Miyakogusa Predicted Gene
- Lj3g3v2812190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2812190.1 CUFF.44742.1
(454 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G28450.1 | Symbols: | nucleotide binding;protein binding | c... 758 0.0
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 64 2e-10
AT5G54520.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 64 3e-10
AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 63 5e-10
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 61 1e-09
AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like superf... 59 6e-09
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 58 1e-08
AT2G22040.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 58 1e-08
AT1G62020.1 | Symbols: | Coatomer, alpha subunit | chr1:2291981... 58 2e-08
AT3G18130.1 | Symbols: RACK1C_AT | receptor for activated C kina... 57 3e-08
AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 | c... 57 4e-08
AT2G21390.1 | Symbols: | Coatomer, alpha subunit | chr2:9152428... 56 4e-08
AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein | chr... 55 7e-08
AT3G18140.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 55 1e-07
AT1G48630.1 | Symbols: RACK1B_AT | receptor for activated C kina... 54 3e-07
AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 3e-07
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 7e-07
AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protei... 52 7e-07
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 8e-07
AT3G15610.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 8e-07
AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfam... 52 9e-07
AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 52 1e-06
AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 52 1e-06
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 1e-06
AT1G18080.1 | Symbols: ATARCA, RACK1A_AT, RACK1A | Transducin/WD... 51 1e-06
AT5G49430.1 | Symbols: | WD40/YVTN repeat-like-containing domai... 51 1e-06
AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfam... 51 1e-06
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 51 2e-06
AT1G15470.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 3e-06
AT1G10580.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 6e-06
AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 49 6e-06
AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 49 6e-06
AT2G47410.2 | Symbols: | WD40/YVTN repeat-like-containing domai... 49 7e-06
AT2G47410.1 | Symbols: | WD40/YVTN repeat-like-containing domai... 49 8e-06
AT1G52730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 8e-06
AT1G52730.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 8e-06
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 8e-06
>AT4G28450.1 | Symbols: | nucleotide binding;protein binding |
chr4:14061724-14064582 REVERSE LENGTH=452
Length = 452
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/454 (77%), Positives = 398/454 (87%), Gaps = 2/454 (0%)
Query: 1 MKVKVISRSVDEFTRERSQDLQRVFHNFDPILRPQEKAVEYVRALNAVKLDKIFARPFIG 60
MK+K +SRSVDE+TRERSQDLQRVFHNFDP LRP EKAVEY RAL A KL+KIFARPF+G
Sbjct: 1 MKIKTLSRSVDEYTRERSQDLQRVFHNFDPSLRPMEKAVEYQRALTAAKLEKIFARPFVG 60
Query: 61 AMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTD 120
AMDGH D VSCMAK+P+ LK IFS SMDGDIRLWDI+SRRTV QFPGHQGAVRGLT STD
Sbjct: 61 AMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTD 120
Query: 121 GRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFAT 180
G +LVSCGTDCTVRLWNVP +L DS S++N +EP++ YV KNAFWA DHQ+EG+LFAT
Sbjct: 121 GNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFAT 180
Query: 181 AGAQIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMASP 240
AGAQ+DIWNHNRSQP+ SF WG+D+ ISVRFNPGEPNLLA TS RSI +YD+R++S
Sbjct: 181 AGAQLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLA--TSASDRSITIYDLRLSSA 238
Query: 241 VRKMMMETKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVLDIDYS 300
RK++M TKTNSI+WNPMEP+N TAANEDG+CYS+D RKLDEAKCVHKDHV V+DID+S
Sbjct: 239 ARKIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSFDGRKLDEAKCVHKDHVSAVMDIDFS 298
Query: 301 PTGREFVTGSYDRTLRLFPYNGGHSKEIYHTKRMQRVFCVKFSGDGSYVISGSDDTNLRL 360
PTGREFVTGSYDR++R+FPYNGGHS+EIYHTKRMQRVFCVK+S D +YVISGSDDTNLRL
Sbjct: 299 PTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNLRL 358
Query: 361 WKAKASEQLGVILPREQKKHDYYEAIKKRYKHLPDIKRIDRHRHLPKPVYKAAAEARIRA 420
WKAKASEQLGVILPREQKKH+Y EA+K RYKHL ++KRI RHRHLPKP+YKA R
Sbjct: 359 WKAKASEQLGVILPREQKKHEYNEAVKNRYKHLSEVKRIVRHRHLPKPIYKAMGIIRTVN 418
Query: 421 DSKRRKEQRRKAHSAPGSVTTQPLRKKRIISEVE 454
DSKRRKE RRKAHSAPG+V T PLRK++II EVE
Sbjct: 419 DSKRRKEARRKAHSAPGTVVTAPLRKRKIIKEVE 452
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 62 MDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDG 121
M GH+ V C+ P+ +I +GS D +RLWD+ + V F GH+ V L +S DG
Sbjct: 498 MAGHLSDVDCVQWHPN-CNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDG 556
Query: 122 RILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATA 181
R + S D T+ +W++ ST + P + + W+ + EG L A+
Sbjct: 557 RYMASGDEDGTIMMWDL----------STARCITPLMGH--NSCVWSLSYSGEGSLLASG 604
Query: 182 GAQ--IDIW----------------NHNRSQPINSFTWGSDTTISVRFNPGEPNLLAAS 222
A + +W N NR + + +F S ++RF+ NLL A+
Sbjct: 605 SADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRFS--RRNLLFAA 661
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 115/303 (37%), Gaps = 53/303 (17%)
Query: 45 LNAVKLDKIFARPFIGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIA------- 97
L++V + + F+ +G S ++ D S + FS D I++WD+A
Sbjct: 335 LSSVAMPSVSFYTFVNTHNGL--NCSSISHDGSLVAGGFS---DSSIKVWDMAKIGQAGS 389
Query: 98 -----------------SRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPV 140
RR+ GH G V T S G ++S D T+RLW
Sbjct: 390 GALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLW---- 445
Query: 141 DTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATAGAQ--IDIWNHNRSQPINS 198
STK W A G FA+ IW+ +R QP+
Sbjct: 446 --------STKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRI 497
Query: 199 FTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMASPVRKMM-METKTNSISWNP 257
V+++ PN +T +++ L+D++ VR + + S++ +P
Sbjct: 498 MAGHLSDVDCVQWH---PNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSP 554
Query: 258 MEPLNFTAANEDGNCYSYDARKLDEAKCVH--KDHVFPVLDIDYSPTGREFVTGSYDRTL 315
+ + +EDG +D L A+C+ H V + YS G +GS D T+
Sbjct: 555 -DGRYMASGDEDGTIMMWD---LSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTV 610
Query: 316 RLF 318
+L+
Sbjct: 611 KLW 613
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 277 ARKLDEAKCVHKDHVFPVLDIDYSPTGREFVTGSYDRTLRLFPYNGGHSKEIYHTKRMQR 336
+ KL+ +K H +PV D +SP G F + S+DRT R++ + I +
Sbjct: 446 STKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIM-AGHLSD 504
Query: 337 VFCVKFSGDGSYVISGSDDTNLRLWKAKASEQLGVIL 373
V CV++ + +Y+ +GS D +RLW + E + + +
Sbjct: 505 VDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFI 541
>AT5G54520.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:22146781-22149089 REVERSE LENGTH=457
Length = 457
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 33/277 (11%)
Query: 61 AMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIAS--RRTVYQFPGHQGAVRGLTVS 118
++ GH AV+ + S + + S +DG + +W++ S ++ V F H V+ + S
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWS 214
Query: 119 TDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELF 178
G L+SCG DCT RL++V + T++ E V V+K H +F
Sbjct: 215 KQGLSLLSCGYDCTSRLFDV------ERGVETQSFKEDEVVGVVKF------HPDNCNVF 262
Query: 179 ATAGAQ--IDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGG----SRSIIL 232
+ G++ + +W+ ++ ++ + + V F G +++S G ++I+
Sbjct: 263 LSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIV 322
Query: 233 YDIRMASPV-RKMMMETKTN-SISWNPMEPL-------NFTAANEDGNCYSYDARKLDEA 283
+DI P+ ++ +E T I +P +P+ N+TA + + K E
Sbjct: 323 WDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEG 382
Query: 284 KCVHKDHVFPVLDIDYSPTGREFVTGSYDRTLRLFPY 320
V FP+ ++SP G +GS D ++ ++ Y
Sbjct: 383 HWVAG---FPI-KCNFSPDGETLASGSSDGSVYMYDY 415
>AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:25873146-25875021 FORWARD LENGTH=299
Length = 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 25/262 (9%)
Query: 105 FPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKN 164
GH+GAV + DG ++CG D T+RLWN L+ + S V V
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHV----- 68
Query: 165 AFWAADHQWEGELFATAGA--QIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAAS 222
+ F + G Q+ W+ + + I F +V+FN +++A
Sbjct: 69 -------TSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSA- 120
Query: 223 TSGGSRSIILYDIRMASPVRKMMMETKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDE 282
G RS+ ++D R S +++T +++ + + DG ++D R E
Sbjct: 121 --GFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGRE 178
Query: 283 AKCVHKDHVF-PVLDIDYSPTGREFVTGSYDRTLRLFPYNGGHSKEIY--HTKRMQRVFC 339
D++ PV I S G + G D TLRL G ++Y H + + C
Sbjct: 179 M----SDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDC 234
Query: 340 VKFSGDGSYVISGSDDTNLRLW 361
+ D ++VI GS+D + W
Sbjct: 235 CLTNSD-AHVIGGSEDGLVFFW 255
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 129/328 (39%), Gaps = 79/328 (24%)
Query: 56 RPF--IGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVR 113
+P+ + ++GH A+SC+ K + + S S+D + LW + ++++ GH +
Sbjct: 31 KPYRHLKTLEGHTAAISCV-KFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGIS 89
Query: 114 GLTVSTDGRILVSCGTDCTVRLWNV--PVDTLMDSDDSTKNT----VEPASVYVLKNAFW 167
L S+D S DCT+R+W+ P + L T P S ++ +F
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 168 AADHQWE---GELFATAGAQIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTS 224
WE G+ A S PI+ SV FN +++AS
Sbjct: 150 ETIRIWEVKTGKCVRMIKAH--------SMPIS----------SVHFNRDGSLIVSASHD 191
Query: 225 GGSRSIILYDIRMASPVRKMMMETKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAK 284
G + ++D + + + K +++ K+ ++S+ P
Sbjct: 192 GSCK---IWDAKEGTCL-KTLIDDKSPAVSFAKFSP------------------------ 223
Query: 285 CVHKDHVFPVLDIDYSPTGREFVTGSYDRTLRLFPYNGGHSKEIYHTKRMQRVFCVK--F 342
G+ + + D TL+L Y G ++Y T +VFC+ F
Sbjct: 224 -----------------NGKFILVATLDSTLKLSNYATGKFLKVY-TGHTNKVFCITSAF 265
Query: 343 S-GDGSYVISGSDDTNLRLWKAKASEQL 369
S +G Y++SGS+D + LW +A L
Sbjct: 266 SVTNGKYIVSGSEDNCVYLWDLQARNIL 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 265 AANEDGNCYSYDARKLDEAKCVHKDHVFPVLDIDYSPTGREFVTGSYDRTLRLFPYNGGH 324
+A++D +DAR E V + H V ++++P V+GS+D T+R++ G
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Query: 325 SKEIYHTKRMQRVFCVKFSGDGSYVISGSDDTNLRLWKAKASEQLGVIL 373
+ M + V F+ DGS ++S S D + ++W AK L ++
Sbjct: 162 CVRMIKAHSMP-ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
>AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like
superfamily protein | chr4:14597728-14599157 FORWARD
LENGTH=321
Length = 321
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 45/260 (17%)
Query: 82 IFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVD 141
+ +GS+D ++LW V GH V L G I S D VR+++V +
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTN 92
Query: 142 TLMDSDDSTKNTVEPASVYVLK---NAFWAADHQWEGELFATAG---AQIDIWNHNRSQP 195
A++ VL+ + W + +G + A AG A + +W+ +
Sbjct: 93 ---------------ATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRL 137
Query: 196 INSFTWG-------SDTT------ISVRFNPGEPNLLAASTSGGSRSIILYDIRMASPVR 242
I++ + SD T +SV ++P L S G +I ++D+ + +
Sbjct: 138 ISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDG---TICVFDVDRSKLLH 194
Query: 243 KMM-METKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCV---HKDHVFPVLDID 298
++ S+ ++P++P + ++DG+ +DA E K + H VL +D
Sbjct: 195 QLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDA----EGKTLLGSMSGHTSWVLSVD 250
Query: 299 YSPTGREFVTGSYDRTLRLF 318
SP G TGS DRT+RL+
Sbjct: 251 ASPDGGAIATGSSDRTVRLW 270
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 123/277 (44%), Gaps = 36/277 (12%)
Query: 108 HQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYV-----L 162
H AV + S+DGR+L S D T+R + + +T+ D EP + +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTI--NTINDP------IAEPVQEFTGHENGI 74
Query: 163 KNAFWAADHQWEGELFATAGAQIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAAS 222
+ +++D ++ + A+ + +W+ I + ++ V FNP +++ S
Sbjct: 75 SDVAFSSDARFI--VSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGS 132
Query: 223 TSGGSRSIILYDIRMASPVRKMMMETKTNSISWNPMEPLNF-------TAANEDGNCYSY 275
++ ++D+ ++ + + +P+ ++F +++ DG C +
Sbjct: 133 FD---ETVRIWDVTTGKCLKVLPAHS-------DPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Query: 276 DARKLDEAKCVHKDHVFPVLDIDYSPTGREFVTGSYDRTLRLFPYNGGHSKEIYHTKRMQ 335
D+ K + D PV + +SP G+ + G+ D TLRL+ + + Y T +
Sbjct: 183 DSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTY-TGHVN 241
Query: 336 RVFCVK--FS-GDGSYVISGSDDTNLRLWKAKASEQL 369
+C+ FS +G ++SGS+D + +W+ + + L
Sbjct: 242 AQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLL 278
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 48 VKLDKIFARPFIGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPG 107
+KL + I + GH + C+ +P Q I SGS D +R+WD+ + + + P
Sbjct: 95 LKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSNMIVSGSFDETVRIWDVTTGKCLKVLPA 153
Query: 108 HQGAVRGLTVSTDGRILVSCGTDCTVRLWNVP----VDTLMDSDD 148
H V + + DG ++VS D R+W+ V TL+D ++
Sbjct: 154 HSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 32 LRPQEKAVEYVRALNAVKLDKIFARPFIGAMDGHIDAVSCM--AKDPSQLKHIFSGSMDG 89
P K + N ++L I + F+ GH++A C+ A + K I SGS D
Sbjct: 206 FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN 265
Query: 90 DIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLW 136
+ +W++ S++ + + GH V + ++ S D TVR+W
Sbjct: 266 CVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>AT2G22040.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:9374576-9376260 REVERSE LENGTH=313
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 132/306 (43%), Gaps = 41/306 (13%)
Query: 81 HIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTD-GRILVSCGTDCTVRLWN-- 137
++ + S D IRLW + R + F V L ++ + G+++ +C +RL++
Sbjct: 12 YLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPH--IRLFDLR 69
Query: 138 -----VPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATAG--AQIDIWNH 190
+PV + TKN + A Q+ G + + + IW+
Sbjct: 70 SYNPHIPVRNFVSH---TKNVM-------------AVGFQYTGHMMYSGSEDGSVKIWDL 113
Query: 191 NRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMASPVRKMMMETKT 250
+ F S +V +P + L++ +G R ++D+R +++ E T
Sbjct: 114 RVRECQREFRSVSPVN-TVVLHPNQTELISGDQNGNIR---VWDLRADLCSCELVPEVGT 169
Query: 251 NSISWNPM-EPLNFTAANEDGNCYSY----DARKLDEAKCVHK--DHVFPVLDIDYSP-T 302
S M + AAN+ G CY + + + + E + +HK H +L SP
Sbjct: 170 PIRSLTVMWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGN 229
Query: 303 GREFVTGSYDRTLRLFPYNGGHSKEIYHTKRMQRVFCVKFSGDGSYVISGSDDTNLRLWK 362
R T S D+T++++ +G +++ T + V+ FS DG Y+++ S DT RLW
Sbjct: 230 NRYLATASSDKTVKIWNLDGFKLEKVL-TGHERWVWDCDFSMDGEYLVTASSDTTARLWS 288
Query: 363 AKASEQ 368
+A ++
Sbjct: 289 MRAGKE 294
>AT1G62020.1 | Symbols: | Coatomer, alpha subunit |
chr1:22919814-22923728 FORWARD LENGTH=1216
Length = 1216
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 119/292 (40%), Gaps = 48/292 (16%)
Query: 82 IFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVP-- 139
I + G I+LWD + +F H+G VRG+ + VS G D +++WN
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNH 83
Query: 140 --VDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATAGAQIDIWNHNRSQPIN 197
+ TL+ D Y+ F H++ + A+ I IWN ++
Sbjct: 84 RCLFTLLGHLD-----------YIRTVQF---HHEYPWIVSASDDQTIRIWNWQSRTCVS 129
Query: 198 SFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDI-----RMASPVRKMMMETKTNS 252
T + + F+P E +++AS +++ ++DI + SP +M T+ NS
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASL---DQTVRVWDIGALRKKTVSPADDIMRLTQMNS 186
Query: 253 ISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVLDIDYSPTGREFVTGSYD 312
+ ++ + K V + H V + PT V+G+ D
Sbjct: 187 DLFGGVDAI---------------------VKYVLEGHDRGVNWAAFHPTLPLIVSGADD 225
Query: 313 RTLRLFPYNGGHSKEIYHTK-RMQRVFCVKFSGDGSYVISGSDDTNLRLWKA 363
R ++L+ N + E+ + M V V F ++S S+D ++R+W A
Sbjct: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
>AT3G18130.1 | Symbols: RACK1C_AT | receptor for activated C kinase
1C | chr3:6211109-6212371 REVERSE LENGTH=326
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 118/293 (40%), Gaps = 64/293 (21%)
Query: 83 FSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVD- 141
SGS DG++RLWD+A+ T +F GH V + STD R +VS D T++LWN +
Sbjct: 79 LSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGEC 138
Query: 142 --TLMDSDDSTK---------NTVEPASVYVLKNAFWAADHQWEGELFATAGAQIDIWNH 190
T+ + D + NT+ P V A+ + +WN
Sbjct: 139 KYTISEGDGHKEWVSCVRFSPNTLVPTIVS------------------ASWDKTVKVWNL 180
Query: 191 NRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSII-LYDIRMASPVRKMMMETK 249
+ NS S +V +P + +L A SGG +I L+D+ + + +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSP-DGSLCA---SGGKDGVILLWDLAEGKKLYSLEAGSI 236
Query: 250 TNSISWNPMEPLNFTAANEDGNCYSYDARKLD-EAKCVHKDHVFPVLDIDYSPTGREFVT 308
+S+ ++P AA E+ R D E+K V +D L +D +
Sbjct: 237 IHSLCFSPNRYW-LCAATEN------SIRIWDLESKSVVED-----LKVDLKSEAEKNEG 284
Query: 309 GSYDRTLRLFPYNGGHSKEIYHTKRMQRVFCVKFSGDGSYVISGSDDTNLRLW 361
G G K IY T + +S DGS + SG D +R+W
Sbjct: 285 G---------VGTGNQKKVIYCTS-------LNWSADGSTLFSGYTDGVVRVW 321
>AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 |
chr4:9023775-9027443 FORWARD LENGTH=486
Length = 486
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 128/311 (41%), Gaps = 29/311 (9%)
Query: 62 MDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDG 121
+ GH+ V +A DPS + +GS D I++WD+A+ GH VRGL VS
Sbjct: 172 IQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 122 RILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATA 181
+ S G D V+ W++ + ++ S + VY L A H ++ T
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHG-----HLSGVYCL------ALHP-TLDVLLTG 278
Query: 182 G--AQIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMAS 239
G + +W+ I + + +T SV P +P ++ S +I +D+R
Sbjct: 279 GRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSH---DTTIKFWDLRYGK 335
Query: 240 PVRKMMMETKT-NSISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVLDID 298
+ + K+ +++ +P E +A+ ++ +S + + + + ++
Sbjct: 336 TMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVN 395
Query: 299 YSPTGREFVTGSYDRTLRLFPYNGGHSKEIYHT-------KRMQRVFCVKFSGDGSYVIS 351
VTG + ++ + + GHS + T + ++ + GS +++
Sbjct: 396 EDGV---MVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVT 452
Query: 352 GSDDTNLRLWK 362
D +++WK
Sbjct: 453 CEADKTIKMWK 463
>AT2G21390.1 | Symbols: | Coatomer, alpha subunit |
chr2:9152428-9156577 FORWARD LENGTH=1218
Length = 1218
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 118/292 (40%), Gaps = 48/292 (16%)
Query: 82 IFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVD 141
I + G I+LWD + +F H+G VRG+ + VS G D +++WN
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTH 83
Query: 142 ----TLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATAGAQIDIWNHNRSQPIN 197
TL+ D Y+ F H+ + A+ I IWN I+
Sbjct: 84 RCLFTLLGHLD-----------YIRTVQF---HHENPWIVSASDDQTIRIWNWQSRTCIS 129
Query: 198 SFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDI-----RMASPVRKMMMETKTNS 252
T + + F+P E +++AS +++ ++DI + ASP +M ++ NS
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASL---DQTVRVWDIGALKKKSASPADDLMRFSQMNS 186
Query: 253 ISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVLDIDYSPTGREFVTGSYD 312
+ ++ + K V + H V + PT V+G+ D
Sbjct: 187 DLFGGVDAI---------------------VKYVLEGHDRGVNWASFHPTLPLIVSGADD 225
Query: 313 RTLRLFPYNGGHSKEIYHTK-RMQRVFCVKFSGDGSYVISGSDDTNLRLWKA 363
R ++L+ N + E+ + M V V F ++S S+D ++R+W A
Sbjct: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
>AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein |
chr5:26857268-26860974 FORWARD LENGTH=613
Length = 613
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 110/260 (42%), Gaps = 31/260 (11%)
Query: 82 IFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVD 141
+ +GS DG R+W + + + H+G + L + G L++ D T +W+V +
Sbjct: 339 LATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAE 397
Query: 142 TLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGEL-FATAG--AQIDIWNHNRSQPINS 198
K E S L D W + FAT+ + I + ++P +
Sbjct: 398 EW-------KQQFEFHSGPTL-------DVDWRNNVSFATSSTDSMIYLCKIGETRPAKT 443
Query: 199 FTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMASPVRKMMMETK-TNSISWNP 257
FT V+++P +LLA+ + + I ++I+ ++ V + TK +I W+P
Sbjct: 444 FTGHQGEVNCVKWDP-TGSLLASCSDDSTAKI--WNIKQSTFVHDLREHTKEIYTIRWSP 500
Query: 258 MEP--------LNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVLDIDYSPTGREFVTG 309
P L +A+ D +DA +L + C H PV + +SP G +G
Sbjct: 501 TGPGTNNPNKQLTLASASFDSTVKLWDA-ELGKMLCSFNGHREPVYSLAFSPNGEYIASG 559
Query: 310 SYDRTLRLFPYNGGHSKEIY 329
S D+++ ++ G + Y
Sbjct: 560 SLDKSIHIWSIKEGKIVKTY 579
>AT3G18140.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:6212743-6214567 REVERSE LENGTH=305
Length = 305
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 208 SVRFNPGEPNLLAASTSGGSRSIILYDIRMASPVRKMMMETKTNSISWNPM-EPLNFTAA 266
+V +P + L++ +G R ++D+R S +++ E T S M + AA
Sbjct: 124 TVVLHPNQTELISGDQNGNIR---VWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAA 180
Query: 267 NEDGNCYSY----DARKLDEAKCVHK--DHVFPVLDIDYSPTGREFVTGSYDRTLRLFPY 320
N G CY + + + E + +HK H +L SP + T S D+T++++
Sbjct: 181 NNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNV 240
Query: 321 NGGHSKEIYHTKRMQRVFCVKFSGDGSYVISGSDDTNLRLWKAKASEQLGV 371
+G +++ T + V+ FS DG ++++ S D RLW A +++ V
Sbjct: 241 DGFKLEKVL-TGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKV 290
>AT1G48630.1 | Symbols: RACK1B_AT | receptor for activated C kinase
1B | chr1:17981977-17983268 REVERSE LENGTH=326
Length = 326
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 83 FSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWN 137
SGS DG++RLWD+A+ + +F GH V + STD R +VS D T++LWN
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 59 IGAMDGHIDAVSCMAKDPSQL-KHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTV 117
I DGH + VSC+ P+ L I S S D +++W++ + + GH G + + V
Sbjct: 142 ISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAV 201
Query: 118 STDGRILVSCGTDCTVRLWNVP 139
S DG + S G D + LW++
Sbjct: 202 SPDGSLCASGGKDGVILLWDLA 223
>AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:5671133-5675106 FORWARD LENGTH=479
Length = 479
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 128/321 (39%), Gaps = 50/321 (15%)
Query: 62 MDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDG 121
+ GH+ V +A DPS + +GS D I++WD+A+ GH G VRGL VS
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 122 RILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATA 181
+ S G D V+ W++ + ++ S + VY L A + L
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLH-----GVYCL-----ALHPTLDVVLTGGR 274
Query: 182 GAQIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMASPV 241
+ +W+ I SD SV P +P ++ S +I +D+R +
Sbjct: 275 DSVCRVWDIRTKMQIFVLPHDSD-VFSVLARPTDPQVITGSHDS---TIKFWDLRYGKSM 330
Query: 242 RKMMMETKT-NSISWNPMEPLNFTAANEDG----------NCYSYDA--RKLDEAKCVHK 288
+ KT +++ +P E +F +A+ D C++ + R + A V++
Sbjct: 331 ATITNHKKTVRAMALHPKEN-DFVSASADNIKKFSLPKGEFCHNMLSLQRDIINAVAVNE 389
Query: 289 DHVFPVLDIDYSPTGREFVTGSYDRTLRLFPYNGGH----SKEIYHTKRMQR---VFCVK 341
D V VTG L + + GH ++ I ++ ++
Sbjct: 390 DGV--------------MVTGGDKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAAC 435
Query: 342 FSGDGSYVISGSDDTNLRLWK 362
+ GS +++ D +++WK
Sbjct: 436 YDQTGSRLVTCEGDKTIKMWK 456
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Query: 44 ALNAVKLDKIFARPFIGAMDGHIDAVSCMAKDPSQLKHIF-SGSMDGDIRLWDIASRRTV 102
A +KL + + + GH +C++ D F SGS+D ++++WDI + +
Sbjct: 79 ASGTIKLWDLEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCI 136
Query: 103 YQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVL 162
+ + GH V L + DGR +VS G D V++W++ L+ S + ++ +
Sbjct: 137 HTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFH-- 194
Query: 163 KNAFWAADHQWEGELFATAGAQ--IDIWNHNRSQPINSFTWGSDTTISVR---FNPGEPN 217
H++ L AT A + W+ + I S G T VR FNP
Sbjct: 195 -------PHEF---LLATGSADRTVKFWDLETFELIGS---GGPETAGVRCLSFNPDGKT 241
Query: 218 LLAA 221
+L
Sbjct: 242 VLCG 245
>AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein /
small nuclear ribonucleoprotein Prp4p-related |
chr2:17304319-17306855 REVERSE LENGTH=554
Length = 554
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 58 FIGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTV 117
+ +GH+D ++ +A PS K++ + S D RLWDI + + GH +V G+
Sbjct: 331 LLQTFEGHLDRLARVAFHPSG-KYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAF 389
Query: 118 STDGRILVSCGTDCTVRLWNV 138
DG + SCG D R+W++
Sbjct: 390 QQDGALAASCGLDSLARVWDL 410
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Query: 44 ALNAVKLDKIFARPFIGAMDGHIDAVSCMAKDPSQLKHIF-SGSMDGDIRLWDIASRRTV 102
A +KL + + + GH +C++ D F SGS+D ++++WDI + +
Sbjct: 79 ASGTIKLWDLEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCI 136
Query: 103 YQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVL 162
+ + GH V L + DGR +VS G D V++W++ L+ S + ++ +
Sbjct: 137 HTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFH-- 194
Query: 163 KNAFWAADHQWEGELFATAGAQ--IDIWNHNRSQPINSFTWGSDTTISVR---FNPGEPN 217
H++ L AT A + W+ + I S G T VR FNP
Sbjct: 195 -------PHEF---LLATGSADRTVKFWDLETFELIGS---GGPETAGVRCLSFNPDGKT 241
Query: 218 LLAA 221
+L
Sbjct: 242 VLCG 245
>AT3G15610.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:5291076-5292796 REVERSE LENGTH=341
Length = 341
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 16/280 (5%)
Query: 58 FIGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTV 117
+IG +GH AV D + L+ + + +LWD + ++ F H+ VR
Sbjct: 53 WIGTFEGHKGAVWSSCLDNNALRAASASADF-SAKLWDALTGDVLHSFE-HKHIVRACAF 110
Query: 118 STDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGEL 177
S D + L++ G + +R++++ +D+ T+ P S+ L W Q
Sbjct: 111 SQDTKYLITGGFEKILRVFDL---NRLDAP-PTEIDKSPGSIRTLT---WLHGDQTILSS 163
Query: 178 FATAGAQIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRM 237
G + +W+ + + + S T + G +T+ GS ++ +D
Sbjct: 164 CTDIGG-VRLWDVRSGKIVQTLETKSPVTSAEVSQDGR----YITTADGS-TVKFWDANH 217
Query: 238 ASPVRKMMMETKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVLDI 297
V+ M S S P F A ED +D E C +K H PV +
Sbjct: 218 FGLVKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGC-NKGHHGPVHCV 276
Query: 298 DYSPTGREFVTGSYDRTLRLFPYNGGHSKEIYHTKRMQRV 337
++PTG + +GS D T+R++ + +EI +K Q V
Sbjct: 277 RFAPTGESYASGSEDGTIRIWQTGPVNPEEISESKPKQSV 316
>AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331506 REVERSE LENGTH=653
Length = 653
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 93/242 (38%), Gaps = 18/242 (7%)
Query: 80 KHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVP 139
++ SG G ++ W H+ ++R L+ SC D TV++W+
Sbjct: 184 NYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD-- 241
Query: 140 VDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATAGAQ--IDIWNHNRSQPIN 197
+D T + + SV D L + G + +W+ + +
Sbjct: 242 FTKCVDESSLTGHGWDVKSV----------DWHPTKSLLVSGGKDQLVKLWDTRSGRELC 291
Query: 198 SFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMASPVRKMMMETK-TNSISWN 256
S + +SV++N LL AS + I LYDIR ++ TK S++W+
Sbjct: 292 SLHGHKNIVLSVKWNQNGNWLLTASK---DQIIKLYDIRTMKELQSFRGHTKDVTSLAWH 348
Query: 257 PMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVLDIDYSPTGREFVTGSYDRTLR 316
P F + + DG+ + + + H V D+ + P G +GS D T +
Sbjct: 349 PCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTK 408
Query: 317 LF 318
+
Sbjct: 409 FW 410
>AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 29/257 (11%)
Query: 71 CMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTD 130
C + + +I G+ G +++WD + V GHQ R ++ + RIL S D
Sbjct: 219 CSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQ--TRTGVLAWNSRILSSGSRD 276
Query: 131 CTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATAGA--QIDIW 188
+ + D + SD +K + V LK W+ D + EL A+ G Q+ +W
Sbjct: 277 RNI----LQHDIRVQSDFVSKLVGHKSEVCGLK---WSHDDR---EL-ASGGNDNQLLVW 325
Query: 189 NHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMASPVRKMMMET 248
N++ QPI T + ++ ++P + +LLA+ R I ++ + + + +
Sbjct: 326 NNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGS 385
Query: 249 KTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAK-------CVHKDHVFPVLDIDYSP 301
+ +++W+ NE + + Y ++ K H VL + SP
Sbjct: 386 QVCNLAWSK-------NVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSP 438
Query: 302 TGREFVTGSYDRTLRLF 318
G+ VTG+ D TLR +
Sbjct: 439 DGQTIVTGAGDETLRFW 455
>AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 29/257 (11%)
Query: 71 CMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTD 130
C + + +I G+ G +++WD + V GHQ R ++ + RIL S D
Sbjct: 219 CSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQ--TRTGVLAWNSRILSSGSRD 276
Query: 131 CTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATAGA--QIDIW 188
+ + D + SD +K + V LK W+ D + EL A+ G Q+ +W
Sbjct: 277 RNI----LQHDIRVQSDFVSKLVGHKSEVCGLK---WSHDDR---EL-ASGGNDNQLLVW 325
Query: 189 NHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMASPVRKMMMET 248
N++ QPI T + ++ ++P + +LLA+ R I ++ + + + +
Sbjct: 326 NNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGS 385
Query: 249 KTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAK-------CVHKDHVFPVLDIDYSP 301
+ +++W+ NE + + Y ++ K H VL + SP
Sbjct: 386 QVCNLAWSK-------NVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSP 438
Query: 302 TGREFVTGSYDRTLRLF 318
G+ VTG+ D TLR +
Sbjct: 439 DGQTIVTGAGDETLRFW 455
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 23/192 (11%)
Query: 36 EKAVEYVRALNAVKLDKIFARPFIGAMDGHIDAVSCMAKDPSQLKHIF-SGSMDGDIRLW 94
E V A +KL + + + GH +C++ + F SGS+D ++++W
Sbjct: 71 EGLVAAGAASGTIKLWDLEEAKVVRTLTGH--RSNCVSVNFHPFGEFFASGSLDTNLKIW 128
Query: 95 DIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTV 154
DI + ++ + GH V L + DGR +VS G D V++W++ L+ S + +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKI 188
Query: 155 EPASVYVLKNAFWAADHQWEGELFATAGAQ--IDIWNHNRSQPINSFTWGSDTTISVR-- 210
+ + H++ L AT A + W+ + I S G T VR
Sbjct: 189 QSLDFH---------PHEF---LLATGSADKTVKFWDLETFELIGS---GGTETTGVRCL 233
Query: 211 -FNPGEPNLLAA 221
FNP ++L
Sbjct: 234 TFNPDGKSVLCG 245
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 177 LFATAGA--QIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYD 234
+ T G ++++W + I S S SV F+ E + A + SG +I L+D
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASG---TIKLWD 87
Query: 235 IRMASPVRKMMMETKTNSISWNPMEPLN--FTAANEDGNCYSYDARKLDEAKCVH--KDH 290
+ A VR + ++N +S N P F + + D N +D RK C+H K H
Sbjct: 88 LEEAKVVRTLTGH-RSNCVSVN-FHPFGEFFASGSLDTNLKIWDIRK---KGCIHTYKGH 142
Query: 291 VFPVLDIDYSPTGREFVTGSYDRTLRLFPYNGGHSKEIYHTKRMQ-RVFCVKFSGDGSYV 349
V + ++P GR V+G D ++++ G K ++ K + ++ + F +
Sbjct: 143 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAG--KLLHEFKSHEGKIQSLDFHPHEFLL 200
Query: 350 ISGSDDTNLRLWKAKASEQLG 370
+GS D ++ W + E +G
Sbjct: 201 ATGSADKTVKFWDLETFELIG 221
>AT1G18080.1 | Symbols: ATARCA, RACK1A_AT, RACK1A | Transducin/WD40
repeat-like superfamily protein | chr1:6222325-6223901
FORWARD LENGTH=327
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 63 DGHIDAVSCMAKDPSQLK-HIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDG 121
+GH D VSC+ P+ L+ I S S D +++W++++ + GH G V + VS DG
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 122 RILVSCGTDCTVRLWNVP 139
+ S G D V LW++
Sbjct: 207 SLCASGGKDGVVLLWDLA 224
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 83 FSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWN 137
SGS DG++RLWD+A+ + +F GH V + S D R +VS D T++LWN
Sbjct: 79 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 133
>AT5G49430.1 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr5:20037338-20045454 REVERSE
LENGTH=1677
Length = 1677
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 34 PQEKAVEYVRALNAVKLDKIFARPFIGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRL 93
P +A YV A + + K+ I + GH +AV C D S +++ +GS D +++
Sbjct: 216 PSIRAACYVIAKPSSMVQKMQN---IKRLRGHRNAVYCAILDRSG-RYVITGSDDRLVKV 271
Query: 94 WDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVP 139
W + + + GH+G + L VS++ + S DC +R+W +P
Sbjct: 272 WSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLP 317
>AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331557 REVERSE LENGTH=647
Length = 647
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 93/242 (38%), Gaps = 18/242 (7%)
Query: 80 KHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVP 139
++ SG G ++ W H+ ++R L+ SC D TV++W+
Sbjct: 178 NYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD-- 235
Query: 140 VDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATAGAQ--IDIWNHNRSQPIN 197
+D T + + SV D L + G + +W+ + +
Sbjct: 236 FTKCVDESSLTGHGWDVKSV----------DWHPTKSLLVSGGKDQLVKLWDTRSGRELC 285
Query: 198 SFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDIRMASPVRKMMMETK-TNSISWN 256
S + +SV++N LL AS + I LYDIR ++ TK S++W+
Sbjct: 286 SLHGHKNIVLSVKWNQNGNWLLTASK---DQIIKLYDIRTMKELQSFRGHTKDVTSLAWH 342
Query: 257 PMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVLDIDYSPTGREFVTGSYDRTLR 316
P F + + DG+ + + + H V D+ + P G +GS D T +
Sbjct: 343 PCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTK 402
Query: 317 LF 318
+
Sbjct: 403 FW 404
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 82 IFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNVPVD 141
+ + S D +++W I+ + F GH +V + TDG VSCG D ++LWNV
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTS 615
Query: 142 TLMDSDDSTKNTVEPASVYVLKNAFWAADHQWEGELFATAG--AQIDIWN 189
+ + D ++ V WA + E+ AT G A I++W+
Sbjct: 616 ECIATYDQHEDKV------------WALAVGKKTEMIATGGGDAVINLWH 653
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 62 MDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDG 121
++G D ++ +A P K +FS IR+WD+ + + + + GH+G V G+ G
Sbjct: 56 IEGESDTLTALALSPDD-KLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASG 114
Query: 122 RILVSCGTDCTVRLWNV 138
+L + G D V +W+V
Sbjct: 115 GLLATAGADRKVLVWDV 131
>AT1G15470.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:5315838-5317696 FORWARD LENGTH=333
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 20/263 (7%)
Query: 58 FIGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTV 117
+IG +GH AV + D + ++ S S D ++W+ + ++ F H+ VR
Sbjct: 48 WIGTFEGHKGAVWSCSLDKNAIR-AASASADFTAKIWNALTGDELHSFE-HKHIVRACAF 105
Query: 118 STDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTV--EPASVYVLKNAFWAADHQWEG 175
S D L++ G + +R+++ ++ D+ V P S+ ++ + +D+
Sbjct: 106 SEDTHRLLTGGMEKILRIFD------LNRPDAPPKEVGNSPGSIRTVE--WLHSDNTILS 157
Query: 176 ELFATAGAQIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDI 235
T I +W+ + +++ S T + G +T+ GS S+ +D
Sbjct: 158 SCTDTG--DIRLWDIRSDKIVHTLETKSPVTSAEVSQDGR----YITTADGS-SVKFWDA 210
Query: 236 RMASPVRKMMMETKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVL 295
+ ++ M S S P F A ED + +D + +E C +K H PV
Sbjct: 211 KNFGLLKSYDMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGC-NKGHHGPVH 269
Query: 296 DIDYSPTGREFVTGSYDRTLRLF 318
+ Y+P G + +GS D T+R++
Sbjct: 270 CVRYAPGGESYTSGSEDGTVRIW 292
>AT1G10580.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3491560-3493665 REVERSE LENGTH=573
Length = 573
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 118/284 (41%), Gaps = 35/284 (12%)
Query: 99 RRTVYQFPGHQGAVRGLTV-STDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPA 157
+R V+ + GH V + G +L+S G DC V++W+V +S + + A
Sbjct: 272 KRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDV-----YNSGKCMRTYMGHA 326
Query: 158 SVYVLKNAFWAADHQWEGELFATAG--AQIDIWNHNRSQPINSFTWGSDTTISVRFNPGE 215
+++ ++ D G F TAG I W+ Q I++F+ G + V+ NP +
Sbjct: 327 K--AVRDICFSND----GSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYV-VKLNPDD 379
Query: 216 --PNLLAASTSGGSRSIILYDIRMASPVRKMMMET-KTNSISWNPMEPLNFTAANEDGNC 272
N+L A S + I+ +DI ++ N+I++ F +++D +
Sbjct: 380 DKQNILLAGMS--DKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNN-RRFVTSSDDKSL 436
Query: 273 YSYDARKLDEAKCVHKDHVFPVLDIDYSPTGREFVTGSYDRTLRLFPYNGGHSKEIYHTK 332
++ K + + H+ + I P G S D + ++ ++E +
Sbjct: 437 RVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYS-----TRERFQLN 491
Query: 333 RMQRV--------FC-VKFSGDGSYVISGSDDTNLRLWKAKASE 367
+ +R C V FS DG +V+SG + W K+ +
Sbjct: 492 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 535
>AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16479266 REVERSE LENGTH=377
Length = 377
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 131/322 (40%), Gaps = 36/322 (11%)
Query: 62 MDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDG 121
+ GH V + P + I S S DG + +W+ + + + V S +G
Sbjct: 61 LQGHTGKVYSLDWTPER-NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 122 RILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQW----EGEL 177
+ + G D ++++ S + K+ P S + + + + Q+ + L
Sbjct: 120 QSVACGGLDSVCSIFSL-------SSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHL 172
Query: 178 FATAGAQIDI-WNHNRSQPINSF-----TWGSDTTISVRFNPGEPN-LLAASTSGGSRSI 230
++G Q I W+ + F + + +SV + PN ++ S +R
Sbjct: 173 ITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTAR-- 230
Query: 231 ILYDIRMASPVRKMMM--ETKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHK 288
L+D R AS + E N++ + P + F ++DG C YD R + + V++
Sbjct: 231 -LWDTRAASRAVRTFHGHEGDVNTVKFFP-DGYRFGTGSDDGTCRLYDIRTGHQLQ-VYQ 287
Query: 289 DHV----FPVLDIDYSPTGREFVTGSYDRTLRLFPYNGGHSKEIYHTKRMQ-----RVFC 339
H PV I +S +GR G Y + ++ + + Q R+ C
Sbjct: 288 PHGDGENGPVTSIAFSVSGRLLFAG-YASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISC 346
Query: 340 VKFSGDGSYVISGSDDTNLRLW 361
+ S DGS + +GS D+NL++W
Sbjct: 347 LGLSADGSALCTGSWDSNLKIW 368
>AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16479266 REVERSE LENGTH=372
Length = 372
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 131/322 (40%), Gaps = 36/322 (11%)
Query: 62 MDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDG 121
+ GH V + P + I S S DG + +W+ + + + V S +G
Sbjct: 56 LQGHTGKVYSLDWTPER-NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 114
Query: 122 RILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVEPASVYVLKNAFWAADHQW----EGEL 177
+ + G D ++++ S + K+ P S + + + + Q+ + L
Sbjct: 115 QSVACGGLDSVCSIFSL-------SSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHL 167
Query: 178 FATAGAQIDI-WNHNRSQPINSF-----TWGSDTTISVRFNPGEPN-LLAASTSGGSRSI 230
++G Q I W+ + F + + +SV + PN ++ S +R
Sbjct: 168 ITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTAR-- 225
Query: 231 ILYDIRMASPVRKMMM--ETKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHK 288
L+D R AS + E N++ + P + F ++DG C YD R + + V++
Sbjct: 226 -LWDTRAASRAVRTFHGHEGDVNTVKFFP-DGYRFGTGSDDGTCRLYDIRTGHQLQ-VYQ 282
Query: 289 DHV----FPVLDIDYSPTGREFVTGSYDRTLRLFPYNGGHSKEIYHTKRMQ-----RVFC 339
H PV I +S +GR G Y + ++ + + Q R+ C
Sbjct: 283 PHGDGENGPVTSIAFSVSGRLLFAG-YASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISC 341
Query: 340 VKFSGDGSYVISGSDDTNLRLW 361
+ S DGS + +GS D+NL++W
Sbjct: 342 LGLSADGSALCTGSWDSNLKIW 363
>AT2G47410.2 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr2:19449133-19456991 FORWARD
LENGTH=1519
Length = 1519
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 59 IGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVS 118
I + GH +AV C D S +++ +GS D +++W + + + GH+G + L VS
Sbjct: 228 IKKLRGHRNAVYCAIFDRSG-RYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVS 286
Query: 119 TDGRILVSCGTDCTVRLWNVP 139
++ ++ S D +R+W +P
Sbjct: 287 SNNALVASASNDFVIRVWRLP 307
>AT2G47410.1 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr2:19449133-19456991 FORWARD
LENGTH=1520
Length = 1520
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 59 IGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVS 118
I + GH +AV C D S +++ +GS D +++W + + + GH+G + L VS
Sbjct: 229 IKKLRGHRNAVYCAIFDRSG-RYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVS 287
Query: 119 TDGRILVSCGTDCTVRLWNVP 139
++ ++ S D +R+W +P
Sbjct: 288 SNNALVASASNDFVIRVWRLP 308
>AT1G52730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:19642866-19644978 FORWARD LENGTH=343
Length = 343
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 20/263 (7%)
Query: 58 FIGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTV 117
+IG +GH AV D + L+ + + +LWD + ++ F H+ VR
Sbjct: 53 WIGTFEGHKGAVWSSCLDNNALRAASASADF-SAKLWDALTGDVLHSFE-HKHIVRACAF 110
Query: 118 STDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVE--PASVYVLKNAFWAADHQWEG 175
S D + L++ G + +R+++ M+ D+ V+ P S+ L W Q
Sbjct: 111 SEDTKSLLTGGFEKILRVFD------MNRLDAPPTEVDKSPGSIRTLT---WLHSDQTIL 161
Query: 176 ELFATAGAQIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDI 235
G + +W+ + + + S T + G +T+ GS ++ +D
Sbjct: 162 SSCTDIGG-VRLWDVRSGKIVQTLETKSPVTSAEVSQDGR----YITTADGS-TVKFWDA 215
Query: 236 RMASPVRKMMMETKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVL 295
V+ M S S P F A ED +D +E C +K H PV
Sbjct: 216 NHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGC-NKGHHGPVH 274
Query: 296 DIDYSPTGREFVTGSYDRTLRLF 318
+ ++PTG + +GS D T+R++
Sbjct: 275 CVRFTPTGLSYASGSEDGTIRIW 297
>AT1G52730.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:19642866-19644978 FORWARD LENGTH=343
Length = 343
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 20/263 (7%)
Query: 58 FIGAMDGHIDAVSCMAKDPSQLKHIFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTV 117
+IG +GH AV D + L+ + + +LWD + ++ F H+ VR
Sbjct: 53 WIGTFEGHKGAVWSSCLDNNALRAASASADF-SAKLWDALTGDVLHSFE-HKHIVRACAF 110
Query: 118 STDGRILVSCGTDCTVRLWNVPVDTLMDSDDSTKNTVE--PASVYVLKNAFWAADHQWEG 175
S D + L++ G + +R+++ M+ D+ V+ P S+ L W Q
Sbjct: 111 SEDTKSLLTGGFEKILRVFD------MNRLDAPPTEVDKSPGSIRTLT---WLHSDQTIL 161
Query: 176 ELFATAGAQIDIWNHNRSQPINSFTWGSDTTISVRFNPGEPNLLAASTSGGSRSIILYDI 235
G + +W+ + + + S T + G +T+ GS ++ +D
Sbjct: 162 SSCTDIGG-VRLWDVRSGKIVQTLETKSPVTSAEVSQDGR----YITTADGS-TVKFWDA 215
Query: 236 RMASPVRKMMMETKTNSISWNPMEPLNFTAANEDGNCYSYDARKLDEAKCVHKDHVFPVL 295
V+ M S S P F A ED +D +E C +K H PV
Sbjct: 216 NHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGC-NKGHHGPVH 274
Query: 296 DIDYSPTGREFVTGSYDRTLRLF 318
+ ++PTG + +GS D T+R++
Sbjct: 275 CVRFTPTGLSYASGSEDGTIRIW 297
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 82 IFSGSMDGDIRLWDIASRRTVYQFPGHQGAVRGLTVSTDGRILVSCGTDCTVRLWNV 138
IF+G +D D+++WD+ GHQ + G+++S DG L++ G D + +W++
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251