Miyakogusa Predicted Gene

Lj3g3v3338180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3338180.1 tr|Q3C1F3|Q3C1F3_LOTJA Nonsymbiotic hemoglobin
OS=Lotus japonicus GN=LjHb2 PE=2 SV=1,99.38,0,GLOBIN,Globin;
NON-SYMBIOTIC HEMOGLOBIN (RHB),NULL; LEGHEMOGLOBIN-RELATED,NULL;
PLANTGLOBIN,Leghaemo,CUFF.45635.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16060.1 | Symbols: GLB1, AHB1, ARATH GLB1, NSHB1, ATGLB1, HB...   222   8e-59
AT3G10520.1 | Symbols: AHB2, GLB2, ARATH GLB2, NSHB2, ATGLB2, HB...   172   9e-44

>AT2G16060.1 | Symbols: GLB1, AHB1, ARATH GLB1, NSHB1, ATGLB1, HB1 |
           hemoglobin 1 | chr2:6982782-6983522 REVERSE LENGTH=160
          Length = 160

 Score =  222 bits (566), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 108/155 (69%), Positives = 125/155 (80%)

Query: 3   ENTTTIAFTEEQEALVVKSWNAMKKDSAELSFKFFSKILEIAPPAKQLFSFLRDSEVPLD 62
           E+   I FTEEQEALVVKSW+ MKK+SAEL  K F KI EIAP  K++FSFLRDS +P +
Sbjct: 2   ESEGKIVFTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAE 61

Query: 63  QNPKLKPHAMSVFLMTCESAAQLRKEGKVTVRESNLKKLGATHFKKGVIPEHFEVTKQAL 122
           QNPKLKPHAMSVF+M CESA QLRK GKVTVRE+ LK+LGA+H K GV+ EHFEV K AL
Sbjct: 62  QNPKLKPHAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYAL 121

Query: 123 LDTIKEAVPELWSLELKDAWAIAHDQLASAIIAEM 157
           L+TIKEAVPE+WS E+K AW  A+D L +AI AEM
Sbjct: 122 LETIKEAVPEMWSPEMKVAWGQAYDHLVAAIKAEM 156


>AT3G10520.1 | Symbols: AHB2, GLB2, ARATH GLB2, NSHB2, ATGLB2, HB2 |
           haemoglobin 2 | chr3:3276516-3277765 REVERSE LENGTH=158
          Length = 158

 Score =  172 bits (436), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 91/154 (59%), Positives = 113/154 (73%), Gaps = 2/154 (1%)

Query: 8   IAFTEEQEALVVKSWNAMKKDSAELSFKFFSKILEIAPPAKQLFSFLRDS-EVPLDQNPK 66
           I FTE+QEALV +SW  +K+D  + S  FFS+ILEIAP AK LFSFLRDS EVP   NPK
Sbjct: 4   IGFTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVP-HNNPK 62

Query: 67  LKPHAMSVFLMTCESAAQLRKEGKVTVRESNLKKLGATHFKKGVIPEHFEVTKQALLDTI 126
           LK HA+ VF MTCE+A QLR+EGKV V ++ L+ LG+ H K GVI  HFEV K+ALL T+
Sbjct: 63  LKAHAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTL 122

Query: 127 KEAVPELWSLELKDAWAIAHDQLASAIIAEMKPE 160
           KE + E ++ E++ AW+ A+D LA AI  EMK E
Sbjct: 123 KEGLGEKYNEEVEGAWSQAYDHLALAIKTEMKQE 156