Miyakogusa Predicted Gene

Lj3g3v3639870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3639870.1 tr|Q4U3Z5|Q4U3Z5_LOTJA Gamma-tocopherol
methyltransferase OS=Lotus japonicus GN=gamma-TMT PE=2
SV=1,100,0,TOCOPHEROL O-METHYLTRANSFERASE,NULL;
METHYLTRANSFERASE,NULL; SAM_MT95,Tocopherol
O-methyltransferase,CUFF.46123.1
         (300 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G64970.1 | Symbols: G-TMT, TMT1, VTE4 | gamma-tocopherol meth...   455   e-128
AT3G18000.1 | Symbols: NMT1, XPL1, PEAMT | S-adenosyl-L-methioni...    83   2e-16
AT1G73600.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    82   3e-16
AT1G73600.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    82   4e-16
AT1G48600.2 | Symbols: PMEAMT, AtPMEAMT | S-adenosyl-L-methionin...    82   6e-16
AT1G48600.1 | Symbols: PMEAMT, AtPMEAMT | S-adenosyl-L-methionin...    82   6e-16
AT5G13710.2 | Symbols: SMT1, CPH | sterol methyltransferase 1 | ...    80   2e-15
AT5G13710.1 | Symbols: SMT1, CPH | sterol methyltransferase 1 | ...    80   2e-15
AT1G20330.1 | Symbols: SMT2, CVP1, FRL1 | sterol methyltransfera...    79   3e-15
AT1G76090.1 | Symbols: SMT3 | sterol methyltransferase 3 | chr1:...    74   1e-13

>AT1G64970.1 | Symbols: G-TMT, TMT1, VTE4 | gamma-tocopherol
           methyltransferase | chr1:24134337-24135993 REVERSE
           LENGTH=348
          Length = 348

 Score =  455 bits (1171), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 216/288 (75%), Positives = 247/288 (85%), Gaps = 3/288 (1%)

Query: 10  LQTGIAEFYDESSGLWEDMWGDHMHHGFYEQDVTVSVSD--HRVAQIRMIEESLRFAALS 67
           L+ GIAEFY+E+SGLWE++WGDHMHHGFY+ D +V +SD  H+ AQIRMIEESLRFA ++
Sbjct: 60  LRKGIAEFYNETSGLWEEIWGDHMHHGFYDPDSSVQLSDSGHKEAQIRMIEESLRFAGVT 119

Query: 68  EDPAKKPES-IVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLADKVS 126
           ++  +K    +VDVGCGIGGSSRYLA KF A+ +GITLSPVQA+RAN LAA+Q LA K S
Sbjct: 120 DEEEEKKIKKVVDVGCGIGGSSRYLASKFGAECIGITLSPVQAKRANDLAAAQSLAHKAS 179

Query: 127 FQVADALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGP 186
           FQVADAL+QPF DG+FDLVWSMESGEHMPDK KFV EL RVAAPGG IIIVTWCHR+L  
Sbjct: 180 FQVADALDQPFEDGKFDLVWSMESGEHMPDKAKFVKELVRVAAPGGRIIIVTWCHRNLSA 239

Query: 187 AEESLQPWEQNLLKRICDAFYLPAWCSTADYVKLLESHSLQDIKSADWSPFVAPFWPAVI 246
            EE+LQPWEQN+L +IC  FYLPAWCST DYV LL+SHSLQDIK ADWS  VAPFWPAVI
Sbjct: 240 GEEALQPWEQNILDKICKTFYLPAWCSTDDYVNLLQSHSLQDIKCADWSENVAPFWPAVI 299

Query: 247 RSAFTWKGLTSLLRSGMKTIKGALAMPLMIEGFKKGVIKFAIVTCRKP 294
           R+A TWKGL SLLRSGMK+IKGAL MPLMIEG+KKGVIKF I+TC+KP
Sbjct: 300 RTALTWKGLVSLLRSGMKSIKGALTMPLMIEGYKKGVIKFGIITCQKP 347


>AT3G18000.1 | Symbols: NMT1, XPL1, PEAMT |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr3:6154578-6157331 FORWARD
           LENGTH=491
          Length = 491

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 2/118 (1%)

Query: 72  KKPESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLADKVSFQVAD 131
           K  + ++DVGCGIGG   Y+A+KF    VGI LS      + AL  + GL+  V F+VAD
Sbjct: 281 KPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMI--SFALERAIGLSCSVEFEVAD 338

Query: 132 ALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGPAEE 189
              + +PD  FD+++S ++  H+ DKP       +   PGG ++I  +C     P+ E
Sbjct: 339 CTTKHYPDNSFDVIYSRDTILHIQDKPALFRTFFKWLKPGGKVLISDYCRSPKTPSAE 396


>AT1G73600.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:27669224-27673400 FORWARD LENGTH=504
          Length = 504

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 2/116 (1%)

Query: 72  KKPESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLADKVSFQVAD 131
           K  + ++DVGCGIGG   Y+A+ F    VGI LS      + AL  + GL   V F+VAD
Sbjct: 294 KPGQKVLDVGCGIGGGDFYMAENFDVDVVGIDLSVNMI--SFALEHAIGLKCSVEFEVAD 351

Query: 132 ALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGPA 187
             ++ +PD  FD+++S ++  H+ DKP       +   PGG ++I  +C     P+
Sbjct: 352 CTKKEYPDNTFDVIYSRDTILHIQDKPALFRRFYKWLKPGGKVLITDYCRSPKTPS 407


>AT1G73600.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:27670825-27673400 FORWARD LENGTH=490
          Length = 490

 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 2/116 (1%)

Query: 72  KKPESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLADKVSFQVAD 131
           K  + ++DVGCGIGG   Y+A+ F    VGI LS      + AL  + GL   V F+VAD
Sbjct: 280 KPGQKVLDVGCGIGGGDFYMAENFDVDVVGIDLSVNMI--SFALEHAIGLKCSVEFEVAD 337

Query: 132 ALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGPA 187
             ++ +PD  FD+++S ++  H+ DKP       +   PGG ++I  +C     P+
Sbjct: 338 CTKKEYPDNTFDVIYSRDTILHIQDKPALFRRFYKWLKPGGKVLITDYCRSPKTPS 393


>AT1G48600.2 | Symbols: PMEAMT, AtPMEAMT |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr1:17966074-17969077 FORWARD
           LENGTH=491
          Length = 491

 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 2/118 (1%)

Query: 72  KKPESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLADKVSFQVAD 131
           K  + ++DVGCGIGG   Y+A+ F    VGI LS      + AL  + GL   V F+VAD
Sbjct: 281 KPGQKVLDVGCGIGGGDFYMAENFDVHVVGIDLSVNMI--SFALERAIGLKCSVEFEVAD 338

Query: 132 ALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGPAEE 189
              + +PD  FD+++S ++  H+ DKP       +   PGG ++I  +C     P+ E
Sbjct: 339 CTTKTYPDNSFDVIYSRDTILHIQDKPALFRTFFKWLKPGGKVLITDYCRSAETPSPE 396


>AT1G48600.1 | Symbols: PMEAMT, AtPMEAMT |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr1:17966448-17969077 FORWARD
           LENGTH=475
          Length = 475

 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 2/118 (1%)

Query: 72  KKPESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLADKVSFQVAD 131
           K  + ++DVGCGIGG   Y+A+ F    VGI LS      + AL  + GL   V F+VAD
Sbjct: 265 KPGQKVLDVGCGIGGGDFYMAENFDVHVVGIDLSVNMI--SFALERAIGLKCSVEFEVAD 322

Query: 132 ALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGPAEE 189
              + +PD  FD+++S ++  H+ DKP       +   PGG ++I  +C     P+ E
Sbjct: 323 CTTKTYPDNSFDVIYSRDTILHIQDKPALFRTFFKWLKPGGKVLITDYCRSAETPSPE 380


>AT5G13710.2 | Symbols: SMT1, CPH | sterol methyltransferase 1 |
           chr5:4424048-4426866 REVERSE LENGTH=336
          Length = 336

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 5   EEKKLLQTG-IAEFYDESSGLWEDMWGDHMHHGFYEQDVTVSVSDHRVAQIRMIEESLRF 63
           EE+K   T  + ++YD ++  +E  WG+  H     +  ++  S  R      ++     
Sbjct: 35  EERKANYTDMVNKYYDLATSFYEYGWGESFHFAQRWKGESLRESIKRHEHFLALQ----- 89

Query: 64  AALSEDPAKKPESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLAD 123
             L   P +K   ++DVGCGIGG  R +A+   +   G+  +  Q  R   L    G+  
Sbjct: 90  --LGIQPGQK---VLDVGCGIGGPLREIARFSNSVVTGLNNNEYQITRGKELNRLAGVDK 144

Query: 124 KVSFQVADALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRD 183
             +F  AD ++ PFP+  FD V+++E+  H PD      E+ RV  PG       WC  D
Sbjct: 145 TCNFVKADFMKMPFPENSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCMTD 204


>AT5G13710.1 | Symbols: SMT1, CPH | sterol methyltransferase 1 |
           chr5:4424048-4426866 REVERSE LENGTH=336
          Length = 336

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 5   EEKKLLQTG-IAEFYDESSGLWEDMWGDHMHHGFYEQDVTVSVSDHRVAQIRMIEESLRF 63
           EE+K   T  + ++YD ++  +E  WG+  H     +  ++  S  R      ++     
Sbjct: 35  EERKANYTDMVNKYYDLATSFYEYGWGESFHFAQRWKGESLRESIKRHEHFLALQ----- 89

Query: 64  AALSEDPAKKPESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLAD 123
             L   P +K   ++DVGCGIGG  R +A+   +   G+  +  Q  R   L    G+  
Sbjct: 90  --LGIQPGQK---VLDVGCGIGGPLREIARFSNSVVTGLNNNEYQITRGKELNRLAGVDK 144

Query: 124 KVSFQVADALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRD 183
             +F  AD ++ PFP+  FD V+++E+  H PD      E+ RV  PG       WC  D
Sbjct: 145 TCNFVKADFMKMPFPENSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCMTD 204


>AT1G20330.1 | Symbols: SMT2, CVP1, FRL1 | sterol methyltransferase
           2 | chr1:7038968-7040053 REVERSE LENGTH=361
          Length = 361

 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 28/299 (9%)

Query: 14  IAEFYDESSGLWEDMWGDHMHHGFYEQDVTVSVSDHRVAQIRMIEESLRFAALSEDPAKK 73
           +  FY+  + ++E  WG   H        ++    H+ A    + E +    +   P +K
Sbjct: 74  VDTFYNLVTDIYEWGWGQSFHF-----SPSIPGKSHKDAT--RLHEEMAVDLIQVKPGQK 126

Query: 74  PESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLADKVSFQVADAL 133
              I+DVGCG+GG  R +A   +A  VGIT++  Q  RA       GL         + L
Sbjct: 127 ---ILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCGNFL 183

Query: 134 EQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGPAEESLQP 193
           + PF D  FD  +S+E+  H P   +   E+ RV  PG   +   W   +   AE+    
Sbjct: 184 QMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLKPGSMYVSYEWVTTEKFKAEDDEH- 242

Query: 194 WEQNLLKRICDAFYLPAWCSTADYVKLLESHSLQDIKSADW-SPFVAPFWPAVI--RSAF 250
               +++ I     LP   +  D  +  +    + +K  D  SP   P+W  +   R A+
Sbjct: 243 --VEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEKDLASPPAEPWWTRLKMGRLAY 300

Query: 251 TWKG--LTSLLRSGMKTIKGALAMPLMI--------EGFKKGVIK-FAIVTCRKPENVE 298
            W+   +  +L +     KG + +  M+         G + G+     ++ CRKPE+ E
Sbjct: 301 -WRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRGGETGIFSPMHMILCRKPESPE 358


>AT1G76090.1 | Symbols: SMT3 | sterol methyltransferase 3 |
           chr1:28550592-28551671 REVERSE LENGTH=359
          Length = 359

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 36/300 (12%)

Query: 14  IAEFYDESSGLWEDMWGDHMHH-----GFYEQDVTVSVSDHRVAQIRMIEESLRFAALSE 68
           +  FY+  + ++E  WG   H      G  ++D T             I E +    +  
Sbjct: 74  VDTFYNLVTDIYEWGWGQSFHFSPHVPGKSDKDAT------------RIHEEMAVDLIKV 121

Query: 69  DPAKKPESIVDVGCGIGGSSRYLAKKFQAKSVGITLSPVQAQRANALAASQGLADKVSFQ 128
            P +K   I+D GCG+GG  R +A   +A+  GIT++  Q QRA       GL    +  
Sbjct: 122 KPGQK---ILDAGCGVGGPMRAIAAHSKAQVTGITINEYQVQRAKLHNKKAGLDSLCNVV 178

Query: 129 VADALEQPFPDGQFDLVWSMESGEHMPDKPKFVGELARVAAPGGTIIIVTWCHRDLGPAE 188
             + L+ PF +  FD  +S+E+  H P   +   E+ RV  PG   +   W   +    +
Sbjct: 179 CGNFLKMPFDENTFDGAYSIEATCHAPKLEEVYSEIFRVMKPGSLFVSYEWVTTEKYRDD 238

Query: 189 ESLQPWEQNLLKRICDAFYLPAWCSTADYVKLLESHSLQDIKSADWS-PFVAPFWPAVI- 246
           +      +++++ I     LP   S AD     +    + +K  D + P   P+W  +  
Sbjct: 239 DEEH---KDVIQGIERGDALPGLRSYADIAVTAKKVGFEVVKEKDLAKPPSKPWWNRLKM 295

Query: 247 -RSAFTWKGLTSLLRSGMKTI-KGALAMPLMI--------EGFKKGVIK-FAIVTCRKPE 295
            R A+    +  ++ S +    KG + +  M+         G + G+     ++ CRKPE
Sbjct: 296 GRIAYWRNHVVVVILSAIGVAPKGTVDVHKMLFKTADYLTRGGETGIFSPMHMILCRKPE 355