Miyakogusa Predicted Gene

Lj3g3v3085560.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3085560.2 Non Chatacterized Hit- tr|D7SKY8|D7SKY8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,80.3,0,YEAST73DUF,Vacuolar fusion protein MON1; Mon1,Vacuolar
fusion protein MON1; seg,NULL; SUBFAMILY NOT ,CUFF.45255.2
         (321 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28390.1 | Symbols:  | SAND family protein | chr2:12139836-12...   355   2e-98

>AT2G28390.1 | Symbols:  | SAND family protein |
           chr2:12139836-12143375 REVERSE LENGTH=607
          Length = 607

 Score =  355 bits (912), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 162/207 (78%), Positives = 183/207 (88%)

Query: 93  QIDNISISDSHTSWIPGKRNLDEDDASLSWRKRKKHFFILSHSGKPIYSRYGDEHKLAGF 152
            +D  + S    +W+PGKR++DEDDAS SWRKRKKHFFILS+SGKPIYSRYGDEHKLAGF
Sbjct: 147 NVDGDTASQHEAAWLPGKRHVDEDDASTSWRKRKKHFFILSNSGKPIYSRYGDEHKLAGF 206

Query: 153 SATLQAIISFVENGGDSVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLLGQLELIYG 212
           SATLQAIISFVENGGD V LV+AG HQVVFLVKGPIYLVCISCT+E YE L GQL+L+YG
Sbjct: 207 SATLQAIISFVENGGDRVNLVKAGNHQVVFLVKGPIYLVCISCTDETYEYLRGQLDLLYG 266

Query: 213 QMLVILTKSVNRCFEKNPKFDMTPLLGGTDVVFSSLIHSFGWNPATFLHAYTCLPLAYAT 272
           QM++ILTKS++RCFEKN KFDMTPLLGGTD VFSSL+HSF WNPATFLHAYTCLPL YA 
Sbjct: 267 QMILILTKSIDRCFEKNAKFDMTPLLGGTDAVFSSLVHSFSWNPATFLHAYTCLPLPYAL 326

Query: 273 RQAAGAILQDIADSGVLFAILMCRNKV 299
           RQA G ILQ++  SGVLF++LMCR+KV
Sbjct: 327 RQATGTILQEVCASGVLFSLLMCRHKV 353