M
Sbjct: 257 DNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM 316
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
SG+ D T + + + L + H+ + R + EI + + +LVD Y+K G
Sbjct: 317 RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA-NTALVDFYSKWGR 375
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
V+ A +F + KN+ISWN ++ G A+HG GT+A+ LF +M+ NV P+ +TFL VL
Sbjct: 376 VDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVA-PNHVTFLAVLS 434
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
AC++ G ++G F MS + ++P HY CM++LLGR GL++EA I+ P++
Sbjct: 435 ACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTV 494
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
+W +LL ACR N++L V + L + P +YV++ NMY S G+ E + ++
Sbjct: 495 NMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETL 554
Query: 424 QERG---------VKKPEPGNSFVGLPGIRLE--NETAER 452
+ +G V+ + +SF L G R + NET +R
Sbjct: 555 ESKGLSMMPACTWVEVGDQTHSF--LSGDRFDSYNETVKR 592
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 22/352 (6%)
Query: 50 DKPDAFLWNTMIRGFGNT--NQPEKAVL---FYKRMQQGEPHVVPDTF-----TFSFLLK 99
+ D L +T I G T +Q EK VL F + + E + +F T+ L++
Sbjct: 72 ESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVE 131
Query: 100 IVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVA 159
L S+ K+++ + G E ++ N ++ M+ I A +LF+E+ ++L +
Sbjct: 132 ACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYS 191
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
+ SII V G Y EA + F M + + TF V L A +G++ G+ +H C
Sbjct: 192 YYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVC-- 249
Query: 220 RATYLGEI--TSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTE 277
A LG + T VS L+DMY+KCG +E+A F M K ++WN +I G A HG E
Sbjct: 250 -ALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEE 308
Query: 278 ALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCM 337
AL L +M +++ V D T ++ + ++ ++ + R+ + + +
Sbjct: 309 ALCLLYDM-RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN-GFESEIVANTAL 366
Query: 338 VDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN----VKLAEKV 385
VD + G V+ A + +P + N I W +L+ HG VKL EK+
Sbjct: 367 VDFYSKWGRVDTARYVFDKLPRK-NIISWNALMGGYANHGRGTDAVKLFEKM 417
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 215/433 (49%), Gaps = 41/433 (9%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A+ VF + K AF WN MI G + + E + +K M + E PD +TFS L+
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE--FKPDCYTFSSLMNAC 214
Query: 102 GGLGS-VVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAW 160
S VV G+ +H LK G + +NS++ Y + + A + E + V+W
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 161 NSIIDCLVCCGKYNEALD-------------------------------FFTRMVQSGMR 189
NSIID + G+ +AL+ FF M++SG+
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYE 249
D + L AC + L G+ +H C+ + G V N+LV++YAKCG ++EA
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQG-YAYVGNALVNLYAKCGDIKEADR 393
Query: 250 IFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGG 309
F + K+++SWNTM+ HG +AL L+ M+ ++PD +TF+G+L CSH G
Sbjct: 394 AFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASG-IKPDNVTFIGLLTTCSHSG 452
Query: 310 FVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN----MPMECNAIV 365
V+EG F+ M +DY + V H CM+D+ GR G + EA L + N
Sbjct: 453 LVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSS 512
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
W +LL AC TH + +L +V K L EP +VLL+N+Y STG+W E RR M E
Sbjct: 513 WETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVE 572
Query: 426 RGVKKPEPGNSFV 438
RG+KK PG S++
Sbjct: 573 RGMKKT-PGCSWI 584
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 178/419 (42%), Gaps = 69/419 (16%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
+G + A VFD + + D WNTM+ + ++A+ + +++ + PD ++F+
Sbjct: 17 SGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK--PDDYSFT 74
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFE----- 150
+L LG+V G+++ ++ G V NSLI MYG D +A+++F
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 151 ----------------------------EMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
EM + AWN +I CGK L F
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 183 MVQSGMRPDDATFVVTLSACGAMGA-LAFGRWVH----------------SCIQRATYLG 225
M++S +PD TF ++AC A + + +GR VH S + T LG
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 226 E-------------ITSVS-NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLAS 271
+T VS NS++D K G E+A E+F KN+++W TMI G
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 272 HGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTV 331
+G+G +AL F EM++ V D + VL ACS + G+ + Q
Sbjct: 315 NGDGEQALRFFVEMMKSG-VDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH-CGFQGYA 372
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
+V+L + G ++EA ++ + + + W ++L A HG A K+ +++
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 121/241 (50%), Gaps = 7/241 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G+ A+ VF + + W TMI G+G E+A+ F+ M + V D F +
Sbjct: 285 GETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMK--SGVDSDHFAYGA 342
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
+L GL + GK +H + G + +A+V N+L+++Y DI+ A + F ++ NKD
Sbjct: 343 VLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
LV+WN+++ G ++AL + M+ SG++PD+ TF+ L+ C G + G +
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEI---FRSM--KGKNVISWNTMILGLAS 271
+ + + ++DM+ + G + EA ++ + S+ N SW T++ ++
Sbjct: 463 SMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACST 522
Query: 272 H 272
H
Sbjct: 523 H 523
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
AK G + A ++F M + ++WNTM+ + G EA+ LF + L+ + +PD +F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ-LRFSDAKPDDYSF 73
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+L C+ G V GR+ ++ R ++ ++D+ G+ A + ++M
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRS-GFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC 132
Query: 359 MEC-NAIVWRSLLAA 372
+ N + W SLL A
Sbjct: 133 CDSRNEVTWCSLLFA 147
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 235/439 (53%), Gaps = 10/439 (2%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+N K++H ++G + L VG + + G + + +F + D W +M
Sbjct: 466 LNLGKQVHGYTLKSGLVLD-LTVGSSLF--TLYSKCGSLEESYKLFQGIPFKDNACWASM 522
Query: 61 IRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
I GF +A+ LF + + G PD T + +L + S+ GK++H TL+
Sbjct: 523 ISGFNEYGYLREAIGLFSEMLDDGTS---PDESTLAAVLTVCSSHPSLPRGKEIHGYTLR 579
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G++ + ++L++MY ++ A Q+++ + D V+ +S+I G +
Sbjct: 580 AGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLL 639
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
F MV SG D L A + G VH+ I + E SV +SL+ MY+
Sbjct: 640 FRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTE-PSVGSSLLTMYS 698
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
K G++++ + F + G ++I+W +I A HG EAL ++ +++E +PD +TF+
Sbjct: 699 KFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVY-NLMKEKGFKPDKVTFV 757
Query: 300 GVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
GVL ACSHGG V+E + + M +DY ++P +HY CMVD LGR+G + EA I NM +
Sbjct: 758 GVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHI 817
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKE 419
+ +A+VW +LLAAC+ HG V+L + K +ELEP + Y+ L+N+ A G+W+E+ +
Sbjct: 818 KPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEET 877
Query: 420 RRSMQERGVKKPEPGNSFV 438
R+ M+ GV+K EPG S V
Sbjct: 878 RKLMKGTGVQK-EPGWSSV 895
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 193/392 (49%), Gaps = 23/392 (5%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK-PDAFLWNTMIRGF 64
++HA ++++GF+ + V +I ++ +GD++ + VF+ +D + N MI F
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALI---SMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSF 428
Query: 65 GNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ +P KA+ + RM Q+G + D F+ LL ++ L LGKQ+H TLK G+
Sbjct: 429 SQSKKPGKAIRLFTRMLQEG---LRTDEFSVCSLLSVLDCLN---LGKQVHGYTLKSGLV 482
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
V +SL +Y +E +++LF+ + KD W S+I G EA+ F+ M
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
+ G PD++T L+ C + +L G+ +H RA + + + ++LV+MY+KCG+
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAG-IDKGMDLGSALVNMYSKCGS 601
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
++ A +++ + + +S +++I G + HG + LF +M+ D +L
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM-DSFAISSILK 660
Query: 304 ACSHGGFVDEGRRYFDIMSR-DYNVQPTVKHYGCMVDLLGRAGLVEE---AYILIKNMPM 359
A + G + +++ +P+V ++ + + G +++ A+ I N P
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVG--SSLLTMYSKFGSIDDCCKAFSQI-NGP- 716
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
+ I W +L+A+ HG A +V + E
Sbjct: 717 --DLIAWTALIASYAQHGKANEALQVYNLMKE 746
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 11/284 (3%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVV---PDTF 92
+G M A +FD + +PD N MI G+ E+++ F+ +M H + +
Sbjct: 97 SGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM-----HFLGFEANEI 151
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM 152
++ ++ L + + + + C T+K+G + V ++LI ++ E A+++F +
Sbjct: 152 SYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDS 211
Query: 153 LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGR 212
L+ ++ WN+II + Y D F M +PD T+ L+AC ++ L FG+
Sbjct: 212 LSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
V + + + E V ++VD+YAKCG + EA E+F + +V+SW M+ G
Sbjct: 272 VVQARVIKCG--AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR 316
+ AL +F EM + + V + T V+ AC V E +
Sbjct: 330 NDAFSALEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCEASQ 372
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 161/356 (45%), Gaps = 21/356 (5%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVL-FYKRMQQGEPHVVPDTFTFSFLLKI 100
A VF + + WNT+I G NQ AV + M G PD++T+S +L
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAG-ALRNQNYGAVFDLFHEMCVGFQK--PDSYTYSSVLAA 260
Query: 101 VGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAW 160
L + GK + +K G E+ V +++ +Y + A ++F + N +V+W
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 161 NSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQR 220
++ AL+ F M SG+ ++ T +SACG + VH+ + +
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFK 379
Query: 221 ATYLGEITSVSNSLVDMYAKCGAV---EEAYEIFRSMKGKNVISWNTMILGLASHGNGTE 277
+ + + +SV+ +L+ MY+K G + E+ +E ++ +N++ N MI + +
Sbjct: 380 SGFYLD-SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK 436
Query: 278 ALTLFAEMLQENVVRPDGITFLGVLCA--CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
A+ LF MLQE +R D + +L C + G G + D V +
Sbjct: 437 AIRLFTRMLQEG-LRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS----- 490
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
+ L + G +EE+Y L + +P + NA W S+++ +G ++ A + +L+
Sbjct: 491 -LFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLD 544
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 225/427 (52%), Gaps = 11/427 (2%)
Query: 15 GFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAF---LWNTMIRGFGNTNQPE 71
N ++ K+I +V ++ A +FD V +W M G+ P
Sbjct: 162 SLRHNPKLLSKLITLFSV---CRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPR 218
Query: 72 KAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNS 131
A++ Y M + P F+ S LK L + +G+ +H +K + V N
Sbjct: 219 DALIVYVDMLCS--FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNV 276
Query: 132 LIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPD 191
L+ +Y + A ++F+ M +++V WNS+I L + +E + F +M + +
Sbjct: 277 LLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFS 336
Query: 192 DATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIF 251
AT L AC + AL G+ +H+ I ++ ++ + NSL+DMY KCG VE + +F
Sbjct: 337 WATLTTILPACSRVAALLTGKEIHAQILKSKEKPDV-PLLNSLMDMYGKCGEVEYSRRVF 395
Query: 252 RSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFV 311
M K++ SWN M+ A +GN E + LF M++ V PDGITF+ +L CS G
Sbjct: 396 DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA-PDGITFVALLSGCSDTGLT 454
Query: 312 DEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
+ G F+ M ++ V P ++HY C+VD+LGRAG ++EA +I+ MP + +A +W SLL
Sbjct: 455 EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Query: 372 ACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKP 431
+CR HGNV + E K L LEP + +YV+++N+YA W+ + K R M++RGVKK
Sbjct: 515 SCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKK- 573
Query: 432 EPGNSFV 438
E G S+V
Sbjct: 574 EAGCSWV 580
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 6/269 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
IHA+I + + +V V + + +G + A VFD + + + WN++I
Sbjct: 258 IHAQIVKRKEKVDQVVYN---VLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSK 314
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
+ + +++MQ E + T + +L + +++ GK++H LK +
Sbjct: 315 KVRVHEMFNLFRKMQ--EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDV 372
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
+ NSL+ MYG ++E + ++F+ ML KDL +WN +++C G E ++ F M++S
Sbjct: 373 PLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIES 432
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
G+ PD TFV LS C G +G + ++ + LVD+ + G ++E
Sbjct: 433 GVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKE 492
Query: 247 AYEIFRSMKGKNVIS-WNTMILGLASHGN 274
A ++ +M K S W +++ HGN
Sbjct: 493 AVKVIETMPFKPSASIWGSLLNSCRLHGN 521
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 245/487 (50%), Gaps = 65/487 (13%)
Query: 5 KEIHARIYQTGFHQ------NHLV-----VGKIIVFCAV------------------SVP 35
K IH + TGF + NHL+ GK I C V V
Sbjct: 66 KWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK 125
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
+G + A VFD + + D WNTM+ G+ +A+ FYK ++ + + F+F+
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS--GIKFNEFSFA 183
Query: 96 FLLK-------------------IVGGLGSVVLGKQLHCSTLKLGVENHA---------- 126
LL + G L +VVL + + K G A
Sbjct: 184 GLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK 243
Query: 127 --HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
H+ +LI Y + D+E A +LF EM K+ V+W ++I V G N ALD F +M+
Sbjct: 244 DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
G++P+ TF L A ++ +L G+ +H + R +S SL+DMY+K G++
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS-SLIDMYSKSGSL 362
Query: 245 EEAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
E + +FR K + + WNTMI LA HG G +AL + +M++ V +P+ T + +L
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV-QPNRTTLVVILN 421
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
ACSH G V+EG R+F+ M+ + + P +HY C++DLLGRAG +E I+ MP E +
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK 481
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
+W ++L CR HGN +L +K L++L+P S+ Y+LL+++YA G+W + K R M
Sbjct: 482 HIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVM 541
Query: 424 QERGVKK 430
++R V K
Sbjct: 542 KKRRVNK 548
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 52/300 (17%)
Query: 171 GKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV 230
+ ++A+ + Q G+R L CG +L G+W+H ++ + T +
Sbjct: 25 AELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLL 84
Query: 231 SNSLVDMYAKCGAVEEAYE-------------------------------IFRSMKGKNV 259
SN L+ MY KCG +A + +F SM ++V
Sbjct: 85 SNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDV 144
Query: 260 ISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFD 319
+SWNTM++G A GN EAL + E + + ++ + +F G+L AC +
Sbjct: 145 VSWNTMVIGYAQDGNLHEALWFYKE-FRRSGIKFNEFSFAGLLTACVKSRQLQ------- 196
Query: 320 IMSRDYNVQPTVKHY------GC-MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAA 372
++R + Q V + C ++D + G +E A M ++ + +W +L++
Sbjct: 197 -LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHIWTTLISG 254
Query: 373 CRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPE 432
G+++ AEK+ + E P + L Y G N R M GV KPE
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPV---SWTALIAGYVRQGSGNRALDLFRKMIALGV-KPE 310
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 230/438 (52%), Gaps = 11/438 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
KEIH + + GF + V ++ + A VF ++ + WN+MI+G+
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYG---KCDCLEVAREVFQKMPRKSLVAWNSMIKGY 284
Query: 65 GNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ V RM +G P T + +L +++ GK +H ++ V
Sbjct: 285 VAKGDSKSCVEILNRMIIEGTR---PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+V SLI +Y + A +F + +WN +I + G + +A++ + +M
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
V G++PD TF L AC + AL G+ +H I + + +S +L+DMY+KCG
Sbjct: 402 VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS-ALLDMYSKCGN 460
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+EA+ IF S+ K+V+SW MI SHG EAL F EM Q+ ++PDG+T L VL
Sbjct: 461 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM-QKFGLKPDGVTLLAVLS 519
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC-N 362
AC H G +DEG ++F M Y ++P ++HY CM+D+LGRAG + EAY +I+ P N
Sbjct: 520 ACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDN 579
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
A + +L +AC H L +++ + L+E P +S Y++L N+YAS W+ + R
Sbjct: 580 AELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLK 639
Query: 423 MQERGVKKPEPGNSFVGL 440
M+E G++K +PG S++ +
Sbjct: 640 MKEMGLRK-KPGCSWIEM 656
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 165/319 (51%), Gaps = 15/319 (4%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVD-KPDAFLWNT 59
+ +K +H RI G ++ ++ +I V D A VF+ D + D ++WN+
Sbjct: 20 LRRIKLVHQRILTLGLRRDVVLCKSLI---NVYFTCKDHCSARHVFENFDIRSDVYIWNS 76
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
++ G+ + + +KR+ VPD+FTF ++K G LG LG+ +H +K
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSI-CVPDSFTFPNVIKAYGALGREFLGRMIHTLVVK 135
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G V +SL+ MY E + Q+F+EM +D+ +WN++I C G+ +AL+
Sbjct: 136 SGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALEL 195
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH-SCIQRATYLGEITSVSNSLVDMY 238
F RM SG P+ + V +SAC + L G+ +H C+++ L E V+++LVDMY
Sbjct: 196 FGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY--VNSALVDMY 253
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
KC +E A E+F+ M K++++WN+MI G + G+ + + M+ E RP T
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG-TRPSQTTL 312
Query: 299 LGVLCACS------HGGFV 311
+L ACS HG F+
Sbjct: 313 TSILMACSRSRNLLHGKFI 331
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 189/378 (50%), Gaps = 13/378 (3%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
IH + ++G+ + +V ++ + ++ VFD + + D WNT+I F
Sbjct: 129 IHTLVVKSGYVCDVVVASSLV---GMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 67 TNQPEKAVLFYKRMQQG--EPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ + EKA+ + RM+ EP+ V T S +++ + GK++H +K G E
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW----LERGKEIHRKCVKKGFEL 241
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+V ++L+ MYG +E A ++F++M K LVAWNS+I V G ++ RM+
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
G RP T L AC L G+++H + R+ +I V+ SL+D+Y KCG
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY-VNCSLIDLYFKCGEA 360
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
A +F + SWN MI S GN +A+ ++ +M+ V+PD +TF VL A
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG-VKPDVVTFTSVLPA 419
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CS +++G++ +S + ++ ++D+ + G +EA+ + ++P + + +
Sbjct: 420 CSQLAALEKGKQIHLSIS-ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK-DVV 477
Query: 365 VWRSLLAACRTHGNVKLA 382
W +++A +HG + A
Sbjct: 478 SWTVMISAYGSHGQPREA 495
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 247/506 (48%), Gaps = 77/506 (15%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
L+ +HA+I + G + V +V C+ + + D Y++S+F ++ + F+ N +IRG
Sbjct: 45 LRHVHAQILRRGVLSSR--VAAQLVSCSSLLKSPD--YSLSIFRNSEERNPFVLNALIRG 100
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ E +V + M + V PD TF F+LK LG LG+ LH +TLK V+
Sbjct: 101 LTENARFESSVRHFILMLR--LGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVD 158
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEE-------------------------------- 151
+ VR SL+ MY ++ A Q+FEE
Sbjct: 159 CDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTL 218
Query: 152 ---MLNKDLVAWNSIIDCLVCCGKYNEALDFFT--------------------------- 181
M ++ +W+++I V G+ N A F
Sbjct: 219 FRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAI 278
Query: 182 ----RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCI-QRATYLGEITSVSNSLVD 236
M++ G++P++ T LSAC GAL G +H I L ++ +LVD
Sbjct: 279 STYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDR--AIGTALVD 336
Query: 237 MYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGI 296
MYAKCG ++ A +F +M K+++SW MI G A HG +A+ F +M+ +PD +
Sbjct: 337 MYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG-EKPDEV 395
Query: 297 TFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
FL VL AC + VD G +FD M DY ++PT+KHY +VDLLGRAG + EA+ L++N
Sbjct: 396 VFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVEN 455
Query: 357 MPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEM 416
MP+ + W +L AC+ H + AE V ++LLEL+P Y+ L +AS G ++
Sbjct: 456 MPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDV 515
Query: 417 SKERRSMQERGVKKPEPGNSFVGLPG 442
K R S+Q+R +K+ G S++ L G
Sbjct: 516 EKRRLSLQKR-IKERSLGWSYIELDG 540
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 208/395 (52%), Gaps = 14/395 (3%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A +FD + + + WN I +P +A+ + ++ + H P++ TF L
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH--PNSITFCAFLNAC 219
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWN 161
+ LG QLH L+ G + V N LI YG K I ++ +F EM K+ V+W
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 162 SIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS----- 216
S++ V + +A + R + + D LSAC M L GR +H+
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
C++R ++G ++LVDMY KCG +E++ + F M KN+++ N++I G A G
Sbjct: 340 CVERTIFVG------SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVD 393
Query: 277 EALTLFAEMLQENV-VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
AL LF EM P+ +TF+ +L ACS G V+ G + FD M Y ++P +HY
Sbjct: 394 MALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYS 453
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPC 395
C+VD+LGRAG+VE AY IK MP++ VW +L ACR HG +L ++L +L+P
Sbjct: 454 CIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPK 513
Query: 396 HSSDYVLLANMYASTGQWNEMSKERRSMQERGVKK 430
S ++VLL+N +A+ G+W E + R ++ G+KK
Sbjct: 514 DSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 169/386 (43%), Gaps = 21/386 (5%)
Query: 11 IYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDA-------------FLW 57
I + +V +I+ P NY ++++ ++D P++ W
Sbjct: 17 ISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSW 76
Query: 58 NTMIRGFGNTNQPEKAVL-FYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
++I G A++ F++ ++G VVP+ FTF K V L V GKQ+H
Sbjct: 77 TSLISGLAQNGHFSTALVEFFEMRREG---VVPNDFTFPCAFKAVASLRLPVTGKQIHAL 133
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
+K G V S MY + + A +LF+E+ ++L WN+ I V G+ EA
Sbjct: 134 AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREA 193
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
++ F + P+ TF L+AC L G +H + R+ + ++ SV N L+D
Sbjct: 194 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV-SVCNGLID 252
Query: 237 MYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGI 296
Y KC + + IF M KN +SW +++ + +A L+ ++++V
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS-RKDIVETSDF 311
Query: 297 TFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
VL AC+ ++ GR + V+ T+ +VD+ G+ G +E++
Sbjct: 312 MISSVLSACAGMAGLELGRS-IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 357 MPMECNAIVWRSLLAACRTHGNVKLA 382
MP E N + SL+ G V +A
Sbjct: 371 MP-EKNLVTRNSLIGGYAHQGQVDMA 395
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 240/436 (55%), Gaps = 8/436 (1%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K+ H + G + V ++ ++ G+ A+ V D + D ++++ + G+
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGE---AIRVLDDLPYCDLSVFSSALSGY 212
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
++ + ++ + V + T+ L++ L + L Q+H ++ G
Sbjct: 213 LECGAFKEGLDVLRKTANED--FVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+LI+MYG + A ++F++ +++ +I+D + EAL+ F++M
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+ P++ TF + L++ + L G +H + ++ Y + V N+LV+MYAK G++
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVM-VGNALVNMYAKSGSI 389
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
E+A + F M +++++WNTMI G + HG G EAL F M+ + P+ ITF+GVL A
Sbjct: 390 EDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRITFIGVLQA 448
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CSH GFV++G YF+ + + ++VQP ++HY C+V LL +AG+ ++A ++ P+E + +
Sbjct: 449 CSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVV 508
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
WR+LL AC N +L +KV ++ +E P S YVLL+N++A + +W ++K R M
Sbjct: 509 AWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMN 568
Query: 425 ERGVKKPEPGNSFVGL 440
RGVKK EPG S++G+
Sbjct: 569 NRGVKK-EPGVSWIGI 583
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 155/337 (45%), Gaps = 7/337 (2%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTFSFLLKI 100
A +FD + + + W M++G+ N+ + + +K M GE P+ F + + K
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESR--PNEFVATVVFKS 145
Query: 101 VGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAW 160
G + GKQ H LK G+ +H VRN+L++MY + A ++ +++ DL +
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVF 205
Query: 161 NSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQR 220
+S + + CG + E LD + ++ T++ +L + L VHS + R
Sbjct: 206 SSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR 265
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALT 280
+ E+ + +L++MY KCG V A +F +N+ T++ + EAL
Sbjct: 266 FGFNAEVEACG-ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALN 324
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDL 340
LF++M V P+ TF +L + + + +G ++ + + V +V++
Sbjct: 325 LFSKM-DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS-GYRNHVMVGNALVNM 382
Query: 341 LGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
++G +E+A M + + W ++++ C HG
Sbjct: 383 YAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 7/255 (2%)
Query: 97 LLKIVGGLGSVVLGKQLHCS---TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
LLK+ + +G+ +H T + A+ NSLI++Y ++ A +LF+ M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSG-MRPDDATFVVTLSACGAMGALAFGR 212
+++V+W +++ G E L F M SG RP++ V +C G + G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
H C + + V N+LV MY+ C EA + + ++ +++ + G
Sbjct: 157 QFHGCFLKYGLISH-EFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
G E L + + E+ V + +T+L L S+ ++ + M R + V+
Sbjct: 216 GAFKEGLDVLRKTANEDFVW-NNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAEVE 273
Query: 333 HYGCMVDLLGRAGLV 347
G ++++ G+ G V
Sbjct: 274 ACGALINMYGKCGKV 288
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 235/438 (53%), Gaps = 14/438 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVD---KPDAFLWNTMI 61
K++H + ++G + + +I + G + YA VF + +WN+M+
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYS---NCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
GF + E A+ ++ Q + + D++T S LKI ++ LG Q+H + G
Sbjct: 315 SGFLINEENEAALWLLLQIYQSD--LCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSG 372
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
E V + L+ ++ + +I+ AH+LF + NKD++A++ +I V G + A F
Sbjct: 373 YELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFR 432
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAK 240
+++ G+ D L C ++ +L +G+ +H CI++ +T+ +LVDMY K
Sbjct: 433 ELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--TALVDMYVK 490
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG ++ +F M ++V+SW +I+G +G EA F +M+ + P+ +TFLG
Sbjct: 491 CGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGI-EPNKVTFLG 549
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
+L AC H G ++E R + M +Y ++P ++HY C+VDLLG+AGL +EA LI MP+E
Sbjct: 550 LLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLE 609
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKER 420
+ +W SLL AC TH N L + + LL+ P S Y L+N YA+ G W+++SK R
Sbjct: 610 PDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVR 669
Query: 421 RSMQERGVKKPEPGNSFV 438
+ ++ G K E G S++
Sbjct: 670 EAAKKLGAK--ESGMSWI 685
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 182/422 (43%), Gaps = 43/422 (10%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+ I A + + G QN + +I ++ V ++ A VFD + + + W TM+ G+
Sbjct: 25 ESIQAHVIKQGISQNVFIANNVI---SMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGY 81
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ +P KA+ Y+RM E + F +S +LK G +G + LG ++ K +
Sbjct: 82 TSDGKPNKAIELYRRMLDSEEEA-ANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRG 140
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ NS++ MY + A+ F+E+L +WN++I G +EA+ F RM
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 185 Q------------------------------SGMRPDDATFVVTLSACGAMGALAFGRWV 214
Q G+ D L AC G L G+ +
Sbjct: 201 QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQL 260
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMK---GKNVISWNTMILGLAS 271
H C+ ++ ++S +L+DMY+ CG++ A ++F K +V WN+M+ G
Sbjct: 261 HCCVVKSGLESSPFAIS-ALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLI 319
Query: 272 HGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFD-IMSRDYNVQPT 330
+ AL L ++ Q ++ D T G L C + + G + ++ Y +
Sbjct: 320 NEENEAALWLLLQIYQSDLCF-DSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
V +VDL G +++A+ L +P + + I + L+ C G LA + + L+
Sbjct: 379 VG--SILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 391 EL 392
+L
Sbjct: 436 KL 437
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 13/216 (6%)
Query: 110 GKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVC 169
G+ + +K G+ + + N++I MY + + AH++F+EM +++V W +++
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 170 CGKYNEALDFFTRMVQSGMR-PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEIT 228
GK N+A++ + RM+ S ++ + L ACG +G + G V+ I + G++
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 229 SVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQE 288
+ NS+VDMY K G + EA F+ + + SWNT+I G G EA+TLF M Q
Sbjct: 144 -LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQP 202
Query: 289 NVVRPDGITFLGVLCACSHGGFVDEGR-RYFDIMSR 323
NVV + C GFVD+G R + + R
Sbjct: 203 NVVSWN----------CLISGFVDKGSPRALEFLVR 228
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 188 MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEA 247
M D L CG + A G + + + + + + ++N+++ MY + +A
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQG-ISQNVFIANNVISMYVDFRLLSDA 59
Query: 248 YEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSH 307
+++F M +N+++W TM+ G S G +A+ L+ ML + + VL AC
Sbjct: 60 HKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGL 119
Query: 308 GG------------------------------FVDEGRRYFDIMSRDYNVQPTVKHYGCM 337
G +V GR S ++P+ + +
Sbjct: 120 VGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTL 179
Query: 338 VDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAE 383
+ +AGL++EA L MP + N + W L++ G+ + E
Sbjct: 180 ISGYCKAGLMDEAVTLFHRMP-QPNVVSWNCLISGFVDKGSPRALE 224
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 224/425 (52%), Gaps = 7/425 (1%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+H + + GF N L + ++ C A AV++F + + D W+T+I +
Sbjct: 185 VHGFVIRRGF-SNDLSLVNSLLNCYAKSRA--FKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
+A+L + M P+ T +L+ + G++ H ++ G+E
Sbjct: 242 NGAAAEALLVFNDMMDDGTE--PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV 299
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV-Q 185
V +L+ MY E A+ +F + KD+V+W ++I G + +++ F+ M+ +
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
+ RPD V L +C +G L + HS + + + + SLV++Y++CG++
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSN-PFIGASLVELYSRCGSLG 418
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
A ++F + K+ + W ++I G HG GT+AL F M++ + V+P+ +TFL +L AC
Sbjct: 419 NASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSAC 478
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
SH G + EG R F +M DY + P ++HY +VDLLGR G ++ A + K MP +
Sbjct: 479 SHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQI 538
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
+LL ACR H N ++AE V K L ELE H+ Y+L++N+Y G+W + K R S+++
Sbjct: 539 LGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQ 598
Query: 426 RGVKK 430
RG+KK
Sbjct: 599 RGIKK 603
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 206/411 (50%), Gaps = 8/411 (1%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+N+ + IH + + + L VG +++ + + G M A+ +FD ++KPD W++M
Sbjct: 76 VNYGEMIHGFVKKDVTLGSDLYVGSSLIY--MYIKCGRMIEALRMFDELEKPDIVTWSSM 133
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
+ GF P +AV F++RM V PD T L+ L + LG+ +H ++
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMA-SDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
G N + NSL++ Y + + A LF+ + KD+++W+++I C V G EAL F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
M+ G P+ AT + L AC A L GR H R E+ VS +LVDMY K
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV-KVSTALVDMYMK 311
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
C + EEAY +F + K+V+SW +I G +G ++ F+ ML EN RPD I +
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 301 VLCACSHGGFVDEGRRYFD-IMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
VL +CS GF+++ + + ++ ++ P + +V+L R G + A + + +
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--ASLVELYSRCGSLGNASKVFNGIAL 429
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYAST 410
+ + +VW SL+ HG A + H+++ ++ L+ + A +
Sbjct: 430 K-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 175/338 (51%), Gaps = 8/338 (2%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A +F + K + WNT+++ Q E+ + + M + E PD FT LK
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEK--PDNFTLPVALKAC 70
Query: 102 GGLGSVVLGKQLHCSTLK-LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAW 160
G L V G+ +H K + + + +V +SLI+MY + A ++F+E+ D+V W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 161 NSIIDCLVCCGKYNEALDFFTRMVQ-SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
+S++ G +A++FF RMV S + PD T + +SAC + GR VH +
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
R + ++ S+ NSL++ YAK A +EA +F+ + K+VISW+T+I +G EAL
Sbjct: 191 RRGFSNDL-SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
+F +M+ + P+ T L VL AC+ +++GR+ ++ R ++ VK +VD
Sbjct: 250 LVFNDMMDDG-TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVD 307
Query: 340 LLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
+ + EEAY + +P + + + W +L++ +G
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNG 344
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 238/479 (49%), Gaps = 77/479 (16%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
GD+ A +F + + + W MI GF +A++ + M++ V P+ T
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 97 LLKIVGGLGSVV--LGKQLHCSTLKLGVENHAH---VRNSLIHMY---GVMK-------- 140
L GGLG LG+QLH + G E H + SL+HMY G++
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 141 ------------------DIETAHQLFEEMLN-KDLVAWNSIIDCLVCCGKYNEALDFFT 181
D+E A LFE + + D V+W S+ID + G + A F
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 182 R-------------------------------MVQSGMRPDDATFVVTLSACGAMGALAF 210
+ MV+ G++P ++T+ V LS+ GA L
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 211 GRWVHSCIQRAT--YLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
G+ +H I + T Y ++ + NSLV MYAKCGA+E+AYEIF M K+ +SWN+MI+G
Sbjct: 485 GKHIHCVIAKTTACYDPDLI-LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMG 543
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
L+ HG +AL LF EML +P+ +TFLGVL ACSH G + G F M Y++Q
Sbjct: 544 LSHHGLADKALNLFKEMLDSG-KKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQ 602
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAAC----RTHGNVKLAEK 384
P + HY M+DLLGRAG ++EA I +P + V+ +LL C R +AE+
Sbjct: 603 PGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAER 662
Query: 385 VRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKE-RRSMQERGVKKPEPGNSFVGLPG 442
LLEL+P ++ +V L N+YA G+ ++M KE R+ M +GVKK PG S+V + G
Sbjct: 663 AAMRLLELDPVNAPGHVALCNVYAGLGR-HDMEKEMRKEMGIKGVKKT-PGCSWVVVNG 719
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 6/224 (2%)
Query: 34 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF-GNTNQPEKAVLFYKRMQQGEPHVVPDTF 92
+ AGD++ A +F ++ D W MI G N E A L ++ G + P
Sbjct: 411 LEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG---LKPLNS 467
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGV--ENHAHVRNSLIHMYGVMKDIETAHQLFE 150
T+S LL G ++ GK +HC K + ++NSL+ MY IE A+++F
Sbjct: 468 TYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFA 527
Query: 151 EMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAF 210
+M+ KD V+WNS+I L G ++AL+ F M+ SG +P+ TF+ LSAC G +
Sbjct: 528 KMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITR 587
Query: 211 GRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM 254
G + ++ + S++D+ + G ++EA E ++
Sbjct: 588 GLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL 631
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 162/420 (38%), Gaps = 84/420 (20%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
AV +FD + + + WNT++ G EKA + M D +++ ++K
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS------RDVVSWNAMIK-- 208
Query: 102 GGLGSVVLGKQLHCSTLKLG--VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVA 159
+ + + L G E + S+++ Y D+ A++LF EM +++V+
Sbjct: 209 ----GYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVS 264
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQ--SGMRPDDATFVVTLSACGAMGALAF------- 210
W ++I Y EAL F M + + P+ T + ACG +G + F
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG-VEFRRLGEQL 323
Query: 211 ---------------GRWVHSCIQRATYLGEITSVS------------NSLVDMYAKCGA 243
GR S + G I S N +++ Y K G
Sbjct: 324 HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGD 383
Query: 244 VEEAYEIFRSMKG-KNVISWNTMILGLASHGNGTEALTLF-------------------- 282
+E A +F +K + +SW +MI G G+ + A LF
Sbjct: 384 LERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQ 443
Query: 283 -------AEMLQENV---VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNV-QPTV 331
A +L + V ++P T+ +L + +D+G+ ++++ P +
Sbjct: 444 NELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDL 503
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
+V + + G +E+AY + M ++ + + W S++ HG A + K +L+
Sbjct: 504 ILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLD 562
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 22/261 (8%)
Query: 105 GSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSII 164
G +V + L + G N SL+ Y ++ A LFE M +++V N+++
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 165 DCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYL 224
V C + NEA F M ++ + ++ V L+A G ++ +
Sbjct: 116 TGYVKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCDDGR------SEDAVELFDEM 164
Query: 225 GEITSVS-NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
E VS N+LV + G +E+A ++F +M ++V+SWN MI G + EA LF
Sbjct: 165 PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFG 224
Query: 284 EMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
+M ++NVV T+ ++ G V E R F M + + + M+
Sbjct: 225 DMSEKNVV-----TWTSMVYGYCRYGDVREAYRLFCEMP-----ERNIVSWTAMISGFAW 274
Query: 344 AGLVEEAYILIKNMPMECNAI 364
L EA +L M + +A+
Sbjct: 275 NELYREALMLFLEMKKDVDAV 295
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 224/427 (52%), Gaps = 20/427 (4%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+H + + GF ++ +V + F D+ A VF + + +A W ++ +
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYG---KCKDLFSARKVFGEMPERNAVSWTALVVAYVK 188
Query: 67 TNQPEKAVLFYKRMQQ---GEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ + E+A + M + G + + D S G +V K+L K +
Sbjct: 189 SGELEEAKSMFDLMPERNLGSWNALVDGLVKS---------GDLVNAKKLFDEMPKRDII 239
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
++ S+I Y D+ +A LFEE D+ AW+++I G+ NEA F+ M
Sbjct: 240 SY----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
++PD+ V +SAC MG V S + + V +L+DM AKCG
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH 355
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
++ A ++F M ++++S+ +M+ G+A HG G+EA+ LF +M+ E +V PD + F +L
Sbjct: 356 MDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIV-PDEVAFTVILK 414
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
C V+EG RYF++M + Y++ + HY C+V+LL R G ++EAY LIK+MP E +A
Sbjct: 415 VCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHA 474
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
W SLL C HGN ++AE V +HL ELEP + YVLL+N+YA+ +W +++ R M
Sbjct: 475 SAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKM 534
Query: 424 QERGVKK 430
E G+ K
Sbjct: 535 NENGITK 541
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 190/387 (49%), Gaps = 18/387 (4%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
HL +IHARI + G Q+ ++ I + S + ++Y+ SVF+RV P +LWN +I+
Sbjct: 25 HLNQIHARIIRKGLEQDQNLISIFIS--SSSSSSSSLSYSSSVFERVPSPGTYLWNHLIK 82
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G+ N + V RM + PD +TF ++K+ G V +G +H L++G
Sbjct: 83 GYSNKFLFFETVSILMRMMR-TGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGF 141
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ V S + YG KD+ +A ++F EM ++ V+W +++ V G+ EA F
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDL 201
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
M + + ++ + G L + + + + +I S + S++D YAK G
Sbjct: 202 MPERNL----GSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIISYT-SMIDGYAKGG 252
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ A ++F +G +V +W+ +ILG A +G EA +F+EM +N V+PD +G++
Sbjct: 253 DMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN-VKPDEFIMVGLM 311
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
ACS G + + + + N + ++D+ + G ++ A L + MP +
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR-D 370
Query: 363 AIVWRSLLAACRTHG----NVKLAEKV 385
+ + S++ HG ++L EK+
Sbjct: 371 LVSYCSMMEGMAIHGCGSEAIRLFEKM 397
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 216/406 (53%), Gaps = 44/406 (10%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G M A +VF + D+ WN++I G Q +A +++M D +++
Sbjct: 324 GYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG------KDMVSWTD 377
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
++K G G +I +LF M KD
Sbjct: 378 MIKGFSGKG-----------------------------------EISKCVELFGMMPEKD 402
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
+ W ++I V G Y EAL +F +M+Q + P+ TF LSA ++ L G +H
Sbjct: 403 NITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHG 462
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
+ + + ++ SV NSLV MY KCG +AY+IF + N++S+NTMI G + +G G
Sbjct: 463 RVVKMNIVNDL-SVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGK 521
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
+AL LF+ ML+ + P+G+TFL +L AC H G+VD G +YF M YN++P HY C
Sbjct: 522 KALKLFS-MLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYAC 580
Query: 337 MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCH 396
MVDLLGR+GL+++A LI MP + ++ VW SLL+A +TH V LAE K L+ELEP
Sbjct: 581 MVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDS 640
Query: 397 SSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
++ YV+L+ +Y+ G+ + + + + +KK +PG+S++ L G
Sbjct: 641 ATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKK-DPGSSWIILKG 685
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 166/387 (42%), Gaps = 26/387 (6%)
Query: 38 DMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFL 97
D+ A +F + + +A + TMI GF + ++A Y P D+ + L
Sbjct: 128 DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE----TPVKFRDSVASNVL 183
Query: 98 LKIVGGLGSVVLGKQLHCSTLKLGVENHAHVR-NSLIHMYGVMKDIETAHQLFEEMLNKD 156
L G + GK + G+ V +S++H Y M I A LF+ M ++
Sbjct: 184 LS-----GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERN 238
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSG-MRPDDATFVVTLSACGAMGALAFGRWVH 215
++ W ++ID G + + F RM Q G ++ + T V AC G +H
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH 298
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
+ R ++ + NSL+ MY+K G + EA +F MK K+ +SWN++I GL
Sbjct: 299 GLVSRMPLEFDLF-LGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQI 357
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
+EA LF +M + D +++ ++ S G + + F +M N+ T
Sbjct: 358 SEAYELFEKMPGK-----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTA---- 408
Query: 336 CMVDLLGRAGLVEEAYILIKNMPME--C-NAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
M+ G EEA M + C N+ + S+L+A + ++ ++ ++++
Sbjct: 409 -MISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Query: 393 EPCHS-SDYVLLANMYASTGQWNEMSK 418
+ S L +MY G N+ K
Sbjct: 468 NIVNDLSVQNSLVSMYCKCGNTNDAYK 494
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 41/273 (15%)
Query: 131 SLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLV---C-CGKYNEAL--------- 177
++I Y + A Q+F+EM + ++N++I ++ C GK E
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV 145
Query: 178 ---DFFTRMVQSGMRPDDATFVVT----------LSACGAMGALAFGRWVHSC-IQRATY 223
T V++G R D+A F+ S G L G+W + + +
Sbjct: 146 SYATMITGFVRAG-RFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMA 204
Query: 224 LGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
+ E+ S S S+V Y K G + +A +F M +NVI+W MI G G + LF
Sbjct: 205 VKEVVSCS-SMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 284 EMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR-----DYNVQPTVKHYGCMV 338
M QE V+ + T + AC EG + ++SR D + ++ M
Sbjct: 264 RMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS---MY 320
Query: 339 DLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
LG G + + ++KN +++ W SL+
Sbjct: 321 SKLGYMGEAKAVFGVMKNK----DSVSWNSLIT 349
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 203/382 (53%), Gaps = 4/382 (1%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
WN + G T A+ RM+ + P LK +G++ LGK++H
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG--LKACSLIGAIRLGKEIHGL 305
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
+ + +VRN+LI MY KD+ A +F + L WNSII K EA
Sbjct: 306 AIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEA 365
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
M+ +G +P+ T L C + L G+ H I R + T + NSLVD
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425
Query: 237 MYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGI 296
+YAK G + A ++ M ++ +++ ++I G + G G AL LF EM + + +PD +
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI-KPDHV 484
Query: 297 TFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
T + VL ACSH V EG R F M +Y ++P ++H+ CMVDL GRAG + +A +I N
Sbjct: 485 TVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHN 544
Query: 357 MPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEM 416
MP + + W +LL AC HGN ++ + + LLE++P + YVL+ANMYA+ G W+++
Sbjct: 545 MPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKL 604
Query: 417 SKERRSMQERGVKKPEPGNSFV 438
++ R M++ GVKK +PG +++
Sbjct: 605 AEVRTIMRDLGVKK-DPGCAWI 625
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 170/380 (44%), Gaps = 42/380 (11%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++HA +G + ++V K++ F + N A S+ + D WN +I +
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSA---FNLHNEAQSIIENSDILHPLPWNVLIASYA 120
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
E+ + YKRM + PD FT+ +LK G V G+ +H S ++
Sbjct: 121 KNELFEEVIAAYKRMVS--KGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSS 178
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
+V N+LI MY +++ A +LF+ M +D V+WN++I+C G ++EA + F +M
Sbjct: 179 LYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWF 238
Query: 186 SG------------------------------MRP-----DDATFVVTLSACGAMGALAF 210
SG MR D ++ L AC +GA+
Sbjct: 239 SGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRL 298
Query: 211 GRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLA 270
G+ +H ++Y G I +V N+L+ MY+KC + A +FR + ++ +WN++I G A
Sbjct: 299 GKEIHGLAIHSSYDG-IDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYA 357
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT 330
EA L EML +P+ IT +L C+ + G+ + + R +
Sbjct: 358 QLNKSEEASHLLREMLVAG-FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDY 416
Query: 331 VKHYGCMVDLLGRAGLVEEA 350
+ +VD+ ++G + A
Sbjct: 417 TMLWNSLVDVYAKSGKIVAA 436
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 110 GKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLV---AWNSIIDC 166
G Q+H + GVE H+ + L+ Y A + E N D++ WN +I
Sbjct: 62 GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIE---NSDILHPLPWNVLIAS 118
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
+ E + + RMV G+RPD T+ L ACG +AFGR VH I+ ++Y
Sbjct: 119 YAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSS 178
Query: 227 ITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEM 285
+ V N+L+ MY + + A +F M ++ +SWN +I AS G +EA LF +M
Sbjct: 179 LY-VCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 204/403 (50%), Gaps = 46/403 (11%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
GD+ A +FD++ D WNTMI G+ + ++ E A + M +
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD------------ 342
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
AH N ++ Y + ++E A FE+ K
Sbjct: 343 -----------------------------AHSWNMMVSGYASVGNVELARHYFEKTPEKH 373
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
V+WNSII Y EA+D F RM G +PD T LSA + L G +H
Sbjct: 374 TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQ 433
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGNG 275
+ + T + ++ V N+L+ MY++CG + E+ IF MK K VI+WN MI G A HGN
Sbjct: 434 IVVK-TVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNA 491
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
+EAL LF M + N + P ITF+ VL AC+H G VDE + F M Y ++P ++HY
Sbjct: 492 SEALNLFGSM-KSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYS 550
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPC 395
+V++ G EEA +I +MP E + VW +LL ACR + NV LA + + LEP
Sbjct: 551 SLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPE 610
Query: 396 HSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
S+ YVLL NMYA G W+E S+ R +M+ + +KK E G+S+V
Sbjct: 611 SSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKK-ERGSSWV 652
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 231 SNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
+N ++ + G + EA +IF ++ +N ++WNTMI G +A LF M + +V
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 291 VRPDGITFLGVLCACSHGGFVDEGRRYFDIM-SRDYNVQPTVKHYGCMVDLLGRAGLVEE 349
V + T + +C F++E R+ FD M SRD + M+ + + E
Sbjct: 103 VTWN--TMISGYVSCGGIRFLEEARKLFDEMPSRD------SFSWNTMISGYAKNRRIGE 154
Query: 350 AYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
A +L + MP E NA+ W +++ +G V A
Sbjct: 155 ALLLFEKMP-ERNAVSWSAMITGFCQNGEVDSA 186
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 177/455 (38%), Gaps = 90/455 (19%)
Query: 34 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
+ +G + A +F++++ + WNTMI G+ + +A + M + D T
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPK------RDVVT 104
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVE---NHAHVRNSLIHMYGVMKDIETAHQLFE 150
++ ++ G + ++ KL E + N++I Y + I A LFE
Sbjct: 105 WNTMISGYVSCGGIRFLEEAR----KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 151 EMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRP--------------DDATFV 196
+M ++ V+W+++I G+ + A+ F +M P +A +V
Sbjct: 161 KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV 220
Query: 197 VTLSACGAMGALAFGR-----WVHSCIQRATYLGEITSVS-------------------- 231
+ G G+L GR ++ I G++ +
Sbjct: 221 L-----GQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 232 ---------NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLF 282
NS++ Y K G V A +F MK ++ ISWNTMI G +A LF
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALF 335
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLG 342
+EM D ++ ++ + G V+ R YF+ + V + ++
Sbjct: 336 SEMPNR-----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIAAYE 385
Query: 343 RAGLVEEAYILIKNMPME---CNAIVWRSLLAACRTHGNVKLA----EKVRKHLLELEPC 395
+ +EA L M +E + SLL+A N++L + V K ++ P
Sbjct: 386 KNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPV 445
Query: 396 HSSDYVLLANMYASTGQWNEMSKERRSMQERGVKK 430
H++ L MY+ G E+ + RR E +K+
Sbjct: 446 HNA----LITMYSRCG---EIMESRRIFDEMKLKR 473
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 244/463 (52%), Gaps = 33/463 (7%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
+IH + +TG + + +I + + G + + +FDR+ K D+ +N+MI G+
Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLI---GLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYV 198
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGG--LGSVVLGKQ-----LHCSTL 118
A + M +++ S + G + S + + +++
Sbjct: 199 KCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSM 258
Query: 119 KLGVENHAHVRN-----------------SLIHMYGVMKDIETAHQLFEEMLNKDLVAWN 161
G H + + ++I Y + + A LF++M ++D+VA+N
Sbjct: 259 IDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYN 318
Query: 162 SIIDCLVCCGKYNEALDFFTRM-VQSGMRPDDATFVVTLSACGAMGALAFGRWVH-SCIQ 219
S++ V + EAL+ F+ M +S + PDD T V+ L A +G L+ +H ++
Sbjct: 319 SMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVE 378
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
+ YLG V+ L+DMY+KCG+++ A +F ++ K++ WN MI GLA HG G A
Sbjct: 379 KQFYLGGKLGVA--LIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAF 436
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
+ + ++ ++PD ITF+GVL ACSH G V EG F++M R + ++P ++HYGCMVD
Sbjct: 437 DMLLQ-IERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 495
Query: 340 LLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD 399
+L R+G +E A LI+ MP+E N ++WR+ L AC H + E V KHL+ + S
Sbjct: 496 ILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSS 555
Query: 400 YVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPG 442
YVLL+NMYAS G W ++ + R M+ER ++K PG S++ L G
Sbjct: 556 YVLLSNMYASFGMWKDVRRVRTMMKERKIEKI-PGCSWIELDG 597
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 193/445 (43%), Gaps = 68/445 (15%)
Query: 2 NHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRV--------DKPD 53
+ + +IH R+ +TG +N + +I++ A S ++A VF + D
Sbjct: 26 DDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVED 85
Query: 54 AFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQL 113
FLWN +I+ + P +A+L E V D F+ S +LK LG V G Q+
Sbjct: 86 PFLWNAVIKSHSHGKDPRQALL--LLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 114 HCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKY 173
H K G+ + ++N LI +Y + + Q+F+ M +D V++NS+ID V CG
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 174 NEALDFF-------------TRMVQSGMRPDDATFVVTLSACG-------AMGALAFGRW 213
A + F M+ + D + + + ++ G
Sbjct: 204 VSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYV 263
Query: 214 VHSCIQRATYLGEITSVSN-----SLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
H I+ A L ++ + +++D YAK G V A +F M ++V+++N+M+ G
Sbjct: 264 KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAG 323
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGG----------FVDEGRRYF 318
+ EAL +F++M +E+ + PD T + VL A + G ++ E + Y
Sbjct: 324 YVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYL 383
Query: 319 ---------DIMSRDYNVQ-----------PTVKHYGCMVDLLGRAGLVEEAY---ILIK 355
D+ S+ ++Q ++ H+ M+ L GL E A+ + I+
Sbjct: 384 GGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIE 443
Query: 356 NMPMECNAIVWRSLLAACRTHGNVK 380
+ ++ + I + +L AC G VK
Sbjct: 444 RLSLKPDDITFVGVLNACSHSGLVK 468
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 210/398 (52%), Gaps = 7/398 (1%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A VF+ V D LWN ++ + ++A K M + D FTFS LL
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWN 161
+ GKQ+H K+ + V +L++MY + A + FE M+ +++V+WN
Sbjct: 256 ----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWN 311
Query: 162 SIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRA 221
++I G+ EA+ F +M+ ++PD+ TF LS+C A+ + V + + +
Sbjct: 312 AMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKK 371
Query: 222 TYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTL 281
+ SV+NSL+ Y++ G + EA F S++ +++SW ++I LASHG E+L +
Sbjct: 372 GS-ADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQM 430
Query: 282 FAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
F MLQ+ ++PD ITFL VL ACSHGG V EG R F M+ Y ++ +HY C++DLL
Sbjct: 431 FESMLQK--LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLL 488
Query: 342 GRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYV 401
GRAG ++EA ++ +MP E + + C H + + K LLE+EP +Y
Sbjct: 489 GRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYS 548
Query: 402 LLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVG 439
+L+N Y S G WN+ + R+ + PG S++G
Sbjct: 549 ILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWLG 586
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 209/454 (46%), Gaps = 57/454 (12%)
Query: 11 IYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF----GN 66
IY + F QN L+ + + + A +FD + + WN +I G G+
Sbjct: 67 IYNSLFLQNKLLQAYTKI--------REFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 67 TN-QPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
TN + + R+ + V D +F L+++ ++ G QLHC +K G+E+
Sbjct: 119 TNHRAHLGFCYLSRILFTD--VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS 176
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM-- 183
SL+H YG I A ++FE +L++DLV WN+++ V G +EA M
Sbjct: 177 CFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGS 236
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
++ R D TF LSAC + G+ +H+ + + +Y +I V+ +L++MYAK
Sbjct: 237 DKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIP-VATALLNMYAKSNH 291
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+ +A E F SM +NV+SWN MI+G A +G G EA+ LF +ML EN ++PD +TF VL
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN-LQPDELTFASVLS 350
Query: 304 ACSH-------------------GGFVDEGRRYFDIMSRDYNV-----------QPTVKH 333
+C+ F+ SR+ N+ +P +
Sbjct: 351 SCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVS 410
Query: 334 YGCMVDLLGRAGLVEEAYILIKNM--PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
+ ++ L G EE+ + ++M ++ + I + +L+AC G V+ + K + E
Sbjct: 411 WTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Query: 392 LEPCHSSD--YVLLANMYASTGQWNEMSKERRSM 423
+ D Y L ++ G +E S SM
Sbjct: 471 FYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 232/428 (54%), Gaps = 44/428 (10%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A VFD + + D +I F ++ +A +KR+ + P+ FTF ++
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLC--LGIRPNEFTFGTVIGSS 103
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMY------------------------- 136
V LGKQLHC LK+G+ ++ V +++++ Y
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 137 ----GVMK--DIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR- 189
G +K + E A LF M + +V WN++I G+ EA++ F M++ G+
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS--NSLVDMYAKCGAVEEA 247
P+++TF ++A + + G+ +H+C + +LG+ +V NSL+ Y+KCG +E++
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIK--FLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 248 YEIFRSMK--GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
F ++ +N++SWN+MI G A +G G EA+ +F +M+++ +RP+ +T LGVL AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTV---KHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
+H G + EG YF+ DY+ P + +HY CMVD+L R+G +EA LIK+MP++
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
W++LL C+ H N +LA+ +LEL+P S YV+L+N Y++ W +S RR
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 423 MQERGVKK 430
M+E G+K+
Sbjct: 461 MKETGLKR 468
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 132/296 (44%), Gaps = 35/296 (11%)
Query: 107 VVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDC 166
V+L ++ H S L ++ + + H+ + I AH++F+E+ D+++ ++I
Sbjct: 10 VILLRKYHSSANALVTKSPNSIPELVKHIDSDL--IRNAHKVFDEIPELDVISATAVIGR 67
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH----------- 215
V ++ EA F R++ G+RP++ TF + + + G+ +H
Sbjct: 68 FVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASN 127
Query: 216 --------SCIQRATYLGE------------ITSVSNSLVDMYAKCGAVEEAYEIFRSMK 255
+C + + L + + S++N L+ Y K EEA +FR+M
Sbjct: 128 VFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN-LISGYLKKHEFEEALSLFRAMP 186
Query: 256 GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGR 315
++V++WN +I G + G EA+ F +ML+E VV P+ TF + A S+ G+
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGK 246
Query: 316 RYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV-WRSLL 370
+ + V + ++ + G +E++ + + E IV W S++
Sbjct: 247 SIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMI 302
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 224/404 (55%), Gaps = 17/404 (4%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G ++ A +FD + + + W TMI G+ N+ + A ++ V+P+ S+
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE--------VMPEKTEVSW 237
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVR--NSLIHMYGVMKDIETAHQLFEEMLN 154
++G L ++ + V V N++I +G + +I A ++F+ M +
Sbjct: 238 TSMLLG----YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
+D W +I G EALD F +M + G+RP + + LS C + +L +GR V
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN 274
H+ + R + ++ V++ L+ MY KCG + +A +F K++I WN++I G ASHG
Sbjct: 354 HAHLVRCQFDDDVY-VASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGL 412
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
G EAL +F EM + P+ +T + +L ACS+ G ++EG F+ M + V PTV+HY
Sbjct: 413 GEEALKIFHEMPSSGTM-PNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHY 471
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEP 394
C VD+LGRAG V++A LI++M ++ +A VW +LL AC+TH + LAE K L E EP
Sbjct: 472 SCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEP 531
Query: 395 CHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
++ YVLL+++ AS +W +++ R++M+ V K PG S++
Sbjct: 532 DNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKF-PGCSWI 574
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 126/310 (40%), Gaps = 35/310 (11%)
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
NS++ Y + A QLF+EM +++V+WN ++ + EA + F M
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELM------ 105
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI--TSVSNSLVDMYAKCGAVEEA 247
P+ T G M G S R E+ T + L+D G +++A
Sbjct: 106 PERNVVSWTAMVKGYMQEGMVGE-AESLFWRMPERNEVSWTVMFGGLID----DGRIDKA 160
Query: 248 YEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSH 307
+++ M K+V++ MI GL G EA +F EM + NVV T+ ++
Sbjct: 161 RKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVV-----TWTTMITGYRQ 215
Query: 308 GGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME----CNA 363
VD R+ F++M V T G + +G +E+A + MPM+ CNA
Sbjct: 216 NNRVDVARKLFEVMPEKTEVSWTSMLLGYTL-----SGRIEDAEEFFEVMPMKPVIACNA 270
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSM 423
++ G V K R+ +E ++ + + Y G E M
Sbjct: 271 MI--------VGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 424 QERGVKKPEP 433
Q++GV+ P
Sbjct: 323 QKQGVRPSFP 332
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 145/386 (37%), Gaps = 85/386 (22%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPA----GDMNYAVSVFDRVDKPDAFL 56
M LK I R Y T N C+ + G +N A FD +
Sbjct: 1 MKRLKLILRRTYLTSTGVN----------CSFEISRLSRIGKINEARKFFDSLQFKAIGS 50
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
WN+++ G+ + P++A + M
Sbjct: 51 WNSIVSGYFSNGLPKEARQLFDEMS----------------------------------- 75
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA 176
E + N L+ Y + I A +FE M +++V+W +++ + G EA
Sbjct: 76 ------ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEA 129
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV-----S 231
F RM + ++ ++ V G + GR I +A L ++ V S
Sbjct: 130 ESLFWRMPER----NEVSWTVMFG-----GLIDDGR-----IDKARKLYDMMPVKDVVAS 175
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
+++ + G V+EA IF M+ +NV++W TMI G + A LF M ++ V
Sbjct: 176 TNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEV 235
Query: 292 RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAY 351
++ +L + G +++ +F++M ++P + M+ G G + +A
Sbjct: 236 -----SWTSMLLGYTLSGRIEDAEEFFEVMP----MKPVIA-CNAMIVGFGEVGEISKAR 285
Query: 352 ILIKNMPMECNAIVWRSLLAACRTHG 377
+ M NA WR ++ A G
Sbjct: 286 RVFDLMEDRDNA-TWRGMIKAYERKG 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 218 IQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTE 277
I R TYL + + ++ G + EA + F S++ K + SWN+++ G S+G E
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 278 ALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCM 337
A LF EM + NVV ++ G++ + E R F++M + V + M
Sbjct: 67 ARQLFDEMSERNVV-----SWNGLVSGYIKNRMIVEARNVFELMP-----ERNVVSWTAM 116
Query: 338 VDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHS 397
V + G+V EA L MP E N + W + G + A K L ++ P
Sbjct: 117 VKGYMQEGMVGEAESLFWRMP-ERNEVSWTVMFGGLIDDGRIDKARK----LYDMMPV-- 169
Query: 398 SDYVLLANMYASTGQWNEMSKER---RSMQERGV 428
D V NM + + + R M+ER V
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 231/437 (52%), Gaps = 13/437 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
K IHARI + + + ++ ++C+ GDM A VF R+ P+ WN++I G
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCS----CGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 64 FGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
E+A+L Y+R+ + P PD +TFS + V GK LH KLG
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPR--PDEYTFSAAISATAEPERFVHGKLLHGQVTKLGY 433
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
E V +L+ MY ++ E+A ++F+ M +D+V W +I G A+ FF
Sbjct: 434 ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
M + R D + + AC M L G H C+ T + SV +LVDMY K G
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFH-CLAIRTGFDCVMSVCGALVDMYGKNG 552
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
E A IF ++ WN+M+ + HG +AL+ F ++L EN PD +T+L +L
Sbjct: 553 KYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL-ENGFMPDAVTYLSLL 611
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
ACSH G +G+ ++ M ++ ++ KHY CMV+L+ +AGLV+EA LI+ P N
Sbjct: 612 AACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNN 670
Query: 363 -AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERR 421
A +WR+LL+AC N+++ + +L+L+P ++ ++LL+N+YA G+W ++++ RR
Sbjct: 671 QAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR 730
Query: 422 SMQERGVKKPEPGNSFV 438
++ K +PG S++
Sbjct: 731 KIRGLASSK-DPGLSWI 746
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 164/315 (52%), Gaps = 18/315 (5%)
Query: 1 MNHLKEIHARIYQTG--------FHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKP 52
+ ++IHA + G + N+L+ ++ V G + A VFD++
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLI--------SMYVRCGSLEQARKVFDKMPHR 161
Query: 53 DAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQ 112
+ +N + + N + F +V P++ TF+ L+++ L V++G
Sbjct: 162 NVVSYNALYSAYSR-NPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSS 220
Query: 113 LHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGK 172
L+ +KLG ++ V+ S++ MY D+E+A ++F+ + N+D VAWN++I + K
Sbjct: 221 LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDK 280
Query: 173 YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSN 232
+ L FF M+ SG+ P T+ + L+ C +G+ + G+ +H+ I + L ++ + N
Sbjct: 281 IEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP-LDN 339
Query: 233 SLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
+L+DMY CG + EA+ +F + N++SWN++I G + +G G +A+ ++ +L+ + R
Sbjct: 340 ALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 293 PDGITFLGVLCACSH 307
PD TF + A +
Sbjct: 400 PDEYTFSAAISATAE 414
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 8/266 (3%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
H K +H ++ + G+ ++ + VG ++ ++ + A VFD + + D LW MI
Sbjct: 420 HGKLLHGQVTKLGYERS-VFVGTTLL--SMYFKNREAESAQKVFDVMKERDVVLWTEMIV 476
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G E AV F+ M + + D F+ S ++ + + G+ HC ++ G
Sbjct: 477 GHSRLGNSELAVQFFIEMYREKNR--SDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF 534
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ V +L+ MYG ETA +F N DL WNS++ G +AL FF +
Sbjct: 535 DCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQ 594
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
++++G PD T++ L+AC G+ G+++ + ++ S +V++ +K G
Sbjct: 595 ILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYS-CMVNLVSKAG 653
Query: 243 AVEEAYEIF-RSMKGKNVIS-WNTMI 266
V+EA E+ +S G N W T++
Sbjct: 654 LVDEALELIEQSPPGNNQAELWRTLL 679
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 26/199 (13%)
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAW-------------NSIIDCLVCCG 171
+ + N+LI MY +E A ++F++M +++V +S+ ++ G
Sbjct: 21 YPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLG 80
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLS-ACGAMGALAFGRWVHSCIQRATYLGEITS- 229
+ + FF + + A+ VV L+ C ++ L R +H+ + A S
Sbjct: 81 SFQ--MIFFMPL------NEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESP 132
Query: 230 -VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN-GTEALTLFAEMLQ 287
+N+L+ MY +CG++E+A ++F M +NV+S+N + + + + + A L M
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 288 ENVVRPDGITFLGVLCACS 306
E V+P+ TF ++ C+
Sbjct: 193 E-YVKPNSSTFTSLVQVCA 210
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 233/438 (53%), Gaps = 7/438 (1%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K+IH++ + GF ++ VG +V + A ++ A VF + P+ W T+I G
Sbjct: 345 KQIHSQTIKVGF-EDSTDVGNALVDMYMKCSASEVE-ASRVFGAMVSPNVVSWTTLILGL 402
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ + F M+ + V P+ T S +L+ L V ++H L+ V+
Sbjct: 403 VDHGFVQDC--FGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDG 460
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V NSL+ Y + ++ A + M +D + + S++ GK+ AL M
Sbjct: 461 EMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMY 520
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
G+R D + +SA +GAL G+ +H C + SV NSLVDMY+KCG++
Sbjct: 521 GDGIRMDQLSLPGFISASANLGALETGKHLH-CYSVKSGFSGAASVLNSLVDMYSKCGSL 579
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
E+A ++F + +V+SWN ++ GLAS+G + AL+ F EM + PD +TFL +L A
Sbjct: 580 EDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKET-EPDSVTFLILLSA 638
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
CS+G D G YF +M + YN++P V+HY +V +LGRAG +EEA +++ M ++ NA+
Sbjct: 639 CSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAM 698
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
++++LL ACR GN+ L E + L L P + Y+LLA++Y +G+ K R M
Sbjct: 699 IFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMT 758
Query: 425 ERGVKKPEPGNSFVGLPG 442
E+ + K + G S V + G
Sbjct: 759 EKRLSK-KLGKSTVEVQG 775
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 174/361 (48%), Gaps = 20/361 (5%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV 101
A +FD + F W MI F + + A+ ++ M H P+ FTFS +++
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH--PNEFTFSSVVRSC 134
Query: 102 GGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWN 161
GL + G ++H S +K G E ++ V +SL +Y + A +LF + N D ++W
Sbjct: 135 AGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWT 194
Query: 162 SIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQR 220
+I LV K+ EAL F++ MV++G+ P++ TFV L A +G L FG+ +HS I R
Sbjct: 195 MMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVR 253
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALT 280
L + + SLVD Y++ +E+A + S ++V W +++ G + EA+
Sbjct: 254 GIPLNVV--LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVG 311
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNV--QPTVKHYGCMV 338
F EM ++P+ T+ +L CS +D G++ I S+ V + + +V
Sbjct: 312 TFLEMRSLG-LQPNNFTYSAILSLCSAVRSLDFGKQ---IHSQTIKVGFEDSTDVGNALV 367
Query: 339 DLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVK-----LAEKVRKHLLELE 393
D+ + E + + N + W +L+ HG V+ L E V++ E+E
Sbjct: 368 DMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR---EVE 424
Query: 394 P 394
P
Sbjct: 425 P 425
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 215/456 (47%), Gaps = 25/456 (5%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K IH+ I G N ++ ++ F + M AV V + + D FLW +++ GF
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYS---QFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ ++AV + M+ + P+ FT+S +L + + S+ GKQ+H T+K+G E+
Sbjct: 301 VRNLRAKEAVGTFLEMRS--LGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 125 HAHVRNSLIHMYGVMKDIET-AHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
V N+L+ MY E A ++F M++ ++V+W ++I LV G + M
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
V+ + P+ T L AC + + +H+ + R GE+ V NSLVD YA
Sbjct: 419 VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV-VGNSLVDAYASSRK 477
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
V+ A+ + RSMK ++ I++ +++ G AL++ M + +R D ++ G +
Sbjct: 478 VDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG-IRMDQLSLPGFIS 536
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNA 363
A ++ G ++ G ++ S +VD+ + G +E+A + + + +
Sbjct: 537 ASANLGALETG-KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP-DV 594
Query: 364 IVWRSLLAACRTHGNVKLA----EKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKE 419
+ W L++ ++G + A E++R + E EP + +LL+ S G+ ++ E
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMR--MKETEPDSVTFLILLSA--CSNGRLTDLGLE 650
Query: 420 RRSMQERGVKKPEPG-NSFVGLPGI-----RLENET 449
+ ++ + EP +V L GI RLE T
Sbjct: 651 YFQVMKK-IYNIEPQVEHYVHLVGILGRAGRLEEAT 685
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 135/263 (51%), Gaps = 5/263 (1%)
Query: 109 LGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLV 168
+G +HC +K G+ + + N+L+ +Y I A +LF+EM ++ + AW +I
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 169 CCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEIT 228
++ AL F M+ SG P++ TF + +C + +++G VH + + + G +
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGN-S 159
Query: 229 SVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQE 288
V +SL D+Y+KCG +EA E+F S++ + ISW MI L EAL ++EM++
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 289 NVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVE 348
V P+ TF+ +L A S G + +I+ R + +K +VD + +E
Sbjct: 220 G-VPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLK--TSLVDFYSQFSKME 276
Query: 349 EAYILIKNMPMECNAIVWRSLLA 371
+A + + N E + +W S+++
Sbjct: 277 DA-VRVLNSSGEQDVFLWTSVVS 298
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 217/411 (52%), Gaps = 40/411 (9%)
Query: 56 LWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHC 115
++NT+IR + T + + ++ + M HV P+ TF L+K SV G LH
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLAS--HVQPNNLTFPSLIKAACSSFSVSYGVALHG 110
Query: 116 STLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE 175
LK G V+ S + YG + D+E++ ++F+++LN +VA NS++D G+ +
Sbjct: 111 QALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDY 170
Query: 176 ALDFFTRMV----------------------------------QSGMRPDDATFVVTLSA 201
A ++F RM ++ + P++ATFV LS+
Sbjct: 171 AFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSS 230
Query: 202 CGAM--GALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV 259
C G + G+ +H + + T++ +L+DMY K G +E A IF ++ K V
Sbjct: 231 CANFDQGGIRLGKQIHGYVMSKEII-LTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKV 289
Query: 260 ISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFD 319
+WN +I LAS+G +AL +F EM++ + V P+GIT L +L AC+ VD G + F
Sbjct: 290 CAWNAIISALASNGRPKQALEMF-EMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 320 IMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNV 379
+ +Y + PT +HYGC+VDL+GRAGL+ +A I+++P E +A V +LL AC+ H N
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENT 408
Query: 380 KLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKK 430
+L V K L+ L+P H YV L+ A W+E K R++M E G++K
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 3/221 (1%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVV-PDTFTFS 95
G+M+YA F R+ D W T+I GF KA++ + M Q E V+ P+ TF
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 96 FLLKIVGGL--GSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
+L G + LGKQ+H + + + +L+ MYG D+E A +F+++
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
+K + AWN+II L G+ +AL+ F M S + P+ T + L+AC + G
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQ 345
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM 254
+ S I + + +VD+ + G + +A +S+
Sbjct: 346 LFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL 386
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 137/289 (47%), Gaps = 39/289 (13%)
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
K +N++I + G+Y +L FT M+ S ++P++ TF + A + ++++G +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 215 HSCIQRATYL-------------GEITSVS-----------------NSLVDMYAKCGAV 244
H + +L GE+ + NSL+D + G +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN--VVRPDGITFLGVL 302
+ A+E F+ M +V+SW T+I G + G +AL +F EM+Q V+ P+ TF+ VL
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 303 CACS---HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
+C+ GG + + +MS++ + T ++D+ G+AG +E A + +
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKE--IILTTTLGTALLDMYGKAGDLEMALTIFDQI-R 285
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYA 408
+ W ++++A ++G K A ++ + +++ H + LLA + A
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFE-MMKSSYVHPNGITLLAILTA 333
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 213/416 (51%), Gaps = 46/416 (11%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K IH + + + + +V +I + G++ A VF + + D ++N MI G+
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYS---KFGEVGNARKVFSDLGEQDLVVFNAMISGY 193
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
N +Q ++A+ K M+ + PD T+
Sbjct: 194 ANNSQADEALNLVKDMKL--LGIKPDVITW------------------------------ 221
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEALDFF 180
N+LI + M++ E ++ E M D+V+W SII LV + +A D F
Sbjct: 222 -----NALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+M+ G+ P+ AT + L AC + + G+ +H T L + V ++L+DMY K
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG-YSVVTGLEDHGFVRSALLDMYGK 335
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
CG + EA +FR K +++N+MI A+HG +A+ LF +M + + D +TF
Sbjct: 336 CGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM-EATGEKLDHLTFTA 394
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
+L ACSH G D G+ F +M Y + P ++HY CMVDLLGRAG + EAY +IK M ME
Sbjct: 395 ILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME 454
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEM 416
+ VW +LLAACR HGN++LA KHL ELEP +S + +LL ++YA+ G W +
Sbjct: 455 PDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 59/395 (14%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
+HA + +G + + K++ F V G + A VFD + K D MI
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTF---YVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
++++ F++ M + + D F LLK L GK +HC LK E+ A
Sbjct: 95 NGYYQESLDFFREMYKDGLKL--DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDA 152
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
+ +SLI MY ++ A ++F ++ +DLV +N++I + +EAL+ M
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
G++PD V+T W N+L+ ++ E+
Sbjct: 213 GIKPD----VIT--------------W------------------NALISGFSHMRNEEK 236
Query: 247 AYEIFRSM----KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
EI M +V+SW ++I GL + +A F +ML + P+ T + +L
Sbjct: 237 VSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLY-PNSATIITLL 295
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG----CMVDLLGRAGLVEEAYILIKNMP 358
AC+ ++ G+ Y+V ++ +G ++D+ G+ G + EA IL + P
Sbjct: 296 PACTTLAYMKHGKEI-----HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELE 393
+ + + S++ HG LA+K + ++E
Sbjct: 351 KK-TTVTFNSMIFCYANHG---LADKAVELFDQME 381
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 6/279 (2%)
Query: 110 GKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVC 169
G+ LH + G+ + L+ Y + A ++F+EM +D+ +I
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 170 CGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS 229
G Y E+LDFF M + G++ D L A + FG+ +H + + +Y +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
VS SL+DMY+K G V A ++F + ++++ +N MI G A++ EAL L +M +
Sbjct: 155 VS-SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM-KLL 212
Query: 290 VVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEE 349
++PD IT+ ++ SH ++ ++M D +P V + ++ L E+
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEK 271
Query: 350 AYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKV 385
A+ K M + N+ +LL AC T +K +++
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 231/433 (53%), Gaps = 9/433 (2%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++H + ++G LV +I F + S D A F+ + + W+++I F
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRA---FEDSPQKSSTTWSSIISCFA 92
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
P ++ F K+M G ++ PD K L +G+ +HC ++K G +
Sbjct: 93 QNELPWMSLEFLKKMMAG--NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
V +SL+ MY +I A ++F+EM +++V W+ ++ G+ EAL F +
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
+ +D +F +S C L GR +H + + + V +SLV +Y+KCG E
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
AY++F + KN+ WN M+ A H + + + LF M + + ++P+ ITFL VL AC
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM-KLSGMKPNFITFLNVLNAC 328
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
SH G VDEGR YFD M ++ ++PT KHY +VD+LGRAG ++EA +I NMP++ V
Sbjct: 329 SHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV 387
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQE 425
W +LL +C H N +LA + EL P S ++ L+N YA+ G++ + +K R+ +++
Sbjct: 388 WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRD 447
Query: 426 RGVKKPEPGNSFV 438
RG KK E G S+V
Sbjct: 448 RGEKK-ETGLSWV 459
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 4/275 (1%)
Query: 106 SVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIID 165
S + G QLH +K G+ V N+LI+ Y + + + FE+ K W+SII
Sbjct: 30 STIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIIS 89
Query: 166 CLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLG 225
C +L+F +M+ +RPDD +C + GR VH + Y
Sbjct: 90 CFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDA 149
Query: 226 EITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEM 285
++ V +SLVDMYAKCG + A ++F M +NV++W+ M+ G A G EAL LF E
Sbjct: 150 DVF-VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 286 LQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAG 345
L EN+ D +F V+ C++ ++ GR+ + + + +V L + G
Sbjct: 209 LFENLAVND-YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSS-LVSLYSKCG 266
Query: 346 LVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVK 380
+ E AY + +P++ N +W ++L A H + +
Sbjct: 267 VPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 231/429 (53%), Gaps = 19/429 (4%)
Query: 15 GFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAV 74
G +++ VG +V + V G A V DRV++ D L +I G+ + +AV
Sbjct: 195 GLEVSNVFVGSALV--DMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAV 252
Query: 75 LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIH 134
++ M V P+ +T++ +L G L + GK +H +K G E+ + SL+
Sbjct: 253 KAFQSMLV--EKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLT 310
Query: 135 MYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDAT 194
MY ++ + ++F+ + + V+W S+I LV G+ AL F +M++ ++P+ T
Sbjct: 311 MYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370
Query: 195 FVVTLSACGAMGALAFGRWVHSCI-----QRATYLGEITSVSNSLVDMYAKCGAVEEAYE 249
L C + GR +H + R Y G + L+D+Y KCG + A
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAG------SGLIDLYGKCGCSDMARL 424
Query: 250 IFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGG 309
+F ++ +VIS NTMI A +G G EAL LF M+ + +P+ +T L VL AC++
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGL-QPNDVTVLSVLLACNNSR 483
Query: 310 FVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSL 369
V+EG FD +D + T HY CMVDLLGRAG +EEA +L + + + ++WR+L
Sbjct: 484 LVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTL 541
Query: 370 LAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVK 429
L+AC+ H V++AE++ + +LE+EP +L++N+YASTG+WN + + + M++ +K
Sbjct: 542 LSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK 601
Query: 430 KPEPGNSFV 438
K P S+V
Sbjct: 602 K-NPAMSWV 609
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 185/375 (49%), Gaps = 11/375 (2%)
Query: 4 LKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
+K I A + ++GF + G +V S+ GD++YA VFD + + WN++I
Sbjct: 84 IKTIQAHMLKSGFPAE--ISGSKLV--DASLKCGDIDYARQVFDGMSERHIVTWNSLIAY 139
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ ++AV Y+ M +V+PD +T S + K L ++ H + LG+E
Sbjct: 140 LIKHRRSKEAVEMYRLMITN--NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLE 197
Query: 124 -NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
++ V ++L+ MY A + + + KD+V ++I G+ EA+ F
Sbjct: 198 VSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
M+ ++P++ T+ L +CG + + G+ +H + ++ + + S SL+ MY +C
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS-QTSLLTMYLRCS 316
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
V+++ +F+ ++ N +SW ++I GL +G AL F +M++++ ++P+ T L
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS-IKPNSFTLSSAL 375
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
CS+ +EGR+ I+++ Y ++DL G+ G + A ++ + E +
Sbjct: 376 RGCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS-EVD 433
Query: 363 AIVWRSLLAACRTHG 377
I +++ + +G
Sbjct: 434 VISLNTMIYSYAQNG 448
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 121/245 (49%), Gaps = 9/245 (3%)
Query: 141 DIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLS 200
DI+ A Q+F+ M + +V WNS+I L+ + EA++ + M+ + + PD+ T S
Sbjct: 114 DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLS---S 170
Query: 201 ACGAMGALAFGRWVHSCIQRATYLG-EITS--VSNSLVDMYAKCGAVEEAYEIFRSMKGK 257
A L+ + A LG E+++ V ++LVDMY K G EA + ++ K
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 258 NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRY 317
+V+ +I+G + G TEA+ F ML E V+P+ T+ VL +C + + G+
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEK-VQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 318 FDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHG 377
+M + + + ++ + R LV+++ + K + N + W SL++ +G
Sbjct: 290 HGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYP-NQVSWTSLISGLVQNG 347
Query: 378 NVKLA 382
++A
Sbjct: 348 REEMA 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 195 FVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM 254
F L C +++ + + + + ++ + EI+ + LVD KCG ++ A ++F M
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISG--SKLVDASLKCGDIDYARQVFDGM 125
Query: 255 KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEG 314
+++++WN++I L H EA+ ++ M+ NV+ PD T V A S E
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL-PDEYTLSSVFKAFSDLSLEKEA 184
Query: 315 RR 316
+R
Sbjct: 185 QR 186
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 221/402 (54%), Gaps = 8/402 (1%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G ++ +V V + WN++I + + +A+ +++M + PD FT +
Sbjct: 353 GKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT--QRIKPDAFTLAS 410
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
+ G V LGKQ+H ++ V + V+NSLI MY +++A +F ++ ++
Sbjct: 411 SISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRS 469
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
+V WNS++ G EA+ F M S + ++ TF+ + AC ++G+L G+WVH
Sbjct: 470 VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHH 529
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
+ + T +L+DMYAKCG + A +FR+M ++++SW++MI HG
Sbjct: 530 KLIISGLKDLFTD--TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIG 587
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
A++ F +M+ E+ +P+ + F+ VL AC H G V+EG+ YF++M + + V P +H+ C
Sbjct: 588 SAISTFNQMV-ESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFAC 645
Query: 337 MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCH 396
+DLL R+G ++EAY IK MP +A VW SL+ CR H + + + ++ L ++
Sbjct: 646 FIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDD 705
Query: 397 SSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
+ Y LL+N+YA G+W E + R +M+ +KK PG S +
Sbjct: 706 TGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKV-PGYSAI 746
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 205/461 (44%), Gaps = 43/461 (9%)
Query: 4 LKEIHARIYQTG-FHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
+ ++HA + TG ++ L V K+I A G + + VF+ PD+F++ +I+
Sbjct: 17 VSQLHAHLLVTGRLRRDPLPVTKLIESYAF---MGSPDSSRLVFEAFPYPDSFMYGVLIK 73
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
+ + A+ Y R+ + F S L G + +G ++H +K GV
Sbjct: 74 CNVWCHLLDAAIDLYHRLVSETTQISKFVFP-SVLRACAGSREHLSVGGKVHGRIIKGGV 132
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
++ A + SL+ MYG ++ A ++F+ M +DLVAW++++ + G+ +AL F
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY-LGEITSVSNSLVDMYAKC 241
MV G+ PD T + + C +G L R VH I R + L E ++ NSL+ MY+KC
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE--TLCNSLLTMYSKC 250
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G + + IF + KN +SW MI +AL F+EM++ + P+ +T V
Sbjct: 251 GDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG-IEPNLVTLYSV 309
Query: 302 LCACSHGGFVDEGRRYFDIMSR---DYNVQP----------------------------T 330
L +C G + EG+ R D N +
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN 369
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKVRK 387
+ + ++ L G+V +A L + M ++ +A S ++AC G V L +++
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHG 429
Query: 388 HLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGV 428
H++ + L +MY+ +G + S ++ R V
Sbjct: 430 HVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 186/374 (49%), Gaps = 11/374 (2%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++H RI + G + ++ ++ G+++ A VFD + D W+T++
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYG---QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+ KA+ +K M + V PD T +++ LG + + + +H + +
Sbjct: 179 ENGEVVKALRMFKCMV--DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE-ALDFFTRMV 184
+ NSL+ MY D+ ++ ++FE++ K+ V+W ++I G+++E AL F+ M+
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY-NRGEFSEKALRSFSEMI 295
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+SG+ P+ T LS+CG +G + G+ VH R S+S +LV++YA+CG +
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKL 355
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
+ + R + +N+++WN++I A G +AL LF +M+ + ++PD T + A
Sbjct: 356 SDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR-IKPDAFTLASSISA 414
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
C + G V G++ + R V++ ++D+ ++G V+ A + + + +
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIKHR-SVV 471
Query: 365 VWRSLLAACRTHGN 378
W S+L +GN
Sbjct: 472 TWNSMLCGFSQNGN 485
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 133/273 (48%), Gaps = 17/273 (6%)
Query: 5 KEIHARIYQTG----FHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
K+IH + +T F QN L+ + +G ++ A +VF+++ WN+M
Sbjct: 425 KQIHGHVIRTDVSDEFVQNSLI--------DMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
+ GF +A+ + M ++ + TF +++ +GS+ GK +H +
Sbjct: 477 LCGFSQNGNSVEAISLFDYMYHS--YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 534
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
G+++ +LI MY D+ A +F M ++ +V+W+S+I+ G+ A+ F
Sbjct: 535 GLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTF 593
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+MV+SG +P++ F+ LSACG G++ G++ + + ++ + + +D+ ++
Sbjct: 594 NQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN-LMKSFGVSPNSEHFACFIDLLSR 652
Query: 241 CGAVEEAYEIFRSMKG-KNVISWNTMILGLASH 272
G ++EAY + M + W +++ G H
Sbjct: 653 SGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH 685
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 233/432 (53%), Gaps = 10/432 (2%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
H ++IH +G + +LVV ++ + G +YA+SVF ++ D WN +I
Sbjct: 151 HGEQIHGNAICSGVSRYNLVVWNSVM--DMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
++ E A+ + M++ E + PD +T S ++ I L + GKQ +K+G
Sbjct: 209 SCSDSGNKEVALDQFWLMREME--IQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLV--CCGKYNEALDFF 180
+++ V + I M+ ++ + +LF E+ D V NS+I CCG+ +AL F
Sbjct: 267 LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE--DALRLF 324
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+ +RPD TF LS+ A+ L G VHS + + + + T+V+ SL++MY K
Sbjct: 325 ILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLD-TAVATSLMEMYFK 382
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
G+V+ A +F GK++I WNT+I+GLA + E+L +F ++L ++PD +T +G
Sbjct: 383 TGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMG 442
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
+L AC + GFV+EG + F M + + V P +HY C+++LL R G++ EA + +P E
Sbjct: 443 ILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFE 502
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKER 420
++ +W +L A G+ +LAE V K +LE EP S Y++L +Y T +W K R
Sbjct: 503 PSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLR 562
Query: 421 RSMQERGVKKPE 432
+M E +K +
Sbjct: 563 YAMNEHKLKSAQ 574
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 140/269 (52%), Gaps = 8/269 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G +N A+ +FD + + D WNTMI G + E + + MQ+ E + P FTFS
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWE--IRPTEFTFSI 141
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAH-VRNSLIHMYGVMKDIETAHQLFEEMLNK 155
L +V V G+Q+H + + GV + V NS++ MY + + A +F M ++
Sbjct: 142 LASLV---TCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
D+V+WN +I G ALD F M + ++PD+ T + +S C + L+ G+
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
+ + +L + V + +DM++KC ++++ ++FR ++ + + N+MI + H G
Sbjct: 259 ALCIKMGFLSN-SIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCG 317
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCA 304
+AL LF + ++ VRPD TF VL +
Sbjct: 318 EDALRLFILAMTQS-VRPDKFTFSSVLSS 345
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 142 IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVV--TL 199
+ A LF+EM +D+V+WN++I LV CG + + F M + +RP + TF + +L
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 200 SACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV 259
C G G + S + R + V NS++DMY + G + A +F +M+ ++V
Sbjct: 146 VTCVRHGEQIHGNAICSGVSRYNLV-----VWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 260 ISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR 316
+SWN +IL + GN AL F +++E ++PD T V+ CS + +G++
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFW-LMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 56/237 (23%)
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
+F+R+V + LS + + + + + R TY G N + +Y
Sbjct: 6 YFSRLVNRSL----------LSKSPTLAKIVHAQLLEAGFVRTTYWG------NRCLQLY 49
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
K G+V A ++F + KN I+WN + GL +G AL LF EM + +VV + T
Sbjct: 50 FKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWN--TM 107
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT-------------VKH------------ 333
+ L +C GF + G R F M R + ++PT V+H
Sbjct: 108 ISGLVSC---GFHEYGIRVFFDMQR-WEIRPTEFTFSILASLVTCVRHGEQIHGNAICSG 163
Query: 334 --------YGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
+ ++D+ R G+ + A + M + + + W L+ +C GN ++A
Sbjct: 164 VSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME-DRDVVSWNCLILSCSDSGNKEVA 219
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 217/403 (53%), Gaps = 7/403 (1%)
Query: 37 GDMNYAVSVFDRVDKP-DAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
GD+ A + + + D WN++I G ++ +++ ++ M + E + D T
Sbjct: 527 GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSR-EGKIRHDLITLL 585
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
+ G LG V+ G+ H +K E ++N+LI MYG KDIE+A ++F + +
Sbjct: 586 GTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 645
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
+L +WN +I L E F + + P++ TFV LSA +G+ ++G H
Sbjct: 646 NLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
+ R + VS +LVDMY+ CG +E ++FR+ ++ +WN++I HG G
Sbjct: 703 CHLIRRGFQAN-PFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMG 761
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
+A+ LF E+ + + P+ +F+ +L ACSH GF+DEG Y+ M + V+P +H
Sbjct: 762 EKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRV 821
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPC 395
+VD+LGRAG + EAY I + A VW +LL+AC HG+ KL ++V + L E+EP
Sbjct: 822 WIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPD 881
Query: 396 HSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
++S Y+ LAN Y G W E + R+ +++ +KK PG S +
Sbjct: 882 NASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKL-PGYSVI 923
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 185/393 (47%), Gaps = 9/393 (2%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+ +H + G Q+ K++ F G++ + +FD + + D +WN+MI
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYG---RTGELVSSSCLFDELKEKDVIVWNSMITAL 163
Query: 65 GNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ AV LF + + +G D+ T + L LHC ++ G+
Sbjct: 164 NQNGRYIAAVGLFIEMIHKGNEF---DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLV 220
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+ + N+L+++Y +++ +A +F M ++D+V+WN+I+ + G ++L +F M
Sbjct: 221 GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM 280
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI-TSVSNSLVDMYAKCG 242
SG D TF +SAC ++ L G +H + ++ Y E SV NS++ MY+KCG
Sbjct: 281 TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
E A +F + ++VIS N ++ G A++G EA + +M + ++PD T + +
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
C F EGR R ++ ++D+ G+ GL +A +L K +
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-D 459
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPC 395
+ W S+++A +G A+ + K ++ C
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSC 492
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 183/397 (46%), Gaps = 42/397 (10%)
Query: 45 VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL 104
+F D WN+MI F KA +K + F+ S +L I+
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS---EYSCSKFSLSTVLAILTSC 507
Query: 105 GS---VVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWN 161
S ++ GK +HC KLG A +R +ET + +DL +WN
Sbjct: 508 DSSDSLIFGKSVHCWLQKLGDLTSAFLR------------LETMSE------TRDLTSWN 549
Query: 162 SIIDCLVCCGKYNEALDFFTRMVQSG-MRPDDATFVVTLSACGAMGALAFGRWVHSCIQR 220
S+I G + E+L F M + G +R D T + T+SA G +G + GR H +
Sbjct: 550 SVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIK 609
Query: 221 ATYLGEI-TSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
+ L E+ T + N+L+ MY +C +E A ++F + N+ SWN +I L+ + G E
Sbjct: 610 S--LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVF 667
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEG-RRYFDIMSRDYNVQPTVKHYGCMV 338
LF + E P+ ITF+G+L A + G G + + ++ R + P V +V
Sbjct: 668 QLFRNLKLE----PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALV 721
Query: 339 DLLGRAGLVEEAYILIKNMPMECNAI-VWRSLLAACRTHGNVKLAEKVRKHL---LELEP 394
D+ G++E + +N + N+I W S+++A HG + A ++ K L E+EP
Sbjct: 722 DMYSSCGMLETGMKVFRNSGV--NSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 395 CHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKP 431
+ S ++ L + + +G +E + M+E+ KP
Sbjct: 780 -NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKP 815
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/411 (32%), Positives = 208/411 (50%), Gaps = 39/411 (9%)
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVP-DTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+ + N E+A+ + +M +P D FS LK VLG +H ++K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSS--FALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVK 76
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEA--- 176
++ V +L+ MYG + A +LF+E+ ++ V WN++I CGK EA
Sbjct: 77 SNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVEL 136
Query: 177 ------------------------------LDFFTRMVQSGMRPDDATFVVTLSACGAMG 206
++F+ +M++ +P+ T + +SAC A+G
Sbjct: 137 YEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIG 196
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMI 266
A + +HS R + + + LV+ Y +CG++ +F SM+ ++V++W+++I
Sbjct: 197 AFRLIKEIHSYAFR-NLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLI 255
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYN 326
A HG+ AL F EM + V PD I FL VL ACSH G DE YF M DY
Sbjct: 256 SAYALHGDAESALKTFQEM-ELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYG 314
Query: 327 VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVR 386
++ + HY C+VD+L R G EEAY +I+ MP + A W +LL ACR +G ++LAE
Sbjct: 315 LRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAA 374
Query: 387 KHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSF 437
+ LL +EP + ++YVLL +Y S G+ E + R M+E GV K PG+S+
Sbjct: 375 RELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGV-KVSPGSSW 424
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 7/268 (2%)
Query: 37 GDMNYAVSVFDRVD-KPDAFLWNTMIRGF-GNTNQPEKAVLFYKRMQQGEPHVVPDTFTF 94
G + AV +++ +D P+ +N +I+G G + +A+ FY++M E P+ T
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMI--EFRFKPNLITL 185
Query: 95 SFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN 154
L+ +G+ L K++H + +E H +++ L+ YG I +F+ M +
Sbjct: 186 LALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED 245
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
+D+VAW+S+I G AL F M + + PDD F+ L AC G LA V
Sbjct: 246 RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAG-LADEALV 304
Query: 215 HSCIQRATY-LGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASH 272
+ + Y L + LVD+ ++ G EEAY++ ++M K +W ++ ++
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNY 364
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLG 300
G A E+L P LG
Sbjct: 365 GEIELAEIAARELLMVEPENPANYVLLG 392
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 241/436 (55%), Gaps = 16/436 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH + G+ ++ L VG I++ + G + SVF ++ + + W TMI
Sbjct: 296 RQIHGLCIKRGY-ESLLEVGNILM--SRYSKCGVLEAVKSVFHQMSERNVVSWTTMI--- 349
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
++N+ + +F G V P+ TF L+ V + G ++H +K G +
Sbjct: 350 -SSNKDDAVSIFLNMRFDG---VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVS 405
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V NS I +Y + +E A + FE++ +++++WN++I G +EAL F
Sbjct: 406 EPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA 465
Query: 185 QSGMRPDDATFVVTLSACGAMGALAF--GRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
M P++ TF L+A ++ G+ H+ + + L VS++L+DMYAK G
Sbjct: 466 AETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLG-LNSCPVVSSALLDMYAKRG 523
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
++E+ ++F M KN W ++I +SHG+ + LF +M++ENV PD +TFL VL
Sbjct: 524 NIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA-PDLVTFLSVL 582
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
AC+ G VD+G F++M YN++P+ +HY CMVD+LGRAG ++EA L+ +P
Sbjct: 583 TACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPG 642
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
+ +S+L +CR HGNVK+ KV + +E++P S YV + N+YA +W++ ++ R++
Sbjct: 643 ESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKA 702
Query: 423 MQERGVKKPEPGNSFV 438
M+++ V K E G S++
Sbjct: 703 MRKKNVSK-EAGFSWI 717
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 193/429 (44%), Gaps = 52/429 (12%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
AG + A+ +F+ + PD WNT++ GF + + A+ F RM+ VV D FT+S
Sbjct: 124 AGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSA--GVVFDAFTYS 178
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
L G +LG QL + +K G+E+ V NS I MY A ++F+EM K
Sbjct: 179 TALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK 238
Query: 156 DLVAWNSIIDCLVCCGKYN-EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
D+++WNS++ L G + EA+ F M++ G+ D +F ++ C L R +
Sbjct: 239 DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQI 298
Query: 215 HS-CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG 273
H CI+R + V N L+ Y+KCG +E +F M +NV+SW TMI
Sbjct: 299 HGLCIKRG--YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SS 351
Query: 274 NGTEALTLFAEMLQENVVRPDGITFLGVLCA----------------CSHGGFVDE---G 314
N +A+++F M + V P+ +TF+G++ A C GFV E G
Sbjct: 352 NKDDAVSIFLNMRFDGVY-PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVG 410
Query: 315 RRYFDIMSRDYNVQPTVKHY-----------GCMVDLLGRAGLVEEAYILIKNMPMEC-- 361
+ + ++ ++ K + M+ + G EA + + E
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP 470
Query: 362 NAIVWRSLLAACRTHGN--VKLAEKVRKHLLE--LEPCHSSDYVLLANMYASTGQWNEMS 417
N + S+L A + VK ++ HLL+ L C LL +MYA G +E
Sbjct: 471 NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALL-DMYAKRGNIDESE 529
Query: 418 KERRSMQER 426
K M ++
Sbjct: 530 KVFNEMSQK 538
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 145/308 (47%), Gaps = 13/308 (4%)
Query: 68 NQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
N P +A+ +F + +Q G D T LK G + G Q+H + G +
Sbjct: 54 NSPARALSIFKENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFV 111
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
V N+++ MY + A +FE +++ D+V+WN+I+ AL+F RM +
Sbjct: 112 CVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSA 168
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
G+ D T+ LS C G + S + + ++ V NS + MY++ G+
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV-VGNSFITMYSRSGSFRG 227
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGN-GTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
A +F M K++ISWN+++ GL+ G G EA+ +F +M++E V D ++F V+ C
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG-VELDHVSFTSVITTC 286
Query: 306 SHGGFVDEGRRYFDI-MSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
H + R+ + + R Y V + ++ + G++E + M E N +
Sbjct: 287 CHETDLKLARQIHGLCIKRGYESLLEVGN--ILMSRYSKCGVLEAVKSVFHQMS-ERNVV 343
Query: 365 VWRSLLAA 372
W +++++
Sbjct: 344 SWTTMISS 351
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 222/438 (50%), Gaps = 44/438 (10%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
++H I ++GF N V +I A +M A ++ + ++ D WN+MI G
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYA---KCREMESARALLEGMEVDDVVSWNSMIVGCV 304
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVG-GLGSVVLGKQLHCSTLKLGVEN 124
+A+ + RM + + + D FT +L + + HC +K G
Sbjct: 305 RQGLIGEALSMFGRMHERDMKI--DDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYAT 362
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ V N+L+ MY +++A ++FE M+ KD+++W +++ G Y+EAL F M
Sbjct: 363 YKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMR 422
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
G+ PD LSA + L FG+ VH ++ + + SV+NSLV MY KCG++
Sbjct: 423 VGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSL-SVNNSLVTMYTKCGSL 481
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
E+A IF SM+ +++I+W +I+G A +
Sbjct: 482 EDANVIFNSMEIRDLITWTCLIVGYAKN-------------------------------- 509
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
G +++ +RYFD M Y + P +HY CM+DL GR+G + L+ M +E +A
Sbjct: 510 ----GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDAT 565
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQ 424
VW+++LAA R HGN++ E+ K L+ELEP ++ YV L+NMY++ G+ +E + RR M+
Sbjct: 566 VWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMK 625
Query: 425 ERGVKKPEPGNSFVGLPG 442
R + K EPG S+V G
Sbjct: 626 SRNISK-EPGCSWVEEKG 642
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 187/383 (48%), Gaps = 13/383 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH +TGF + VV ++ A + Y + + + W +M+ G+
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME--GEKNNVTWTSMLTGY 202
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
KA+ ++ +++ + +TF +L + + +G Q+HC +K G +
Sbjct: 203 SQNGFAFKAIECFRDLRREGNQ--SNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ +V+++LI MY +++E+A L E M D+V+WNS+I V G EAL F RM
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 185 QSGMRPDDATFVVTLSACGAMG--ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
+ M+ DD T L+ C A+ + H I + Y V+N+LVDMYAK G
Sbjct: 321 ERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGY-ATYKLVNNALVDMYAKRG 378
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
++ A ++F M K+VISW ++ G +G+ EAL LF M + + PD I VL
Sbjct: 379 IMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNM-RVGGITPDKIVTASVL 437
Query: 303 CACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
A + ++ G++ + + + + +V + +V + + G +E+A ++ +M +
Sbjct: 438 SASAELTLLEFGQQVHGNYIKSGFPSSLSVNN--SLVTMYTKCGSLEDANVIFNSMEIR- 494
Query: 362 NAIVWRSLLAACRTHGNVKLAEK 384
+ I W L+ +G ++ A++
Sbjct: 495 DLITWTCLIVGYAKNGLLEDAQR 517
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 191/411 (46%), Gaps = 45/411 (10%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
IH+ +T H N L++G + +G ++ A +FD++ + D F WNTMI + N
Sbjct: 20 IHSYADRTKLHSN-LLLGDL-------SKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 67 TNQ-----------PEKAVLFYKRMQQG------------------EPHVVPDTFTFSFL 97
+ + P K + + + G + P+ +T +
Sbjct: 72 SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 98 LKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML-NKD 156
L++ L ++ G+Q+H T+K G + +V N L+ MY K I A LFE M K+
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
V W S++ G +A++ F + + G + + TF L+AC ++ A G VH
Sbjct: 192 NVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHC 251
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
CI ++ + I V ++L+DMYAKC +E A + M+ +V+SWN+MI+G G
Sbjct: 252 CIVKSGFKTNIY-VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIG 310
Query: 277 EALTLFAEMLQENVVRPDGITFLGVL-C-ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
EAL++F M E ++ D T +L C A S + I+ Y V +
Sbjct: 311 EALSMFGRM-HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN- 368
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV 385
+VD+ + G+++ A + + M +E + I W +L+ +G+ A K+
Sbjct: 369 -ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKL 417
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 226/407 (55%), Gaps = 31/407 (7%)
Query: 34 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
+ +G+++ A VFD++ + DA WN +I + A + M P P ++
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM----PLKSPASW- 235
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLG-------VENHAHVRNSLIHMYGVMKDIETAH 146
++++G ++C +KL + + ++I Y + D+++A
Sbjct: 236 ------------NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAE 283
Query: 147 QLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ--SGMRPDDATFVVTLSACGA 204
+LF M KD + ++++I C GK +AL F +M++ S ++PD+ T +SA
Sbjct: 284 ELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
Query: 205 MGALAFGRWVHSCI-QRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWN 263
+G +FG WV S I + + ++ +S SL+D+Y K G +A+++F ++ K+ +S++
Sbjct: 344 LGNTSFGTWVESYITEHGIKIDDL--LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYS 401
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
MI+G +G TEA +LF M+ E + P+ +TF G+L A SH G V EG + F+ M +
Sbjct: 402 AMIMGCGINGMATEANSLFTAMI-EKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-K 459
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAE 383
D+N++P+ HYG MVD+LGRAG +EEAY LIK+MPM+ NA VW +LL A H NV+ E
Sbjct: 460 DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGE 519
Query: 384 KVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKK 430
H ++LE + LA +Y+S G+W++ R S++E+ + K
Sbjct: 520 IACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCK 566
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 208/470 (44%), Gaps = 43/470 (9%)
Query: 1 MNHLKEIHARIYQTGF-HQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
+ K++HA++ + H ++V + + F + Y + + D+F W
Sbjct: 16 LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTK-EFSRNIVTYVKRILKGFNGHDSFSWGC 74
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
++R + ++ V Y M + P + + +L+ G + ++V GK +H LK
Sbjct: 75 LVRFLSQHRKFKETVDVYIDMHNSG--IPPSSHAVTSVLRACGKMENMVDGKPIHAQALK 132
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G+ +V+ L+ +Y + IE A + F+++ K+ V+WNS++ + G+ +EA
Sbjct: 133 NGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRV 192
Query: 180 FTRMVQSGMRPDDATFVVTLS----------ACGAMGALAF----------GRWVHSCIQ 219
F ++ + D ++ + +S AC A+ G +V+ C +
Sbjct: 193 FDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVN-CRE 247
Query: 220 RA---TYLGEITSVSN----SLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
TY + + +++ Y K G V+ A E+FR M K+ + ++ MI +
Sbjct: 248 MKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 307
Query: 273 GNGTEALTLFAEMLQEN-VVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTV 331
G +AL LFA+ML+ N ++PD IT V+ A S G G + + ++ ++
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKIDD 366
Query: 332 KHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
++DL + G +A+ + N+ + + + + +++ C +G A + ++E
Sbjct: 367 LLSTSLIDLYMKGGDFAKAFKMFSNLNKK-DTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Query: 392 LE-PCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGL 440
+ P + + L + Y+ +G E K SM++ + EP G+
Sbjct: 426 KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL---EPSADHYGI 472
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 186/320 (58%), Gaps = 3/320 (0%)
Query: 109 LGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLV 168
+G LH +K G+ V N LI MY D+ET LFE++ L++WNS+I V
Sbjct: 365 IGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCV 424
Query: 169 CCGKYNEALDFFTRMVQSG-MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI 227
G+ + A + F +M+ +G + PD T L+ C + L G+ +H R + E
Sbjct: 425 QSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENE- 483
Query: 228 TSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQ 287
V +L+DMYAKCG +A +F+S+K +WN+MI G + G AL+ + EM +
Sbjct: 484 NFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM-R 542
Query: 288 ENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLV 347
E ++PD ITFLGVL AC+HGGFVDEG+ F M +++ + PT++HY MV LLGRA L
Sbjct: 543 EKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLF 602
Query: 348 EEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMY 407
EA LI M ++ ++ VW +LL+AC H +++ E V + + L+ + YVL++N+Y
Sbjct: 603 TEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLY 662
Query: 408 ASTGQWNEMSKERRSMQERG 427
A+ W+++ + R M++ G
Sbjct: 663 ATEAMWDDVVRVRNMMKDNG 682
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 6/221 (2%)
Query: 87 VVPDTFTFS-FLLKIVGGLGSVVLG-KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIET 144
+ P+ FT S FL S L +Q+ K G++ +V+ SL+++Y + +
Sbjct: 44 LTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTS 103
Query: 145 AHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGA 204
A LF+EM +D V WN++I G +A F M+Q G P T V L CG
Sbjct: 104 AQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQ 163
Query: 205 MGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNT 264
G ++ GR VH ++ L + V N+L+ Y+KC + A +FR MK K+ +SWNT
Sbjct: 164 CGFVSQGRSVHGVAAKSG-LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNT 222
Query: 265 MILGLASHGNGTEALTLFAEMLQENV-VRPDGITFLGVLCA 304
MI + G EA+T+F M ++NV + P +T + +L A
Sbjct: 223 MIGAYSQSGLQEEAITVFKNMFEKNVEISP--VTIINLLSA 261
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 165/377 (43%), Gaps = 15/377 (3%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFG-NTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
G + A +FD + + D +WN +I G+ N + + LF +QQG P T
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQG---FSPSATTLV 155
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
LL G G V G+ +H K G+E + V+N+LI Y ++ +A LF EM +K
Sbjct: 156 NLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDK 215
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
V+WN++I G EA+ F M + + T + LSA + L H
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------H 269
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
+ + + +I SV SLV Y++CG + A ++ S K +++ +++ A G+
Sbjct: 270 CLVVKCGMVNDI-SVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
A+ F++ Q ++ D + +G+L C +D G + T+ G
Sbjct: 329 DIAVVYFSKTRQL-CMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNG 387
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPC 395
++ + + VE L + + E I W S+++ C G A +V H + L
Sbjct: 388 -LITMYSKFDDVETVLFLFEQLQ-ETPLISWNSVISGCVQSGRASTAFEVF-HQMMLTGG 444
Query: 396 HSSDYVLLANMYASTGQ 412
D + +A++ A Q
Sbjct: 445 LLPDAITIASLLAGCSQ 461
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 6/208 (2%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
+H ++G LVV +I + D+ + +F+++ + WN++I G
Sbjct: 368 SLHGYAIKSGLCTKTLVVNGLITMYS---KFDDVETVLFLFEQLQETPLISWNSVISGCV 424
Query: 66 NTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ + A +F++ M G ++PD T + LL L + LGK+LH TL+ EN
Sbjct: 425 QSGRASTAFEVFHQMMLTG--GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN 482
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V +LI MY + A +F+ + WNS+I G + AL + M
Sbjct: 483 ENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMR 542
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGR 212
+ G++PD+ TF+ LSAC G + G+
Sbjct: 543 EKGLKPDEITFLGVLSACNHGGFVDEGK 570
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 14/245 (5%)
Query: 153 LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGR 212
L +DL ++S++ + + + F +++S + P+ T + L A +F
Sbjct: 9 LYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQA----TTTSFNS 64
Query: 213 WVHSCIQRATYLGE-----ITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMIL 267
+ Q T+L + V SL+++Y K G V A +F M ++ + WN +I
Sbjct: 65 FKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 268 GLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRD-YN 326
G + +G +A LF MLQ+ P T + +L C GFV +GR + ++
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLE 183
Query: 327 VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVR 386
+ VK+ ++ + + A +L + M + + + W +++ A G + A V
Sbjct: 184 LDSQVKN--ALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGAYSQSGLQEEAITVF 240
Query: 387 KHLLE 391
K++ E
Sbjct: 241 KNMFE 245
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 225/440 (51%), Gaps = 11/440 (2%)
Query: 5 KEIHARIYQTGFHQN-HLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
+ +H +I +TGF + HL I ++ + G + V + + D W MI G
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMY----LKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ EKA++ + M Q + + + ++ LGS LG +H L+ G
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAI--ASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
NSLI MY ++ + +FE M +DLV+WN+II +AL F M
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 184 -VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
++ + D T V L AC + GAL G+ +H CI +++ + V +LVDMY+KCG
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH-CIVIRSFIRPCSLVDTALVDMYSKCG 497
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+E A F S+ K+V+SW +I G HG G AL +++E L + P+ + FL VL
Sbjct: 498 YLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGM-EPNHVIFLAVL 556
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
+CSH G V +G + F M RD+ V+P +H C+VDLL RA +E+A+ K +
Sbjct: 557 SSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPS 616
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
V +L ACR +G ++ + + + ++EL+P + YV L + +A+ +W+++S+
Sbjct: 617 IDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQ 676
Query: 423 MQERGVKKPEPGNSFVGLPG 442
M+ G+KK PG S + + G
Sbjct: 677 MRSLGLKKL-PGWSKIEMNG 695
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 183/358 (51%), Gaps = 9/358 (2%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNT-NQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKI 100
A +FD++++ D WNTMI G+ + N E L Y+ G + PD TF L +
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDG---LRPDQQTFGASLSV 254
Query: 101 VGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAW 160
G + + +G+ LHC +K G + H++ +LI MY E ++++ E + NKD+V W
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 161 NSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQR 220
+I L+ G+ +AL F+ M+QSG +++C +G+ G VH + R
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALT 280
Y + T NSL+ MYAKCG ++++ IF M ++++SWN +I G A + + +AL
Sbjct: 375 HGYTLD-TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALL 433
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDL 340
LF EM + V + D T + +L ACS G + G+ I+ R + ++P +VD+
Sbjct: 434 LFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDM 492
Query: 341 LGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE--LEPCH 396
+ G +E A ++ + + + W L+A HG +A ++ L +EP H
Sbjct: 493 YSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 171/368 (46%), Gaps = 16/368 (4%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
IH ++ GF + + ++ A G + +A VF+ + + D W MI +
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYA---KFGLLAHARKVFEEMRERDVVHWTAMIGCYSR 124
Query: 67 TNQPEKAVLFYKRMQ-QGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+A M+ QG + P T LL+++ G+ + + LH + G +
Sbjct: 125 AGIVGEACSLVNEMRFQG---IKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCD 178
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
V NS++++Y + A LF++M +D+V+WN++I G +E L RM
Sbjct: 179 IAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG 238
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
G+RPD TF +LS G M L GR +H I + + ++ + +L+ MY KCG E
Sbjct: 239 DGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDM-HLKTALITMYLKCGKEE 297
Query: 246 EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV-VRPDGITFLGVLCA 304
+Y + ++ K+V+ W MI GL G +AL +F+EMLQ + + I V+ +
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIA--SVVAS 355
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
C+ G D G + R + ++ + + G ++++ ++ + M E + +
Sbjct: 356 CAQLGSFDLGASVHGYVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLV 413
Query: 365 VWRSLLAA 372
W ++++
Sbjct: 414 SWNAIISG 421
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 162/327 (49%), Gaps = 11/327 (3%)
Query: 87 VVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAH 146
++PDTFTF LLK L + G +H L G + ++ +SL+++Y + A
Sbjct: 42 LLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHAR 101
Query: 147 QLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG 206
++FEEM +D+V W ++I C G EA M G++P T + LS +
Sbjct: 102 KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEIT 161
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMI 266
L + +H + +I +V NS++++Y KC V +A ++F M+ ++++SWNTMI
Sbjct: 162 QL---QCLHDFAVIYGFDCDI-AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMI 217
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDY 325
G AS GN +E L L M + + +RPD TF L ++ GR + I+ +
Sbjct: 218 SGYASVGNMSEILKLLYRM-RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF 276
Query: 326 NVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV 385
+V +K ++ + + G E +Y +++ +P + + + W +++ G + A V
Sbjct: 277 DVDMHLK--TALITMYLKCGKEEASYRVLETIPNK-DVVCWTVMISGLMRLGRAEKALIV 333
Query: 386 RKHLLELEPCHSSDYVLLANMYASTGQ 412
+L+ SS+ + A++ AS Q
Sbjct: 334 FSEMLQSGSDLSSEAI--ASVVASCAQ 358
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
+NS I+ L G + + L F+ M+ + + PD TF L AC ++ L+FG +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
+ + +S+SLV++YAK G + A ++F M+ ++V+ W MI + G EA
Sbjct: 74 VNGFSSDFY-ISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 280 TLFAEMLQENVVRPDGITFLGVL 302
+L EM + ++P +T L +L
Sbjct: 133 SLVNEMRFQG-IKPGPVTLLEML 154
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 224/409 (54%), Gaps = 25/409 (6%)
Query: 37 GDMNYAVSVFDRVDK-PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
GD A +F+ + + W MI+G+G + EKA ++RM P + + +S
Sbjct: 126 GDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM----PFELKNVKAWS 181
Query: 96 FLLKIVGGLGSVVLGKQLHCST--LKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
+L G V +++ + + E +A V + ++ Y + D+ A +F +
Sbjct: 182 VML------GVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
+DLV WN++I G ++A+D F M G PD T LSAC G L GR
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 214 VHSCI-QRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
VHS I R L + VSN+L+DMYAKCG +E A +F S+ ++V N+MI LA H
Sbjct: 296 VHSLINHRGIELNQF--VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIH 353
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
G G EAL +F+ M ++ +PD ITF+ VL AC HGGF+ EG + F M + +V+P VK
Sbjct: 354 GKGKEALEMFSTMESLDL-KPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVK 411
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
H+GC++ LLGR+G ++EAY L+K M ++ N V +LL AC+ H + ++AE+V K ++E
Sbjct: 412 HFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIET 470
Query: 393 EPCHSSDY-----VLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNS 436
++ Y ++N+YA T +W R M++RG++K PG S
Sbjct: 471 AGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKS-PGLS 518
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 48/324 (14%)
Query: 107 VVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSII-- 164
VVLGK LH ++K GV + V +SLI MYG + +A ++F+EM +++ WN++I
Sbjct: 62 VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGG 121
Query: 165 -----DCLVCCGKYNE-------------------------ALDFFTRMVQSGMRPDDAT 194
D ++ G + E A + F RM P +
Sbjct: 122 YMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM------PFELK 175
Query: 195 FVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSL-VDMYAKCGAVEEAYEIFRS 253
V S +G R + + + E + SL + Y + G V EA IF
Sbjct: 176 NVKAWSV--MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYR 233
Query: 254 MKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDE 313
+ ++++ WNT+I G A +G +A+ F M E PD +T +L AC+ G +D
Sbjct: 234 VFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEG-YEPDAVTVSSILSACAQSGRLDV 292
Query: 314 GRRYFDIMS-RDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAA 372
GR +++ R + V + ++D+ + G +E A + +++ + A S+++
Sbjct: 293 GREVHSLINHRGIELNQFVSN--ALIDMYAKCGDLENATSVFESISVRSVACC-NSMISC 349
Query: 373 CRTHGNVKLAEKVRKHL--LELEP 394
HG K A ++ + L+L+P
Sbjct: 350 LAIHGKGKEALEMFSTMESLDLKP 373
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 202/365 (55%), Gaps = 5/365 (1%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G + A+ F+R+ DA +N + +G+ KA YK M+ V PD+ T
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL--HGVCPDSRTMVG 507
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM-LNK 155
+L+ G ++ +K G ++ HV ++LI+M+ + A LF++ K
Sbjct: 508 MLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEK 567
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
V+WN +++ + G+ EA+ F +M +P+ TFV + A + AL G VH
Sbjct: 568 STVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVH 627
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
S + + + + T V NSLVDMYAKCG +E + + F + K ++SWNTM+ A+HG
Sbjct: 628 SSLIQCGFCSQ-TPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLA 686
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
+ A++LF M QEN ++PD ++FL VL AC H G V+EG+R F+ M + ++ V+HY
Sbjct: 687 SCAVSLFLSM-QENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYA 745
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPC 395
CMVDLLG+AGL EA +++ M ++ + VW +LL + R H N+ L+ L++LEP
Sbjct: 746 CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPL 805
Query: 396 HSSDY 400
+ S Y
Sbjct: 806 NPSHY 810
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 166/346 (47%), Gaps = 15/346 (4%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G++ A +F ++ D W+ MI + Q ++A+ ++ M + H+ P+ T +
Sbjct: 349 GELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR--IHIKPNAVTLTS 406
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
+L+ G+ + LGK +HC +K +E+ ++I MY A + FE + KD
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD 466
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
VA+N++ G N+A D + M G+ PD T V L C A G V+
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIF-RSMKGKNVISWNTMILGLASHGNG 275
I + + E V+++L++M+ KC A+ A +F + K+ +SWN M+ G HG
Sbjct: 527 QIIKHGFDSE-CHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQA 585
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHY 334
EA+ F +M E +P+ +TF+ ++ A + + G + ++ + Q V +
Sbjct: 586 EEAVATFRQMKVEK-FQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGN- 643
Query: 335 GCMVDLLGRAGLVEEA---YILIKNMPMECNAIVWRSLLAACRTHG 377
+VD+ + G++E + +I I N + + W ++L+A HG
Sbjct: 644 -SLVDMYAKCGMIESSEKCFIEISNKYI----VSWNTMLSAYAAHG 684
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 161/338 (47%), Gaps = 15/338 (4%)
Query: 45 VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL 104
+FD V P LWN+MIRG+ +A+ F+ M + E + PD ++F+F LK G
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSE-EKGIDPDKYSFTFALKACAGS 113
Query: 105 GSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSII 164
G ++H ++G+E+ ++ +L+ MY +D+ +A Q+F++M KD+V WN+++
Sbjct: 114 MDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMV 173
Query: 165 DCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYL 224
L G + AL F M + D + + A + R +H + +
Sbjct: 174 SGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK--- 230
Query: 225 GEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAE 284
G I + S+ L+DMY C + A +F + K+ SW TM+ A +G E L LF +
Sbjct: 231 GFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF-D 289
Query: 285 MLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP----TVKHYGCMVDL 340
+++ VR + + L A ++ G + +G I DY VQ V ++ +
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKG-----IAIHDYAVQQGLIGDVSVATSLMSM 344
Query: 341 LGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN 378
+ G +E A L N+ + + + W +++A+ G
Sbjct: 345 YSKCGELEIAEQLFINIE-DRDVVSWSAMIASYEQAGQ 381
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 165/360 (45%), Gaps = 11/360 (3%)
Query: 24 GKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQG 83
G I ++C D+ A SVF+ V + D W TM+ + + E+ + + M+
Sbjct: 239 GLIDMYC----NCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNY 294
Query: 84 EPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIE 143
+ V + + L+ +G +V G +H ++ G+ V SL+ MY ++E
Sbjct: 295 D--VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 144 TAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACG 203
A QLF + ++D+V+W+++I G+++EA+ F M++ ++P+ T L C
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 204 AMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWN 263
+ A G+ +H +A E+ + + +++ MYAKCG A + F + K+ +++N
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELET-ATAVISMYAKCGRFSPALKAFERLPIKDAVAFN 471
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGR-RYFDIMS 322
+ G G+ +A ++ M V PD T +G+L C+ G Y I+
Sbjct: 472 ALAQGYTQIGDANKAFDVYKNMKLHGVC-PDSRTMVGMLQTCAFCSDYARGSCVYGQIIK 530
Query: 323 RDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
++ + V H ++++ + + A +L E + + W ++ HG + A
Sbjct: 531 HGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 177/385 (45%), Gaps = 15/385 (3%)
Query: 7 IHARIYQTGFHQNHLVVGKIIV--FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
IH I + G ++ + +G +V +C A D+ A VFD++ D WNTM+ G
Sbjct: 122 IHDLIAEMGL-ESDVYIGTALVEMYC----KARDLVSARQVFDKMHVKDVVTWNTMVSGL 176
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
A+L + M+ + D + L+ V L + + LH +K G
Sbjct: 177 AQNGCSSAALLLFHDMRSCCVDI--DHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF-- 232
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ LI MY D+ A +FEE+ KD +W +++ G + E L+ F M
Sbjct: 233 IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
+R + L A +G L G +H + +G++ SV+ SL+ MY+KCG +
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDV-SVATSLMSMYSKCGEL 351
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCA 304
E A ++F +++ ++V+SW+ MI G EA++LF +M++ + ++P+ +T VL
Sbjct: 352 EIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH-IKPNAVTLTSVLQG 410
Query: 305 CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAI 364
C+ G + + +++ ++ ++ + + G A + +P++ +A+
Sbjct: 411 CA-GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK-DAV 468
Query: 365 VWRSLLAACRTHGNVKLAEKVRKHL 389
+ +L G+ A V K++
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNM 493
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCG 171
Q+H S + G++ H N LI+ Y + + + + +F+ + + +V WNS+I G
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 172 KYNEALDFFTRMV-QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV 230
+ EAL FF M + G+ PD +F L AC G +H I ++ +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVY-I 137
Query: 231 SNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
+LV+MY K + A ++F M K+V++WNTM+ GLA +G + AL LF +M +
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM-RSCC 196
Query: 291 VRPDGITFLGVL-----------CACSHGGFVDEG 314
V D ++ ++ C C HG + +G
Sbjct: 197 VDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
N L++ Y+ + + IF S++ V+ WN+MI G G EAL F M +E +
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 292 RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAY 351
PD +F L AC+ +G R D+++ + ++ V +V++ +A + A
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIA-EMGLESDVYIGTALVEMYCKARDLVSAR 155
Query: 352 ILIKNMPMECNAIVWRSLLAACRTHG 377
+ M ++ + + W ++++ +G
Sbjct: 156 QVFDKMHVK-DVVTWNTMVSGLAQNG 180
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 211/387 (54%), Gaps = 36/387 (9%)
Query: 2 NHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
+ LK+IH +I + + L+V ++I +VS G+ YA VF+++ P F WN MI
Sbjct: 34 SQLKQIHTKIIKHNLTNDQLLVRQLI---SVSSSFGETQYASLVFNQLQSPSTFTWNLMI 90
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
R ++P +A+L + M D FTF F++K S+ LG Q+H +K G
Sbjct: 91 RSLSVNHKPREALLLFILMMISHQSQF-DKFTFPFVIKACLASSSIRLGTQVHGLAIKAG 149
Query: 122 VENHAHVRNSLIH-----------------------------MYGVMKD--IETAHQLFE 150
N +N+L+ +YG++ + +++A +F
Sbjct: 150 FFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFN 209
Query: 151 EMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAF 210
+M +++V+W ++I V + +EA F RM ++P++ T V L A +G+L+
Sbjct: 210 QMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSM 269
Query: 211 GRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLA 270
GRWVH + ++ + + +L+DMY+KCG++++A ++F M+GK++ +WN+MI L
Sbjct: 270 GRWVHDYAHKNGFVLDCF-LGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLG 328
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT 330
HG G EAL+LF EM +E V PD ITF+GVL AC++ G V +G RYF M + Y + P
Sbjct: 329 VHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPI 388
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNM 357
+H CM+ LL +A VE+A L+++M
Sbjct: 389 REHNACMIQLLEQALEVEKASNLVESM 415
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 135/340 (39%), Gaps = 76/340 (22%)
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCC 170
KQ+H +K + N + LI + + + A +F ++ + WN +I L
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 171 GKYNEALDFFTRMVQSGMRP-DDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS 229
K EAL F M+ S D TF + AC A ++ G VH +A + ++
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVF- 155
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
N+L+D+Y KCG + ++F M G++++SW TM+ GL S+ A +F +M N
Sbjct: 156 FQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRN 215
Query: 290 V------------------------------VRPDGITFLGVLCACSH------------ 307
V V+P+ T + +L A +
Sbjct: 216 VVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHD 275
Query: 308 ----GGFV-------------------DEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRA 344
GFV + R+ FD+M ++ + M+ LG
Sbjct: 276 YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ-----GKSLATWNSMITSLGVH 330
Query: 345 GLVEEAYILIKNM----PMECNAIVWRSLLAACRTHGNVK 380
G EEA L + M +E +AI + +L+AC GNVK
Sbjct: 331 GCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVK 370
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 223/443 (50%), Gaps = 23/443 (5%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF- 64
+IH + + N +V ++ A G M A FD + + D WN MI G+
Sbjct: 134 QIHGSVEKGNCAGNLIVRSALLSLYA---RCGKMEEARLQFDSMKERDLVSWNAMIDGYT 190
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
N LF + +G+ PD FTF LL+ + + + +LH +KLG
Sbjct: 191 ANACADTSFSLFQLMLTEGKK---PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSII-------DCLVCCGKYNEAL 177
+ + SL++ Y + A +L E +DL++ ++I +C ++A
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCT------SDAF 301
Query: 178 DFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
D F M++ + D+ L C + ++ GR +H +++ + ++ NSL+DM
Sbjct: 302 DIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 361
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
YAK G +E+A F MK K+V SW ++I G HGN +A+ L+ M E ++P+ +T
Sbjct: 362 YAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER-IKPNDVT 420
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
FL +L ACSH G + G + +D M + ++ +H C++D+L R+G +EEAY LI++
Sbjct: 421 FLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSK 480
Query: 358 P--MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNE 415
+ ++ W + L ACR HGNV+L++ LL +EP +Y+ LA++YA+ G W+
Sbjct: 481 EGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDN 540
Query: 416 MSKERRSMQERGVKKPEPGNSFV 438
R+ M+E G PG S V
Sbjct: 541 ALNTRKLMKESGSCNKAPGYSLV 563
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 188/409 (45%), Gaps = 12/409 (2%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
IH GF N + +I + + GD+ +A +FDR+ K D W MI F
Sbjct: 34 IHGNSITNGFCSNLQLKDMLI---DLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSR 90
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
A+L +K M + + V + FT+ +LK LG + G Q+H S K +
Sbjct: 91 CGYHPDALLLFKEMHRED--VKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNL 148
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
VR++L+ +Y +E A F+ M +DLV+WN++ID + + F M+
Sbjct: 149 IVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTE 208
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
G +PD TF L A + L +H + + G +++ SLV+ Y KCG++
Sbjct: 209 GKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGF-GRSSALIRSLVNAYVKCGSLAN 267
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGT-EALTLFAEMLQENVVRPDGITFLGVLCAC 305
A+++ K ++++S +I G + N T +A +F +M++ + D + +L C
Sbjct: 268 AWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMK-TKMDEVVVSSMLKIC 326
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
+ V GR+ + ++ V ++D+ ++G +E+A + + M E +
Sbjct: 327 TTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRS 385
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYAS--TGQ 412
W SL+A HGN + A + +E E +D L+ + A TGQ
Sbjct: 386 WTSLIAGYGRHGNFEKAIDLYNR-MEHERIKPNDVTFLSLLSACSHTGQ 433
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 222/446 (49%), Gaps = 24/446 (5%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K++H + G H + V +I A +VF+ + + WN+MI F
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL---GSVVLGK------QLHC 115
N +KA+ + RM H F + LL I L +V + QLH
Sbjct: 237 QCCNLGKKAIGVFMRM-----HSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHS 291
Query: 116 STLKLGVENHAHVRNSLIHMYGVM-KDIETAHQLFEEMLN-KDLVAWNSIIDCLVCCGKY 173
T+K G+ V +LI +Y M +D ++LF EM + +D+VAWN II
Sbjct: 292 LTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP- 350
Query: 174 NEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNS 233
A+ F ++ Q + PD TF L AC + +H+ + + +L + T ++NS
Sbjct: 351 ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLAD-TVLNNS 409
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRP 293
L+ YAKCG+++ +F M ++V+SWN+M+ + HG L +F +M + P
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM----DINP 465
Query: 294 DGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYIL 353
D TF+ +L ACSH G V+EG R F M P + HY C++D+L RA EA +
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV 525
Query: 354 IKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL-EPCHSSDYVLLANMYASTGQ 412
IK MPM+ +A+VW +LL +CR HGN +L + L EL EP +S Y+ ++N+Y + G
Sbjct: 526 IKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGS 585
Query: 413 WNEMSKERRSMQERGVKKPEPGNSFV 438
+NE + + M+ V+K EP S+
Sbjct: 586 FNEANLSIKEMETWRVRK-EPDLSWT 610
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 185/409 (45%), Gaps = 29/409 (7%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G++ YA VFD + + + W +I G+ ++ + M H P+ FT S
Sbjct: 110 GNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS---HCFPNEFTLSS 166
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQ---LFEEML 153
+L GKQ+H LKLG+ +V N++I MYG D A++ +FE +
Sbjct: 167 VLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIK 222
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
K+LV WNS+I CC +A+ F RM G+ D AT + S+ L
Sbjct: 223 FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 214 VHSCIQRATY-----LGEITSVSNSLVDMYAK-CGAVEEAYEIFRSMKG-KNVISWNTMI 266
C+Q + L T V+ +L+ +Y++ + Y++F M +++++WN +I
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGII 342
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYN 326
A + + A+ LF ++ QE + PD TF VL AC+ G V R I ++
Sbjct: 343 TAFAVY-DPERAIHLFGQLRQEK-LSPDWYTFSSVLKACA--GLV-TARHALSIHAQVIK 397
Query: 327 ---VQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAE 383
+ TV + ++ + G ++ + +M + + W S+L A HG V
Sbjct: 398 GGFLADTVLN-NSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQVDSIL 455
Query: 384 KVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPE 432
V + +++ P S+ ++ L + + G+ E + RSM E+ P+
Sbjct: 456 PVFQK-MDINP-DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
N LI+MY +I A Q+F+ M +++V+W ++I V G E F+ M+ S
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCF 158
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS--VSNSLVDMYAKC---GAV 244
P++ T L++C G+ VH A LG S V+N+++ MY +C A
Sbjct: 159 PNEFTLSSVLTSC----RYEPGKQVHGL---ALKLGLHCSIYVANAVISMYGRCHDGAAA 211
Query: 245 EEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
EA+ +F ++K KN+++WN+MI G +A+ +F M DG+ F
Sbjct: 212 YEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM------HSDGVGF 259
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
++N L++MYAKCG + A ++F +M +NV+SW +I G GN E LF+ ML
Sbjct: 98 LANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHC 157
Query: 290 VVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR---AGL 346
P+ T VL +C + E + ++ + ++ ++ + GR
Sbjct: 158 F--PNEFTLSSVLTSCRY-----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAA 210
Query: 347 VEEAYILIKNMPMECNAIVWRSLLAA 372
EA+ + + + + N + W S++AA
Sbjct: 211 AYEAWTVFEAIKFK-NLVTWNSMIAA 235
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 237/480 (49%), Gaps = 53/480 (11%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
KEIH+ I + + VG ++ + GD + A F + D WN ++ F
Sbjct: 350 KEIHSYILRHSYLLEDTSVGNALI--SFYARFGDTSAAYWAFSLMSTKDIISWNAILDAF 407
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKI---VGGLGSVVLGKQLHCSTLKLG 121
++ P++ + D+ T LLK V G+G V K++H ++K G
Sbjct: 408 ADS--PKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV---KEVHGYSVKAG 462
Query: 122 V---ENHAHVRNSLIHMYGVMKDIETAHQ------------------------------- 147
+ E + N+L+ Y ++E AH+
Sbjct: 463 LLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQ 522
Query: 148 -LFEEMLNKDLVAWNSIIDCLV--CCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGA 204
LF EM DL W+ ++ CC NEA+ F + GMRP+ T + L C
Sbjct: 523 MLFTEMSTTDLTTWSLMVRIYAESCCP--NEAIGVFREIQARGMRPNTVTIMNLLPVCAQ 580
Query: 205 MGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNT 264
+ +L R H I R LG+I + +L+D+YAKCG+++ AY +F+S ++++ +
Sbjct: 581 LASLHLVRQCHGYIIRGG-LGDI-RLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTA 638
Query: 265 MILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRD 324
M+ G A HG G EAL +++ M + N+ +PD + +L AC H G + +G + +D +
Sbjct: 639 MVAGYAVHGRGKEALMIYSHMTESNI-KPDHVFITTMLTACCHAGLIQDGLQIYDSIRTV 697
Query: 325 YNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEK 384
+ ++PT++ Y C VDL+ R G +++AY + MP+E NA +W +LL AC T+ + L
Sbjct: 698 HGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHS 757
Query: 385 VRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVGLPGIR 444
V HLL+ E + ++VL++NMYA+ +W + + R M+++ +KKP G S++ + G R
Sbjct: 758 VANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKP-AGCSWLEVDGQR 816
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 153/338 (45%), Gaps = 7/338 (2%)
Query: 39 MNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLL 98
M+ +F ++D D +WN ++ G + E F EP P + TF+ +L
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPK--PSSVTFAIVL 129
Query: 99 KIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDI-ETAHQLFEEMLNKDL 157
+ LG GK +H +K G+E V N+L+ MY I A+ F+ + +KD+
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDV 189
Query: 158 VAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG---ALAFGRWV 214
V+WN+II +A F M++ P+ AT L C +M A GR +
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQI 249
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN 274
HS + + ++L V NSLV Y + G +EEA +F M K+++SWN +I G AS+
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCE 309
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
+A LF ++ + V PD +T + +L C+ + G+ + R +
Sbjct: 310 WFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVG 369
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAA 372
++ R G AY M + + I W ++L A
Sbjct: 370 NALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 196/434 (45%), Gaps = 19/434 (4%)
Query: 5 KEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
K +H+ I + G ++ LV ++ ++ D A + FD + D WN +I G
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD---AYTAFDGIADKDVVSWNAIIAG 198
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVL---GKQLHCSTLKL 120
F N A + M + EP P+ T + +L + + + G+Q+H ++
Sbjct: 199 FSENNMMADAFRSFCLMLK-EP-TEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQR 256
Query: 121 G-VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
++ H V NSL+ Y + IE A LF M +KDLV+WN +I ++ +A
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Query: 180 FTRMVQSG-MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
F +V G + PD T + L C + LA G+ +HS I R +YL E TSV N+L+ Y
Sbjct: 317 FHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFY 376
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
A+ G AY F M K++ISWN ++ A + L L +L E + D +T
Sbjct: 377 ARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL-DSVTI 435
Query: 299 LGVLCACSHG---GFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIK 355
L +L C + G V E Y + + + + K ++D + G VE A+ +
Sbjct: 436 LSLLKFCINVQGIGKVKEVHGY-SVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFL 494
Query: 356 NMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNE 415
+ + + SLL+ G+ A+ + E+ + + L+ +YA + NE
Sbjct: 495 GLSERRTLVSYNSLLSGYVNSGSHDDAQML---FTEMSTTDLTTWSLMVRIYAESCCPNE 551
Query: 416 MSKERRSMQERGVK 429
R +Q RG++
Sbjct: 552 AIGVFREIQARGMR 565
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 11/288 (3%)
Query: 90 DTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLF 149
D F ++K + + G+ LH KLG + V S+++MY + ++ ++F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 150 EEMLNKDLVAWNSIIDCL-VCCGKYNEALDFFTRM-VQSGMRPDDATFVVTLSACGAMGA 207
+M + D V WN ++ L V CG+ E + FF M +P TF + L C +G
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGD 137
Query: 208 LAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV-EEAYEIFRSMKGKNVISWNTMI 266
G+ +HS I +A L + T V N+LV MYAK G + +AY F + K+V+SWN +I
Sbjct: 138 SYNGKSMHSYIIKAG-LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS---HGGFVDEGRRYFDIMSR 323
G + + +A F ML+E P+ T VL C+ GR+ + +
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEP-TEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQ 255
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
+Q V +V R G +EEA L M + + + W ++A
Sbjct: 256 RSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVIA 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 11/224 (4%)
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI--TSVSNSLVDMYAKCGA 243
SG D F+ + AC ++ L GR +H C+ + LG I + VS S+++MYAKC
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFK---LGHIACSEVSKSVLNMYAKCRR 71
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+++ ++FR M + + WN ++ GL S G E + F M + +P +TF VL
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGL-SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLV-EEAYILIKNMPMECN 362
C G G+ + + + T+ +V + + G + +AY + + +
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVG-NALVSMYAKFGFIFPDAYTAFDGIA-DKD 188
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANM 406
+ W +++A N +A+ R L L+ +Y +AN+
Sbjct: 189 VVSWNAIIAGFSE--NNMMADAFRSFCLMLKEPTEPNYATIANV 230
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 229/432 (53%), Gaps = 13/432 (3%)
Query: 4 LKEIH--ARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMI 61
L+ IH A + GF Q + G IV AG + A +F + PD LWN MI
Sbjct: 125 LRCIHGIAIVSGLGFDQ---ICGSAIV--KAYSKAGLIVEASKLFCSIPDPDLALWNVMI 179
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
G+G +K + + MQ P+ +T L + +++ +H LK+
Sbjct: 180 LGYGCCGFWDKGINLFNLMQHRGHQ--PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+++H++V +L++MY I +A +F + DLVA +S+I CG + EAL F
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
+ SG +PD + L +C + G+ VHS + R +I V ++L+DMY+KC
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDI-KVCSALIDMYSKC 356
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G ++ A +F + KN++S+N++ILGL HG + A F E+L+ ++ PD ITF +
Sbjct: 357 GLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLI-PDEITFSAL 415
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
LC C H G +++G+ F+ M ++ ++P +HY MV L+G AG +EEA+ + ++
Sbjct: 416 LCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPI 475
Query: 362 NAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDY-VLLANMYASTGQWNEMSKER 420
++ + +LL+ C H N LAE V +++ + S Y V+L+N+YA G+W+E+ + R
Sbjct: 476 DSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLR 535
Query: 421 RSMQER-GVKKP 431
+ E G K P
Sbjct: 536 DGISESYGGKLP 547
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 182/392 (46%), Gaps = 17/392 (4%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++H+ + ++ ++ ++ F A++ D+ A +FD + FLWN++IR +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALN---DDLISARKLFDVFPERSVFLWNSIIRAY 81
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS---TLKLG 121
+Q + + ++ + + PD FT++ L + G K L C + G
Sbjct: 82 AKAHQFTTVLSLFSQILRSDTR--PDNFTYACLAR---GFSESFDTKGLRCIHGIAIVSG 136
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+ ++++ Y I A +LF + + DL WN +I CCG +++ ++ F
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN 196
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAK 240
M G +P+ T V S L VH+ C++ L + V +LV+MY++
Sbjct: 197 LMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLK--INLDSHSYVGCALVNMYSR 254
Query: 241 CGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
C + A +F S+ ++++ +++I G + GN EAL LFAE L+ + +PD +
Sbjct: 255 CMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAE-LRMSGKKPDCVLVAI 313
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
VL +C+ G+ + R ++ +K ++D+ + GL++ A L +P E
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIR-LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-E 371
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
N + + SL+ HG A + +LE+
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEM 403
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 214 bits (545), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 220/405 (54%), Gaps = 15/405 (3%)
Query: 38 DMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFL 97
D A VFD+++ + W MI G E V ++ MQ+ ++ P+ T +
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR--ENLRPNRVTLLSV 257
Query: 98 LKIVGGL--GSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
L L GS ++ K++H + + G + + + MY ++ + LFE +
Sbjct: 258 LPACVELNYGSSLV-KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR 316
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
D+V W+S+I G +E ++ +M + G+ + T + +SAC L+F VH
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
S I + ++ I + N+L+DMYAKCG++ A E+F + K+++SW++MI HG+G
Sbjct: 377 SQILKCGFMSHIL-LGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHG 435
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
+EAL +F M++ D + FL +L AC+H G V+E + F + Y++ T++HY
Sbjct: 436 SEALEIFKGMIKGGH-EVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYA 493
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEK-VRKHLLELEP 394
C ++LLGR G +++A+ + NMPM+ +A +W SLL+AC THG + +A K + L++ EP
Sbjct: 494 CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEP 553
Query: 395 CHSSDYVLLANMYASTGQWNEMSKERRSMQER------GVKKPEP 433
+ ++YVLL+ ++ +G ++ + RR MQ R G K EP
Sbjct: 554 DNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEP 598
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 147/346 (42%), Gaps = 47/346 (13%)
Query: 108 VLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCL 167
+LG QLHC LK G + V NSLI MY ++F+EML++D V++ SII+
Sbjct: 64 LLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS- 122
Query: 168 VCC--GKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA-FGRWVHSCIQRATYL 224
CC G EA+ M G P L+ C MG+ + R H+ + +
Sbjct: 123 -CCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERM 181
Query: 225 GEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAE 284
E +S +LVDMY K A+ +F M+ KN +SW MI G ++ N + LF
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA 241
Query: 285 MLQENVVRPDGITFLGVLCAC------------------SHGGFVDE--GRRYFDIMSRD 324
M +EN +RP+ +T L VL AC HG DE + + R
Sbjct: 242 MQREN-LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRC 300
Query: 325 YNVQPT-----------VKHYGCMVDLLGRAGLVEEAYILIKNMP---MECNAIVWRSLL 370
NV + V + M+ G E L+ M +E N++ +++
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIV 360
Query: 371 AACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLAN----MYASTGQ 412
+AC + A V +L+ C ++LL N MYA G
Sbjct: 361 SACTNSTLLSFASTVHSQILK---CGFMSHILLGNALIDMYAKCGS 403
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 142/297 (47%), Gaps = 19/297 (6%)
Query: 4 LKEIHARIYQTGFHQNH-LVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
+KEIH ++ G H + L + ++C G+++ + +F+ D +W++MI
Sbjct: 271 VKEIHGFSFRHGCHADERLTAAFMTMYC----RCGNVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVL---GKQLHCSTLK 119
G+ T + + +M++ + ++ T LL IV + L +H LK
Sbjct: 327 GYAETGDCSEVMNLLNQMRK--EGIEANSVT---LLAIVSACTNSTLLSFASTVHSQILK 381
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
G +H + N+LI MY + A ++F E+ KDLV+W+S+I+ G +EAL+
Sbjct: 382 CGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEI 441
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNS-LVDMY 238
F M++ G DD F+ LSAC G + + + + Q Y +T + +++
Sbjct: 442 FKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT--QAGKYHMPVTLEHYACYINLL 499
Query: 239 AKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
+ G +++A+E+ +M K + W++++ +HG A + A L ++ PD
Sbjct: 500 GRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKS--EPD 554
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 245/500 (49%), Gaps = 73/500 (14%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++H + + GF N + ++ F S D A VFD + PD WN+++ G+
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLED---AHKVFDEMPDPDVISWNSLVSGY 131
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ + ++ + + + + + V P+ F+F+ L L LG +H +KLG+E
Sbjct: 132 VQSGRFQEGICLFLELHRSD--VFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEK 189
Query: 125 -HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSI-------------------- 163
+ V N LI MYG ++ A +F+ M KD V+WN+I
Sbjct: 190 GNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Query: 164 -----------IDCLVCCGKYN-------------------------------EALDFFT 181
ID V G +N EA +FFT
Sbjct: 250 PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
+M SG+R D+ + + L+A A+ + +G +H+C + L V+++L+DMY+KC
Sbjct: 310 KMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLG-LDSRVVVASALIDMYSKC 368
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G ++ A +F +M KN+I WN MI G A +G+ EA+ LF ++ QE ++PD TFL +
Sbjct: 369 GMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNL 428
Query: 302 LCACSHGGFVDEGRR-YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
L CSH E YF++M +Y ++P+V+H ++ +G+ G V +A +I+
Sbjct: 429 LAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFG 488
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD--YVLLANMYASTGQWNEMSK 418
+ + WR+LL AC ++K A+ V ++EL + Y++++N+YA +W E+ +
Sbjct: 489 YDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQ 548
Query: 419 ERRSMQERGVKKPEPGNSFV 438
R+ M+E GV K E G+S++
Sbjct: 549 IRKIMRESGVLK-EVGSSWI 567
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 14/245 (5%)
Query: 57 WNTMIRG---FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQL 113
W+T++ FG+ AV + + GE PD LL++ G G V L +QL
Sbjct: 24 WSTIVPALARFGSIGVLRAAV---ELINDGEK---PDASPLVHLLRVSGNYGYVSLCRQL 77
Query: 114 HCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKY 173
H K G ++ + NSL+ Y +E AH++F+EM + D+++WNS++ V G++
Sbjct: 78 HGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRF 137
Query: 174 NEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNS 233
E + F + +S + P++ +F L+AC + G +HS + + V N
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNC 197
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRP 293
L+DMY KCG +++A +F+ M+ K+ +SWN ++ + +G L F +M P
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM-----PNP 252
Query: 294 DGITF 298
D +T+
Sbjct: 253 DTVTY 257
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 214/396 (54%), Gaps = 12/396 (3%)
Query: 38 DMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFL 97
D++ A VFD + WN+++ GF + + ++A+ + M Q V D T L
Sbjct: 277 DVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEV--DEVTVVSL 334
Query: 98 LKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDL 157
L++ + K +H ++ G E++ +SLI Y ++ A + + M KD+
Sbjct: 335 LRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDV 394
Query: 158 VAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS- 216
V+ +++I L G+ +EA+ F M + P+ T + L+AC L +W H
Sbjct: 395 VSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGI 451
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
I+R+ + +I SV S+VD YAKCGA+E A F + KN+ISW +I A +G
Sbjct: 452 AIRRSLAINDI-SVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPD 510
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
+AL LF EM Q+ P+ +T+L L AC+HGG V +G F M + + +P+++HY C
Sbjct: 511 KALALFDEMKQKGYT-PNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSC 568
Query: 337 MVDLLGRAGLVEEAYILIKNMP--MECNAIVWRSLLAACRTH-GNVKLAEKVRKHLLELE 393
+VD+L RAG ++ A LIKN+P ++ A W ++L+ CR + + +V +LELE
Sbjct: 569 IVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELE 628
Query: 394 PCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVK 429
P SS Y+L ++ +A+ W +++ RR ++ER V+
Sbjct: 629 PLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVR 664
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 203/449 (45%), Gaps = 56/449 (12%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH + ++GF V I+ A S D A +FD + + D W+ +IR +
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADS----DSLSARKLFDEMSERDVISWSVVIRSY 200
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE- 123
+ +P + +K M E PD T + +LK + + +G+ +H +++ G +
Sbjct: 201 VQSKEPVVGLKLFKEMVH-EAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL 259
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
V NSLI MY D+++A ++F+E +++V+WNSI+ V +Y+EAL+ F M
Sbjct: 260 ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
VQ + D+ T V L C + +H I R Y ++S SL+D Y C
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALS-SLIDAYTSCSL 378
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
V++A + SM K+V+S +TMI GLA G EA+++F M P+ IT + +L
Sbjct: 379 VDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLN 434
Query: 304 ACS-----------HG-------------------------GFVDEGRRYFDIMSRDYNV 327
ACS HG G ++ RR FD ++ +
Sbjct: 435 ACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNII 494
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME---CNAIVWRSLLAACRTHGNVKLAEK 384
TV ++ GL ++A L M + NA+ + + L+AC G VK
Sbjct: 495 SWTV-----IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLM 549
Query: 385 VRKHLLELEPCHS-SDYVLLANMYASTGQ 412
+ K ++E + S Y + +M + G+
Sbjct: 550 IFKSMVEEDHKPSLQHYSCIVDMLSRAGE 578
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 39/379 (10%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
GD+ + FD ++ D+ WN ++ G + E+ + ++ +++ P+T T
Sbjct: 75 GDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE--PNTSTLVL 132
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
++ L G+++H ++ G + V+NS++ MY D +A +LF+EM +D
Sbjct: 133 VIHACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCMYA-DSDSLSARKLFDEMSERD 189
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMV-QSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
+++W+ +I V + L F MV ++ PD T L AC M + GR VH
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVH 249
Query: 216 S-CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN 274
I+R L ++ V NSL+DMY+K V+ A+ +F +N++SWN+++ G +
Sbjct: 250 GFSIRRGFDLADVF-VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQR 308
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVL-----------CACSHGGFVDEGRRYFDI--- 320
EAL +F M+QE V D +T + +L C HG + G ++
Sbjct: 309 YDEALEMFHLMVQE-AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALS 367
Query: 321 -MSRDYNVQPTVKHYGCMVDL---------------LGRAGLVEEAYILIKNMPMECNAI 364
+ Y V G ++D L AG +EA + +M NAI
Sbjct: 368 SLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAI 427
Query: 365 VWRSLLAACRTHGNVKLAE 383
SLL AC +++ ++
Sbjct: 428 TVISLLNACSVSADLRTSK 446
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 7/243 (2%)
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
NS+ Y D+ + + F+ M ++D V+WN I+ L+ G E L +F+++ G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 190 PDDATFVVTLSACGAMGALAF-GRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAY 248
P+ +T V+ + AC +L F G +H + R+ + G I+SV NS++ MYA ++ A
Sbjct: 125 PNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCG-ISSVQNSILCMYADSDSL-SAR 179
Query: 249 EIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
++F M ++VISW+ +I L LF EM+ E PD +T VL AC+
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 309 GFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRS 368
+D GR R V ++D+ + V+ A+ + N + W S
Sbjct: 240 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWNS 298
Query: 369 LLA 371
+LA
Sbjct: 299 ILA 301
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 226/444 (50%), Gaps = 50/444 (11%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
KE+ + F + ++ ++ A G + A VFD + D LWNT++ +
Sbjct: 395 KEVQCYCIRHSFESDIVLASTVMDMYA---KCGSIVDAKKVFDSTVEKDLILWNTLLAAY 451
Query: 65 GNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ +A+ LFY +G P P+ T++ ++ S L+ G
Sbjct: 452 AESGLSGEALRLFYGMQLEGVP---PNVITWNLII----------------LSLLRNG-- 490
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGKYNEALDF 179
++ A +F +M + +L++W ++++ +V G EA+ F
Sbjct: 491 -----------------QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILF 533
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
+M +SG+RP+ + V LSAC + +L GR +H I R + S+ SLVDMYA
Sbjct: 534 LRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYA 593
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENV-VRPDGITF 298
KCG + +A ++F S + N MI A +GN EA+ L+ + E V ++PD IT
Sbjct: 594 KCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL--EGVGLKPDNITI 651
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
VL AC+H G +++ F + +++P ++HYG MVDLL AG E+A LI+ MP
Sbjct: 652 TNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP 711
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSK 418
+ +A + +SL+A+C +L + + + LLE EP +S +YV ++N YA G W+E+ K
Sbjct: 712 FKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVK 771
Query: 419 ERRSMQERGVKKPEPGNSFVGLPG 442
R M+ +G+KK +PG S++ + G
Sbjct: 772 MREMMKAKGLKK-KPGCSWIQITG 794
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 186/389 (47%), Gaps = 14/389 (3%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFS 95
G ++ A VFD + +A WN ++ G+ + E+A+ + M +QG V P T S
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG---VEPTRVTVS 278
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
L +G V GKQ H + G+E + SL++ Y + IE A +F+ M K
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
D+V WN II V G +A+ M ++ D T +SA L G+ V
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
R ++ +I ++++++DMYAKCG++ +A ++F S K++I WNT++ A G
Sbjct: 399 CYCIRHSFESDIV-LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLS 457
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
EAL LF M E V P+ IT+ ++ + G VDE + F + + + P + +
Sbjct: 458 GEALRLFYGMQLEG-VPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWT 515
Query: 336 CMVDLLGRAGLVEEAYILIKNMP---MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
M++ + + G EEA + ++ M + NA L+AC ++ + + +++
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR- 574
Query: 393 EPCHSSDYVL---LANMYASTGQWNEMSK 418
HSS + L +MYA G N+ K
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKAEK 603
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 182/376 (48%), Gaps = 13/376 (3%)
Query: 5 KEIHARIYQTG--FHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
K+IHARI + G + +N + K+++F A + A +F ++ + F W +I
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYA---KCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
E A++ + M + E + PD F + K G L G+ +H +K G+
Sbjct: 147 VKCRIGLCEGALMGFVEMLENE--IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL 204
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
E+ V +SL MYG ++ A ++F+E+ +++ VAWN+++ V GK EA+ F+
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAKC 241
M + G+ P T LSA MG + G+ H+ I L I + SL++ Y K
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI--LGTSLLNFYCKV 322
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G +E A +F M K+V++WN +I G G +A+ + ++++ ++ D +T +
Sbjct: 323 GLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATL 381
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
+ A + + G+ R ++ + + ++D+ + G + +A + + +E
Sbjct: 382 MSAAARTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEK 439
Query: 362 NAIVWRSLLAACRTHG 377
+ I+W +LLAA G
Sbjct: 440 DLILWNTLLAAYAESG 455
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 8/226 (3%)
Query: 171 GKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCI-QRATYLGEITS 229
G+ EAL T M +R + L C L+ G+ +H+ I + +
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEY 108
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
+ LV YAKC A+E A +F ++ +NV SW +I G AL F EML EN
Sbjct: 109 IETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEML-EN 167
Query: 290 VVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEE 349
+ PD V AC + GR + + ++ V + D+ G+ G++++
Sbjct: 168 EIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GLEDCVFVASSLADMYGKCGVLDD 226
Query: 350 AYILIKNMPMECNAIVWRSLLAACRTHGN----VKLAEKVRKHLLE 391
A + +P + NA+ W +L+ +G ++L +RK +E
Sbjct: 227 ASKVFDEIP-DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 221/434 (50%), Gaps = 19/434 (4%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K++H+ + ++G++ +++ V ++V GD++ ++ F+ V + D WN+++
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLV--DYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVC 290
Query: 65 GNTNQPEKAVLFYKRMQ--QGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
+ ++ + +MQ P + P F L + GKQ+HC LK+G
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRP----FMSFLNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 123 E-NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+ + HV+++LI MYG IE + L++ + +L NS++ L+ CG + ++ F
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFG 406
Query: 182 RMVQSGMRPDDATFVVTLSACGAM--GALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
M+ G D+ T L A +L VH C ++ Y ++ +VS SL+D Y
Sbjct: 407 LMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADV-AVSCSLIDAYT 465
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
K G E + ++F + N+ ++I G A +G GT+ + + EM + N++ PD +T L
Sbjct: 466 KSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLI-PDEVTIL 524
Query: 300 GVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
VL CSH G V+EG FD + Y + P K Y CMVDLLGRAGLVE+A L+
Sbjct: 525 SVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARG 584
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTG------QW 413
+ + + W SLL +CR H N + + + L+ LEP + + Y+ ++ Y G Q
Sbjct: 585 DADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQI 644
Query: 414 NEMSKERRSMQERG 427
E++ R M+E G
Sbjct: 645 REIAASRELMREIG 658
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 165/341 (48%), Gaps = 8/341 (2%)
Query: 34 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
+ +G++ A FD + D +N +I G +A+ Y M + T
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS--CGLRESAST 114
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
F +L + G Q+HC + LG + VR++L+ +Y ++ ++ A +LF+EML
Sbjct: 115 FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW 213
+++L N ++ C G+ + + RM G+ + T+ + C + G+
Sbjct: 175 DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG 273
+HS + ++ + V+N LVD Y+ CG + + F ++ K+VISWN+++ A +G
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 274 NGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR-YFDIMSRDYNVQPTVK 332
+ ++L LF++M Q RP F+ L CS + G++ + ++ ++V ++
Sbjct: 295 SVLDSLDLFSKM-QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVS-SLH 352
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMP---MECNAIVWRSLL 370
++D+ G+ +E + +L +++P +EC + SL+
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLM 393
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 195/417 (46%), Gaps = 49/417 (11%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
++IH + + G ++ +I F A G++ + FD + + WN ++ G+
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYA---KCGNLEDSRLCFDYIRDKNIVCWNALLSGY 392
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
N + P LF + +Q G P +TFS LK V +QLH +++G E+
Sbjct: 393 ANKDGPICLSLFLQMLQMG---FRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYED 445
Query: 125 HAHVRNSLIHMYG---VMKD-----------------------------IETAHQLFEEM 152
+ +V +SL+ Y +M D + +L +
Sbjct: 446 NDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTL 505
Query: 153 LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGR 212
D V+WN I + E ++ F M+QS +RPD TFV LS C + L G
Sbjct: 506 EQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGS 565
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
+H I + + T V N L+DMY KCG++ ++F + KN+I+W +I L H
Sbjct: 566 SIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIH 625
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVK 332
G G EAL F E L +PD ++F+ +L AC HGG V EG F M +DY V+P +
Sbjct: 626 GYGQEALEKFKETLSLG-FKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMD 683
Query: 333 HYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHL 389
HY C VDLL R G ++EA LI+ MP +A VWR+ L C + AE+ R L
Sbjct: 684 HYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN-----RFAEEQRNTL 735
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 7/268 (2%)
Query: 39 MNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLL 98
+ A VF+ + WN M+ G+ ++ + F++ + + + +F +L
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLG--VL 222
Query: 99 KIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLV 158
K V + + + KQLHCS K G++ V NSLI YG + A ++F++ + D+V
Sbjct: 223 KGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIV 282
Query: 159 AWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS-C 217
+WN+II +AL F M + G P+ T+V L + L+ GR +H
Sbjct: 283 SWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML 342
Query: 218 IQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTE 277
I+ G + + N+L+D YAKCG +E++ F ++ KN++ WN ++ G A+ +G
Sbjct: 343 IKNGCETGIV--LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPI 399
Query: 278 ALTLFAEMLQENVVRPDGITFLGVLCAC 305
L+LF +MLQ RP TF L +C
Sbjct: 400 CLSLFLQMLQMG-FRPTEYTFSTALKSC 426
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 159/337 (47%), Gaps = 9/337 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G+++ A VFD++ + + +NT+I+G+ +KA + M+ +P+ T S
Sbjct: 63 GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF--GYLPNQSTVSG 120
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGV-ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
LL V G QLH +LK G+ A V L+ +YG + +E A Q+FE+M K
Sbjct: 121 LLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
L WN ++ L G E + FF +V+ G +++F+ L + L + +H
Sbjct: 179 SLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLH 238
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
+ EI SV NSL+ Y KCG A +F+ +++SWN +I A N
Sbjct: 239 CSATKKGLDCEI-SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENP 297
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
+AL LF M E+ P+ T++ VL S + GR+ ++ ++ + +
Sbjct: 298 LKALKLFVSM-PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGN 355
Query: 336 CMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAA 372
++D + G +E++ + + + N + W +LL+
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYI-RDKNIVCWNALLSG 391
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 178/422 (42%), Gaps = 49/422 (11%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K++H + G VV +I + G+ + A +F D WN +I
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLI---SAYGKCGNTHMAERMFQDAGSWDIVSWNAIICAT 291
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ P KA+ + M E P+ T+ +L + + + G+Q+H +K G E
Sbjct: 292 AKSENPLKALKLFVSMP--EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE----ALDFF 180
+ N+LI Y ++E + F+ + +K++V WN+++ G N+ L F
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLS-----GYANKDGPICLSLF 404
Query: 181 TRMVQSGMRPDDATFVVTLSAC-------------------------GAMGALAFGRWVH 215
+M+Q G RP + TF L +C M + A + ++
Sbjct: 405 LQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMN 464
Query: 216 SCIQRATYLGEITSVS--NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHG 273
+ + TSV N + +Y++ G E+ ++ +++ + +SWN I +
Sbjct: 465 DALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSD 524
Query: 274 NGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR-DYNVQPTVK 332
E + LF MLQ N +RPD TF+ +L CS + G ++++ D++ T
Sbjct: 525 YHEEVIELFKHMLQSN-IRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT-- 581
Query: 333 HYGC--MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
+ C ++D+ G+ G + + + E N I W +L++ HG + A + K L
Sbjct: 582 -FVCNVLIDMYGKCGSIRSVMKVFEE-TREKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 391 EL 392
L
Sbjct: 640 SL 641
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 196 VVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM 254
V L+ C + A + +H+ I + L + V N+++ +Y K G V A ++F M
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 255 KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEG 314
+N +S+NT+I G + +G+ +A +F+EM + P+ T G+L S V G
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL-PNQSTVSGLLSCASLD--VRAG 132
Query: 315 RRYFDIMSRDYNVQPTVKHYG-CMVDLLGRAGLVEEAYILIKNMPME 360
+ +S Y + G C++ L GR L+E A + ++MP +
Sbjct: 133 TQLHG-LSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 224/487 (45%), Gaps = 50/487 (10%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++H + + GF + V +I + ++ A VFD + + D WN+MI G+
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITY---YTKCDNIESARKVFDEMSERDVVSWNSMISGY 208
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ E YK M P+ T + + G ++ G ++H K +EN
Sbjct: 209 SQSGSFEDCKKMYKAMLACSD-FKPNGVTVISVFQACGQSSDLIFGLEVH----KKMIEN 263
Query: 125 HAHVR----NSLIHMYGVMKDIETAHQLFEEMLNKD------------------------ 156
H + N++I Y ++ A LF+EM KD
Sbjct: 264 HIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALF 323
Query: 157 -------LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA 209
L WN++I L+ + E ++ F M++ G RP+ T L + L
Sbjct: 324 SEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLK 383
Query: 210 FGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGL 269
G+ +H+ R I V+ S++D YAK G + A +F + K +++I+W +I
Sbjct: 384 GGKEIHAFAIRNGADNNIY-VTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAY 442
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
A HG+ A +LF +M Q +PD +T VL A +H G D + FD M Y+++P
Sbjct: 443 AVHGDSDSACSLFDQM-QCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEP 501
Query: 330 TVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHL 389
V+HY CMV +L RAG + +A I MP++ A VW +LL G++++A L
Sbjct: 502 GVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRL 561
Query: 390 LELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV----GLPGIRL 445
E+EP ++ +Y ++AN+Y G+W E R M+ G+KK PG S++ GL
Sbjct: 562 FEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKI-PGTSWIETEKGLRSFIA 620
Query: 446 ENETAER 452
++ + ER
Sbjct: 621 KDSSCER 627
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 184/417 (44%), Gaps = 50/417 (11%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
H+ ++HARI ++ + K+I F A+ VFD + +AF +N ++
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISF---YTRQDRFRQALHVFDEITVRNAFSYNALLI 96
Query: 63 GFGNTNQPEKAV-LFYKRMQQG---EPHVVPDTFTFSFLLKIVGGLGSVVLG---KQLHC 115
+ + A LF + PD+ + S +LK + G LG +Q+H
Sbjct: 97 AYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHG 156
Query: 116 STLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNE 175
++ G ++ V N +I Y +IE+A ++F+EM +D+V+WNS+I G + +
Sbjct: 157 FVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 176 ALDFFTRMVQ-SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSL 234
+ M+ S +P+ T + ACG L FG VH + ++ S+ N++
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE-NHIQMDLSLCNAV 275
Query: 235 VDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEM--------- 285
+ YAKCG+++ A +F M K+ +++ +I G +HG EA+ LF+EM
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
Query: 286 ------LQEN----VV-----------RPDGITFLGVLCACSHGGFVDEGRRYFDIMSR- 323
+Q N V+ RP+ +T +L + ++ + G+ R
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN 395
Query: 324 --DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN 378
D N+ T ++D + G + A + N + + I W +++ A HG+
Sbjct: 396 GADNNIYVTTS----IIDNYAKLGFLLGAQRVFDNCK-DRSLIAWTAIITAYAVHGD 447
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 12/280 (4%)
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCG 171
QLH + ++ + + LI Y A +F+E+ ++ ++N+++
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 172 KYNEALDFFTRMVQS------GMRPDDATF---VVTLSACGAMGALAFGRWVHSCIQRAT 222
Y +A F + S RPD + + LS C + R VH + R
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 223 YLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLF 282
+ ++ V N ++ Y KC +E A ++F M ++V+SWN+MI G + G+ + ++
Sbjct: 163 FDSDVF-VGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLG 342
ML + +P+G+T + V AC + G M ++ +Q + ++
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYA 280
Query: 343 RAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
+ G ++ A L M E +++ + ++++ HG VK A
Sbjct: 281 KCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGLVKEA 319
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 214/422 (50%), Gaps = 38/422 (9%)
Query: 37 GDMNYAVSVFDR-VDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
GD++ A+SVF R + D WNT+I G+ E+A+ M+ E + D +F
Sbjct: 207 GDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME--ENGLKWDEHSFG 264
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMY---GVMKDIETAH------ 146
+L ++ L S+ +GK++H LK G ++ V + ++ +Y G MK E+AH
Sbjct: 265 AVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFG 324
Query: 147 ----------------------QLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+LF+ + K+LV W ++ + + + L+ +
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 185 QSGMR-PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
+ PD V L AC + G+ +H R L + V+ + VDMY+KCG
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT-AFVDMYSKCGN 443
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
VE A IF S ++ + +N MI G A HG+ ++ F +M E +PD ITF+ +L
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM-TEGGFKPDEITFMALLS 502
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP-MECN 362
AC H G V EG +YF M YN+ P HY CM+DL G+A +++A L++ + +E +
Sbjct: 503 ACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKD 562
Query: 363 AIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRS 422
A++ + L AC + N +L ++V + LL +E + S Y+ +AN YAS+G+W+EM + R
Sbjct: 563 AVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQ 622
Query: 423 MQ 424
M+
Sbjct: 623 MR 624
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 165/395 (41%), Gaps = 74/395 (18%)
Query: 53 DAFLWNTMIRGFGNTNQPE-KAVLFYKRMQQGEPH-VVPDTFTFSFLLKIVGGLGSVVLG 110
D +NT++ GF T+ E +A+ + M + E + D FT + ++K+ L +V G
Sbjct: 85 DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMY---GVMK--------------------------- 140
+QLH +K G + +SLIHMY G K
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYC 204
Query: 141 ---DIETAHQLF--EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATF 195
DI+ A +F LN D ++WN++I G EAL M ++G++ D+ +F
Sbjct: 205 REGDIDKALSVFWRNPELN-DTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 196 VVTLSACGAMGALAFGRWVHS-CIQRATYLGEITSVSNSLVDMYAKCGAVE--------- 245
L+ ++ +L G+ VH+ ++ +Y + VS+ +VD+Y KCG ++
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKF--VSSGIVDVYCKCGNMKYAESAHLLY 321
Query: 246 ----------------------EAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
EA +F S+ KN++ W M LG + L L
Sbjct: 322 GFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELAR 381
Query: 284 EMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
+ PD + + VL ACS +++ G+ R + K VD+ +
Sbjct: 382 AFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAFVDMYSK 440
Query: 344 AGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN 378
G VE A I + E + +++ +++A C HG+
Sbjct: 441 CGNVEYAE-RIFDSSFERDTVMYNAMIAGCAHHGH 474
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 43/347 (12%)
Query: 5 KEIHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVS------------------- 44
KE+HAR+ + G + N V I+ V+C G+M YA S
Sbjct: 280 KEVHARVLKNGSYSNKFVSSGIVDVYC----KCGNMKYAESAHLLYGFGNLYSASSMIVG 335
Query: 45 ------------VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTF 92
+FD + + + +W M G+ N QP+ + + E + PD+
Sbjct: 336 YSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN-TPDSL 394
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM 152
+L + GK++H +L+ G+ + + + MY ++E A ++F+
Sbjct: 395 VMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSS 454
Query: 153 LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGR 212
+D V +N++I G ++ F M + G +PD+ TF+ LSAC G + G
Sbjct: 455 FERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGE 514
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
+ A + T ++D+Y K +++A E+ M+G + + + +ILG +
Sbjct: 515 KYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIEL---MEGIDQVEKDAVILGAFLN 571
Query: 273 GNGTEALTLFAEMLQENVV---RPDGITFLGVLCACSHGGFVDEGRR 316
T + ++E ++ +G ++ + A + G DE +R
Sbjct: 572 ACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQR 618
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 215/409 (52%), Gaps = 16/409 (3%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G + +V VF+ V++ D WN ++ GF + ++A+ + M + + FT S
Sbjct: 133 GHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI--SEFTLSS 190
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM-LNK 155
++K L + GKQ+H + G + + ++I Y + I A +++ + ++
Sbjct: 191 VVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHT 249
Query: 156 DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH 215
D V NS+I + Y EA +R RP+ +L+ C L G+ +H
Sbjct: 250 DEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIH 304
Query: 216 SCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNG 275
R ++ + + + N L+DMY KCG + +A IFR++ K+V+SW +MI A +G+G
Sbjct: 305 CVALRNGFVSD-SKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDG 363
Query: 276 TEALTLFAEMLQENV-VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
+AL +F EM +E V P+ +TFL V+ AC+H G V EG+ F +M Y + P +HY
Sbjct: 364 VKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHY 423
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPMECN----AIVWRSLLAACRTHGNVKLAEKVRKHLL 390
C +D+L +AG EE + L++ M N +W ++L+AC + ++ E V + L+
Sbjct: 424 VCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLM 483
Query: 391 -ELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
E P ++S YVL++N YA+ G+W+ + + R ++ +G+ K + F+
Sbjct: 484 EETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSLFI 532
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 156/350 (44%), Gaps = 14/350 (4%)
Query: 40 NYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLK 99
+A +FD + + D N+ + + P + + ++ + P + TFT +L
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTP--VLG 92
Query: 100 IVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVA 159
L G+Q+H +K G E + +LI MY + + ++FE + KDLV+
Sbjct: 93 ACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVS 152
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
WN+++ + GK EAL F M + + + T + C ++ L G+ VH+ +
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV- 211
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMK-GKNVISWNTMILGLASHGNGTEA 278
++ + +++ Y+ G + EA +++ S+ + + N++I G + N EA
Sbjct: 212 -VVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA 270
Query: 279 LTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV 338
L + RP+ L CS + G++ + R+ V + G M
Sbjct: 271 FLLMSRQ------RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLM- 323
Query: 339 DLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN-VKLAEKVRK 387
D+ G+ G + +A + + +P + + + W S++ A +G+ VK E R+
Sbjct: 324 DMYGKCGQIVQARTIFRAIPSK-SVVSWTSMIDAYAVNGDGVKALEIFRE 372
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 203/430 (47%), Gaps = 37/430 (8%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQG--EPHVVP-DTFT 93
G ++ A +FDR+ + DA WN +I + + + +A RM E +V +T
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 94 FSFL------------------------------LKIVGGLGSVVLGKQLHCSTLKLGVE 123
L LK +G++ GK HC ++
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 124 NHA--HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+H +VRNSLI MY D+ A +F+++ L WNSII + E
Sbjct: 353 SHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLK 412
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
M+ SG P+ T L +G L G+ H I R + + NSLVDMYAK
Sbjct: 413 EMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G + A +F SM+ ++ +++ ++I G G G AL F +M + ++PD +T + V
Sbjct: 473 GEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM-DRSGIKPDHVTMVAV 531
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
L ACSH V EG F M + ++ ++HY CMVDL RAG +++A + +P E
Sbjct: 532 LSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP 591
Query: 362 NAIVWRSLLAACRTHGNVKLAE-KVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKER 420
++ + +LL AC HGN + E K LLE +P H Y+LLA+MYA TG W+++ +
Sbjct: 592 SSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Query: 421 RSMQERGVKK 430
+ + GV+K
Sbjct: 652 TLLSDLGVQK 661
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 173/389 (44%), Gaps = 42/389 (10%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++HA +G + ++V K++ F + ++ A ++ + + WN +I +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSA---FNLLDEAQTITENSEILHPLPWNVLIGSY 159
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ +++V YKRM + D FT+ ++K L G+ +H S
Sbjct: 160 IRNKRFQESVSVYKRMMS--KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC 217
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ +V N+LI MY ++ A +LF+ M +D V+WN+II+C K EA RM
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 185 QSGMRPDDATF-----------------------------------VVTLSACGAMGALA 209
SG+ T+ + L AC +GAL
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 210 FGRWVHSCIQRA-TYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
+G+ H + R+ ++ +I +V NSL+ MY++C + A+ +F+ ++ ++ +WN++I G
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
A + E L EML P+ IT +L + G + G+ + + R + +
Sbjct: 398 FAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYK 456
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
+ + +VD+ ++G + A + +M
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 138/329 (41%), Gaps = 41/329 (12%)
Query: 79 RMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGV 138
R Q G V ++ + LL G V G+QLH + G+E + + L+ Y
Sbjct: 73 RYQSGSHEFV--LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSA 130
Query: 139 MKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVT 198
++ A + E + WN +I + ++ E++ + RM+ G+R D+ T+
Sbjct: 131 FNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSV 190
Query: 199 LSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKN 258
+ AC A+ A+GR VH I+ +++ + V N+L+ MY + G V+ A +F M ++
Sbjct: 191 IKACAALLDFAYGRVVHGSIEVSSHRCNLY-VCNALISMYKRFGKVDVARRLFDRMSERD 249
Query: 259 VISWNTMILGLASHGNGTEALTLFAEMLQENV---------------------------- 290
+SWN +I S EA L M V
Sbjct: 250 AVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVV 309
Query: 291 ------VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY-GCMVDLLGR 343
VR + + L ACSH G + G+ + ++ R + + + ++ + R
Sbjct: 310 GMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSR 369
Query: 344 AGLVEEAYILIKNMPMECNAI-VWRSLLA 371
+ A+I+ + +E N++ W S+++
Sbjct: 370 CSDLRHAFIVFQQ--VEANSLSTWNSIIS 396
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 203/430 (47%), Gaps = 37/430 (8%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQG--EPHVVP-DTFT 93
G ++ A +FDR+ + DA WN +I + + + +A RM E +V +T
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 94 FSFL------------------------------LKIVGGLGSVVLGKQLHCSTLKLGVE 123
L LK +G++ GK HC ++
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 124 NHA--HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFT 181
+H +VRNSLI MY D+ A +F+++ L WNSII + E
Sbjct: 353 SHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLK 412
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
M+ SG P+ T L +G L G+ H I R + + NSLVDMYAK
Sbjct: 413 EMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G + A +F SM+ ++ +++ ++I G G G AL F +M + ++PD +T + V
Sbjct: 473 GEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM-DRSGIKPDHVTMVAV 531
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC 361
L ACSH V EG F M + ++ ++HY CMVDL RAG +++A + +P E
Sbjct: 532 LSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP 591
Query: 362 NAIVWRSLLAACRTHGNVKLAE-KVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKER 420
++ + +LL AC HGN + E K LLE +P H Y+LLA+MYA TG W+++ +
Sbjct: 592 SSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Query: 421 RSMQERGVKK 430
+ + GV+K
Sbjct: 652 TLLSDLGVQK 661
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 173/389 (44%), Gaps = 42/389 (10%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++HA +G + ++V K++ F + ++ A ++ + + WN +I +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSA---FNLLDEAQTITENSEILHPLPWNVLIGSY 159
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ +++V YKRM + D FT+ ++K L G+ +H S
Sbjct: 160 IRNKRFQESVSVYKRMMS--KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC 217
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ +V N+LI MY ++ A +LF+ M +D V+WN+II+C K EA RM
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 185 QSGMRPDDATF-----------------------------------VVTLSACGAMGALA 209
SG+ T+ + L AC +GAL
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 210 FGRWVHSCIQRA-TYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
+G+ H + R+ ++ +I +V NSL+ MY++C + A+ +F+ ++ ++ +WN++I G
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
A + E L EML P+ IT +L + G + G+ + + R + +
Sbjct: 398 FAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYK 456
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
+ + +VD+ ++G + A + +M
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 138/329 (41%), Gaps = 41/329 (12%)
Query: 79 RMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGV 138
R Q G V ++ + LL G V G+QLH + G+E + + L+ Y
Sbjct: 73 RYQSGSHEFV--LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSA 130
Query: 139 MKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVT 198
++ A + E + WN +I + ++ E++ + RM+ G+R D+ T+
Sbjct: 131 FNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSV 190
Query: 199 LSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKN 258
+ AC A+ A+GR VH I+ +++ + V N+L+ MY + G V+ A +F M ++
Sbjct: 191 IKACAALLDFAYGRVVHGSIEVSSHRCNLY-VCNALISMYKRFGKVDVARRLFDRMSERD 249
Query: 259 VISWNTMILGLASHGNGTEALTLFAEMLQENV---------------------------- 290
+SWN +I S EA L M V
Sbjct: 250 AVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVV 309
Query: 291 ------VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY-GCMVDLLGR 343
VR + + L ACSH G + G+ + ++ R + + + ++ + R
Sbjct: 310 GMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSR 369
Query: 344 AGLVEEAYILIKNMPMECNAI-VWRSLLA 371
+ A+I+ + +E N++ W S+++
Sbjct: 370 CSDLRHAFIVFQQ--VEANSLSTWNSIIS 396
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 236/438 (53%), Gaps = 49/438 (11%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
+G ++ A+ +FD + + + WN+M++ + ++A+ ++RM + D +++
Sbjct: 153 SGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPR------RDVVSWT 206
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
++ + G V ++L E + N++I Y I+ A QLF+ M +
Sbjct: 207 AMVDGLAKNGKVDEARRL----FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 156 DLVAWNSIIDCLV-------CCGKYN------------------------EALDFFTRMV 184
D +WN++I + CG ++ EAL+ F++M+
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 185 QSG-MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYL-GEITSVSNSLVDMYAKCG 242
+ G ++P+ T+V LSAC + L G+ +H I ++ + EI V+++L++MY+K G
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI--VTSALLNMYSKSG 380
Query: 243 AVEEAYEIFRS--MKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
+ A ++F + + +++ISWN+MI A HG+G EA+ ++ +M +++ +P +T+L
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM-RKHGFKPSAVTYLN 439
Query: 301 VLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME 360
+L ACSH G V++G +F + RD ++ +HY C+VDL GRAG +++ I
Sbjct: 440 LLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDAR 499
Query: 361 CNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKER 420
+ + ++L+AC H V +A++V K +LE + YVL++N+YA+ G+ E ++ R
Sbjct: 500 LSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMR 559
Query: 421 RSMQERGVKKPEPGNSFV 438
M+E+G+KK +PG S+V
Sbjct: 560 MKMKEKGLKK-QPGCSWV 576
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 170/392 (43%), Gaps = 88/392 (22%)
Query: 34 VPAGDMNYAVSVFDRVD-KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTF 92
+ GDM A +FDRVD + + W M+ G+ + Q A + ++ M P+
Sbjct: 88 IKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM--------PERN 139
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM 152
S+ N++I Y I+ A +LF+EM
Sbjct: 140 VVSW---------------------------------NTMIDGYAQSGRIDKALELFDEM 166
Query: 153 LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGR 212
+++V+WNS++ LV G+ +EA++ F RM R D ++ + G + R
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEAR 222
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFR-------------------- 252
+ C+ + N+++ YA+ ++EA ++F+
Sbjct: 223 RLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRN 277
Query: 253 -----------SMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
M KNVISW TMI G + EAL +F++ML++ V+P+ T++ +
Sbjct: 278 REMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN-MPME 360
L ACS + EG++ ++S+ + + + ++++ ++G + A + N + +
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIV-TSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 361 CNAIVWRSLLAACRTHGN----VKLAEKVRKH 388
+ I W S++A HG+ +++ ++RKH
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKH 428
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 25/233 (10%)
Query: 142 IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA 201
I A +LF+ + +D+V W +I + G EA + F R+ D VVT +A
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV-------DSRKNVVTWTA 114
Query: 202 CGAMGALAFGRWVHSCIQRATY--LGEITSVS-NSLVDMYAKCGAVEEAYEIFRSMKGKN 258
+ + R I + + E VS N+++D YA+ G +++A E+F M +N
Sbjct: 115 MVS----GYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 259 VISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYF 318
++SWN+M+ L G EA+ LF E + R D +++ ++ + G VDE RR F
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLF-----ERMPRRDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLA 371
D M + + + M+ + ++EA L + MP E + W +++
Sbjct: 226 DCMP-----ERNIISWNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMIT 272
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 231/475 (48%), Gaps = 52/475 (10%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF- 64
++H ++GF + + VG +V ++ G+ A +F++V +N I G
Sbjct: 150 QLHCLAMKSGF-EMEVYVGTSLV--SMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 65 --GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G N ++ EP+ V TF + L ++ G+QLH +K
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEEPNDV----TFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN-KDLVAWNSIIDCLVCCGKYNEALDFFT 181
+ V +LI MY + ++A+ +F E+ + ++L++WNS+I ++ G++ A++ F
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 182 RMVQSGMRPDDATF-----------------------------------VVTLSACGAMG 206
++ G++PD AT+ LSAC +
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW 382
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM--KGKNVISWNT 264
L G+ +H + +A +I V SL+DMY KCG A IF K K+ + WN
Sbjct: 383 TLKNGKEIHGHVIKAAAERDIF-VLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNV 441
Query: 265 MILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRD 324
MI G HG A+ +F E+L+E V P TF VL ACSH G V++G + F +M +
Sbjct: 442 MISGYGKHGECESAIEIF-ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEE 500
Query: 325 YNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEK 384
Y +P+ +H GCM+DLLGR+G + EA +I M +++ SLL +CR H + L E+
Sbjct: 501 YGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEE 559
Query: 385 VRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFVG 439
L ELEP + + +V+L+++YA+ +W ++ R+ + ++ + K PG S G
Sbjct: 560 AAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKL-PGLSLSG 613
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 140/302 (46%), Gaps = 11/302 (3%)
Query: 89 PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQL 148
P+ FTF LLK LG VV G+ LH +K G +L+ MY +K + A ++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 149 FEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL 208
+EM + + + N+ + L+ G +A F SG + T L CG +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG- 147
Query: 209 AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
G +H ++ + E+ V SLV MY++CG A +F + K+V+++N I G
Sbjct: 148 --GMQLHCLAMKSGFEMEVY-VGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFD-IMSRDYNV 327
L +G ++F M + + P+ +TF+ + AC+ + GR+ +M +++
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGN----VKLAE 383
+ V ++D+ + + AYI+ + N I W S+++ +G V+L E
Sbjct: 265 ETMVGT--ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 384 KV 385
K+
Sbjct: 323 KL 324
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 213/408 (52%), Gaps = 12/408 (2%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFS 95
G ++ AV +F V + + +N ++ GF KA+ LF +Q+G V F+ +
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRG---VELTDFSLT 421
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK 155
+ G + + +Q+H +K G + ++ +L+ M + + A ++F++ +
Sbjct: 422 SAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSN 481
Query: 156 --DLVAWNSIIDCLVCCGKYNEALDFFTR-MVQSGMRPDDATFVVTLSACGAMGALAFGR 212
A SII G ++A+ F R + + + D+ + + L+ CG +G G
Sbjct: 482 LDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGY 541
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
+H +A Y +I S+ NSL+ MYAKC ++A +IF +M+ +VISWN++I
Sbjct: 542 QIHCYALKAGYFSDI-SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQ 600
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCAC--SHGGFVDEGRRYFDIMSRDYNVQPT 330
NG EAL L++ M E ++PD IT V+ A + + R F M Y+++PT
Sbjct: 601 RNGDEALALWSRM-NEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPT 659
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLL 390
+HY V +LG GL+EEA I +MP++ V R+LL +CR H N +A++V K +L
Sbjct: 660 TEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLIL 719
Query: 391 ELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEPGNSFV 438
+P S+Y+L +N+Y+++G W+ R M+ERG +K P S++
Sbjct: 720 STKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRK-HPAKSWI 766
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 152/347 (43%), Gaps = 48/347 (13%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K +HA + + L I + + P A+ VF + P + +I GF
Sbjct: 100 KAVHASFLKLREEKTRLGNALISTYLKLGFP----REAILVFVSLSSPTVVSYTALISGF 155
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
N +A+ + RM++ V P+ +TF +L + LG Q+H +K G N
Sbjct: 156 SRLNLEIEALKVFFRMRKA-GLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLN 214
Query: 125 HAHVRNSLIHMYGVMKD----IETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFF 180
V NSL+ +Y KD + +LF+E+ +D+ +WN+++ LV GK ++A D F
Sbjct: 215 SVFVSNSLMSLYD--KDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLF 272
Query: 181 TRMVQ-SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
M + G D T LS+C L GR +H R + E+ SV+N+L+ Y+
Sbjct: 273 YEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQEL-SVNNALIGFYS 331
Query: 240 K-------------------------------CGAVEEAYEIFRSMKGKNVISWNTMILG 268
K G V+ A EIF ++ KN I++N ++ G
Sbjct: 332 KFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAG 391
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGR 315
+G+G +AL LF +MLQ V D + + AC G V E +
Sbjct: 392 FCRNGHGLKALKLFTDMLQRGVELTD-FSLTSAVDAC---GLVSEKK 434
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 5/225 (2%)
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
F +LL++ V + K +H S LKL E + N+LI Y + A +F +
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 154 NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGM-RPDDATFVVTLSACGAMGALAFGR 212
+ +V++ ++I EAL F RM ++G+ +P++ TFV L+AC + + G
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAK--CGAVEEAYEIFRSMKGKNVISWNTMILGLA 270
+H I ++ +L + VSNSL+ +Y K + ++ ++F + ++V SWNT++ L
Sbjct: 202 QIHGLIVKSGFLNSVF-VSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV 260
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGR 315
G +A LF EM + D T +L +C+ + GR
Sbjct: 261 KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGR 305
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 204/436 (46%), Gaps = 47/436 (10%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
+N E+H+ + GF + LV ++ + G + A VFD V D + WN+M
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLV---DMYSKCGKLEDARKVFDSVKNKDVYTWNSM 424
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
I G+ KA + RMQ + ++ P+ T+
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQ--DANLRPNIITW-------------------------- 456
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEM-----LNKDLVAWNSIIDCLVCCGKYNE 175
N++I Y D A LF+ M + ++ WN II + GK +E
Sbjct: 457 ---------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 176 ALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
AL+ F +M S P+ T + L AC + R +H C+ R L I +V N+L
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN-LDAIHAVKNALT 566
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDG 295
D YAK G +E + IF M+ K++I+WN++I G HG+ AL LF +M + + P+
Sbjct: 567 DTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT-PNR 625
Query: 296 ITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIK 355
T ++ A G VDEG++ F ++ DY++ P ++H MV L GRA +EEA I+
Sbjct: 626 GTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQ 685
Query: 356 NMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNE 415
M ++ +W S L CR HG++ +A ++L LEP +++ +++ +YA +
Sbjct: 686 EMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGR 745
Query: 416 MSKERRSMQERGVKKP 431
+ + ++ +KKP
Sbjct: 746 SLEGNKPRRDNLLKKP 761
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 163/344 (47%), Gaps = 16/344 (4%)
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM 152
T+ LL+ GS+ LG+ LH + L E V L+ MY I A ++F+ M
Sbjct: 83 TYLKLLESCIDSGSIHLGRILH-ARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSM 141
Query: 153 LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGR 212
++L W+++I ++ E F M++ G+ PDD F L C G + G+
Sbjct: 142 RERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 213 WVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASH 272
+HS + + + VSNS++ +YAKCG ++ A + FR M+ ++VI+WN+++L +
Sbjct: 202 VIHSVVIKLG-MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 273 GNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR--DYNVQPT 330
G EA+ L EM +E + P +T+ ++ + G D D+M + + +
Sbjct: 261 GKHEEAVELVKEMEKEG-ISPGLVTWNILIGGYNQLGKCDAA---MDLMQKMETFGITAD 316
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNMPME---CNAIVWRSLLAACRTHGNVKLAEKVRK 387
V + M+ L G+ +A + + M + NA+ S ++AC + +V
Sbjct: 317 VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-- 374
Query: 388 HLLELEPCHSSDYVL---LANMYASTGQWNEMSKERRSMQERGV 428
H + ++ D ++ L +MY+ G+ + K S++ + V
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 150/356 (42%), Gaps = 80/356 (22%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
K IH+ + + G V I+ AV G++++A F R+ + D WN+++ +
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSIL---AVYAKCGELDFATKFFRRMRERDVIAWNSVLLAY 257
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ E+AV K M++ + P T++ L +GG
Sbjct: 258 CQNGKHEEAVELVKEMEK--EGISPGLVTWNIL---IGG--------------------- 291
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEALDFF 180
Y + + A L ++M + D+ W ++I L+ G +ALD F
Sbjct: 292 -----------YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
+M +G+ P+ T + +SAC + + G VHS + ++ ++ V NSLVDMY+K
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVL-VGNSLVDMYSK 399
Query: 241 CGAVEEAYEIFRSMKGK-----------------------------------NVISWNTM 265
CG +E+A ++F S+K K N+I+WNTM
Sbjct: 400 CGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTM 459
Query: 266 ILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIM 321
I G +G+ EA+ LF M ++ V+ + T+ ++ G DE F M
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 149/336 (44%), Gaps = 47/336 (13%)
Query: 42 AVSVFDRVDKPDAFLWNTMIRGFGNTNQ-PEKAVLFYKRMQQGEPHVVPDTFTFSFLLKI 100
A VFD + + + F W+ MI + N+ E A LF M+ G V+PD F F +L+
Sbjct: 134 ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG---VLPDDFLFPKILQG 190
Query: 101 VGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAW 160
G V GK +H +KLG+ + V NS++ +Y +++ A + F M +D++AW
Sbjct: 191 CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAW 250
Query: 161 NSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQR 220
NS++ GK+ EA++ M + G+ P T+
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW------------------------- 285
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMK----GKNVISWNTMILGLASHGNGT 276
N L+ Y + G + A ++ + M+ +V +W MI GL +G
Sbjct: 286 -----------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRY 334
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
+AL +F +M VV P+ +T + + ACS +++G I + + +
Sbjct: 335 QALDMFRKMFLAGVV-PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG-NS 392
Query: 337 MVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAA 372
+VD+ + G +E+A + ++ + + W S++
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNK-DVYTWNSMITG 427
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 6/225 (2%)
Query: 164 IDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY 223
D L G EA + Q G + +T++ L +C G++ GR +H+ + +
Sbjct: 53 FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA--RFGLF 110
Query: 224 LGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
V L+ MYAKCG + +A ++F SM+ +N+ +W+ MI + E LF
Sbjct: 111 TEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 284 EMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
M+++ V+ PD F +L C++ G V+ G+ ++ + + ++ ++ + +
Sbjct: 171 LMMKDGVL-PDDFLFPKILQGCANCGDVEAGKVIHSVVIK-LGMSSCLRVSNSILAVYAK 228
Query: 344 AGLVEEAYILIKNMPMECNAIVWRS-LLAACRTHGNVKLAEKVRK 387
G ++ A + M E + I W S LLA C+ + + E V++
Sbjct: 229 CGELDFATKFFRRM-RERDVIAWNSVLLAYCQNGKHEEAVELVKE 272
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 191/364 (52%), Gaps = 11/364 (3%)
Query: 36 AGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFS 95
+G A +FD + + + WN M+ G+ + ++ ++A+ F M+Q ++ D T
Sbjct: 342 SGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI--DNVTLV 399
Query: 96 FLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN- 154
++L + G+ V +GKQ H + G + + V N+L+ MYG +++A+ F +M
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL 459
Query: 155 KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV 214
+D V+WN+++ + G+ +AL FF M Q +P T L+ C + AL G+ +
Sbjct: 460 RDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAI 518
Query: 215 HSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGN 274
H + R Y ++ + ++VDMY+KC + A E+F+ +++I WN++I G +G
Sbjct: 519 HGFLIRDGYKIDVV-IRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGR 577
Query: 275 GTEALTLFAEMLQENV-VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKH 333
E LF ML EN V+PD +TFLG+L AC G V+ G +YF MS Y++ P V+H
Sbjct: 578 SKEVFELF--MLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEH 635
Query: 334 YGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE-- 391
Y CM++L + G + + + MP + + + AC+ + KL K L+
Sbjct: 636 YDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDH 695
Query: 392 -LEP 394
L+P
Sbjct: 696 YLQP 699
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 181/400 (45%), Gaps = 37/400 (9%)
Query: 37 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 96
G ++ A +F+ + + D WN +I ++ ++RM + V +F+
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD--GVRATETSFAG 167
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
+LK G + + L +QLHC+ +K G + + S++ +YG + + A ++F+E++N
Sbjct: 168 VLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPS 227
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
V+WN I+ + G +EA+ F +M++ +RP + T + AC AL G+ +H+
Sbjct: 228 DVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHA 287
Query: 217 CIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGT 276
+ + + + T VS S+ DMY KC +E A +F + K++ SW + + G A G
Sbjct: 288 IAVKLSVVAD-TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTR 346
Query: 277 EALTLFAEMLQENVV------------------------------RPDGITFLGVLCACS 306
EA LF M + N+V D +T + +L CS
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 307 HGGFVDEGRRYFDIMSRD-YNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIV 365
V G++ + R Y+ V + ++D+ G+ G ++ A I + M + +
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVAN--ALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 366 WRSLLAACRTHGNVKLAEKVRKHL-LELEPCHSSDYVLLA 404
W +LL G + A + + +E +P + LLA
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLA 504
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
N I YG ++ A +LFEEM +D +WN++I G +E F RM + G+R
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYE 249
+ +F L +CG + L R +H + + Y G + + S+VD+Y KC + +A
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNV-DLETSIVDVYGKCRVMSDARR 218
Query: 250 IFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGG 309
+F + + +SWN ++ G EA+ +F +ML+ N VRP T V+ ACS
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN-VRPLNHTVSSVMLACSRSL 277
Query: 310 FVDEGR 315
++ G+
Sbjct: 278 ALEVGK 283
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 11/253 (4%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK-PDAFLWNTMIRG 63
K+ H IY+ G+ N +V ++ G + A F ++ + D WN ++ G
Sbjct: 415 KQAHGFIYRHGYDTNVIVANALLDMYG---KCGTLQSANIWFRQMSELRDEVSWNALLTG 471
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ E+A+ F++ MQ P +T + LL + ++ LGK +H ++ G +
Sbjct: 472 VARVGRSEQALSFFEGMQ---VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYK 528
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCC--GKYNEALDFFT 181
+R +++ MY + + A ++F+E +DL+ WNSII CC G+ E + F
Sbjct: 529 IDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRG--CCRNGRSKEVFELFM 586
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
+ G++PD TF+ L AC G + G S + ++ + ++++Y K
Sbjct: 587 LLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKY 646
Query: 242 GAVEEAYEIFRSM 254
G + + E M
Sbjct: 647 GCLHQLEEFLLLM 659
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 170/348 (48%), Gaps = 10/348 (2%)
Query: 5 KEIHARIYQTG--FHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
KE+HA + ++ Q + G I ++C GDM VF + +A W ++
Sbjct: 336 KEVHAHVLKSKNYVEQPFVHSGLIDLYCK----CGDMASGRRVFYGSKQRNAISWTALMS 391
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G+ + ++A+ MQQ PD T + +L + L ++ GK++HC LK
Sbjct: 392 GYAANGRFDQALRSIVWMQQ--EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF 449
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ + SL+ MY E +LF+ + +++ AW ++IDC V ++ F
Sbjct: 450 LPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRL 509
Query: 183 MVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCG 242
M+ S RPD T L+ C + AL G+ +H I + + I VS ++ MY KCG
Sbjct: 510 MLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF-ESIPFVSARIIKMYGKCG 568
Query: 243 AVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL 302
+ A F ++ K ++W +I + +A+ F +M+ P+ TF VL
Sbjct: 569 DLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFT-PNTFTFTAVL 627
Query: 303 CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
CS GFVDE R+F++M R YN+QP+ +HY +++LL R G VEEA
Sbjct: 628 SICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 5/314 (1%)
Query: 3 HLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
H K++H I G N + K++ + G + A VFD + + WN ++R
Sbjct: 129 HGKQVHVHIRINGLESNEFLRTKLV---HMYTACGSVKDAQKVFDESTSSNVYSWNALLR 185
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G + + + + E V + ++ S + K G ++ G + H +K G+
Sbjct: 186 GTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL 245
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTR 182
N ++ SL+ MY + A ++F+E++ +D+V W ++I L + EAL F
Sbjct: 246 FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRT 305
Query: 183 MV-QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
M+ + + P+ L G + AL G+ VH+ + ++ E V + L+D+Y KC
Sbjct: 306 MISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKC 365
Query: 242 GAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
G + +F K +N ISW ++ G A++G +AL M QE RPD +T V
Sbjct: 366 GDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG-FRPDVVTIATV 424
Query: 302 LCACSHGGFVDEGR 315
L C+ + +G+
Sbjct: 425 LPVCAELRAIKQGK 438
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 12/327 (3%)
Query: 61 IRGFGNTNQPEKAVLFYKRMQQ-GEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
I+ F N E A+ ++Q G P + TFS LL+ S++ GKQ+H
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIP---VNATTFSALLEACVRRKSLLHGKQVHVHIRI 139
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGK--YNEAL 177
G+E++ +R L+HMY ++ A ++F+E + ++ +WN+++ V GK Y + L
Sbjct: 140 NGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVL 199
Query: 178 DFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
FT M + G+ + + + AL G H+ + + + SLVDM
Sbjct: 200 STFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF-LKTSLVDM 258
Query: 238 YAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
Y KCG V A +F + ++++ W MI GLA + EAL LF M+ E + P+ +
Sbjct: 259 YFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVI 318
Query: 298 FLGVLCACSHGGFVDEGRRYFD--IMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIK 355
+L + G+ + S++Y QP V H G ++DL + G + +
Sbjct: 319 LTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV-HSG-LIDLYCKCGDMASGRRVFY 376
Query: 356 NMPMECNAIVWRSLLAACRTHGNVKLA 382
NAI W +L++ +G A
Sbjct: 377 GSKQR-NAISWTALMSGYAANGRFDQA 402
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 7/247 (2%)
Query: 5 KEIHARIYQTGFHQN-HLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
KEIH + F N LV ++++ VP Y + +FDR+++ + W MI
Sbjct: 438 KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVP----EYPIRLFDRLEQRNVKAWTAMIDC 493
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ + ++ M + PD+ T +L + L ++ LGK+LH LK E
Sbjct: 494 YVENCDLRAGIEVFRLMLLSKHR--PDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFE 551
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+ V +I MYG D+ +A+ F+ + K + W +II+ C + +A++ F +M
Sbjct: 552 SIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQM 611
Query: 184 VQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
V G P+ TF LS C G + + + R L + ++++ +CG
Sbjct: 612 VSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGR 671
Query: 244 VEEAYEI 250
VEEA +
Sbjct: 672 VEEAQRL 678
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 157/299 (52%), Gaps = 12/299 (4%)
Query: 15 GFHQNHLVVGKII---VFCAVSV-----PAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 66
G + LVV ++I VF S+ G+++ VFD + + W ++I
Sbjct: 303 GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 67 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHA 126
E+A+ ++ M++ H++ + T +L+ G +G+++LGK+LH +K +E +
Sbjct: 363 EGFGEEAISLFRIMKR--RHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQS 186
++ ++L+ +Y + A + +++ ++D+V+W ++I G +EALDF M+Q
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE 480
Query: 187 GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
G+ P+ T+ L AC +L GR +HS ++ L + V ++L+ MYAKCG V E
Sbjct: 481 GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF-VGSALIHMYAKCGFVSE 539
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
A+ +F SM KN++SW MI+G A +G EAL L M E D I F +L C
Sbjct: 540 AFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI-FATILSTC 597
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 195/403 (48%), Gaps = 21/403 (5%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
+++H + + G N +V ++ F A G++ A+ FD +++ D W +I
Sbjct: 204 RQVHGNMVKVGV-GNLIVESSLVYFYA---QCGELTSALRAFDMMEEKDVISWTAVISAC 259
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
KA+ + M +P+ FT +LK ++ G+Q+H +K ++
Sbjct: 260 SRKGHGIKAIGMFIGMLN--HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
V SL+ MY +I ++F+ M N++ V W SII G EA+ F M
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHS-----CIQRATYLGEITSVSNSLVDMYA 239
+ + ++ T V L ACG++GAL G+ +H+ I++ Y+G ++LV +Y
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIG------STLVWLYC 431
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
KCG +A+ + + + ++V+SW MI G +S G+ +EAL EM+QE V P+ T+
Sbjct: 432 KCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG-VEPNPFTYS 490
Query: 300 GVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
L AC++ + GR I +++ + V ++ + + G V EA+ + +MP
Sbjct: 491 SALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVSEAFRVFDSMP- 548
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVL 402
E N + W++++ +G + A K+ + +E E DY+
Sbjct: 549 EKNLVSWKAMIMGYARNGFCREALKL-MYRMEAEGFEVDDYIF 590
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 203/428 (47%), Gaps = 24/428 (5%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTM 60
M +K IHA + Q +I C V GD+ YA VFD + + + W M
Sbjct: 98 MRLIKRIHAMALKCFDDQVIYFGNNLISSC---VRLGDLVYARKVFDSMPEKNTVTWTAM 154
Query: 61 IRGFGNTNQPEKA-VLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
I G+ ++A LF ++ G + F LL + LG+Q+H + +K
Sbjct: 155 IDGYLKYGLEDEAFALFEDYVKHGIRFT--NERMFVCLLNLCSRRAEFELGRQVHGNMVK 212
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDF 179
+GV N V +SL++ Y ++ +A + F+ M KD+++W ++I G +A+
Sbjct: 213 VGVGNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGM 271
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
F M+ P++ T L AC AL FGR VHS + + ++ V SL+DMYA
Sbjct: 272 FIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF-VGTSLMDMYA 330
Query: 240 KCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFL 299
KCG + + ++F M +N ++W ++I A G G EA++LF M + +++ + +T +
Sbjct: 331 KCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI-ANNLTVV 389
Query: 300 GVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM 359
+L AC G + G+ + ++ +++ V +V L + G +A+ +++ +P
Sbjct: 390 SILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS 448
Query: 360 ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE-------------LEPCHSSDYVLLANM 406
+ + W ++++ C + G+ A K +++ L+ C +S+ +L+
Sbjct: 449 R-DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRS 507
Query: 407 YASTGQWN 414
S + N
Sbjct: 508 IHSIAKKN 515
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 7/200 (3%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGF 64
KE+HA+I + +N + +G +V+ + G+ A +V ++ D W MI G
Sbjct: 405 KELHAQIIKNSIEKN-VYIGSTLVW--LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGC 461
Query: 65 GNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ +A+ F K M Q+G V P+ FT+S LK S+++G+ +H K
Sbjct: 462 SSLGHESEALDFLKEMIQEG---VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL 518
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
++ V ++LIHMY + A ++F+ M K+LV+W ++I G EAL RM
Sbjct: 519 SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578
Query: 184 VQSGMRPDDATFVVTLSACG 203
G DD F LS CG
Sbjct: 579 EAEGFEVDDYIFATILSTCG 598
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 163/338 (48%), Gaps = 45/338 (13%)
Query: 38 DMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTF-- 94
D+ A FDR+ + WN M+ G+ E A+ LF ++ G V P+ T+
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG---VRPNETTWVI 269
Query: 95 -----SF---------LLKIVGG--------LGSVVLGKQLHCSTLK--------LGVEN 124
SF L+K++ + + +L C ++ LG +
Sbjct: 270 VISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR 329
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMV 184
+ N++I Y + D+ +A QLF+ M +++V+WNS+I G+ A++FF M+
Sbjct: 330 NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 185 QSG-MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGA 243
G +PD+ T + LSACG M L G + I R + S SL+ MYA+ G
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI-RKNQIKLNDSGYRSLIFMYARGGN 448
Query: 244 VEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC 303
+ EA +F MK ++V+S+NT+ A++G+G E L L ++M E + PD +T+ VL
Sbjct: 449 LWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGI-EPDRVTYTSVLT 507
Query: 304 ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
AC+ G + EG+R F + P HY CM DLL
Sbjct: 508 ACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 135/302 (44%), Gaps = 37/302 (12%)
Query: 110 GKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVC 169
K+ C + EN +I + +KD+E A + F+ M K +V+WN+++
Sbjct: 182 NKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQ 241
Query: 170 CGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCI-QRATYLGEIT 228
G +AL F M++ G+RP++ T+V+ +SAC + R + I ++ L
Sbjct: 242 NGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN--C 299
Query: 229 SVSNSLVDMYAKC--------------------------------GAVEEAYEIFRSMKG 256
V +L+DM+AKC G + A ++F +M
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 257 KNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRR 316
+NV+SWN++I G A +G A+ F +M+ +PD +T + VL AC H ++ G
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDC 419
Query: 317 YFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTH 376
D + R ++ Y ++ + R G + EA + M E + + + +L A +
Sbjct: 420 IVDYI-RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAAN 477
Query: 377 GN 378
G+
Sbjct: 478 GD 479
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 10 RIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQ 69
RI+ Q +LV ++ + GDM+ A +FD + K + WN++I G+ + Q
Sbjct: 320 RIFNELGTQRNLVTWNAMISGYTRI--GDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQ 377
Query: 70 PEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHV 128
A+ F++ M G+ PD T +L G + + LG + K ++ +
Sbjct: 378 AALAIEFFEDMIDYGDSK--PDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSG 435
Query: 129 RNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGM 188
SLI MY ++ A ++F+EM +D+V++N++ G E L+ ++M G+
Sbjct: 436 YRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGI 495
Query: 189 RPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYA 239
PD T+ L+AC G L G+ + S+ N L D YA
Sbjct: 496 EPDRVTYTSVLTACNRAGLLKEGQRI------------FKSIRNPLADHYA 534
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 19/247 (7%)
Query: 148 LFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
+F+ + ++ NS+ N+ L + + + G+ PD +F V + + G G
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 208 LAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMIL 267
L + +++ + + V N ++DMY K +VE A ++F + + WN MI
Sbjct: 122 L-----FQALVEKLGFFKD-PYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 268 GLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNV 327
G GN EA LF +M+ EN D +++ ++ + ++ R+YFD M
Sbjct: 176 GYWKWGNKEEACKLF-DMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMP----- 225
Query: 328 QPTVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEK 384
+ +V + M+ + G E+A L +M + N W +++AC + L
Sbjct: 226 EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRS 285
Query: 385 VRKHLLE 391
+ K + E
Sbjct: 286 LVKLIDE 292
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 9/208 (4%)
Query: 194 TFVVTLSA-------CGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEE 246
+VV LS CG L + VH I + +++S ++ L++MY+ CG E
Sbjct: 249 NYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSS-NHVLLEMYSNCGLANE 307
Query: 247 AYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
A +F M KN+ +W +I A +G G +A+ +F+ +E + PDG F G+ AC
Sbjct: 308 AASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACG 366
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVW 366
G VDEG +F+ MSRDY + P+++ Y +V++ G ++EA ++ MPME N VW
Sbjct: 367 MLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVW 426
Query: 367 RSLLAACRTHGNVKLAEKVRKHLLELEP 394
+L+ R HGN++L + + + L+P
Sbjct: 427 ETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 132 LIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPD 191
L+ MY A +FE+M K+L W II C G +A+D F+R + G PD
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 192 DATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIF 251
F ACG +G + G + R + SLV+MYA G ++EA E
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 252 RSMKGK-NVISWNTMILGLASHGN 274
M + NV W T++ HGN
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVHGN 438
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
Query: 162 SIIDCLVCCGK--YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
S+ + + C + Y +A++ + G PD FV+ +C + +L + VH
Sbjct: 208 SVEEVMRLCQRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFL 263
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEAL 279
++ + G+ ++N ++ M+ +C ++ +A +F M K++ SW+ M+ + +G G +AL
Sbjct: 264 QSKFRGD-PKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDAL 322
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
LF EM + + +P+ TFL V AC+ G ++E +FD M ++ + P +HY ++
Sbjct: 323 HLFEEMTKHGL-KPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLG 381
Query: 340 LLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEP 394
+LG+ G + EA I+++P E A W ++ R HG++ L + + + +++++P
Sbjct: 382 VLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 87 VVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAH 146
+PD F L + L S+ K++H L+ + N +I M+G I A
Sbjct: 232 AMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAK 291
Query: 147 QLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG 206
++F+ M++KD+ +W+ ++ G ++AL F M + G++P++ TF+ AC +G
Sbjct: 292 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVIS-WNTM 265
+ ++ + T ++ + KCG + EA + R + + W M
Sbjct: 352 GIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 411
Query: 266 ILGLASHGN 274
HG+
Sbjct: 412 RNYARLHGD 420
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 164 IDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY 223
+D + GK +A++ G D CG AL + VH I +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 224 LGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
+ +I S NS+++MY+ CG+VE+A +F SM +N+ +W +I A +G G +A+ F+
Sbjct: 213 ISDI-SAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271
Query: 284 EMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
QE +PDG F + AC G ++EG +F+ M ++Y + P ++HY +V +L
Sbjct: 272 RFKQEG-NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAE 330
Query: 344 AGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELE 393
G ++EA +++ ME N +W +L+ R HG++ L ++ + + +L+
Sbjct: 331 PGYLDEALRFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
NS+I MY +E A +F M ++L W +I C G+ +A+D F+R Q G +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYE 249
PD F ACG +G + G + + + SLV M A+ G ++EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 250 IFRSMKGKNVISWNTMILGLASHGN 274
SM+ NV W T++ HG+
Sbjct: 340 FVESME-PNVDLWETLMNLSRVHGD 363
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 13/266 (4%)
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALD 178
K V H +NS++ Y A + E D L G + EA++
Sbjct: 57 KRNVAGHTLTQNSMVGQYKTTVSPSVAQNVTIETF-----------DSLCIQGNWREAVE 105
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
+ G D + CG AL R VH CI ++ N++++MY
Sbjct: 106 VLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDV-GARNAIIEMY 164
Query: 239 AKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
+ C +V++A ++F M N + M+ ++G G EA+ LF +E +P+G F
Sbjct: 165 SGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN-KPNGEIF 223
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
V C+ G V EG F M R+Y + P+++HY + +L +G ++EA ++ MP
Sbjct: 224 NQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMP 283
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEK 384
ME + VW +L+ R HG+V+L ++
Sbjct: 284 MEPSVDVWETLMNLSRVHGDVELGDR 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 14/224 (6%)
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
L K+ G ++ + +H + L RN++I MY ++ A ++FEEM
Sbjct: 125 LAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEM---- 180
Query: 157 LVAWNS-----IIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFG 211
WNS ++ C V G EA+D FTR + G +P+ F S C G + G
Sbjct: 181 -PEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEG 239
Query: 212 RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLA 270
+ R + +S+ M A G ++EA M + +V W T++
Sbjct: 240 SLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSR 299
Query: 271 SHGNGTEALTLFAEMLQE-NVVRPDGITFLGVLCACSHGGFVDE 313
HG+ E AE++++ + R D ++ G L A FV +
Sbjct: 300 VHGD-VELGDRCAELVEKLDATRLDKVSSAG-LVATKASDFVKK 341
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 174/415 (41%), Gaps = 76/415 (18%)
Query: 7 IHARIYQTGF-HQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
IH + + G + + VV + F V G +A +FD + K D WN ++
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLG---FANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+ EKAV ++ MQ T LL++ G+Q+H L+LG+E++
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVK--LLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSI----------------IDCLVC 169
+ NSLI MY +E + ++F M +++L +WNSI +D +
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 170 CG------KYN-------------EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAF 210
CG +N +A+ RM +G++P ++ L A G L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 211 GRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLA 270
G+ +H I R ++ V +L+DMY K G + A +F M KN+++WN+++ GL+
Sbjct: 244 GKAIHGYILRNQLWYDVY-VETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 271 SHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPT 330
+A L M +E ++PD IT+ + + G ++
Sbjct: 303 YACLLKDAEALMIRMEKEG-IKPDAITWNSLASGYATLGKPEKA---------------- 345
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKV 385
+D++G+ +K + N + W ++ + C +GN + A KV
Sbjct: 346 -------LDVIGK----------MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKV 383
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 37/242 (15%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQG--EPHVV-------------------- 88
KPDA WN++ G+ +PEKA+ +M++ P+VV
Sbjct: 323 KPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALK 382
Query: 89 -----------PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYG 137
P+ T S LLKI+G L + GK++H L+ + A+V +L+ MYG
Sbjct: 383 VFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYG 442
Query: 138 VMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVV 197
D+++A ++F + NK L +WN ++ G+ E + F+ M+++GM PD TF
Sbjct: 443 KSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502
Query: 198 TLSACGAMGALAFGRWVHSCIQRATYLGEITSVS--NSLVDMYAKCGAVEEAYEIFRSMK 255
LS C G + G W + + R+ Y G I ++ + +VD+ + G ++EA++ ++M
Sbjct: 503 VLSVCKNSGLVQEG-WKYFDLMRSRY-GIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS 560
Query: 256 GK 257
K
Sbjct: 561 LK 562
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 7/205 (3%)
Query: 109 LGKQLHCSTLKLGVENH-AHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCL 167
LG +H +K G++N V ++ + YG + A++LF+EM +D +AWN I+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 168 VCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI 227
+ G + +A++ F M SG + D+T V L C A GR +H + R LG
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR---LGLE 121
Query: 228 TSVS--NSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEM 285
++VS NSL+ MY++ G +E + ++F SMK +N+ SWN+++ G +A+ L EM
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 286 LQENVVRPDGITFLGVLCACSHGGF 310
+ ++PD +T+ +L + G
Sbjct: 182 -EICGLKPDIVTWNSLLSGYASKGL 205
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 162/369 (43%), Gaps = 54/369 (14%)
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+IR GN N+ +KAV FY+ + E S ++ +G G V + K++ +
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGK--- 172
G N + ++LI YG E A +F M L +LV +N++ID CGK
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID---ACGKGGM 318
Query: 173 -YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS 231
+ + FF M ++G++PD TF L+ C G R + + ++ S
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY- 377
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEM-- 285
N+L+D K G ++ A+EI M K NV+S++T+I G A G EAL LF EM
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 286 -----------------------------LQENV---VRPDGITFLGVLCACSHGGFVDE 313
L+E ++ D +T+ +L G DE
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 314 GRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA---YILIKNMPMECNAIVWRSLL 370
++ F M R++ V P + Y ++D + GL +EA + K+ + + +++ +L+
Sbjct: 498 VKKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 371 AACRTHGNV 379
A +G V
Sbjct: 557 DALCKNGLV 565
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 136/304 (44%), Gaps = 28/304 (9%)
Query: 150 EEMLNKDLVAWNSII----DCLVCC---GKYNE---ALDFFTRMVQSGMRPDDATFVVT- 198
+EM + ++++ S + DC G NE A+ F+ V+ R ++ + +
Sbjct: 179 DEMFHSLMLSFESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASA 238
Query: 199 -LSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKG- 256
+S G G + + + Y G ++L+ Y + G EEA +F SMK
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGY-GNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 257 ---KNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDE 313
N++++N +I G + + F + +Q N V+PD ITF +L CS GG +
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 314 GRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME---CNAIVWRSLL 370
R FD M+ + ++ V Y ++D + + G ++ A+ ++ MP++ N + + +++
Sbjct: 358 ARNLFDEMT-NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 371 ----AACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQER 426
A R + L ++R + L+ Y L ++Y G+ E R M
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRV---SYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 427 GVKK 430
G+KK
Sbjct: 474 GIKK 477
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/290 (18%), Positives = 116/290 (40%), Gaps = 43/290 (14%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
P+ ++T+I GF + ++A+ + M+ + D +++ LL I +G
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRY--LGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCL 167
+ +G++ N+L+ YG + ++F EM + +L+ ++++ID
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 168 VCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI 227
G Y EA++ F +G+R D + + A G + G V S I T G
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV--GSAV-SLIDEMTKEGIS 581
Query: 228 TSV--SNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEM 285
+V NS++D + + ++ + + + +++ L + G + LF ++
Sbjct: 582 PNVVTYNSIIDAFGRSATMDRSADY----SNGGSLPFSSSALSALTETEGNRVIQLFGQL 637
Query: 286 LQEN----------------------------VVRPDGITFLGVLCACSH 307
E+ ++P+ +TF +L ACS
Sbjct: 638 TTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 6/250 (2%)
Query: 149 FEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL 208
+ +M+N D L K EAL+ + G D + CG + AL
Sbjct: 69 YAQMVNNHQSVTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEAL 128
Query: 209 AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILG 268
R VH CI T L +++++MY+ C + ++A +F M +N +W TMI
Sbjct: 129 EEARVVHDCI---TPLD--ARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRC 183
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
LA +G G A+ +F ++E +PD F V AC G ++EG +F+ M RDY +
Sbjct: 184 LAKNGEGERAIDMFTRFIEEGN-KPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMV 242
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKH 388
+++ Y ++++L G ++EA ++ M +E + +W +L+ C G ++L ++ +
Sbjct: 243 LSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAEL 302
Query: 389 LLELEPCHSS 398
+ +L+ S
Sbjct: 303 IKKLDASRMS 312
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 97 LLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD 156
L K+ G + ++ + +H L ++ +++I MY + + A +F EM ++
Sbjct: 118 LAKLCGEVEALEEARVVHDCITPLDARSY----HTVIEMYSGCRSTDDALNVFNEMPKRN 173
Query: 157 LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHS 216
W ++I CL G+ A+D FTR ++ G +PD F AC ++G + G
Sbjct: 174 SETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFE 233
Query: 217 CIQRATYLGEITSVSN--SLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMI 266
+ R G + S+ + ++++M A CG ++EA + M + +V W T++
Sbjct: 234 SMYRD--YGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 156/336 (46%), Gaps = 20/336 (5%)
Query: 37 GDMNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTF 92
G +NYA+S+FD+++ +PD ++ +++ G N+ + A + M + + + PD
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK--IKPDVI 248
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM 152
TF+ L+ G + ++L+ +++ + + SLI+ + + ++ A Q+F M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 153 LNK----DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL 208
K D+VA+ S+I+ C K ++A+ F M Q G+ + T+ + G +G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 209 AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-------NVIS 261
+ V S + I + N L+ G V++A IF M+ + N+ +
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTY-NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 262 WNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIM 321
+N ++ GL +G +AL +F +M + + + + C G + + +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 322 SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
S+ V+P V Y M+ L R GL EA++L + M
Sbjct: 488 SK--GVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 152/340 (44%), Gaps = 16/340 (4%)
Query: 29 FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVV 88
FC S P ++ + +PD + ++I GF N+ E+A+ +M E +
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV--EMGIK 174
Query: 89 PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMY---GVMKDIETA 145
PD ++ ++ + G V L G+ + SL++ G +D ++
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 146 HQ-LFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGA 204
+ + + + D++ +N++ID V GK+ +A + + M++ + P+ T+ ++
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 205 MGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVI 260
G + R + ++ ++ + + SL++ + KC V++A +IF M K N I
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYT-SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 261 SWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL--CACSHGGFVDEGRRYF 318
++ T+I G G A +F+ M+ V P I VL C C +G +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGV--PPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 319 DIMSRDYN-VQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
D+ R+ + V P + Y ++ L G +E+A ++ ++M
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 136/342 (39%), Gaps = 55/342 (16%)
Query: 104 LGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETA----HQLFEEMLNKDLVA 159
L S LGK + KLG E SLI+ + + +E A +Q+ E + D+V
Sbjct: 125 LASSFLGKMM-----KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVM 179
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
+ +IID L G N AL F +M G+RPD + ++ G GRW
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN-----GLCNSGRW------ 228
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNG 275
+A + R M + +VI++N +I G
Sbjct: 229 -------------------------RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
+A L+ EM++ ++ P+ T+ ++ G VDE R+ F +M P V Y
Sbjct: 264 LDAEELYNEMIRMSIA-PNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVVAYT 321
Query: 336 CMVDLLGRAGLVEEAYILIKNMP---MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL 392
+++ + V++A + M + N I + +L+ G +A++V H++
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 393 E-PCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPEP 433
P + Y +L + G+ + MQ+R + P
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 117/270 (43%), Gaps = 23/270 (8%)
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS 231
++NEALD FT MV+S P F L+ M F ++ C +I VS
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMK--KFDVVINLCDHL-----QIMGVS 104
Query: 232 NSL--VDMYAKCGAVEEAYEIFRSMKGK--------NVISWNTMILGLASHGNGTEALTL 281
+ L ++ C + S GK +++++ ++I G EA+++
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 282 FAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
+M+ E ++PD + + ++ + G V+ FD M +Y ++P V Y +V+ L
Sbjct: 165 VNQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGL 222
Query: 342 GRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHS- 397
+G +A L++ M ++ + I + +L+ A G AE++ ++ + +
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 398 SDYVLLANMYASTGQWNEMSKERRSMQERG 427
Y L N + G +E + M+ +G
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 23/233 (9%)
Query: 132 LIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSG 187
L+++ MK + L + + ++ DL N +++C + A F +M++ G
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 188 MRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI-----TSVSNSLVDMYAKCG 242
PD TF + G + + + E+ + +++D K G
Sbjct: 138 FEPDIVTFT------SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 243 AVEEAYEIFRSMKG----KNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
V A +F M+ +V+ + +++ GL + G +A +L M + ++PD ITF
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK-IKPDVITF 250
Query: 299 LGVLCA-CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
++ A G F+D Y +++ ++ P + Y +++ G V+EA
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIR--MSIAPNIFTYTSLINGFCMEGCVDEA 301
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 165/370 (44%), Gaps = 50/370 (13%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+P+ +NT+I G N+ +AV RM PD FT+ ++ + G + L
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ--PDLFTYGTVVNGLCKRGDIDLA 239
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
L K +E + ++I K++ A LF EM NK ++V +NS+I C
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG-------------------- 206
L G++++A + M++ + P+ TF + A G
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 207 -----ALAFGRWVHSCIQRATYLGEI---------TSVSNSLVDMYAKCGAVEEAYEIFR 252
+L G +H + A ++ E+ N+L+ + K VEE E+FR
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 253 SMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
M + N +++NT+I GL G+ A +F +M+ + V PD IT+ +L
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV-PPDIITYSILLDGLCKY 478
Query: 309 GFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM---ECNAIV 365
G +++ F+ + + ++P + Y M++ + +AG VE+ + L ++ + + N I+
Sbjct: 479 GKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 366 WRSLLAA-CR 374
+ ++++ CR
Sbjct: 538 YTTMISGFCR 547
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 51/308 (16%)
Query: 38 DMNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
++N A+++F +D +P+ +N++IR N + A M E + P+ T
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI--ERKINPNVVT 327
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLI-------------HMYGVM- 139
FS L+ G +V ++L+ +K ++ +SLI HM+ +M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 140 ---------------------KDIETAHQLFEEMLNKDLV----AWNSIIDCLVCCGKYN 174
K +E +LF EM + LV +N++I L G +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 175 EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSL 234
A F +MV G+ PD T+ + L G L V +Q++ +I + N +
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY-NIM 506
Query: 235 VDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
++ K G VE+ +++F S+ K NVI + TMI G G EA LF EM +E+
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM-KEDG 565
Query: 291 VRPDGITF 298
P+ T+
Sbjct: 566 TLPNSGTY 573
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 178/421 (42%), Gaps = 53/421 (12%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
KPD F + T+I G N+ +AV +M Q PD T+ ++ + G + L
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ--PDLVTYGTVVNGLCKRGDIDLA 242
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
L K +E + N++I K ++ A LF EM NK D+ ++S+I C
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG-------------------- 206
L G++++A + M++ + P+ TF + A G
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 207 -----ALAFGRWVHSCIQRATYLGEI---------TSVSNSLVDMYAKCGAVEEAYEIFR 252
+L G +H + A ++ E+ ++L+ + K VEE E+FR
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 253 SMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
M + N +++ T+I G + A +F +M+ V P+ +T+ +L
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV-HPNILTYNILLDGLCKN 481
Query: 309 GFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME---CNAIV 365
G + + F+ + R ++P + Y M++ + +AG VE+ + L N+ ++ N I
Sbjct: 482 GKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLELEPC-HSSDYVLLANMYASTGQWN---EMSKERR 421
+ ++++ G+ + A+ + K + E P +S Y L G E+ KE R
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Query: 422 S 422
S
Sbjct: 601 S 601
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 163/395 (41%), Gaps = 64/395 (16%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQ-GEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
P +N ++ N+ E + ++MQ G H D +T+S + + L
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH---DLYTYSIFINCFCRRSQLSLA 137
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDC 166
+ +KLG E +SL++ Y K I A L ++M+ D + ++I
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
L K +EA+ +MVQ G +PD T+
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTY------------------------------- 226
Query: 227 ITSVSNSLVDMYAKCGAVEEAYEIFRSM-KGK---NVISWNTMILGLASHGNGTEALTLF 282
++V+ K G ++ A + + M KGK +V+ +NT+I GL + + +AL LF
Sbjct: 227 -----GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 283 AEMLQENVVRPDGITFLGVL-CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
EM + +RPD T+ ++ C C++G + D R D++ R N P V + ++D
Sbjct: 282 TEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAF 338
Query: 342 GRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL---EPC 395
+ G + EA L M ++ + + SL+ H + A KH+ EL + C
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA----KHMFELMISKDC 394
Query: 396 HSS--DYVLLANMYASTGQWNEMSKERRSMQERGV 428
+ Y L + + E + R M +RG+
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 51/307 (16%)
Query: 39 MNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTF 94
M+ A+++F +D +PD F ++++I N + A M E + P+ TF
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI--ERKINPNVVTF 331
Query: 95 SFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN 154
S L+ G +V ++L+ +K ++ +SLI+ + + ++ A +FE M++
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 391
Query: 155 KD----LVAWNSIIDCLVCCGKYNEALDFFTRMVQSGM---------------------- 188
KD +V ++++I + E ++ F M Q G+
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 189 -------------RPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
P+ T+ + L G LA V +QR+T +I + N ++
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY-NIMI 510
Query: 236 DMYAKCGAVEEAYEIF--RSMKG--KNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
+ K G VE+ +E+F S+KG NVI++NTMI G G+ EA +L +M +E+
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM-KEDGP 569
Query: 292 RPDGITF 298
P+ T+
Sbjct: 570 LPNSGTY 576
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 163/364 (44%), Gaps = 44/364 (12%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL------ 104
+PD ++++ G+ ++ + AV +M E PDTFTF+ L + GL
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMV--EMGYKPDTFTFTTL---IHGLFLHNKA 204
Query: 105 -GSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVA 159
+V L Q+ + + + V N L DI+ A L ++M + D+V
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR----GDIDLALSLLKKMEKGKIEADVVI 260
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA-CGAMGALAFGRW----- 213
+N+IID L ++AL+ FT M G+RPD T+ +S C +GRW
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN------YGRWSDASR 314
Query: 214 -VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILG 268
+ I+R +T ++L+D + K G + EA +++ M + ++ +++++I G
Sbjct: 315 LLSDMIERKINPNVVT--FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
H EA +F M+ ++ P+ +T+ ++ V+EG F MS+ V
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKV 385
TV Y ++ +A + A ++ K M + N + + LL +G + A V
Sbjct: 432 NTVT-YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 386 RKHL 389
++L
Sbjct: 491 FEYL 494
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 151/333 (45%), Gaps = 17/333 (5%)
Query: 37 GDMNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTF 92
G+ + A+++ ++++K D +++T+I + A+ + M + PD F
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN--KGIRPDVF 276
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM 152
T+S L+ + G +L L+ + + NSLI + + A +LF+EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 153 LNK----DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL 208
+ + ++V +NS+I+ + +EA FT MV PD T+ ++ +
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 209 AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNT 264
G + + R +G T +L+ + + + A +F+ M N++++NT
Sbjct: 397 VDGMELFRDMSRRGLVGN-TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 265 MILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRD 324
++ GL +G +A+ +F E LQ++ + PD T+ + G V++G F +S
Sbjct: 456 LLDGLCKNGKLEKAMVVF-EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 325 YNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
V+P V Y M+ + GL EEAY L M
Sbjct: 515 -GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 141/314 (44%), Gaps = 15/314 (4%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+PD + T++ G N+ +AV +RM PD T+ ++ + G L
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ--PDLVTYGAVINGLCKRGEPDLA 224
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
L K +E + +++I + ++ A LF EM NK D+ ++S+I C
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFG-RWVHSCIQRATYLG 225
L G++++A + M++ + P+ TF + A G L + IQR+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 226 EITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTL 281
+T NSL++ + ++EA +IF M K +V+++NT+I G + + L
Sbjct: 345 IVT--YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 282 FAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
F +M + +V + +T+ ++ D + F M D V P + Y ++D L
Sbjct: 403 FRDMSRRGLV-GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGL 460
Query: 342 GRAGLVEEAYILIK 355
+ G +E+A ++ +
Sbjct: 461 CKNGKLEKAMVVFE 474
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 143/321 (44%), Gaps = 19/321 (5%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+PD + +I G +P+ A+ +M++G+ + D +S ++ + V
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK--IEADVVIYSTVIDSLCKYRHVDDA 259
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHM---YGVMKDIETAHQLFEEML----NKDLVAWNSI 163
L G+ +SLI YG D A +L +ML N ++V +NS+
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD---ASRLLSDMLERKINPNVVTFNSL 316
Query: 164 IDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY 223
ID GK EA F M+Q + P+ T+ ++ L + + + +
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 224 LGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEAL 279
L ++ + N+L++ + K V + E+FR M + N +++ T+I G + A
Sbjct: 377 LPDVVTY-NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 280 TLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVD 339
+F +M+ + V P+ +T+ +L G +++ F+ + + ++P + Y M +
Sbjct: 436 MVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSE 493
Query: 340 LLGRAGLVEEAYILIKNMPME 360
+ +AG VE+ + L ++ ++
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLK 514
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 131/304 (43%), Gaps = 51/304 (16%)
Query: 42 AVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFL 97
A+++F +D +PD F ++++I N + A M E + P+ TF+ L
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML--ERKINPNVVTFNSL 316
Query: 98 LKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKD- 156
+ G ++ ++L ++ ++ + NSLI+ + + ++ A Q+F M++KD
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 157 ---LVAWNSIIDCLVCCGKYNEALDFF--------------------------------- 180
+V +N++I+ K + ++ F
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 181 --TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
+MV G+ P+ T+ L G L V +Q++ +I + N + +
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY-NIMSEGM 495
Query: 239 AKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
K G VE+ +++F S+ K +VI++NTMI G G EA TLF +M +E+ PD
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM-KEDGPLPD 554
Query: 295 GITF 298
T+
Sbjct: 555 SGTY 558
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 108 VLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSI 163
+LGK + KLG NSL++ + I A L ++M+ D V + ++
Sbjct: 122 ILGKMM-----KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 176
Query: 164 IDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY 223
+ L K +EA+ RMV G +PD T +G ++ +R
Sbjct: 177 VHGLFQHNKASEAVALVERMVVKGCQPDLVT---------------YGAVINGLCKR--- 218
Query: 224 LGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFA 283
GE N L M + G +E +V+ ++T+I L + + +AL LF
Sbjct: 219 -GEPDLALNLLNKM--EKGKIEA-----------DVVIYSTVIDSLCKYRHVDDALNLFT 264
Query: 284 EMLQENVVRPDGITFLGVL-CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLG 342
EM + +RPD T+ ++ C C++G + D R D++ R N P V + ++D
Sbjct: 265 EMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN--PNVVTFNSLIDAFA 321
Query: 343 RAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKV 385
+ G + EA L M ++ N + + SL+ H + A+++
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 157/365 (43%), Gaps = 50/365 (13%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
KPD F + T+I G N+ +AV +M Q PD T+ ++ + G + L
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ--PDLVTYGTVVNGLCKRGDIDLA 242
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
L ++ + + N++I + +E A LF EM K ++V +NS+I+C
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH-SCIQRATYLG 225
L G++++A + M++ + P+ TF + A G L +H IQR+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 226 EIT---------------------------------SVSNSLVDMYAKCGAVEEAYEIFR 252
IT N+L++ + KC VE+ E+FR
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 253 SMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLC--ACS 306
M + N +++ T+I G G+ A +F +M+ V P I +L CS
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV--PTDIMTYSILLHGLCS 480
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVW 366
+G +D F + + ++ + Y M++ + +AG V EA+ L ++ ++ + + +
Sbjct: 481 YGK-LDTALVIFKYLQKS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTY 538
Query: 367 RSLLA 371
++++
Sbjct: 539 NTMIS 543
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 144/316 (45%), Gaps = 17/316 (5%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQ-GEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
P +N ++ N+ E + ++MQ G H D +T+S + + L
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH---DLYTYSIFINCFCRRSQLSLA 137
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDC 166
+ +KLG E +SL++ Y K I A L ++M+ D + ++I
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
L K +EA+ +MVQ G +PD T+ ++ G + + + ++ A
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 227 ITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLF 282
+ + N+++D K VE A ++F M+ K NV+++N++I L ++G ++A L
Sbjct: 258 VV-IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 283 AEMLQENVVRPDGITFLGVLCA-CSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
+ ML++ + P+ +TF ++ A G V+ + + +++ R ++ P Y +++
Sbjct: 317 SNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR--SIDPDTITYNLLINGF 373
Query: 342 GRAGLVEEAYILIKNM 357
++EA + K M
Sbjct: 374 CMHNRLDEAKQMFKFM 389
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 9/252 (3%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
P+ +N +I F + +A ++ M Q + PDT T++ L+ + K
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS--IDPDTITYNLLINGFCMHNRLDEAK 383
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLV----AWNSIIDCL 167
Q+ + + N+LI+ + K +E +LF EM + LV + +II
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 168 VCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI 227
G + A F +MV + + D T+ + L + G L + +Q++ I
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 228 TSVSNSLVDMYAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEML 286
+ N++++ K G V EA+++F S+ K +V+++NTMI GL S EA LF +M
Sbjct: 504 F-IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM- 561
Query: 287 QENVVRPDGITF 298
+E+ P+ T+
Sbjct: 562 KEDGTLPNSGTY 573
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 152/336 (45%), Gaps = 16/336 (4%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+PD + T++ G N+ +AV +RM PD T+ ++ + G L
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ--PDLVTYGAVINGLCKRGEPDLA 234
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
L K +E + N++I K ++ A LF +M K D+ +N +I C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
L G++++A + M++ + PD F + A G L ++ + ++ +
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 227 ITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLF 282
N+L+ + K VEE E+FR M + N +++ T+I G + A +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLG 342
+M+ + V PD +T+ +L + G V+ F+ M + +++ + Y M++ L
Sbjct: 415 KQMVSDG-VHPDIMTYNILLDGLCNNGNVETALVVFEYMQK-RDMKLDIVTYTTMIEALC 472
Query: 343 RAGLVEEAYILIKNMPM---ECNAIVWRSLLAA-CR 374
+AG VE+ + L ++ + + N + + ++++ CR
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 159/353 (45%), Gaps = 41/353 (11%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL------- 104
P N+++ GF + N+ +AV +M E PDT TF+ L V GL
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMV--EMGYQPDTVTFTTL---VHGLFQHNKAS 197
Query: 105 GSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSII 164
+V L +++ + + + V N L + +++ + + D+V +N+II
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 165 DCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA-CGAMGALAFGRWVHSCIQRATY 223
D L ++A D F +M G++PD T+ +S C +GRW + +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN------YGRWSDASRLLSDM 311
Query: 224 LGEITSVS----NSLVDMYAKCGAVEEAYEIFRSM-KGK----NVISWNTMILGLASHGN 274
L + + N+L+D + K G + EA +++ M K K +V+++NT+I G +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGF----VDEGRRYFDIMSRDYNVQPT 330
E + +F EM Q +V + +T+ ++ HG F D + F M D V P
Sbjct: 372 VEEGMEVFREMSQRGLV-GNTVTYTTLI----HGFFQARDCDNAQMVFKQMVSD-GVHPD 425
Query: 331 VKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVK 380
+ Y ++D L G VE A ++ + M M+ + + + +++ A G V+
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 23/276 (8%)
Query: 39 MNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTF 94
M+ A +F++++ KPD F +N +I N + A M E ++ PD F
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML--EKNINPDLVFF 323
Query: 95 SFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAH----VRNSLIHMYGVMKDIETAHQLFE 150
+ L+ G +V ++L+ +K H N+LI + K +E ++F
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVK---SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 151 EMLNKDLV----AWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG 206
EM + LV + ++I + A F +MV G+ PD T+ + L G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISW 262
+ V +Q+ +I + + ++++ K G VE+ +++F S+ K NV+++
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYT-TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 263 NTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
TM+ G G EA LF EM +E+ P+ T+
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEM-KEDGPLPNSGTY 534
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 168/386 (43%), Gaps = 49/386 (12%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+P+ +NT+I G N+ +A+ RM PD T+ ++ + G L
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ--PDLVTYGVVVNGLCKRGDTDLA 240
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
L + +E + N++I K ++ A LF+EM K ++V ++S+I C
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
L G++++A + M++ + PD TF + A G L ++ + + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 227 ITSVS----------------------------------NSLVDMYAKCGAVEEAYEIFR 252
I + S N+L+ + K VEE E+FR
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 253 SMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
M + N +++N +I GL G+ A +F EM+ + V P+ +T+ +L
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV-PPNIMTYNTLLDGLCKN 479
Query: 309 GFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM---ECNAIV 365
G +++ F+ + R ++PT+ Y M++ + +AG VE+ + L N+ + + + +
Sbjct: 480 GKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 366 WRSLLAACRTHGNVKLAEKVRKHLLE 391
+ ++++ G+ + A+ + K + E
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKE 564
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 150/366 (40%), Gaps = 83/366 (22%)
Query: 37 GDMNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQG--EPHVV-- 88
GD + A ++ +++++ P ++NT+I G + A+ +K M+ P+VV
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 89 -----------------------------PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
PD FTFS L+ G +V ++L+ +K
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGKYNE 175
++ +SLI+ + + ++ A Q+FE M++K D+V +N++I + E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 176 ALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
++ F M Q G+ + T+ N L+
Sbjct: 415 GMEVFREMSQRGLVGNTVTY------------------------------------NILI 438
Query: 236 DMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
+ G + A EIF+ M N++++NT++ GL +G +A+ +F E LQ + +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKM 497
Query: 292 RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAY 351
P T+ ++ G V++G F +S V+P V Y M+ R G EEA
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 352 ILIKNM 357
L K M
Sbjct: 557 ALFKEM 562
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 150/314 (47%), Gaps = 19/314 (6%)
Query: 39 MNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQ-GEPHVVPDTFT 93
++ AV++F + K P ++ ++ N+ + + ++MQ G PH + +T
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH---NHYT 118
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
+S L+ + L + +KLG E + +SL++ Y K I A L ++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 154 ----NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALA 209
+ V +N++I L K +EA+ RMV G +PD T+ V ++ G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 210 FGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTM 265
+ + +++ L + N+++D K +++A +F+ M+ K NV++++++
Sbjct: 239 LAFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 266 ILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDY 325
I L ++G ++A L ++M+ E + PD TF ++ A G + E + +D M +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK-R 355
Query: 326 NVQPTVKHYGCMVD 339
++ P++ Y +++
Sbjct: 356 SIDPSIVTYSSLIN 369
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 19/320 (5%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
PD + +NT++ G + A+ M Q+G PD +T++ ++ + LG V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD---PDVYTYNSVISGLCKLGEVKEA 349
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
++ + + N+LI +E A +L + +K D+ +NS+I
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
L + A++ F M G PD+ T+ + + + + G L + +++ G
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL---DEALNMLKQMELSGC 466
Query: 227 ITSV--SNSLVDMYAKCGAVEEAYEIFRSMK----GKNVISWNTMILGLASHGNGTEALT 280
SV N+L+D + K EA EIF M+ +N +++NT+I GL +A
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDL 340
L +M+ E +PD T+ +L GG + + M+ + +P + YG ++
Sbjct: 527 LMDQMIMEG-QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISG 584
Query: 341 LGRAGLVEEAYILIKNMPME 360
L +AG VE A L++++ M+
Sbjct: 585 LCKAGRVEVASKLLRSIQMK 604
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 130/278 (46%), Gaps = 24/278 (8%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLG----SV 107
PD +N++I+G T A+ ++ M+ PD FT++ L+ + G ++
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK--GCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 108 VLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSI 163
+ KQ+ S G N+LI + A ++F+EM ++++ V +N++
Sbjct: 456 NMLKQMELS----GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 164 IDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATY 223
ID L + +A +M+ G +PD T+ L+ G + + +Q T
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI---KKAADIVQAMTS 568
Query: 224 LG-EITSVS-NSLVDMYAKCGAVEEAYEIFRS--MKGKNVI--SWNTMILGLASHGNGTE 277
G E V+ +L+ K G VE A ++ RS MKG N+ ++N +I GL TE
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 278 ALTLFAEMLQENVVRPDGITFLGVLCA-CSHGGFVDEG 314
A+ LF EML++N PD +++ V C+ GG + E
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREA 666
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 160/391 (40%), Gaps = 20/391 (5%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
KPD +N +I+ +Q A+L + M +VPD TF+ +++ G +
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK-----DLVAWNSIID 165
++ ++ G N ++H + +E A +EM N+ D +N++++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 166 CLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWV-HSCIQRATYL 224
L G A++ M+Q G PD T+ +S +G + V I R
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 225 GEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALT 280
+T N+L+ K VEEA E+ R + K +V ++N++I GL N A+
Sbjct: 364 NTVT--YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDL 340
LF EM + PD T+ ++ + G +DE M +V Y ++D
Sbjct: 422 LFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLIDG 479
Query: 341 LGRAGLVEEAYILIKNMP---MECNAIVWRSLLAA-CRTHGNVKLAEKVRKHLLELEPCH 396
+A EA + M + N++ + +L+ C++ A+ + + ++E +
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 397 SSDYVLLANMYASTGQWNEMSKERRSMQERG 427
Y L + G + + ++M G
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 16/248 (6%)
Query: 119 KLGVENHAHVRNSLIHMY---GVMKDIETAHQLFEEM-LNKDLVAWNSIIDCLVCCGKYN 174
+ G++ H N ++++ +K +E +H + D+ +N +I L +
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 175 EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS-NS 233
A+ M G+ PD+ TF + G L + Q + ++VS N
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE--QMVEFGCSWSNVSVNV 264
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGK-----NVISWNTMILGLASHGNGTEALTLFAEMLQE 288
+V + K G VE+A + M + + ++NT++ GL G+ A+ + MLQE
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 289 NVVRPDGITFLGVLCACSHGGFVDEGRRYFDIM-SRDYNVQPTVKHYGCMVDLLGRAGLV 347
PD T+ V+ G V E D M +RD P Y ++ L + V
Sbjct: 325 G-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CSPNTVTYNTLISTLCKENQV 381
Query: 348 EEAYILIK 355
EEA L +
Sbjct: 382 EEATELAR 389
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 138/308 (44%), Gaps = 13/308 (4%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+PD + T+I G N+ +AV RM Q P+ T+ ++ + G L
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDTDLA 244
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
L +E + N++I + ++ A LF+EM K ++V ++S+I C
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
L G++++A + M++ + P+ TF + A G ++ + + + +
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 227 ITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLF 282
I + NSLV+ + +++A ++F M K +V+++NT+I G + LF
Sbjct: 365 IFTY-NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLG 342
EM +V D +T+ ++ H G D ++ F M D V P + Y ++D L
Sbjct: 424 REMSHRGLV-GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLC 481
Query: 343 RAGLVEEA 350
G +E+A
Sbjct: 482 NNGKLEKA 489
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 179/414 (43%), Gaps = 78/414 (18%)
Query: 10 RIYQTGFHQNHLVVGKIIV-FCAVSVPAGDMNYAVSVFDRVD----KPDAFLWNTMIRGF 64
R+ Q G N + G ++ C GD + A+++ ++++ + D ++NT+I
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCK----RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 65 GNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVEN 124
+ A+ +K M+ + P+ T+S L+ + CS
Sbjct: 271 CKYRHVDDALNLFKEMET--KGIRPNVVTYSSLISCL-------------CS-------- 307
Query: 125 HAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGKYNEALDFF 180
YG D A QL +M+ N +LV +N++ID V GK+ EA +
Sbjct: 308 -----------YGRWSD---ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 181 TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI---------TSVS 231
M++ + PD T+ +L G +H + +A + E
Sbjct: 354 DDMIKRSIDPDIFTY----------NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQ 287
N+L+ + K VE+ E+FR M + + +++ T+I GL G+ A +F +M+
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 288 ENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLV 347
+ V PD +T+ +L + G +++ FD M + ++ + Y M++ + +AG V
Sbjct: 464 DG-VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKV 521
Query: 348 EEAYILIKNMPM---ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSS 398
++ + L ++ + + N + + ++++ + ++ A + K + E P +S
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 47/255 (18%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
PD F +N+++ GF ++ +KA ++ M + PD T+
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD--CFPDVVTY----------------- 403
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCL 167
N+LI + K +E +LF EM ++ D V + ++I L
Sbjct: 404 ------------------NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 168 VCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI 227
G + A F +MV G+ PD T+ + L G L V +Q++ +I
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 228 TSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFA 283
+ ++++ K G V++ +++F S+ K NV+++NTMI GL S EA L
Sbjct: 506 Y-IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 284 EMLQENVVRPDGITF 298
+M +E+ P+ T+
Sbjct: 565 KM-KEDGPLPNSGTY 578
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 165/380 (43%), Gaps = 37/380 (9%)
Query: 71 EKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGS----VVLGKQLHCSTLKLGVENHA 126
+ A+ + M + P +P F+ LL + + + LG+++ +L + +
Sbjct: 67 DDAIGLFGGMVKSRP--LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ----RLEIVHGL 120
Query: 127 HVRNSLIHMYGVMKDIETAHQLFEEMLN----KDLVAWNSIIDCLVCCGKYNEALDFFTR 182
+ N LI+ + I A L +M+ +V +S+++ + ++A+ +
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 183 MVQSGMRPDDATFVVTLSAC----GAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
MV+ G RPD TF + A A+A V +QR +T +V+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVAL---VDRMVQRGCQPNLVT--YGVVVNGL 235
Query: 239 AKCGAVEEAYEIFRSMKG----KNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
K G + A + M+ +V+ +NT+I L + + +AL LF EM + +RP+
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPN 294
Query: 295 GITFLGVL-CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYIL 353
+T+ ++ C CS+G + D + D++ + N P + + ++D + G EA L
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 354 IKNM---PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSS--DYVLLANMYA 408
+M ++ + + SL+ H + A+++ + ++ + C Y L +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS-KDCFPDVVTYNTLIKGFC 411
Query: 409 STGQWNEMSKERRSMQERGV 428
+ + + ++ R M RG+
Sbjct: 412 KSKRVEDGTELFREMSHRGL 431
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 170/402 (42%), Gaps = 21/402 (5%)
Query: 45 VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGG 103
+ R +P ++++I GF Y+ M + G P PD + L+ +
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP---PDVVIYGVLVDGLSK 473
Query: 104 LGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVA 159
G ++ + L + + V NSLI + + + A ++F M + D+
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
+ +++ + G+ EAL F RM + G+ PD + + A G + +Q
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 220 RATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM-KGK---NVISWNTMILGLASHGNG 275
R +I +V N ++ + KC +E+A + F ++ +GK +++++NTMI G S
Sbjct: 594 RNKISADI-AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 276 TEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYG 335
EA +F E+L+ P+ +T ++ +D R F IM+ + +P YG
Sbjct: 653 DEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVTYG 710
Query: 336 CMVDLLGRAGLVEEAYILIKNMP---MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE- 391
C++D ++ +E ++ L + M + + + + ++ G V A + ++
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 392 -LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPE 432
L P Y +L Y G+ E + M GVK +
Sbjct: 771 KLLP-DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 157/382 (41%), Gaps = 51/382 (13%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
+ H + + GF + K++ +V V D P+ + T+I GF
Sbjct: 238 DFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+ ++A +K M+Q + PD +S L+ G + +G +L L GV+
Sbjct: 298 KRGEMDRAFDLFKVMEQ--RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGKYNEALDFFT 181
V +S I +Y D+ TA +++ ML + ++V + +I L G+ EA +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
++++ GM P T+ +SL+D + KC
Sbjct: 416 QILKRGMEPSIVTY------------------------------------SSLIDGFCKC 439
Query: 242 GAVEEAYEIFRSM----KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
G + + ++ M +V+ + ++ GL+ G A+ +ML ++ +R + +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS-IRLNVVV 498
Query: 298 FLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYIL---I 354
F ++ DE + F +M Y ++P V + ++ + G +EEA L +
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGI-YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 355 KNMPMECNAIVWRSLLAACRTH 376
M +E +A+ + +L+ A H
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKH 579
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 149/331 (45%), Gaps = 18/331 (5%)
Query: 56 LWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHC 115
++N MIR N ++A + MQ+ PD T+ L+ G G L
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWS--CKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 116 STLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCG 171
L+ + N+LI+ G + A ++ ++M + DLV N ++
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG--ALAFGRWVHSCIQRATYLGEITS 229
+Y++AL +F M + +RPD TF + + +G + A + +RA ++ +
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEM 285
+ S++ +Y+ G +E +F +M + N++S+N ++ A HG AL++ ++
Sbjct: 323 FT-SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 286 LQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAG 345
Q ++ PD +++ +L + + + F +M R +P V Y ++D G G
Sbjct: 382 KQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 346 LVEEAYILIKNMP---MECNAIVWRSLLAAC 373
+ EA + + M ++ N + +LLAAC
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 50/333 (15%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+PD +N +I Q +A+ + M++ PD TF+ ++ + G +
Sbjct: 280 RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENC 339
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMY-------------------GVMKDIET------- 144
+ + + + G++ + N+L+ Y G++ D+ +
Sbjct: 340 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 399
Query: 145 ---------AHQLF----EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPD 191
A ++F +E ++V +N++ID G EA++ F +M Q G++P+
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 192 DATFVVTLSACGAMGALAFGRWVHSCIQ-RATYLGEITSVSNSLVDMYAKCGAVEEAYEI 250
+ L+AC V S Q R L T+ NS + Y +E+A +
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN--TAAYNSAIGSYINAAELEKAIAL 517
Query: 251 FRSMKGKNV----ISWNTMILGLASHGNGTEALTLFAEMLQENVVRP-DGITFLGVLCAC 305
++SM+ K V +++ +I G EA++ EM E++ P + VLCA
Sbjct: 518 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM--EDLSIPLTKEVYSSVLCAY 575
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV 338
S G V E F+ M + +P V Y M+
Sbjct: 576 SKQGQVTEAESIFNQM-KMAGCEPDVIAYTSML 607
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 201/459 (43%), Gaps = 54/459 (11%)
Query: 10 RIYQTGFHQNHLVVGKIIVFCA---VSVPAGDMNYAVSVFDRV----DKPDAFLWNTMIR 62
+++ H+ V ++VF + V V +GD+ A V+ R+ P+ + +I+
Sbjct: 342 KLFSQALHKG--VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 63 GFGNTNQPEKAVLFYKR-MQQG-EPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
G + +A Y + +++G EP +V T+S L+ G++ G L+ +K+
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIV----TYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 121 GVENHAHVRNSLIHMYGVMKD-----------IETAHQLFEEMLNKDLVAWNSIIDCLVC 169
G + +YGV+ D + + ++ + + ++V +NS+ID
Sbjct: 456 GYPPD-------VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 170 CGKYNEALDFFTRMVQSGMRPDDATFVVTLSA-------CGAMGALAFGRWVHSCIQRAT 222
+++EAL F M G++PD ATF + C M G + +QR
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNK 567
Query: 223 YLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM-KGK---NVISWNTMILGLASHGNGTEA 278
+I +V N ++ + KC +E+A + F ++ +GK +++++NTMI G S EA
Sbjct: 568 ISADI-AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 626
Query: 279 LTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV 338
+F E+L+ P+ +T ++ +D R F IM+ + +P YGC++
Sbjct: 627 ERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVTYGCLM 684
Query: 339 DLLGRAGLVEEAYILIKNMP---MECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE--LE 393
D ++ +E ++ L + M + + + + ++ G V A + ++ L
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 744
Query: 394 PCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVKKPE 432
P Y +L Y G+ E + M GVK +
Sbjct: 745 P-DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 189/445 (42%), Gaps = 29/445 (6%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFG 65
+ H + + GF + K++ +V V D P+ + T+I GF
Sbjct: 238 DFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 66 NTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENH 125
+ ++A +K M+Q + PD +S L+ G + +G +L L GV+
Sbjct: 298 KRGEMDRAFDLFKVMEQ--RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 126 AHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGKYNEALDFFT 181
V +S I +Y D+ TA +++ ML + ++V + +I L G+ EA +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 182 RMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKC 241
++++ GM P T+ + G L G ++ + + Y ++ + LVD +K
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV-IYGVLVDGLSKQ 474
Query: 242 GAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGIT 297
G + A M G+ NV+ +N++I G EAL +F ++ ++PD T
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVAT 533
Query: 298 FLGVL-------CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
F V+ C H G + FD+M R+ + + ++ LL + +E+A
Sbjct: 534 FTTVMRVSIMEDAFCKHMK-PTIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDA 591
Query: 351 YILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLLANMY 407
N+ ME + + + +++ + + AE++ + LL++ P + V L +
Sbjct: 592 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE-LLKVTP-FGPNTVTLTILI 649
Query: 408 ASTGQWNEMSKERRS---MQERGVK 429
+ N+M R M E+G K
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSK 674
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 152/386 (39%), Gaps = 79/386 (20%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+PD+F +NT+I G N+ +AV RM PD T+ ++ + G + L
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ--PDLVTYGIVVNGLCKRGDIDLA 240
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
L + +E + N++I K++ A LF EM NK ++V +NS+I C
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG-------------------- 206
L G++++A + M++ + P+ TF + A G
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 207 -----ALAFGRWVHSCIQRATYLGEI---------TSVSNSLVDMYAKCGAVEEAYEIFR 252
+L G +H + A ++ E+ N+L+ + K V+E E+FR
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 253 SMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
M + N +++ T+I G A +F +M+ + V+ PD +T+ +L +
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSILLDGLCNN 479
Query: 309 GFVDEGRRYFDIMSRD--------YN--------------------------VQPTVKHY 334
G V+ F+ + R YN V+P V Y
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 335 GCMVDLLGRAGLVEEAYILIKNMPME 360
M+ R GL EEA L + M E
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEE 565
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 134/308 (43%), Gaps = 51/308 (16%)
Query: 38 DMNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
++N A+++F +D +P+ +N++IR N + A M E + P+ T
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI--ERKINPNVVT 328
Query: 94 FSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
FS L+ G +V ++L+ +K ++ +SLI+ + + ++ A +FE M+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 154 NKD----LVAWNSIIDCLVCCGKYNEALDFF----------------------------- 180
+KD +V +N++I + +E ++ F
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 181 ------TRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSL 234
+MV G+ PD T+ + L G + V +QR+ +I + N +
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY-NIM 507
Query: 235 VDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
++ K G VE+ +++F S+ K NV+++ TM+ G G EA LF EM +E
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 291 VRPDGITF 298
+ PD T+
Sbjct: 568 L-PDSGTY 574
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 167/370 (45%), Gaps = 44/370 (11%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL------ 104
+PD N+++ GF + N+ AV +M E PD+FTF+ L + GL
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMV--EMGYQPDSFTFNTL---IHGLFRHNRA 202
Query: 105 -GSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVA 159
+V L ++ + + + V N L DI+ A L ++M + +V
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR----GDIDLALSLLKKMEQGKIEPGVVI 258
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW------ 213
+N+IID L N+AL+ FT M G+RP+ T+ +L C +GRW
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY-NSLIRC----LCNYGRWSDASRL 313
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGL 269
+ I+R +T ++L+D + K G + EA +++ M + ++ +++++I G
Sbjct: 314 LSDMIERKINPNVVT--FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
H EA +F M+ ++ P+ +T+ ++ VDEG F MS+ V
Sbjct: 372 CMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Query: 330 TVKHYGCMVDLLGRAGLVEEAYILIKNMPME---CNAIVWRSLLAACRTHGNVKLAEKVR 386
TV Y ++ +A + A I+ K M + + + + LL +G V+ A V
Sbjct: 431 TVT-YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 387 KHLL--ELEP 394
++L ++EP
Sbjct: 490 EYLQRSKMEP 499
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 149/331 (45%), Gaps = 18/331 (5%)
Query: 56 LWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHC 115
++N MIR N ++A + MQ+ PD T+ L+ G G L
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCK--PDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 116 STLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCG 171
L+ + N+LI+ G + A ++ ++M + DLV N ++
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG--ALAFGRWVHSCIQRATYLGEITS 229
+Y++AL +F M + +RPD TF + + +G + A + +RA ++ +
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEM 285
+ S++ +Y+ G +E +F +M + N++S+N ++ A HG AL++ ++
Sbjct: 191 FT-SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 286 LQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAG 345
Q ++ PD +++ +L + + + F +M R +P V Y ++D G G
Sbjct: 250 KQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 346 LVEEAYILIKNMP---MECNAIVWRSLLAAC 373
+ EA + + M ++ N + +LLAAC
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 50/333 (15%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+PD +N +I Q +A+ + M++ PD TF+ ++ + G +
Sbjct: 148 RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENC 207
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMY-------------------GVMKDIET------- 144
+ + + + G++ + N+L+ Y G++ D+ +
Sbjct: 208 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 267
Query: 145 ---------AHQLF----EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPD 191
A ++F +E ++V +N++ID G EA++ F +M Q G++P+
Sbjct: 268 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 192 DATFVVTLSACGAMGALAFGRWVHSCIQ-RATYLGEITSVSNSLVDMYAKCGAVEEAYEI 250
+ L+AC V S Q R L T+ NS + Y +E+A +
Sbjct: 328 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN--TAAYNSAIGSYINAAELEKAIAL 385
Query: 251 FRSMKGKNV----ISWNTMILGLASHGNGTEALTLFAEMLQENVVRP-DGITFLGVLCAC 305
++SM+ K V +++ +I G EA++ EM E++ P + VLCA
Sbjct: 386 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM--EDLSIPLTKEVYSSVLCAY 443
Query: 306 SHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV 338
S G V E F+ M + +P V Y M+
Sbjct: 444 SKQGQVTEAESIFNQM-KMAGCEPDVIAYTSML 475
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/448 (20%), Positives = 177/448 (39%), Gaps = 85/448 (18%)
Query: 60 MIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
+ + F ++++ +K MQ+ + P+ ++ ++ ++G G + ++
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQR-QIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPS 169
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCG-KYN 174
GV +LI+ YG ET+ +L + M N+ ++ +N++I+ G +
Sbjct: 170 QGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWE 229
Query: 175 EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS--- 231
L F M G++PD T+ LSAC G V + + ++T+ S
Sbjct: 230 GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 232 -------------------------------NSLVDMYAKCGAVEEAYEIFRSMKG---- 256
N L++ YAK G+++EA +F M+
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 257 -----------------------------------KNVISWNTMILGLASHGNGTEALTL 281
+ ++N +I G E +TL
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 282 FAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
F +M++EN + PD T+ G++ AC GG ++ R+ M+ + ++ P+ K Y +++
Sbjct: 410 FHDMVEEN-IEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAF 467
Query: 342 GRAGLVEEAYILIKNM-PMECNAIV--WRSLLAACRTHGNVKLAEKVRKHLLELE-PCHS 397
G+A L EEA + M + N + + SLL + G VK +E + L++ P +
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 398 SDYVLLANMYASTGQWNEMSKERRSMQE 425
+ Y G++ E K M++
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 159/397 (40%), Gaps = 53/397 (13%)
Query: 7 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK----PDAFLWNTMIR 62
+ A + G + + ++ CA+ G + A VF ++ PD ++ ++
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIR---GLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
FG + EK M G +PD +++ LL+ GS+ + G
Sbjct: 291 TFGKLRRLEKVCDLLGEMASG--GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEALD 178
+A+ + L++++G + QLF EM + D +N +I+ G + E +
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMG--------------------ALAFGRWVHSCI 218
F MV+ + PD T+ + ACG G + A+ + +
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 219 QRATY------------LGEITSVS--NSLVDMYAKCGAVEEAYEIFRSMKG----KNVI 260
Q A Y +G S+ +SL+ +A+ G V+E+ I + +N
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRD 528
Query: 261 SWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDI 320
++N I G EA+ + +M +++ PD T VL S VDE R F+
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDM-EKSRCDPDERTLEAVLSVYSFARLVDECREQFEE 587
Query: 321 MSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
M + ++ P++ Y M+ + G+ ++ L++ M
Sbjct: 588 M-KASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 19/328 (5%)
Query: 36 AGDMNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDT 91
A +N A++VF+++ KPD + T+I + A+ Y+RMQ G + PDT
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG--GLSPDT 469
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE 151
FT+S ++ +G G + +L C + G + N ++ ++ ++ + A +L+ +
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 152 MLN----KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
M N D V ++ +++ L CG EA FT M Q PD+ + + + G G
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 208 LAFG-RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV-ISWNTM 265
+ +W + + L NSL+ + + + EAYE+ ++M + S T
Sbjct: 590 VEKAWQWYQAMLHAG--LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Query: 266 ILGLASHGNGTEALTL-FAEMLQENVVRPDGITFLGVLCACSHGGFV-DEGRRYFDIM-S 322
L L+ +G L + F L + P + L + A G V + + D+M S
Sbjct: 648 TLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHS 707
Query: 323 RDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
D + + +VD L ++G EEA
Sbjct: 708 EDRESKRGL--VDAVVDFLHKSGQKEEA 733
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 11/245 (4%)
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGKYNEA 176
G ++ H +++ G K ++L +EM+ + V +N +I NEA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
++ F +M ++G +PD T+ + G L ++ +Q A L T + +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ-AGGLSPDTFTYSVIIN 477
Query: 237 MYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
K G + A+++F M + N++++N M+ A N AL L+ +M Q
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFE 536
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYI 352
PD +T+ V+ H G+++E F M + N P YG +VDL G+AG VE+A+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 353 LIKNM 357
+ M
Sbjct: 596 WYQAM 600
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 19/328 (5%)
Query: 36 AGDMNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDT 91
A +N A++VF+++ KPD + T+I + A+ Y+RMQ G + PDT
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG--GLSPDT 469
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE 151
FT+S ++ +G G + +L C + G + N ++ ++ ++ + A +L+ +
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 152 MLN----KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
M N D V ++ +++ L CG EA FT M Q PD+ + + + G G
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 208 LAFG-RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV-ISWNTM 265
+ +W + + L NSL+ + + + EAYE+ ++M + S T
Sbjct: 590 VEKAWQWYQAMLHAG--LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Query: 266 ILGLASHGNGTEALTL-FAEMLQENVVRPDGITFLGVLCACSHGGFV-DEGRRYFDIM-S 322
L L+ +G L + F L + P + L + A G V + + D+M S
Sbjct: 648 TLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHS 707
Query: 323 RDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
D + + +VD L ++G EEA
Sbjct: 708 EDRESKRGL--VDAVVDFLHKSGQKEEA 733
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 11/245 (4%)
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGKYNEA 176
G ++ H +++ G K ++L +EM+ + V +N +I NEA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
++ F +M ++G +PD T+ + G L ++ +Q A L T + +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ-AGGLSPDTFTYSVIIN 477
Query: 237 MYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
K G + A+++F M + N++++N M+ A N AL L+ +M Q
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFE 536
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYI 352
PD +T+ V+ H G+++E F M + N P YG +VDL G+AG VE+A+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 353 LIKNM 357
+ M
Sbjct: 596 WYQAM 600
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 19/328 (5%)
Query: 36 AGDMNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDT 91
A +N A++VF+++ KPD + T+I + A+ Y+RMQ G + PDT
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG--GLSPDT 469
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE 151
FT+S ++ +G G + +L C + G + N ++ ++ ++ + A +L+ +
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 152 MLN----KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
M N D V ++ +++ L CG EA FT M Q PD+ + + + G G
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 208 LAFG-RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV-ISWNTM 265
+ +W + + L NSL+ + + + EAYE+ ++M + S T
Sbjct: 590 VEKAWQWYQAMLHAG--LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Query: 266 ILGLASHGNGTEALTL-FAEMLQENVVRPDGITFLGVLCACSHGGFV-DEGRRYFDIM-S 322
L L+ +G L + F L + P + L + A G V + + D+M S
Sbjct: 648 TLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHS 707
Query: 323 RDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
D + + +VD L ++G EEA
Sbjct: 708 EDRESKRGL--VDAVVDFLHKSGQKEEA 733
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 11/245 (4%)
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGKYNEA 176
G ++ H +++ G K ++L +EM+ + V +N +I NEA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
++ F +M ++G +PD T+ + G L ++ +Q A L T + +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ-AGGLSPDTFTYSVIIN 477
Query: 237 MYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
K G + A+++F M + N++++N M+ A N AL L+ +M Q
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFE 536
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYI 352
PD +T+ V+ H G+++E F M + N P YG +VDL G+AG VE+A+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 353 LIKNM 357
+ M
Sbjct: 596 WYQAM 600
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 11/245 (4%)
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGKYNEA 176
G ++ H +++ G K ++L +EM+ + V +N +I EA
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
++ F +M ++G PD T+ + G L ++ +Q A L T + +++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG-LSPDTFTYSVIIN 472
Query: 237 MYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
K G + A+ +F M G+ N++++N MI A N AL L+ +M Q +
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM-QNAGFQ 531
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYI 352
PD +T+ V+ H GF++E F M R N P YG +VDL G+AG V++A+
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK-NWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 353 LIKNM 357
+ M
Sbjct: 591 WYQAM 595
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 18/278 (6%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
KP+ +N +I +G N ++A+ + +MQ E PD T+ L+ I G + +
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ--EAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
++ + G+ + +I+ G + AH+LF EM+ + +LV +N +I
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 508
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
Y AL + M +G +PD T+ + + G G L V + +QR ++ +
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
Query: 227 ITSVSNSLVDMYAKCGAVEEAYEIFRSMKG----KNVISWNTMILGLASHGNGTEALTLF 282
V LVD++ K G V++A++ +++M NV + N+++ +EA L
Sbjct: 569 -EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDI 320
ML + P T+ +L C+ + R FD+
Sbjct: 628 QSMLALG-LHPSLQTYTLLLSCCT------DARSNFDM 658
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 22/330 (6%)
Query: 37 GDMNY---AVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVP 89
G NY A++VF+++ + PD + T+I + A+ Y+RMQ E + P
Sbjct: 405 GRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ--EAGLSP 462
Query: 90 DTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLF 149
DTFT+S ++ +G G + +L C + G + N +I ++ ++ ETA +L+
Sbjct: 463 DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLY 522
Query: 150 EEMLN----KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAM 205
+M N D V ++ +++ L CG EA F M + PD+ + + + G
Sbjct: 523 RDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKA 582
Query: 206 GALAFG-RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV-ISWN 263
G + +W + +Q L NSL+ + + + EAY + +SM + S
Sbjct: 583 GNVDKAWQWYQAMLQAG--LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 264 TMILGLASHGNGTEALTL-FAEMLQENVVRPDGITFLGVLCACSHGGFV-DEGRRYFDIM 321
T L L+ + + F L P + L + A G V D + D M
Sbjct: 641 TYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFM 700
Query: 322 -SRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
S D + + +VD L ++GL EEA
Sbjct: 701 HSEDRESKRGL--MDAVVDFLHKSGLKEEA 728
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 34 VPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM---QQGEPHVVPD 90
V G ++ +FDR+ D W + G E A + M Q +P
Sbjct: 134 VSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIP- 192
Query: 91 TFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV--ENHAHVRNSLIHMYGVMKDIETAHQL 148
++ +LK + LGKQ+H KLG E +++ SLI YG + +E A+ +
Sbjct: 193 SWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLV 252
Query: 149 FEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACG--AMG 206
++ N + VAW + + G++ E + F M G++ + + F L AC + G
Sbjct: 253 LHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDG 312
Query: 207 ALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVIS-WNTM 265
+ G+ VH+ + + + + L++MY K G V++A ++F+S K + +S WN M
Sbjct: 313 GRS-GQQVHANAIKLGFESDCL-IRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAM 370
Query: 266 ILGLASHGNGTEALTLFAEM 285
+ +G EA+ L +M
Sbjct: 371 VASYMQNGIYIEAIKLLYQM 390
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 5 KEIHARIYQTGF--HQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIR 62
K++HA ++ GF ++ + G +I F D N V ++ + W +
Sbjct: 213 KQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANL---VLHQLSNANTVAWAAKVT 269
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIV-----GGLGSVVLGKQLHCST 117
+ ++ + + M G + + FS +LK GG G+Q+H +
Sbjct: 270 NDYREGEFQEVIRDFIEM--GNHGIKKNVSVFSNVLKACSWVSDGGRS----GQQVHANA 323
Query: 118 LKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVA-WNSIIDCLVCCGKYNEA 176
+KLG E+ +R LI MYG ++ A ++F+ ++ V+ WN+++ + G Y EA
Sbjct: 324 IKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEA 383
Query: 177 LDFFTRMVQSGMRPDDA 193
+ +M +G++ D
Sbjct: 384 IKLLYQMKATGIKAHDT 400
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 139/326 (42%), Gaps = 46/326 (14%)
Query: 36 AGDMNYAVSVFDRVD-KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGE--PHVV---- 88
AG++N A+SV DR+ PD +NT++R ++ + ++A+ RM Q + P V+
Sbjct: 185 AGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 89 ---------------------------PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
PD T++ L+ + G + + G
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGKYNEAL 177
+ + N ++ A +L +ML K +V +N +I+ L G A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 178 DFFTRMVQSGMRPDDATFVVTLSA-CGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
D +M Q G +P+ ++ L C ++ + R Y +T N+++
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT--YNTMLT 422
Query: 237 MYAKCGAVEEAYEIFRSMKGKN----VISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
K G VE+A EI + K +I++NT+I GLA G +A+ L EM ++ ++
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD-LK 481
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYF 318
PD IT+ ++ S G VDE ++F
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFF 507
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 145/351 (41%), Gaps = 33/351 (9%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
PD +N MI G+ + A+ RM V PD T++ +L+ + G L +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGK--LKQ 222
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAH--QLFEEMLNK----DLVAWNSIID 165
+ L + + V I + +D H +L +EM ++ D+V +N +++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 166 CLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTL-SACGAMGALAFGRWVHSCIQRATYL 224
+ G+ +EA+ F M SG +P+ T + L S C GRW+ + A L
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST------GRWMDAEKLLADML 336
Query: 225 GEITSVS----NSLVDMYAKCGAVEEAYEIFRSMK----GKNVISWNTMILGLASHGNGT 276
+ S S N L++ + G + A +I M N +S+N ++ G
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
A+ M+ PD +T+ +L A G V++ + +S P + Y
Sbjct: 397 RAIEYLERMVSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNT 454
Query: 337 MVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEK 384
++D L +AG +A L+ M ++ + I + SL+ G V A K
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 127/328 (38%), Gaps = 85/328 (25%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
PD T+IRGF + KA + ++ VPD T+
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGS--GAVPDVITY----------------- 175
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM-LNKDLVAWNSIIDCLVCC 170
N +I Y +I A + + M ++ D+V +N+I+ L
Sbjct: 176 ------------------NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDS 217
Query: 171 GKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSV 230
GK +A++ RM+Q PD T+ +
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTI--------------------------------- 244
Query: 231 SNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEML 286
L++ + V A ++ M+ + +V+++N ++ G+ G EA+ +M
Sbjct: 245 ---LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 287 QENVVRPDGITFLGVL-CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAG 345
+P+ IT +L CS G ++D + D++ + ++ P+V + +++ L R G
Sbjct: 302 SSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS--PSVVTFNILINFLCRKG 358
Query: 346 LVEEAYILIKNMPM---ECNAIVWRSLL 370
L+ A +++ MP + N++ + LL
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLL 386
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 166/372 (44%), Gaps = 23/372 (6%)
Query: 1 MNHLKEIHARIYQTGFHQNHLVVGKIIV-FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNT 59
+N ++ R+ GF + + G ++ C + G ++ A +F R+ KP+ ++NT
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI----GRVDAAKDLFYRIPKPEIVIFNT 358
Query: 60 MIRGFGNTNQPE--KAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCST 117
+I GF + + KAVL G +VPD T++ L+ G V L ++
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYG---IVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 118 LKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKY 173
G + + + L+ + + I+ A+ + EM L + V +N +I +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 174 NEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW-VHSCIQRATYLGEITSVSN 232
EA++ F M + G +PD TF +S + + W + I +T N
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT--YN 533
Query: 233 SLVDMYAKCGAVEEAYEIFRSM--KGKNV--ISWNTMILGLASHGNGTEALTLFAEMLQE 288
+L++ + + G ++EA ++ M +G + I++N++I GL G +A +LF +ML++
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 289 NVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVE 348
P I+ ++ G V+E + M P + + +++ L RAG +E
Sbjct: 594 GHA-PSNISCNILINGLCRSGMVEEAVEFQKEMVL-RGSTPDIVTFNSLINGLCRAGRIE 651
Query: 349 EAYILIKNMPME 360
+ + + + E
Sbjct: 652 DGLTMFRKLQAE 663
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 127/323 (39%), Gaps = 48/323 (14%)
Query: 73 AVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSL 132
A +FY + + P P FTF ++K + + L K G ++ + +L
Sbjct: 202 ANVFYDMLSRKIP---PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 133 IHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGM 188
IH + A QL EEM D +N +I L + NEA RM+ G
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 189 RPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAY 248
PDD T+ L++ K G V+ A
Sbjct: 319 APDDITY------------------------------------GYLMNGLCKIGRVDAAK 342
Query: 249 EIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
++F + ++ +NT+I G +HG +A + ++M+ + PD T+ ++
Sbjct: 343 DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 309 GFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP---MECNAIV 365
G V M R+ +P V Y +VD + G ++EAY ++ M ++ N +
Sbjct: 403 GLVGLALEVLHDM-RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 366 WRSLLAA-CRTHGNVKLAEKVRK 387
+ L++A C+ H + E R+
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFRE 484
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 55/295 (18%)
Query: 29 FCAVSVPAGDMNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGE 84
FC + G ++ A +V + + KP+ +N +I F ++ +AV ++ M +
Sbjct: 434 FCKL----GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR-- 487
Query: 85 PHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIET 144
PD +TF+ L+ + + + L + GV + N+LI+ + +I+
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 145 AHQLFEEMLNK----DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLS 200
A +L EM+ + D + +NS+I L G+ ++A F +M++ G P +
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI------- 600
Query: 201 ACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM----KG 256
SC N L++ + G VEEA E + M
Sbjct: 601 ---------------SC--------------NILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 257 KNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFV 311
+++++N++I GL G + LT+F + LQ + PD +TF ++ GGFV
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRK-LQAEGIPPDTVTFNTLMSWLCKGGFV 685
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 150/334 (44%), Gaps = 18/334 (5%)
Query: 37 GDMNYAVSVFDRV----DKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTF 92
G+ N A+++F+ KP+ L+NT+I+G N +A M E ++P+
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS--EKGLIPEVQ 427
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM 152
TF+ L+ + +G V L + G N LIH Y +E A ++ + M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 153 LNK----DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL 208
L+ D+ +NS+++ L K+ + ++ + MV+ G P+ TF + L + L
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 209 AFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVIS-----WN 263
+ ++ + + + +L+D + K G ++ AY +FR M+ +S +N
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFG-TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
+I N T A LF EM+ + + PDG T+ ++ G V+ G ++ M
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMV-DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM 357
+ + P++ G +++ L V EA +I M
Sbjct: 666 NGFI-PSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 18/281 (6%)
Query: 29 FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTN-QPEKAVLFYKRMQQGEPHV 87
FC S P + ++ + + + + T++ GF N + E LF K + G
Sbjct: 156 FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLC 215
Query: 88 VPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQ 147
+ TF+ LL+++ G V ++L +K GV + N I +++ A +
Sbjct: 216 LS---TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 148 ----LFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA-C 202
L E+ D++ +N++I L K+ EA + +MV G+ PD T+ ++ C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 203 -GAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK---- 257
G M LA R V + + T SL+D G A +F GK
Sbjct: 333 KGGMVQLA-ERIVGDAVFNGFVPDQFT--YRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 258 NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
NVI +NT+I GL++ G EA L EM ++ ++ P+ TF
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI-PEVQTF 429
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 173/393 (44%), Gaps = 35/393 (8%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
+ ++R ++ + + A+ + M + P +P F F+ LL + + L L
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRP--LPSIFEFNKLLSAIAKMKKFDLVISLGEK 110
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLN----KDLVAWNSIIDCLVCCGK 172
+LG+ ++ + N LI+ + I A L +M+ +V +S+++ +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 173 YNEALDFFTRMVQSGMRPDDATFVVTLSAC----GAMGALAFGRWVHSCIQRATYLGEIT 228
++A+ +MV+ G RPD TF + A A+A V +QR +T
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL---VDRMVQRGCQPNLVT 227
Query: 229 SVSNSLVDMYAKCGAVEEAYEIFRSMKG----KNVISWNTMILGLASHGNGTEALTLFAE 284
+V+ K G ++ A+ + M+ NV+ ++T+I L + + +AL LF E
Sbjct: 228 --YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 285 MLQENVVRPDGITFLGVL-CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
M + VRP+ IT+ ++ C C++ + D R D++ R N P V + ++D +
Sbjct: 286 M-ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN--PNVVTFNALIDAFVK 342
Query: 344 AGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL---EPCHS 397
G + EA L M ++ + + SL+ H + A KH+ EL + C
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA----KHMFELMISKDCFP 398
Query: 398 S--DYVLLANMYASTGQWNEMSKERRSMQERGV 428
+ Y L N + + +E + R M +RG+
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 166/403 (41%), Gaps = 69/403 (17%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+PD + T+I G N+ +AV RM Q P+ T+ ++ + G + L
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDIDLA 244
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK--------------- 155
L +E + + +++I + + A LF EM NK
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 156 ------------------------DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPD 191
++V +N++ID V GK EA + M++ + PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 192 DATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI---------TSVSNSLVDMYAKCG 242
T+ +L G +H + A ++ E+ N+L++ + K
Sbjct: 365 IFTY----------SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 243 AVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
++E E+FR M + N +++ T+I G + A +F +M+ + V P+ +T+
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIMTY 473
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+L G +++ F+ + R ++PT+ Y M++ + +AG VE+ + L ++
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 359 M---ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSS 398
+ + + I++ ++++ G + A+ + + + E P S
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 159/358 (44%), Gaps = 20/358 (5%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+P ++++ G+ + + AV +M E PDT TF+ L+ +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMV--EMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDC 166
L ++ G + + +++ DI+ A L +M + ++V ++++ID
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA-CGAMGALAFGRWVHSCIQRATYLG 225
L ++AL+ FT M G+RP+ T+ +S C R + I+R
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 226 EITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTL 281
+T N+L+D + K G + EA +++ M + ++ +++++I G H EA +
Sbjct: 330 VVT--FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 282 FAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
F M+ ++ P+ +T+ ++ +DEG F MS+ V TV Y ++
Sbjct: 388 FELMISKDCF-PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT-YTTLIHGF 445
Query: 342 GRAGLVEEAYILIKNMPME---CNAIVWRSLLAACRTHGNVKLAEKVRKHLL--ELEP 394
+A + A ++ K M + N + + +LL +G ++ A V ++L ++EP
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 163/390 (41%), Gaps = 56/390 (14%)
Query: 53 DAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGS------ 106
D + + ++I F N+ + +AV +K+M+ E P T++ +L + G +G+
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKME--EDGCKPTLITYNVILNVFGKMGTPWNKIT 264
Query: 107 ---------------------VVLGKQ--LHCSTLKLGVENHAH-------VRNSLIHMY 136
+ K+ LH ++ E A N+L+ +Y
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 137 GVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDD 192
G + A ++ EM+ + +V +NS+I G +EA++ +M + G +PD
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 193 ATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFR 252
T+ LS G + + ++ A I + N+ + MY G E +IF
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF-NAFIKMYGNRGKFTEMMKIFD 443
Query: 253 SMK----GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHG 308
+ ++++WNT++ +G +E +F EM + V P+ TF ++ A S
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRC 502
Query: 309 GFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP---MECNAIV 365
G ++ + M D V P + Y ++ L R G+ E++ ++ M + N +
Sbjct: 503 GSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 366 WRSLLAACRTHGNV----KLAEKVRKHLLE 391
+ SLL A + LAE+V ++E
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 17/309 (5%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
P +N++I + ++A+ + Q E PD FT++ LL G V
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMEL--KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCL 167
+ G + + N+ I MYG ++F+E+ L+ D+V WN+++
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 168 VCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI 227
G +E F M ++G P+ TF +SA G+ V+ + A ++
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 228 TSVSNSLVDMYAKCGAVEEAYEIFRSMKG----KNVISWNTMILGLASHGNGTEA--LTL 281
S N+++ A+ G E++ ++ M+ N +++ ++ L ++ NG E +
Sbjct: 525 -STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL---LHAYANGKEIGLMHS 580
Query: 282 FAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLL 341
AE + V+ P + ++ CS + E R F + ++ P + MV +
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIY 639
Query: 342 GRAGLVEEA 350
GR +V +A
Sbjct: 640 GRRQMVAKA 648
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 48/292 (16%)
Query: 132 LIHMYGVMKDIETAHQLF----EEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSG 187
+I M G + +A +F E+ + D+ ++ S+I G+Y EA++ F +M + G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 188 MRPDDATFVVTLSACGAMGA----------------LAFGRWVH----SCIQRATYLGEI 227
+P T+ V L+ G MG +A + + +C +R + E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 228 TSV---------------SNSLVDMYAKCGAVEEAYEIFRSMK----GKNVISWNTMILG 268
V N+L+D+Y K +EA ++ M +++++N++I
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 269 LASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQ 328
A G EA+ L +M E +PD T+ +L G V+ F+ M R+ +
Sbjct: 359 YARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNAGCK 416
Query: 329 PTVKHYGCMVDLLGRAGLVEEAYILIKNMP---MECNAIVWRSLLAACRTHG 377
P + + + + G G E + + + + + W +LLA +G
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 134/314 (42%), Gaps = 13/314 (4%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
P+ +NT+I + E+A+ Y+RM V PD T++ +L + G +
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDA--GVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVC-- 169
++ + + SL+H Y K+I H L EE+ + + ++ LV
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 170 --CGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEI 227
C EA F+ + + G PD T +S G +A V ++ + +
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 228 TSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFA 283
+ NSL+ M+++ ++ EI R + K ++IS+NT+I + +A +F+
Sbjct: 665 ATY-NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 284 EMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
EM +V PD IT+ + + + +E M + + +P Y +VD +
Sbjct: 724 EMRNSGIV-PDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCK 781
Query: 344 AGLVEEAYILIKNM 357
+EA + ++++
Sbjct: 782 LNRKDEAKLFVEDL 795
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 28/346 (8%)
Query: 37 GDMNY-AVSVFDRV----DKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDT 91
GD Y A+ +FD++ KP+ ++NT+I G + Q + A+ RM++ + PD
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK--DGIGPDV 221
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE 151
T++ L+ + G ++ K + N+LI + A + +EE
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 152 M----LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
M L+ D+V ++ +I L + +EA + F MV G PD T+ + ++
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 208 LAFG-RWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMK----GKNVISW 262
+ G + QR +T L+ Y + G + A EIFR M N+I++
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTY--TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 263 NTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF-LGVLCACSHGGFVDEGRRYFDIM 321
N ++ GL +G +AL + A+M Q+N + D +T+ + + C G D Y +
Sbjct: 400 NVLLHGLCDNGKIEKALVILADM-QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 322 SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM------PMEC 361
+ + P + Y M+ L + GL EA L + M P EC
Sbjct: 459 CQ--GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 153/348 (43%), Gaps = 28/348 (8%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQ-GEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
P ++ ++ + + + +++MQ G PH + T + LL + L
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPH---NLCTCNILLNCFCRCSQLSLA 135
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDC 166
+KLG E SL++ + + A +F++M+ ++V +N+IID
Sbjct: 136 LSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG 195
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRW-----VHSCIQRA 221
L + + ALD RM + G+ PD T+ +S G + GRW + SC+ +
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS-----GLCSSGRWSDATRMVSCMTKR 250
Query: 222 TYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTE 277
++ + N+L+D K G V EA E + M + ++++++ +I GL + E
Sbjct: 251 EIYPDVFTF-NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 278 ALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCM 337
A +F M+ + PD +T+ ++ V+ G + F MS+ V+ TV Y +
Sbjct: 310 AEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT-YTIL 367
Query: 338 VDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLA 382
+ RAG + A + + M + N I + LL +G ++ A
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 163/409 (39%), Gaps = 75/409 (18%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG- 110
PD + +I G + E+A+ F RM+ +P+ T+S LL G L LG
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATS--CLPNVVTYSTLL--CGCLNKKQLGR 355
Query: 111 -KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----------------- 152
K++ + G + NSL+H Y D A++L ++M
Sbjct: 356 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 153 --------LNKDL--------------------VAWNSIIDCLVCCGKYNEALDFFTRMV 184
LN DL + +S CL GKY +A M+
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475
Query: 185 QSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAV 244
G PD +T+ L+ + + ++R + ++ + + +VD + K G +
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT-IMVDSFCKAGLI 534
Query: 245 EEAYEIFRSMK----GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLG 300
E+A + F M+ NV+++ +I + A LF ML E + P+ +T+
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL-PNIVTYSA 593
Query: 301 VLCACSHGGFVDEGRRYFDIMS---------------RDYNVQPTVKHYGCMVDLLGRAG 345
++ G V++ + F+ M D + +P V YG ++D ++
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 346 LVEEAYILIKNMPME-C--NAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
VEEA L+ M ME C N IV+ +L+ G + A++V+ + E
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 166/382 (43%), Gaps = 43/382 (11%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
PD ++ ++ N ++ E A L ++ M++G +V D +T++ ++ G + +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRG--GLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCL 167
+ ++G + +LIH Y K + A++LFE ML++ ++V ++++ID
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 168 VCCGKYNEALDFFTRMVQSGMRPD-DATF-----------VVTLSACGAMGALAFGRWVH 215
G+ +A F RM S PD D F VVT GAL G
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT------YGALLDGFCKS 652
Query: 216 SCIQRATYLGEITS---------VSNSLVDMYAKCGAVEEAYEIFRSMK----GKNVISW 262
++ A L + S V ++L+D K G ++EA E+ M + ++
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 263 NTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMS 322
+++I A + ++ML EN P+ + + ++ G DE + +M
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM- 770
Query: 323 RDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGNV 379
+ QP V Y M+D G G +E L++ M + N + +R L+ C +G +
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 380 KLAEKVRKHLLELE-PCHSSDY 400
+A + + + + P H++ Y
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGY 852
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 175/423 (41%), Gaps = 55/423 (13%)
Query: 10 RIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQ 69
++ TG + GK+I C+ S+ D+ DA + ++ G ++
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSA---------YRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 70 PEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVR 129
+ A ++ M+ + PD F++ L+ LG++ + ++ G+ + +
Sbjct: 608 VDDAEEIFREMRG--KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 130 NSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
N L+ + +IE A +L +EM L+ + V + +IID G EA F M
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 186 SGMRPDDATFVVTLSACGAMGALA-----FGRWVHSCIQRATYLGEITSVSNSLVDMYAK 240
G+ PD + + C + + FG C T+ N+L++ K
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS-------TAPFNALINWVFK 778
Query: 241 CGAVEEAYEIF-RSMKGK-------NVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
G E E+ R M G N +++N MI L GN A LF +M N++
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM- 837
Query: 293 PDGITFLGVLCACSHGGFVDEGRR--YFDIMSRDY--NVQPTVKHYGCMVDLLGRAGLVE 348
P IT+ +L G+ GRR F + ++P Y +++ + G+
Sbjct: 838 PTVITYTSLL-----NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 349 EAYILIKNMPMECNAI---------VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD 399
+A +L+ M + NA+ R+LL+ G +++AEKV ++++ L+ S
Sbjct: 893 KALVLVDQMFAK-NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Query: 400 YVL 402
V+
Sbjct: 952 TVI 954
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 168/396 (42%), Gaps = 55/396 (13%)
Query: 37 GDMNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTF 92
G M A ++FD + P A + ++I G+ + M++ ++V +
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK--RNIVISPY 418
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM 152
T+ ++K + G + + + G + + +LI + A ++ +EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 153 ----LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDAT-------------- 194
+ D+ +NS+I L + +EA F MV++G++P+ T
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 195 -----FVVTLSACGAMGALAF-----------GRWVHSCIQRAT-----YLGEITSVSNS 233
+V + CG + G+ + +C + LG+ + +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT-V 597
Query: 234 LVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQEN 289
L++ K V++A EIFR M+GK +V S+ +I G + GN +A ++F EM++E
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 290 VVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEE 349
+ P+ I + +L G +++ + D MS + P Y ++D ++G + E
Sbjct: 658 LT-PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-GLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 350 AYILIKNMPME---CNAIVWRSLLAACRTHGNVKLA 382
A+ L M ++ ++ V+ +L+ C +V+ A
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 165/389 (42%), Gaps = 58/389 (14%)
Query: 39 MNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTF 94
+N A+ +F + K P +N ++ + + + K+M+ + D +TF
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV--LGIRNDLYTF 123
Query: 95 SFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML- 153
+ ++ V L + LKLG E SL++ + + A L ++M+
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 154 ---NKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSA-CGAMGALA 209
D+VA+N+IID L + N+A DFF + + G+RP+ T+ ++ C +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 210 FGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSM--------------- 254
R + I++ IT ++L+D + K G V EA E+F M
Sbjct: 244 AARLLSDMIKKKITPNVIT--YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 255 ----------------------KG--KNVISWNTMILGLASHGNGTEALTLFAEMLQENV 290
KG +V+S+NT+I G + + LF EM Q +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 291 VRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
V + +T+ ++ G VD+ + +F M + + P + Y ++ L G +E+A
Sbjct: 362 V-SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKA 419
Query: 351 YILIKNM---PMECNAIVWRSLL-AACRT 375
++ ++M M+ + + + +++ C+T
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 162/368 (44%), Gaps = 24/368 (6%)
Query: 7 IHARIYQTGFHQNHLVVGKIIV-FCAVSVPAGDMNYAVSVFDRVD----KPDAFLWNTMI 61
I ++ + G+ + + +G ++ FC ++ AVS+ D++ KPD +N +I
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCR----RNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
T + A F+K +++ + P+ T++ L+ + +L +K
Sbjct: 198 DSLCKTKRVNDAFDFFKEIER--KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEAL 177
+ + ++L+ + + A +LFEEM ++ D+V ++S+I+ L + +EA
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 178 DFFTRMVQSGMRPDDATFVVTLSA-CGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
F MV G D ++ ++ C A + QR +T N+L+
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT--YNTLIQ 373
Query: 237 MYAKCGAVEEAYEIFRSMK----GKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
+ + G V++A E F M ++ ++N ++ GL +G +AL +F +M Q+ +
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-QKREMD 432
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYI 352
D +T+ V+ G V+E F +S ++P + Y M+ L GL+ E
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Query: 353 LIKNMPME 360
L M E
Sbjct: 492 LYTKMKQE 499
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 46/256 (17%)
Query: 139 MKDIE--TAHQLFEEMLNK----DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDD 192
++DI+ A LF +M+ +V +N ++ +V KY+ + +M G+R D
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 193 ATFVVT-------------LSACGAMGALAF-------GRWVHSCIQRATYLGEITSVS- 231
TF + LS G M L + G V+ +R ++ V
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 232 -------------NSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGN 274
N+++D K V +A++ F+ ++ K NV+++ ++ GL +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
++A L ++M+++ + P+ IT+ +L A G V E + F+ M R ++ P + Y
Sbjct: 241 WSDAARLLSDMIKKKIT-PNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSIDPDIVTY 298
Query: 335 GCMVDLLGRAGLVEEA 350
+++ L ++EA
Sbjct: 299 SSLINGLCLHDRIDEA 314
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 137/343 (39%), Gaps = 51/343 (14%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
KPD L+N +I F ++A+ K MQ+ P T TF ++ G +
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR--PTTRTFMPIIHGYAKSGDMRRS 608
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVA----WNSIIDC 166
++ + G H N LI+ + +E A ++ +EM + A + I+
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
G +A ++FTR+ G+ D T+ L AC
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC------------------------ 704
Query: 227 ITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV----ISWNTMILGLASHGNGTEALTLF 282
K G ++ A + + M +N+ +N +I G A G+ EA L
Sbjct: 705 ------------CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI 752
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLG 342
+M +E V+PD T+ + ACS G ++ + + M V+P +K Y ++
Sbjct: 753 QQMKKEG-VKPDIHTYTSFISACSKAGDMNRATQTIEEME-ALGVKPNIKTYTTLIKGWA 810
Query: 343 RAGLVEEA---YILIKNMPMECNAIVWRSLLAACRTHGNVKLA 382
RA L E+A Y +K M ++ + V+ LL + + ++ A
Sbjct: 811 RASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 150/345 (43%), Gaps = 17/345 (4%)
Query: 49 VDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVV 108
+D P A +++TM+ G+ +K ++ +KR++ E P T+ L+ + +G +
Sbjct: 445 IDAPIA-IYHTMMDGYTMVADEKKGLVVFKRLK--ECGFTPTVVTYGCLINLYTKVGKIS 501
Query: 109 LGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSII 164
++ + GV+++ + +I+ + +KD A +FE+M+ + D++ +N+II
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 165 DCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYL 224
G + A+ M + RP TF+ + G + V ++R +
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 225 GEITSVSNSLVDMYAKCGAVEEAYEIFRSMK----GKNVISWNTMILGLASHGNGTEALT 280
+ + N L++ + +E+A EI M N ++ ++ G AS G+ +A
Sbjct: 622 PTVHTF-NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Query: 281 LFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDL 340
F LQ + D T+ +L AC G + MS N+ Y ++D
Sbjct: 681 YFTR-LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS-ARNIPRNSFVYNILIDG 738
Query: 341 LGRAGLVEEAYILIKNMPME---CNAIVWRSLLAACRTHGNVKLA 382
R G V EA LI+ M E + + S ++AC G++ A
Sbjct: 739 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 195/483 (40%), Gaps = 95/483 (19%)
Query: 37 GDMNYAVSVFDRVDKPDAF---------LWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHV 87
GD Y + + +++K + F +NT++ ++ Y M+ E V
Sbjct: 157 GDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY--MEMLEDKV 214
Query: 88 VPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQ 147
P+ +T++ ++ LG+V Q ++ G++ SLI Y KD+++A +
Sbjct: 215 CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 148 LFEEM----LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTL-SAC 202
+F EM ++ VA+ +I L + +EA+D F +M P T+ V + S C
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 203 GA------------MGALAFGRWVHS--------CIQ-----RATYLGEITS-------- 229
G+ M +H+ C Q LG++
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGK-------------------------------- 257
N+L++ Y K G +E+A ++ M+ +
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 454
Query: 258 ------NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFV 311
+V+++N++I G GN A L + M +V PD T+ ++ + V
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV-PDQWTYTSMIDSLCKSKRV 513
Query: 312 DEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM-PMEC--NAIVWRS 368
+E FD + + V P V Y ++D +AG V+EA+++++ M C N++ + +
Sbjct: 514 EEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 369 LLAACRTHGNVKLAEKVRKHLLE--LEPCHSSDYVLLANMYASTGQWNEMSKERRSMQER 426
L+ G +K A + + +++ L+P S+D +L+ + G ++ + M
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD-GDFDHAYSRFQQMLSS 631
Query: 427 GVK 429
G K
Sbjct: 632 GTK 634
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 178/436 (40%), Gaps = 48/436 (11%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIV-FCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRG 63
+E+ ++ + G N + +I +C + ++ + R P+ +N +I+G
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 64 FGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVE 123
+ +N + + K +++ V+PD T++ L+ G+ +L G+
Sbjct: 438 YCKSNVHKAMGVLNKMLER---KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 124 NHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEALDF 179
S+I K +E A LF+ + +N ++V + ++ID GK +EA
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 180 FTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNS--LVDM 237
+M+ P+ TF + A G L + ++ +G +VS L+
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE---EKMVKIGLQPTVSTDTILIHR 611
Query: 238 YAKCGAVEEAYEIFRSM----KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRP 293
K G + AY F+ M + ++ T I G +A + A+M +EN V P
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSP 670
Query: 294 DGITFLGVLCACSHGGFVDEGRR--YFDIMSR--DYNVQPT-------VKHY-------- 334
D T+ ++ G+ D G+ FD++ R D +P+ +KH
Sbjct: 671 DLFTYSSLI-----KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 335 -GCMVDLLGRAGLVEEAYI--LIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKVRKH 388
G +L + ++E + L++ M + NA + L+ GN+++AEKV H
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 389 LLELEPCHSSDYVLLA 404
+ E S+ V A
Sbjct: 786 MQRNEGISPSELVFNA 801
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK-------PDAFLWN 58
E+ ++I++ G VV +++ V G + + D +K PD F +N
Sbjct: 428 EMLSKIHEKG------VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN 481
Query: 59 TMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTL 118
+I FG + ++A+ ++ +++ + PD +++ L+ +G G V
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSD--CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ 539
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGKYN 174
+ G+ ++L+ +G + +E A+ LFEEML K ++V +N ++DCL G+
Sbjct: 540 EKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTA 599
Query: 175 EALDFFTRMVQSGMRPDDATFVV 197
EA+D +++M Q G+ PD T+ V
Sbjct: 600 EAVDLYSKMKQQGLTPDSITYTV 622
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 199/476 (41%), Gaps = 64/476 (13%)
Query: 2 NHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVD-KPDAFLWNTM 60
+ ++ I + ++ H N V +I F + D+ + + + D K ++F + +
Sbjct: 153 DRVRSILDSMVKSNVHGNISTVNILIGFFGNT---EDLQMCLRLVKKWDLKMNSFTYKCL 209
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
++ + + KA Y +++G + D F ++ LL L Q+ K
Sbjct: 210 LQAYLRSRDYSKAFDVYCEIRRGGHKL--DIFAYNMLL---DALAKDEKACQVFEDMKKR 264
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDL----VAWNSIIDCLVCCGKYNEA 176
+ +I G + + A LF EM+ + L V +N+++ L ++A
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
+ F+RMV++G RP++ T+ + L+ A G L V +R G + + LV
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG----IYSYLVR 380
Query: 237 MYAKCGAVEEAYEIFRSM-----KGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVV 291
+K G V EA+ +F M KG+ S+ +M+ L G EA+ + +++ ++ VV
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFPVKGER-DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVV 439
Query: 292 ----------------------------------RPDGITFLGVLCACSHGGFVDEGRRY 317
PD T+ ++ + G VDE
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINI 499
Query: 318 FDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP---MECNAIVWRSLLAACR 374
F+ + R + +P + Y +++ LG+ G V+EA++ K M + + + + +L+
Sbjct: 500 FEELERS-DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 375 THGNVKLAEKVRKHLLELEPCHSS--DYVLLANMYASTGQWNEMSKERRSMQERGV 428
V++A + + +L ++ C + Y +L + G+ E M+++G+
Sbjct: 559 KTERVEMAYSLFEEML-VKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 161/387 (41%), Gaps = 60/387 (15%)
Query: 8 HARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSVFDRVDK----PDAFLWNTMIR 62
+ I GF N V ++ FC G+++ A VFD + K P +NT+I
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCK----EGNISDAQKVFDEITKRSLQPTVVSFNTLIN 283
Query: 63 GFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGV 122
G+ ++ +M++ PD FT+S L+ + + L K G+
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTR--PDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341
Query: 123 ENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGKYNEALD 178
+ + +LIH + +I+ + +++ML+K D+V +N++++ G A +
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 179 FFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMY 238
M++ G+RPD T+ +L+D +
Sbjct: 402 IVDGMIRRGLRPDKITYT------------------------------------TLIDGF 425
Query: 239 AKCGAVEEAYEIFRSMKGKNV----ISWNTMILGLASHGNGTEALTLFAEMLQENVVRPD 294
+ G VE A EI + M + + ++ ++ G+ G +A EML+ ++PD
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG-IKPD 484
Query: 295 GITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILI 354
+T+ ++ A G G + M D +V P+V Y +++ L + G ++ A +L+
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLL 543
Query: 355 K---NMPMECNAIVWRSLLAACRTHGN 378
N+ + + I + +LL H N
Sbjct: 544 DAMLNIGVVPDDITYNTLLEGHHRHAN 570
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 185/465 (39%), Gaps = 90/465 (19%)
Query: 13 QTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFL----WNTMIRGFGNTN 68
+ GF N +V +I + AG +N A+ + D + L +NT+I+G+
Sbjct: 358 KKGFPPNVIVYNNLI---DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 69 QPEKAVLFYKRMQQGEPHVVPDTFT-----------FSFLLKIVG-----------GLGS 106
Q + A K M +V +FT F L+ VG GL +
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 107 VVL------GKQLHCSTLKL-------GVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
++ GK H L+L G N+L+H ++ A ++ +E+L
Sbjct: 475 TLISGLCKHGK--HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 154 NK----DLVAWNSIIDCLVCCGK--YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
+ D V++N++I CCGK +EA F MV+ G++PD+ T+ + + M
Sbjct: 533 GRGCVMDRVSYNTLISG--CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 208 LAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV----ISWN 263
+ +R L ++ + S ++D K EE E F M KNV + +N
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYS-VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
+I G + AL L +M + + P+ T+ ++ S V+E + F+ M R
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGI-SPNSATYTSLIKGMSIISRVEEAKLLFEEM-R 707
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAE 383
++P V HY ++D G+ G + + L++ M
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM-------------------------- 741
Query: 384 KVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGV 428
H + P + Y ++ YA G E S+ M+E+G+
Sbjct: 742 ----HSKNVHP-NKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 182/424 (42%), Gaps = 67/424 (15%)
Query: 20 HLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVL 75
+L I FC G + AV +F ++++ P+ +NT+I G G + ++A +
Sbjct: 261 YLFTTAINAFCK----GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 76 FYKRMQQGEPHVVPDTFTFSFLLKIV-------------------GGLGSVVLGKQLHCS 116
F ++M E + P T+S L+K + G +V++ L S
Sbjct: 317 FKEKMV--ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 117 TLKLGVENHA----------------HVRNSLIHMYGVMKDIETAHQLFEEML----NKD 156
++ G N A N+LI Y + A +L +EML N +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 157 LVAWNSIIDCLVCCG-KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG--ALAFGRW 213
++ S+I CL+C ++ AL F M+ M P +S G + A W
Sbjct: 435 QGSFTSVI-CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGL 269
+ + + T SN+L+ + G ++EA+ I + + G+ + +S+NT+I G
Sbjct: 494 FQF-LNKGFVVD--TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
EA EM++ ++PD T+ ++C + V+E +++D R+ + P
Sbjct: 551 CGKKKLDEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLP 608
Query: 330 TVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAA-CRTHGNVKLAEKV 385
V Y M+D +A EE M ++ N +V+ L+ A CR+ G + +A ++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS-GRLSMALEL 667
Query: 386 RKHL 389
R+ +
Sbjct: 668 REDM 671
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 38/272 (13%)
Query: 45 VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGG 103
V DRV +NT+I G + ++A +F M ++G + PD +T+S L+ +
Sbjct: 537 VMDRVS------YNTLISGCCGKKKLDEAFMFLDEMVKRG---LKPDNYTYSILICGLFN 587
Query: 104 LGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDL----VA 159
+ V Q + G+ + + +I + E + F+EM++K++ V
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
+N +I G+ + AL+ M G+ P+ AT+ +L G + S ++
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT----------SLIKGMSIISRVE 697
Query: 220 RATYLGEITSVS---------NSLVDMYAKCGAVEEAYEIFRSMKGKNV----ISWNTMI 266
A L E + +L+D Y K G + + + R M KNV I++ MI
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
G A GN TEA L EM ++ +V PD IT+
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIV-PDSITY 788
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEA 176
GV ++ + I+ + +E A +LF +M + ++V +N++ID L CG+Y+EA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
F +MV+ GM P T+ + + + +V + + + + V N+L+D
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI-VYNNLID 373
Query: 237 MYAKCGAVEEAYEIFRSM--KGKNVIS--WNTMILGLASHGNGTEALTLFAEMLQENVVR 292
+ + G++ +A EI M KG ++ S +NT+I G +G A L EML
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 293 PDGITFLGVLC-ACSHGGFVDEGRRY 317
G +F V+C CSH F D R+
Sbjct: 434 NQG-SFTSVICLLCSHLMF-DSALRF 457
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 185/465 (39%), Gaps = 90/465 (19%)
Query: 13 QTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFL----WNTMIRGFGNTN 68
+ GF N +V +I + AG +N A+ + D + L +NT+I+G+
Sbjct: 358 KKGFPPNVIVYNNLI---DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 69 QPEKAVLFYKRMQQGEPHVVPDTFT-----------FSFLLKIVG-----------GLGS 106
Q + A K M +V +FT F L+ VG GL +
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 107 VVL------GKQLHCSTLKL-------GVENHAHVRNSLIHMYGVMKDIETAHQLFEEML 153
++ GK H L+L G N+L+H ++ A ++ +E+L
Sbjct: 475 TLISGLCKHGK--HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 154 NK----DLVAWNSIIDCLVCCGK--YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
+ D V++N++I CCGK +EA F MV+ G++PD+ T+ + + M
Sbjct: 533 GRGCVMDRVSYNTLISG--CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 208 LAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV----ISWN 263
+ +R L ++ + S ++D K EE E F M KNV + +N
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYS-VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
+I G + AL L +M + + P+ T+ ++ S V+E + F+ M R
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGI-SPNSATYTSLIKGMSIISRVEEAKLLFEEM-R 707
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAE 383
++P V HY ++D G+ G + + L++ M
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM-------------------------- 741
Query: 384 KVRKHLLELEPCHSSDYVLLANMYASTGQWNEMSKERRSMQERGV 428
H + P + Y ++ YA G E S+ M+E+G+
Sbjct: 742 ----HSKNVHP-NKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 182/424 (42%), Gaps = 67/424 (15%)
Query: 20 HLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVL 75
+L I FC G + AV +F ++++ P+ +NT+I G G + ++A +
Sbjct: 261 YLFTTAINAFCK----GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 76 FYKRMQQGEPHVVPDTFTFSFLLKIV-------------------GGLGSVVLGKQLHCS 116
F ++M E + P T+S L+K + G +V++ L S
Sbjct: 317 FKEKMV--ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 117 TLKLGVENHA----------------HVRNSLIHMYGVMKDIETAHQLFEEML----NKD 156
++ G N A N+LI Y + A +L +EML N +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 157 LVAWNSIIDCLVCCG-KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG--ALAFGRW 213
++ S+I CL+C ++ AL F M+ M P +S G + A W
Sbjct: 435 QGSFTSVI-CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 214 VHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGL 269
+ + + T SN+L+ + G ++EA+ I + + G+ + +S+NT+I G
Sbjct: 494 FQF-LNKGFVVD--TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 270 ASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQP 329
EA EM++ ++PD T+ ++C + V+E +++D R+ + P
Sbjct: 551 CGKKKLDEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLP 608
Query: 330 TVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAA-CRTHGNVKLAEKV 385
V Y M+D +A EE M ++ N +V+ L+ A CR+ G + +A ++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS-GRLSMALEL 667
Query: 386 RKHL 389
R+ +
Sbjct: 668 REDM 671
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 38/272 (13%)
Query: 45 VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGG 103
V DRV +NT+I G + ++A +F M ++G + PD +T+S L+ +
Sbjct: 537 VMDRVS------YNTLISGCCGKKKLDEAFMFLDEMVKRG---LKPDNYTYSILICGLFN 587
Query: 104 LGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDL----VA 159
+ V Q + G+ + + +I + E + F+EM++K++ V
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ 219
+N +I G+ + AL+ M G+ P+ AT+ +L G + S ++
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT----------SLIKGMSIISRVE 697
Query: 220 RATYLGEITSVS---------NSLVDMYAKCGAVEEAYEIFRSMKGKNV----ISWNTMI 266
A L E + +L+D Y K G + + + R M KNV I++ MI
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 267 LGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
G A GN TEA L EM ++ +V PD IT+
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIV-PDSITY 788
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEA 176
GV ++ + I+ + +E A +LF +M + ++V +N++ID L CG+Y+EA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
F +MV+ GM P T+ + + + +V + + + + V N+L+D
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI-VYNNLID 373
Query: 237 MYAKCGAVEEAYEIFRSM--KGKNVIS--WNTMILGLASHGNGTEALTLFAEMLQENVVR 292
+ + G++ +A EI M KG ++ S +NT+I G +G A L EML
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 293 PDGITFLGVLC-ACSHGGFVDEGRRY 317
G +F V+C CSH F D R+
Sbjct: 434 NQG-SFTSVICLLCSHLMF-DSALRF 457
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 26/304 (8%)
Query: 57 WNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
+ MI G ++AV+ M + + PD T+S L+ +G K++ C
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSK--DGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEML----NKDLVAWNSIIDCLVCCGK 172
++G+ + + ++LI+ M ++ A +++E M+ +D +N ++ L GK
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 173 YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITS--V 230
EA +F M G+ P+ +F ++ G G G S T +G +
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE---GLKAFSVFDEMTKVGHHPTFFT 620
Query: 231 SNSLVDMYAKCGAVEEAYEIFRSM----KGKNVISWNTMILGLASHGNGTEALTLFAEML 286
SL+ K G + EA + +S+ + + +NT++ + GN +A++LF EM+
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680
Query: 287 QENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIM-----SRDYNVQPTVKHYGCMVDLL 341
Q +++ PD T+ ++ G +G+ I+ NV P Y C VD +
Sbjct: 681 QRSIL-PDSYTYTSLI-----SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734
Query: 342 GRAG 345
+AG
Sbjct: 735 FKAG 738
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 147/383 (38%), Gaps = 49/383 (12%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
P +NT++ + + + A+ M+ V D T++ L+ + + G
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKS--KGVDADVCTYNMLIHDLCRSNRIAKGY 323
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDL----VAWNSIIDCL 167
L K + + N+LI+ + + A QL EML+ L V +N++ID
Sbjct: 324 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 168 VCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVH-------SCIQR 220
+ G + EAL F M G+ P + ++ V L R + C+ R
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 221 ATYLGEITSVS---------------------------NSLVDMYAKCGAVEEAYE---- 249
TY G I + ++L++ + K G + A E
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 250 IFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGG 309
I+R N I ++T+I G EA+ ++ M+ E R D TF ++ + G
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-DHFTFNVLVTSLCKAG 562
Query: 310 FVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPM---ECNAIVW 366
V E + M+ D + P + C+++ G +G +A+ + M +
Sbjct: 563 KVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 621
Query: 367 RSLLAACRTHGNVKLAEKVRKHL 389
SLL G+++ AEK K L
Sbjct: 622 GSLLKGLCKGGHLREAEKFLKSL 644
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 113/250 (45%), Gaps = 25/250 (10%)
Query: 74 VLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLI 133
+L RM H++ + L ++ G S V G + +T +L N + V + LI
Sbjct: 121 ILVRARMYDPARHILKE-------LSLMSGKSSFVFGALM--TTYRLCNSNPS-VYDILI 170
Query: 134 HMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMR 189
+Y I+ + ++F M N + N+I+ +V G+ F M++ +
Sbjct: 171 RVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKIC 230
Query: 190 PDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYE 249
PD ATF + ++ A G+ ++ ++++ Y I + N+++ Y K G + A E
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY-NTVLHWYCKKGRFKAAIE 289
Query: 250 IFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCAC 305
+ MK K +V ++N +I L + L +M ++ ++ P+ +T+ ++
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM-RKRMIHPNEVTYNTLI--- 345
Query: 306 SHGGFVDEGR 315
GF +EG+
Sbjct: 346 --NGFSNEGK 353
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 174/406 (42%), Gaps = 56/406 (13%)
Query: 36 AGDMNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKA--VLFYKRMQQGEPHVV- 88
A ++ AV +F+ ++K P + +NTMI G+G+ + ++A +L +R + P V+
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345
Query: 89 -----------------------------PDTFTFSFLLKIVGGLGSVVLGKQLHCSTLK 119
P+ T++ L+ ++ G + +L S K
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 120 LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGKYNE 175
G+ + N ++ + ++ A +FEEM K D + + S+ID L G+ ++
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 176 ALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLV 235
A + +M+ S R + + + G G ++ + ++ + N+ +
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL-QLLNTYM 524
Query: 236 DMYAKCGAVEEAYEIFRSMKGKNVI----SWNTMILGLASHGNGTEALTLFAEMLQENVV 291
D K G E+ +F +K + + S++ +I GL G E LF M ++ V
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 292 ---RPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVE 348
R I G C C G V++ + + M + +PTV YG ++D L + ++
Sbjct: 585 LDTRAYNIVIDG-FCKC---GKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 349 EAYILI---KNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE 391
EAY+L K+ +E N +++ SL+ G + A + + L++
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 165/412 (40%), Gaps = 60/412 (14%)
Query: 36 AGDMNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDT 91
AG ++ A + D + K P+ N M+ + + ++A ++ M PD
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY--KVCTPDE 447
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE 151
TF L+ +G +G V +++ L ++ V SLI + E H+++++
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 152 MLNK----DLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
M+N+ DL N+ +DC+ G+ + F + PD ++ + + G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG- 566
Query: 208 LAFGRWVHSCIQRATYLGEI--TSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVIS 261
F + G + T N ++D + KCG V +AY++ MK K V++
Sbjct: 567 --FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 262 WNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIM 321
+ ++I GLA EA LF E
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEE------------------------------------- 647
Query: 322 SRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRTHGN 378
++ ++ V Y ++D G+ G ++EAY++++ + + N W SLL A
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 379 VKLAEKVRKHLLELE-PCHSSDYVLLANMYASTGQWNEMSKERRSMQERGVK 429
+ A + + EL+ + Y +L N ++N+ + MQ++G+K
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 40/340 (11%)
Query: 94 FSFLLKIVGGLGSV-------VLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAH 146
FS ++G +V L +Q+ +LG E H+ +LI + +++A
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQ----ELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 147 QLFEEM----LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSAC 202
L +EM L+ D+V +N ID GK + A FF + +G++PD+ T+
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT------ 277
Query: 203 GAMGALAFGRWVHSCIQRATYLGE-----ITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK 257
+G L + ++ +L + T N+++ Y G +EAY + + K
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 258 ----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDE 313
+VI++N ++ L G EAL +F EM ++ P+ T+ ++ G +D
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD--AAPNLSTYNILIDMLCRAGKLDT 395
Query: 314 GRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMEC---NAIVWRSLL 370
D M + + P V+ MVD L ++ ++EA + + M + + I + SL+
Sbjct: 396 AFELRDSMQK-AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 371 AACRTHGNVKLAEKVRKHLLELEPCHSSDYV---LLANMY 407
G V A KV + +L+ + C ++ V L+ N +
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSD-CRTNSIVYTSLIKNFF 493
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 154/394 (39%), Gaps = 54/394 (13%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+P L+ T+IRGF + + A+ M+ + D ++ + G +G V +
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS--SLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLV----AWNSIIDC 166
+ G++ S+I + ++ A ++FE + V A+N++I
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGE 226
GK++EA R G P + L+ MG + V +++
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA--AP 375
Query: 227 ITSVSNSLVDMYAKCGAVEEAYEIFRSMKG----KNVISWNTMILGLASHGNGTEALTLF 282
S N L+DM + G ++ A+E+ SM+ NV + N M+ L EA +F
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 283 AEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLG 342
EM V PD ITF CS ++D LG
Sbjct: 436 EEM-DYKVCTPDEITF------CS------------------------------LIDGLG 458
Query: 343 RAGLVEEAYILIKNM-PMEC--NAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD 399
+ G V++AY + + M +C N+IV+ SL+ HG + K+ K ++ + C S D
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN-QNC-SPD 516
Query: 400 YVLLANMYASTGQWNEMSKERRSMQERGVKKPEP 433
LL + E K R +E ++ P
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 19/244 (7%)
Query: 53 DAFLWNTMIRGFGNTNQPEKAVLFYKRMQQG--EPHVVPDTFTFSFLLKIVGGLGSVVLG 110
D +N +I GF + KA + M+ EP VV L KI + +L
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDC 166
++ ++L V + +SLI +G + I+ A+ + EE++ K +L WNS++D
Sbjct: 646 EEAKSKRIELNV----VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 167 LVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL--AFGRWVHSCIQRATYL 224
LV + NEAL F M + P+ T+ + ++ + AF W +Q+
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE--MQKQGMK 759
Query: 225 GEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNVIS----WNTMILGLASHGNGTEALT 280
S + +++ AK G + EA +F K + +N MI GL++ +A +
Sbjct: 760 PSTISYT-TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 281 LFAE 284
LF E
Sbjct: 819 LFEE 822
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 124/307 (40%), Gaps = 48/307 (15%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
PD L NT + +PEK ++ ++ VPD ++S L + GL
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA--RRFVPDARSYSIL---IHGL------- 562
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCG 171
+K G N + E + + E+ D A+N +ID CG
Sbjct: 563 ------IKAGFANETY---------------ELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGAL--AFGRWVHSCIQRATYLGEITS 229
K N+A M G P T+ + + L A+ + + +R I S
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEM 285
SL+D + K G ++EAY I + K N+ +WN+++ L EAL F M
Sbjct: 662 ---SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 286 LQENVVRPDGITFLGVLC--ACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGR 343
+E P+ +T+ G+L C F ++ ++ M + ++P+ Y M+ L +
Sbjct: 719 -KELKCTPNQVTY-GILINGLCKVRKF-NKAFVFWQEMQKQ-GMKPSTISYTTMISGLAK 774
Query: 344 AGLVEEA 350
AG + EA
Sbjct: 775 AGNIAEA 781
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 175/450 (38%), Gaps = 114/450 (25%)
Query: 37 GDMNYAVSVFDRV----DKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTF 92
G ++ A+ + DR+ KP N ++ G + AVL RM E P+
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV--ETGFQPNEV 213
Query: 93 TFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKD--IETAHQLFE 150
T+ +LK++ G L +L + ++ A V+ S+I + G+ KD ++ A LF
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDA-VKYSII-IDGLCKDGSLDNAFNLFN 271
Query: 151 EM---------------------------------------LNKDLVAWNSIIDCLVCCG 171
EM + D+VA++++IDC V G
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYL------- 224
K EA + M+Q G+ PD T+ +L G + + +A ++
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYT----------SLIDGFCKENQLDKANHMLDLMVSK 381
Query: 225 --GEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGKNV----ISWNTMILGLASHGNGTEA 278
G N L++ Y K +++ E+FR M + V +++NT+I G G A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 279 LTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRD--------YN---- 326
LF EM+ VRPD +++ +L G ++ F+ + + YN
Sbjct: 442 KELFQEMVSRR-VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 327 ----------------------VQPTVKHYGCMVDLLGRAGLVEEAYILIKNM------P 358
V+P VK Y M+ L + G + EA +L + M P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 359 MECN-AIVWRSLLAACRTHGNVKLAEKVRK 387
C I+ R+ L + KL E++++
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 159/385 (41%), Gaps = 43/385 (11%)
Query: 69 QPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL-GVENHAH 127
+ + AV ++ M + P P FS L +V L L C ++L G+ ++ +
Sbjct: 52 KEDDAVDLFQEMTRSRPR--PRLIDFSRLFSVVARTKQYDLVLDL-CKQMELKGIAHNLY 108
Query: 128 VRNSLIHMYGVMKDIETAHQLFEEMLN----KDLVAWNSIIDCLVCCGKYNEALDFFTRM 183
+ +I+ + + A +++ D V ++++I+ L G+ +EAL+ RM
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 184 VQSGMRPDDATFVVTLSACGAMG-----ALAFGRWVHSCIQ--RATYLGEITSVSNSLVD 236
V+ G +P T ++ G L R V + Q TY ++
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY--------GPVLK 220
Query: 237 MYAKCGAVEEAYEIFRSMKGKNV----ISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
+ K G A E+ R M+ + + + ++ +I GL G+ A LF EM + +
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFK 279
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYF-DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAY 351
D I + ++ + G D+G + D++ R + P V + ++D + G + EA
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR--KITPDVVAFSALIDCFVKEGKLREAE 337
Query: 352 ILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLEL---EPC--HSSDYVLL 403
L K M + + + + SL+ + A H+L+L + C + + +L
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN----HMLDLMVSKGCGPNIRTFNIL 393
Query: 404 ANMYASTGQWNEMSKERRSMQERGV 428
N Y ++ + R M RGV
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGV 418
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 181/452 (40%), Gaps = 68/452 (15%)
Query: 38 DMNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 93
D + A+S+F R+ + PD +N+MI +G +A L K M E V+P+T +
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM--NEAGVLPNTVS 297
Query: 94 FSFLLKIV-----------------------------------GGLGSVVLGKQLHCSTL 118
+S LL + G L V +L S
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Query: 119 KLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDL----VAWNSIIDCLVCCGKYN 174
K+ +E + N+++ +YG + A LF M KD+ V +N++I ++
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 175 EALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLG-EITSV-SN 232
+A + M G+ P+ T+ +S G G L + Q+ G EI V
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA---ATLFQKLRSSGVEIDQVLYQ 474
Query: 233 SLVDMYAKCGAVEEAYEIFRSMKGKNVISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
+++ Y + G + A + +K + I T I LA G EA +F + + V+
Sbjct: 475 TMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVK 534
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYFDIMS-----RDYNVQPTVKHYGCMVDLLGRAGLV 347
I+ G + +RY +++ R P +++ G+
Sbjct: 535 --DISVFGCMI-----NLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 587
Query: 348 EEAYILIKNMPMECNAI---VWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD--YVL 402
E+A + + M E V +L+ + + ++ E + + L E +P +S +++
Sbjct: 588 EKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRL-ESDPNVNSKELHLV 646
Query: 403 LANMYASTGQWNEMSKERRSMQERGVKKPEPG 434
+A +Y + N+ S+ M+ERG+ KP PG
Sbjct: 647 VAALYERADKLNDASRVMNRMRERGILKPFPG 678
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 17/339 (5%)
Query: 36 AGDMNYAVSVFD----RVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDT 91
A + A +FD R PD + ++T+I FG + A+ + ++M+Q V D
Sbjct: 168 AKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD--RVSGDL 225
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE 151
+S L+++ L + + G+ NS+I++YG K A L +E
Sbjct: 226 VLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKE 285
Query: 152 M----LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
M + + V++++++ V K+ EAL F M + D T + + G +
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 345
Query: 208 LAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWN 263
+ + +++ + S N+++ +Y + EA +FR M+ K NV+++N
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSY-NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 404
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
TMI +A L EM Q + P+ IT+ ++ G +D F + R
Sbjct: 405 TMIKIYGKTMEHEKATNLVQEM-QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL-R 462
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPMECN 362
V+ Y M+ R GL+ A L+ + + N
Sbjct: 463 SSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN 501
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 147/353 (41%), Gaps = 47/353 (13%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
P F +N ++R Q + A + M+Q + PD +T+S L+ G
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA--LAPDRYTYSTLITSFG--------- 201
Query: 112 QLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDCLVCCG 171
K G+ + A + ++ ++ ++ DLV ++++I+
Sbjct: 202 -------KEGMFDSA---------------LSWLQKMEQDRVSGDLVLYSNLIELSRRLC 239
Query: 172 KYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVS 231
Y++A+ F+R+ +SG+ PD + ++ G R + + A L S S
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 232 NSLVDMYAKCGAVEEAYEIFRSMKGKN----VISWNTMILGLASHGNGTEALTLFAEMLQ 287
+L+ +Y + EA +F MK N + + N MI EA LF L+
Sbjct: 300 -TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS-LR 357
Query: 288 ENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLV 347
+ + P+ +++ +L E F +M R +++ V Y M+ + G+
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK-DIEQNVVTYNTMIKIYGKTMEH 416
Query: 348 EEAYILIKNMP---MECNAIVWRSLLAACRTHGNVKLA----EKVRKHLLELE 393
E+A L++ M +E NAI + ++++ G + A +K+R +E++
Sbjct: 417 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEID 469
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 178/454 (39%), Gaps = 92/454 (20%)
Query: 36 AGDMNYAVSVFDRVD----KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDT 91
A ++ A VF+++ KPD + T++ F + + F+ M++ + HV PD
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK-DGHV-PDV 363
Query: 92 FTFSFLLKIV---GGLGSV-----VLGKQ-----------LHCSTLK------------- 119
TF+ L+ + G G V+ Q L C L+
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 120 ---LGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGK 172
LGV+ A+ I YG D +A + FE+M K ++VA N+ + L G+
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 173 YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSN 232
EA F + G+ PD T+ + + +G + + S + ++ V N
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV-N 542
Query: 233 SLVDMYAKCGAVEEAYEIFRSMK----GKNVISWNTMILGLASHGNGTEALTLFAEMLQE 288
SL++ K V+EA+++F MK V+++NT++ GL +G EA+ LF M+Q+
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 289 NVVRPDGITFLGVL-CACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMV--------- 338
P+ ITF + C C + + F +M D P V Y ++
Sbjct: 603 GC-PPNTITFNTLFDCLCKNDEVTLALKMLFKMM--DMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 339 ----------------DLLG---------RAGLVEEAYILIKNMPMECNA----IVWRSL 369
D + +A L+E+AY +I N C + W L
Sbjct: 660 KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 370 LAACRTHGNVKLAEKVRKHLLELEPCHSSDYVLL 403
+ + + A + L+ C D +L+
Sbjct: 720 IGSILAEAGIDNAVSFSERLVANGICRDGDSILV 753
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 160/372 (43%), Gaps = 20/372 (5%)
Query: 36 AGDMNYAVSVFDRVDK----PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDT 91
AG +N A + R+D PD + +I + + A +++M+ G PD
Sbjct: 271 AGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK--PDR 328
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLG----VENHAHVRNSLIHMYGVMKDIETAHQ 147
T+ LL + KQ K G V + ++L + +T
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 148 LFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGA 207
+ ++ + +L +N++I L+ + ++AL+ F M G++P T++V + G G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 208 LAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKG----KNVISWN 263
++ I + + SL + AK G EA +IF +K + +++N
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSL-AKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 264 TMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSR 323
M+ + G EA+ L +EM+ EN PD I ++ VDE + F M +
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMM-ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-K 565
Query: 324 DYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMPME-C--NAIVWRSLLAACRTHGNVK 380
+ ++PTV Y ++ LG+ G ++EA L + M + C N I + +L + V
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 381 LAEKVRKHLLEL 392
LA K+ ++++
Sbjct: 626 LALKMLFKMMDM 637
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 146/324 (45%), Gaps = 24/324 (7%)
Query: 52 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGK 111
PD F +NT+I G Q ++A+ F+ +M++ V PD T LL V +
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK---LVYPDFVTLCTLLPGVVKASLIEDAY 697
Query: 112 QLHCSTLKLGVENHAHVR-----NSLIHMYGVMKDIETAHQLFEEMLNKDLVAWNSIIDC 166
++ + L + A++ S++ G+ + + +L + +D +SI+
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD---GDSILVP 754
Query: 167 LV--CCGKYNE---ALDFFTRMVQS-GMRPDDATFVVTLSACGAMGALAFGRWVHSCIQR 220
++ C K+N A F + + G++P T+ + + + + V ++
Sbjct: 755 IIRYSC-KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 221 ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMKG----KNVISWNTMILGLASHGNGT 276
+ ++ + N L+D Y K G ++E +E+++ M N I+ N +I GL GN
Sbjct: 814 TGCIPDVATY-NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 277 EALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGC 336
+AL L+ +++ + P T+ ++ S G + E ++ F+ M DY +P Y
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM-LDYGCRPNCAIYNI 931
Query: 337 MVDLLGRAGLVEEAYILIKNMPME 360
+++ G+AG + A L K M E
Sbjct: 932 LINGFGKAGEADAACALFKRMVKE 955
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 131/323 (40%), Gaps = 27/323 (8%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSV--- 107
+P +N +I G + E A + +Q +PD T++FLL G G +
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVF--LQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 108 -VLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM-LNKDLVAWNSIID 165
L K++ + H V + L+ V ++ + L + + + +ID
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 166 CLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAMG-----ALAFGRWVHSCIQR 220
L G+ EA F M+ G RP+ A + + ++ G G F R V ++
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 221 --ATYLGEITSVSNSLVDMYAKCGAVEEAYEIFRSMK----GKNVISWNTMILGLASHGN 274
TY + LVD G V+E F+ +K +V+ +N +I GL
Sbjct: 960 DLKTY--------SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 275 GTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHY 334
EAL LF EM + PD T+ ++ G V+E + ++ + R ++P V +
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR-AGLEPNVFTF 1070
Query: 335 GCMVDLLGRAGLVEEAYILIKNM 357
++ +G E AY + + M
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTM 1093
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 11/238 (4%)
Query: 58 NTMIRGFGNTNQPEKAV-LFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCS 116
N +I G + A+ L+Y M + P T+ L+ + G + KQL
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRD--FSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 117 TLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGK 172
L G + + N LI+ +G + + A LF+ M+ + DL ++ ++DCL G+
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 173 YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSN 232
+E L +F + +SG+ PD + + ++ G L + + ++ + + N
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 233 SLVDMYAKCGAVEEAYEIFRSMK----GKNVISWNTMILGLASHGNGTEALTLFAEML 286
SL+ G VEEA +I+ ++ NV ++N +I G + G A ++ M+
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 133/327 (40%), Gaps = 31/327 (9%)
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEA 176
G +SL+ G +DI++ L +EM L ++ + I L GK NEA
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQ-------RATYLGEITS 229
+ RM G PD T+ V + A L + V ++ R TY+
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI----- 332
Query: 230 VSNSLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEM 285
+L+D ++ ++ + + M+ +V+++ ++ L GN EA ++
Sbjct: 333 ---TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL-DV 388
Query: 286 LQENVVRPDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAG 345
+++ + P+ T+ ++C +D+ F M V+PT Y +D G++G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSG 447
Query: 346 ---LVEEAYILIKNMPMECNAIVWRSLLAACRTHGNVKLAEKVRKHLLE--LEPCHSSDY 400
E + +K + N + + L + G + A+++ L + L P S Y
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP-DSVTY 506
Query: 401 VLLANMYASTGQWNEMSKERRSMQERG 427
++ Y+ G+ +E K M E G
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENG 533
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 145/332 (43%), Gaps = 17/332 (5%)
Query: 30 CAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVP 89
C+V V +++ S+ + KPD + RG + + + ++K + G ++V
Sbjct: 59 CSV-VSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVA-GNLNLVH 116
Query: 90 DTFTFSFLL---KIVGGLGSVV-LGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETA 145
T T +++L ++ G L + + + +K + + SL G+ +
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 146 HQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAM 205
++ E + ++N +I L+ EA++ + RM+ G RP T+ + G
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 206 GALAFGRWVHSCIQRATYLGEITSVSNSL--VDMYAKCGAVEEAYEIFRSMK----GKNV 259
+ V ++ LG +V + + + G + EAYEI + M G +V
Sbjct: 237 RDI---DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 260 ISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYFD 319
+++ +I L + A +F E ++ +PD +T++ +L S +D ++++
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVF-EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 320 IMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAY 351
M +D +V P V + +VD L +AG EA+
Sbjct: 353 EMEKDGHV-PDVVTFTILVDALCKAGNFGEAF 383
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 165/387 (42%), Gaps = 55/387 (14%)
Query: 90 DTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMY----GVMKDIETA 145
D ++++ ++ + V+ + +K G E +SLI+ + V I+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 146 HQLFEEMLNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATFVVTLSACGAM 205
++ E D+V +N+IID G N+A++ F RM + G+R D T+ ++
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA----- 217
Query: 206 GALAFGRWVHSC-IQRATYLGEITS---VSNSLVDMYAKCGAVEEAYEIFRSMKGK---- 257
G GRW + + R + +I +++D++ K G EA +++ M +
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 258 NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRY 317
+V ++N++I GL HG EA + M+ + + PD +T+ ++ VDEG +
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL-PDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 318 FDIMSR--------DYNV-----------------------QPTVKHYGCMVDLLGRAGL 346
F M++ YN +P ++ Y ++ L
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWR 396
Query: 347 VEEAYILIKNM---PMECNAIVWRSLLAACRTHGNVKLAEKVRKHL--LELEPCHSSDYV 401
VE+A +L +NM +E + + ++ GNV+ A + + L L+P S Y
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS-YT 455
Query: 402 LLANMYASTGQWNEMSKERRSMQERGV 428
+ + + QW++ R MQE G+
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 140 KDIETAHQLFEEM----LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATF 195
K+ + LF M + DL ++N +I+CL C ++ AL +M++ G PD
Sbjct: 83 KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD---- 138
Query: 196 VVTLSACGAMGALAFGRWVHSCIQRATYLGEI-----TSVSNSLVDMYAKCGAVEEAYEI 250
VVT+S+ + G V I + + E+ + N+++D K G V +A E+
Sbjct: 139 VVTVSS--LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 251 FRSMKGKNV----ISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACS 306
F M+ V +++N+++ GL G ++A L +M+ ++V P+ ITF V+
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV-PNVITFTAVIDVFV 255
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEA 350
G E + ++ M+R V P V Y +++ L G V+EA
Sbjct: 256 KEGKFSEAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEA 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 154/361 (42%), Gaps = 52/361 (14%)
Query: 6 EIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK----PDAFLWNTMI 61
++ +++ + GF + ++ II S G +N AV +FDR+++ DA +N+++
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTII---DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 62 RGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLG 121
G + + A + M + +VP+ TF+ ++ + G +L+ +
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRD--IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 122 VENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGKYNEAL 177
V+ NSLI+ + ++ A Q+ + M+ K D+V +N++I+ + +E
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 178 DFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDM 237
F M Q G+ D T+ N+++
Sbjct: 335 KLFREMAQRGLVGDTITY------------------------------------NTIIQG 358
Query: 238 YAKCGAVEEAYEIFRSMKGK-NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGI 296
Y + G + A EIF M + N+ +++ ++ GL + +AL LF E +Q++ + D
Sbjct: 359 YFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF-ENMQKSEIELDIT 417
Query: 297 TFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKN 356
T+ V+ G V++ F +S ++P V Y M+ R +++ +L +
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCK-GLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Query: 357 M 357
M
Sbjct: 477 M 477
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 165/403 (40%), Gaps = 69/403 (17%)
Query: 51 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLG 110
+PD + T+I G N+ +AV RM Q P+ T+ ++ + G + L
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNGLCKRGDIDLA 169
Query: 111 KQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEEM------------------ 152
L +E + N++I + ++ A LF+EM
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 153 ---------------------LNKDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPD 191
+N +LV +N++ID V GK+ EA M++ + PD
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 192 DATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEIT---------SVSNSLVDMYAKCG 242
T+ +L G +H + +A + E N+L+ + K
Sbjct: 290 IFTY----------NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 243 AVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITF 298
VE+ E+FR M + + +++ T+I GL G+ A +F +M+ + V PD +T+
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTY 398
Query: 299 LGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP 358
+L + G +++ FD M + ++ + Y M++ + +AG V++ + L ++
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 359 M---ECNAIVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSS 398
+ + N + + ++++ + ++ A + K + E P S
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 162/366 (44%), Gaps = 27/366 (7%)
Query: 80 MQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVM 139
M + P +P F F+ LL + + L L +LG+ ++ + N LI+ +
Sbjct: 1 MVKSRP--LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRR 58
Query: 140 KDIETAHQLFEEMLN----KDLVAWNSIIDCLVCCGKYNEALDFFTRMVQSGMRPDDATF 195
I A L +M+ +V +S+++ + ++A+ +MV+ G RPD TF
Sbjct: 59 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 196 VVTLSAC----GAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVEEAYEIF 251
+ A A+A V +QR +T +V+ K G ++ A+ +
Sbjct: 119 TTLIHGLFLHNKASEAVAL---VDRMVQRGCQPNLVT--YGVVVNGLCKRGDIDLAFNLL 173
Query: 252 RSMKG----KNVISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVL-CACS 306
M+ +V+ +NT+I L + + +AL LF EM + +RP+ +T+ ++ C CS
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCS 232
Query: 307 HGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNA 363
+G + D + D++ + N P + + ++D + G EA L +M ++ +
Sbjct: 233 YGRWSDASQLLSDMIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 364 IVWRSLLAACRTHGNVKLAEKVRKHLLELEPCHSSD-YVLLANMYASTGQWNEMSKERRS 422
+ SL+ H + A+++ + ++ + D Y L + + + + ++ R
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 423 MQERGV 428
M RG+
Sbjct: 351 MSHRGL 356
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 147/370 (39%), Gaps = 87/370 (23%)
Query: 10 RIYQTGFHQNHLVVGKIIV-FCAVSVPAGDMNYAVSVFDRVD----KPDAFLWNTMIRGF 64
R+ Q G N + G ++ C GD++ A ++ ++++ + D ++NT+I
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCK----RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 65 GNTNQPEKAVLFYKRMQQG--EPHVV-------------------------------PDT 91
+ A+ +K M+ P+VV P+
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 92 FTFSFLLKIVGGLGSVVLGKQLHCSTLKLGVENHAHVRNSLIHMYGVMKDIETAHQLFEE 151
TF+ L+ G V ++LH +K ++ NSLI+ + + ++ A Q+FE
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 152 MLNKD---------------------------------------LVAWNSIIDCLVCCGK 172
M++KD V + ++I L G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 173 YNEALDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSN 232
+ A F +MV G+ PD T+ + L G L V +Q++ +I +
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY-IYT 434
Query: 233 SLVDMYAKCGAVEEAYEIFRSMKGK----NVISWNTMILGLASHGNGTEALTLFAEMLQE 288
++++ K G V++ +++F S+ K NV+++NTMI GL S EA L +M +E
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM-KE 493
Query: 289 NVVRPDGITF 298
+ PD T+
Sbjct: 494 DGPLPDSGTY 503
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 182/452 (40%), Gaps = 66/452 (14%)
Query: 5 KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK----PDAFLWNTM 60
KE+ A + ++G + +++ + GD+ VF + PD +++M
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLM---EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 61 IRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLGSVVLGKQLHCSTLKL 120
+ F + +KA++++ ++ E ++PD ++ L++ G + + L L+
Sbjct: 382 MSLFTRSGNLDKALMYFNSVK--EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 121 GVENHAHVRNSLIHMYGVMKDIETAHQLFEEMLNK----DLVAWNSIIDCLVCCGKYNEA 176
G N+++H K + A +LF EM + D +ID G A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 177 LDFFTRMVQSGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVD 236
++ F +M + +R D T+ N+L+D
Sbjct: 500 MELFQKMKEKRIRLDVVTY------------------------------------NTLLD 523
Query: 237 MYAKCGAVEEAYEIFRSMKGKNV----ISWNTMILGLASHGNGTEALTLFAEMLQENVVR 292
+ K G ++ A EI+ M K + IS++ ++ L S G+ EA ++ EM+ +N ++
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN-IK 582
Query: 293 PDGITFLGVLCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYI 352
P + ++ G +G + + M + V P Y ++ R + +A+
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV-PDCISYNTLIYGFVREENMSKAFG 641
Query: 353 LIKNMPMECNAIV-----WRSLLAACRTHGNVKLAEKVRKHLLE--LEPCHSSDYVLLAN 405
L+K M E +V + S+L +K AE V + ++E + P S+ Y + N
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST-YTCMIN 700
Query: 406 MYASTGQWNEMSKERRSMQERGVKKPEPGNSF 437
+ S E + M +RG P + F
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGF---SPDDKF 729
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 135/307 (43%), Gaps = 24/307 (7%)
Query: 130 NSLIHMYGVMKDIETAHQLFEEMLNKD----LVAWNSIIDCLVCCGKYNEALDFFTRMVQ 185
N+LI Y +E A +L M K + +N++I+ L GKY A + F M++
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 186 SGMRPDDATFVVTLSACGAMGALAFGRWVHSCIQRATYLGEITSVSNSLVDMYAKCGAVE 245
SG+ PD T+ L G + V S ++ + ++ S S++ ++ + G ++
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS-SMMSLFTRSGNLD 392
Query: 246 EAYEIFRSMKGKNVISWNT----MILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGV 301
+A F S+K +I N +I G G + A+ L EMLQ+ D +T+ +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM-DVVTYNTI 451
Query: 302 LCACSHGGFVDEGRRYFDIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNMP--- 358
L + E + F+ M+ + + P ++D + G ++ A L + M
Sbjct: 452 LHGLCKRKMLGEADKLFNEMT-ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 359 MECNAIVWRSLLAACRTHGNVKLAEKVRKHLL--ELEPCHSSDYVLLANMYASTGQ---- 412
+ + + + +LL G++ A+++ ++ E+ P S Y +L N S G
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS-YSILVNALCSKGHLAEA 569
Query: 413 ---WNEM 416
W+EM
Sbjct: 570 FRVWDEM 576
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 45/310 (14%)
Query: 115 CSTLKLGVENHAHVRNSLIHM---------YGVMKDIETAHQLFEEM------LNKDLVA 159
C +LK G N VRN LI + Y D+ + +++ ++
Sbjct: 59 CFSLKQGNNN---VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLS 115
Query: 160 WNSIIDCLVCCGKYNEALDFFTRMVQ-SGMRPDDA--TFVVTLSACGAMGALAFGRWVHS 216
+++I LV G+ ++A RM++ SG+ + + T S CG+ ++ F + +
Sbjct: 116 LSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV-FDLLIRT 174
Query: 217 CIQ--------------RATYLGEITSVSNSLVDMYAKCGAVEEAY----EIFRSMKGKN 258
+Q R+ N+L+ + G VE A+ EI RS G N
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 259 VISWNTMILGLASHGNGTEALTLFAEMLQENVVRPDGITFLGVLCACSHGGFVDEGRRYF 318
V + N M+ L G E + F +QE V PD +T+ ++ A S G ++E
Sbjct: 235 VYTLNIMVNALCKDGK-MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 319 DIMSRDYNVQPTVKHYGCMVDLLGRAGLVEEAYILIKNM---PMECNAIVWRSLLAACRT 375
+ M P V Y +++ L + G E A + M + ++ +RSLL
Sbjct: 294 NAMP-GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 376 HGNVKLAEKV 385
G+V EKV
Sbjct: 353 KGDVVETEKV 362