Miyakogusa Predicted Gene
- Lj3g3v2810110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2810110.1 Non Chatacterized Hit- tr|C5WV81|C5WV81_SORBI
Putative uncharacterized protein Sb01g016560
OS=Sorghu,28.2,2e-18,TPR-like,NULL; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide,CUFF.44717.1
(480 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 5e-96
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 1e-33
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 6e-33
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 138 7e-33
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 9e-32
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 132 5e-31
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 132 5e-31
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 6e-31
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 1e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 3e-29
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 6e-29
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 8e-29
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 4e-28
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 122 7e-28
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 120 2e-27
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 9e-27
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 9e-26
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 5e-25
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 6e-24
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 7e-24
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 9e-24
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 8e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 9e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 100 2e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 100 2e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 100 3e-21
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 98 1e-20
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 92 1e-18
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 89 7e-18
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 89 8e-18
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 88 1e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 86 8e-17
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 84 3e-16
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 79 7e-15
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 74 2e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 3e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 72 6e-13
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 72 6e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 72 1e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 71 2e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 70 2e-12
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 5e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 69 6e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 69 6e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 61 2e-09
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 60 3e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 59 7e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 57 2e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 4e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 2e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 54 2e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 53 4e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 4e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 7e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 50 3e-06
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 348 bits (893), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 198/461 (42%), Positives = 268/461 (58%), Gaps = 5/461 (1%)
Query: 10 SPCLHKLKTLPFSSQKMGMASLADTLYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRC 69
SP L + + + + S A+ LY L C ++E L+ +LDS C+ +V+ RC
Sbjct: 11 SPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRC 70
Query: 70 CPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTV 129
P Q Q G+RFFIWAG S +RHSAYMY KA +L I P +I +IESY E C V V
Sbjct: 71 DPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNV 130
Query: 130 NMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLRE 189
R VL LC +A LAD ALWVLRK +F DTV YN+VIRL KGD+ + + L++E
Sbjct: 131 KTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKE 190
Query: 190 MSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGS 249
M PD+ITY +MI G CNAG+ +DA+ L K+M H C N V S I +G+C+SG
Sbjct: 191 MDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGD 250
Query: 250 XXXXXXXXXXXXKS---GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHV 306
K G PN VTYT +IQ+FCE+ + EAL VLDRM GC+ N V
Sbjct: 251 MERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRV 310
Query: 307 TAFTLIDSLCDKG-CVEEAYRLVDKLVE-HGVSYGDCYSSLVISLIRIKRLEEAEKLFRE 364
TA LI + + V+ +L+DKLV+ GVS +C+SS +SLIR+KR EEAEK+FR
Sbjct: 311 TACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRL 370
Query: 365 LLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQK 424
+L ++PD LA S + +ELC+ +R LD F L +E GLCQ+
Sbjct: 371 MLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQ 430
Query: 425 NHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKSEEKDLV 465
+ EA KLAK ML K + L+ + + I+ L+K+ ++DL+
Sbjct: 431 GNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLM 471
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 133/249 (53%), Gaps = 3/249 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
+CK Q A +A+ +LRKME+ + D V Y+++I CK G ++ L EM +
Sbjct: 238 MCKSGQTA-LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D+ITY T+I G CNAGR +D LL+DM SPN+V S + D + G
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G PN +TY SLI FC+ ++ EA+ ++D M + GC + +T LI+ C
Sbjct: 357 KEMMQRG-IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
+++ L ++ GV Y++LV + +LE A+KLF+E+++ ++PD ++
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 377 SSLLLKELC 385
+LL LC
Sbjct: 476 YKILLDGLC 484
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 182/429 (42%), Gaps = 48/429 (11%)
Query: 53 IKPKLDSQCVIQVVSRCCPKQ----CQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGI-- 106
++P+L +++ CP + C+ G F R+ +Y + +S L+GI
Sbjct: 17 VQPRLLETGTLRIALINCPNELLFCCERGFSTF-------SDRNLSYRDKLSSGLVGIKA 69
Query: 107 DRNPQMICDLIESYEAE---------GCVVTVNMFREVLKLCKEAQLADVA--------- 148
D + D+I+S + + VL LCK+ + +A
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 149 -------------LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDA 195
+ K+ G PDTV++N ++ C + V +L+ M
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXX 255
P LIT T++ GLC G+ DA L+ M G PN V + + +C+SG
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
+ + + + V Y+ +I C+ + A N+ + M G A+ +T TLI
Sbjct: 250 LLRKMEER-NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 316 CDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
C+ G ++ +L+ +++ +S +S L+ S ++ +L EA++L +E++ + P+T
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 375 LASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLA 434
+ + L+ C ++R+ + ++D M + GC G C+ N + + +L
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGC--DPDIMTFNILINGYCKANRIDDGLELF 426
Query: 435 KIMLKKSVL 443
+ M + V+
Sbjct: 427 REMSLRGVI 435
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CKE +L + A+ ++ M G PD + +N++I CK ++ G +L REMSL
Sbjct: 378 FCKENRLEE-AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ +TY T+++G C +G+ E A L ++M P++V + DGLC +G
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
KS ++ Y +I C S+ ++A ++ + G + +I LC
Sbjct: 497 GKIEKS-KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 318 KGCVEEAYRLVDKLVEHG 335
K + +A L K+ E G
Sbjct: 556 KDSLSKADILFRKMTEEG 573
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 130/329 (39%), Gaps = 8/329 (2%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
AD A+ + R M P + +N + K E+ L ++M + T
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
MI C + A+S + + G P+ V+ + + +GLC + G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
+P ++T +L+ C + ++A+ ++DRM G N VT +++ +C G A
Sbjct: 189 H-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 325 YRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
L+ K+ E + YS ++ L + L+ A LF E+ K D + + L+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 384 LCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
C R DG LL M + ++ L EA +L K M+++ +
Sbjct: 308 FCNAGRWDDGAKLLRDM--IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 444 LRPPYQDSAIDIL----RKSEEKDLVDLV 468
+S ID R E +VDL+
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 109/248 (43%), Gaps = 5/248 (2%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
QM+ DL+ S + ++T N+ + CK ++ D L + R+M G +TV YN +
Sbjct: 389 QMV-DLMISKGCDPDIMTFNIL--INGYCKANRIDD-GLELFREMSLRGVIANTVTYNTL 444
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
++ C+ G +E+ +KL +EM PD+++Y +++GLC+ G E A + +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
++ + I G+C + G + + Y +I C + ++A
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG-VKLDARAYNIMISELCRKDSLSKAD 563
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLI 350
+ +M G + +T LI + A L++++ G +VI+++
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Query: 351 RIKRLEEA 358
L+++
Sbjct: 624 SSGELDKS 631
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 148/280 (52%), Gaps = 5/280 (1%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
V+T + E C+++ + A+ +L +M D G PD V YNV++ CK+G ++ K
Sbjct: 239 VITYTILIEAT--CRDSGVGH-AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
L +M S P++IT+ ++ +C+ GR DA LL DM G SP++V + + + LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
R G + G C+PN ++Y L+ FC+ + + A+ L+RM + GC +
Sbjct: 356 RKGLLGRAIDILEKMPQHG-CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS-YGDCYSSLVISLIRIKRLEEAEKLFRE 364
VT T++ +LC G VE+A ++++L G S Y++++ L + + +A KL E
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 365 LLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ A +LKPDT+ S L+ L + +V + E MG
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 149/303 (49%), Gaps = 8/303 (2%)
Query: 104 LGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPD 163
LG R I +++E A V+T N+ + CK ++ + AL VL +M PD
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVM--ISGYCKAGEINN-ALSVLDRMS---VSPD 203
Query: 164 TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLK 223
V YN ++R C G ++ ++L M D PD+ITY +IE C A LL
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 224 DMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER 283
+MR GC+P++V + + +G+C+ G SG C+PNV+T+ +++S C
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIILRSMCST 322
Query: 284 SQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CY 342
+W +A +L M G + VT LI+ LC KG + A +++K+ +HG Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
+ L+ + K+++ A + +++ PD + + +L LC +V D +L+ + +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 403 MGC 405
GC
Sbjct: 443 KGC 445
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 151/323 (46%), Gaps = 8/323 (2%)
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
L M G+ PD + +IR C+ G K+L + S A PD+ITY MI G C
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVV 271
AG +A S+L M V SP++V + I LC SG + DC P+V+
Sbjct: 185 AGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR-DCYPDVI 240
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
TYT LI++ C S A+ +LD MR GC + VT L++ +C +G ++EA + ++ +
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 332 VEHGVSYGDCYSSLVI-SLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
G ++++ S+ R +AEKL ++L P + ++L+ LC K +
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 391 LDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQD 450
+L+ M GC G C++ + A + + M+ + +
Sbjct: 361 GRAIDILEKMPQHGC--QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 451 SAIDIL-RKSEEKDLVDLVNQLT 472
+ + L + + +D V+++NQL+
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLS 441
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 5/243 (2%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
+ V N +R + G++E G K L M PD+I T+I G C G+ A +L
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+ + G P+++ + + G C++G S P+VVTY ++++S C+
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCD 216
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DC 341
+ +A+ VLDRM C + +T LI++ C V A +L+D++ + G +
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 342 YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
Y+ LV + + RL+EA K ++ + +P+ + +++L+ +C R +D LL M
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 402 NMG 404
G
Sbjct: 337 RKG 339
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 5/241 (2%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
VVT N+ + LC++ L A+ +L KM G +P+++ YN ++ CK+ ++ +
Sbjct: 344 VVTFNIL--INFLCRKGLLGR-AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
L M PD++TY TM+ LC G+ EDA +L + GCSP L+ + + DGL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
++G ++ D +P+ +TY+SL+ + +EA+ G N
Sbjct: 461 KAGK-TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRE 364
VT +++ LC + A + ++ G + Y+ L+ L +EA +L E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 365 L 365
L
Sbjct: 580 L 580
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 3/183 (1%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
+ +E + GC + + +L LCK+ ++ D A+ +L ++ G P + YN VI
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVED-AVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
K G KLL EM D PD ITY +++ GL G+ ++A + G PN
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
V ++I GLC+S G C+PN +YT LI+ EAL +L
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRG-CKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 294 DRM 296
+ +
Sbjct: 578 NEL 580
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 132 FREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM 190
+ VLK +CK Q A +A+ +LRKME+ + D V Y+++I CK G ++ L EM
Sbjct: 215 YGPVLKVMCKSGQTA-LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 191 SLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSX 250
+ D+I Y T+I G C AGR +D LL+DM +P++V SA+ D + G
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 251 XXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT 310
+ G P+ VTYTSLI FC+ +Q ++A ++LD M + GC N T
Sbjct: 334 REAEELHKEMIQRG-ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGE 369
LI+ C +++ L K+ GV Y++L+ + +LE A++LF+E+++
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 370 LKPDTLASSLLLKELC 385
++PD ++ +LL LC
Sbjct: 453 VRPDIVSYKILLDGLC 468
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 154/348 (44%), Gaps = 4/348 (1%)
Query: 97 YRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKME 156
+ + S++ + ++ DL + E +G + ++ C + +A + K+
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 157 DFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPE 216
G PDTV ++ +I C +G V +L+ M P LIT ++ GLC G+
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 217 DAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
DA L+ M G PN V + +C+SG + + + V Y+ +
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER-KIKLDAVKYSII 253
Query: 277 IQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
I C+ + A N+ + M G A+ + TLI C G ++ +L+ +++ +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 337 SYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFY 395
+ +S+L+ ++ +L EAE+L +E++ + PDT+ + L+ C ++++ +
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 396 LLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
+LD M + GC G C+ N + + +L + M + V+
Sbjct: 374 MLDLMVSKGC--GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CKE QL D A +L M G P+ +N++I CK ++ G +L R+MSL
Sbjct: 362 FCKENQL-DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D +TY T+I+G C G+ E A L ++M P++V + DGLC +G
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
KS ++ Y +I C S+ ++A ++ + G + T +I LC
Sbjct: 481 EKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVI 347
KG + EA L K+ E G S C +++I
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
++GC + F ++ +A L D L + RKM G DTV YN +I+ C+ G +E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
+ ++L +EM PD+++Y +++GLC+ G PE A + + + ++ + + I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
G+C + G +P+V TY +I C++ +EA + +M G
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKG-VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 302 LANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEA 358
N T LI + +G ++ +L++++ G S +V+ ++ RL+++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKS 615
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 2/256 (0%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A+ + ++M RP + ++ + + + ++ L ++M L +L T M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I C + A+S + + G P+ V S + +GLC G + G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
+P ++T +L+ C + ++A+ ++DRM G N VT ++ +C G A
Sbjct: 174 -KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 326 RLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
L+ K+ E + YS ++ L + L+ A LF E+ K D + + L++
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 385 CMKDRVLDGFYLLDAM 400
C R DG LL M
Sbjct: 293 CYAGRWDDGAKLLRDM 308
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 155/334 (46%), Gaps = 39/334 (11%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
DVAL + KME G P+ V YN +I CK ++ G KLLR M+L P+LI+Y +
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I GLC GR ++ +L +M G S + V + + G C+ G+ + G
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG- 340
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
P+V+TYTSLI S C+ N A+ LD+MR G N T TL+D KG + EAY
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 326 RLVDKLVEHG-----VSY-----GDC--------------------------YSSLVISL 349
R++ ++ ++G V+Y G C YS+++
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 350 IRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXX 409
R ++EA ++ RE++ +KPDT+ S L++ C + R + L + M +G
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL--PP 518
Query: 410 XXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
C + L +A +L M++K VL
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 53/318 (16%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
+CK + + A+ L +M G P+ Y ++ +KG + ++LREM+ + P
Sbjct: 355 MCKAGNM-NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
++TY +I G C G+ EDA ++L+DM+ G SP++V S + G CRS
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G +P+ +TY+SLIQ FCE+ + EA ++ + M G + T LI++ C
Sbjct: 474 REMVEKG-IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 318 KGCVEEAYRLVDKLVEHGV-----SYGDCYSSL--------------------------- 345
+G +E+A +L +++VE GV +Y + L
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 346 ---------------VISLIR----IKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
V+SLI+ + EA+++F +L KPD A ++++ C
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 387 KDRVLDGFYLLDAMENMG 404
+ + L M G
Sbjct: 653 AGDIRKAYTLYKEMVKSG 670
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 42/364 (11%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L E+Y+ C T ++F V+K L D AL ++ + G P + YN V+
Sbjct: 123 LQETYDL--CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI 180
Query: 176 K-KGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
+ K ++ E + +EM S P++ TY +I G C AG + A +L M GC PN+
Sbjct: 181 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240
Query: 235 VVLSAIFD-----------------------------------GLCRSGSXXXXXXXXXX 259
V + + D GLCR G
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
+ G + VTY +LI+ +C+ +++AL + M G + +T +LI S+C G
Sbjct: 301 MNRRG-YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 320 CVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
+ A +D++ G+ + Y++LV + + EA ++ RE+ P + +
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 379 LLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIML 438
L+ C+ ++ D +L+ M+ G G C+ + EA ++ + M+
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGL--SPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 439 KKSV 442
+K +
Sbjct: 478 EKGI 481
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 19/221 (8%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D AL V R+M + G +PDT+ Y+ +I+ C++ + L EM PD TY +
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I C G E A L +M G P++V S + +GL + S +
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ-SRTREAKRLLLKLFYEE 585
Query: 266 CRPNVVTY---------------TSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT 310
P+ VTY SLI+ FC + EA V + M +
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIR 351
+I C G + +AY L ++V+ G ++ VI+L++
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFL---LHTVTVIALVK 683
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 150/324 (46%), Gaps = 35/324 (10%)
Query: 116 LIESYEAEGCVVTVN-----------------MFREVLKL--CKEAQL------------ 144
L++S+E EGC + VN +F E L+ C + +
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 145 -ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC-PDLITY 202
A+ AL +L M FG PD V YN +I+ CK ++ ++ +++ C PD++TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 203 ITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK 262
+MI G C AG+ +A SLL DM G P V + + DG ++G
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVE 322
G C P+VVT+TSLI +C Q ++ + + M A G N T LI++LC++ +
Sbjct: 341 FG-CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 323 EAYRLVDKLVEHGV-SYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+A L+ +L + Y+ ++ + ++ EA + E+ + KPD + ++L+
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 382 KELCMKDRVLDGFYLLDAMENMGC 405
CMK R+ + + M +GC
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGC 483
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 7/368 (1%)
Query: 75 QLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFRE 134
+G RF+ ++ F+ RHS + Y + L + + E +++G +
Sbjct: 84 HIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGF 143
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
++ E A +L ++ F ++ N ++ K VE KL E
Sbjct: 144 LVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQ 201
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
+C D T+ +I GLC G+ E A LL M GC P++V + + G C+S
Sbjct: 202 SCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKAS 261
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
C P+VVTYTS+I +C+ + EA ++LD M G +VT L+D
Sbjct: 262 EMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKP 372
G + A + K++ G + D ++SL+ R+ ++ + +L+ E+ A + P
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGC-FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 373 DTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATK 432
+ S+L+ LC ++R+L LL + + G C+ + EA
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKD--IIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 433 LAKIMLKK 440
+ + M KK
Sbjct: 439 IVEEMEKK 446
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 104/246 (42%), Gaps = 27/246 (10%)
Query: 88 SGYRHSAYMYRKASSLL------GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKE 141
SGY + M R+ASSLL GI L++ Y G ++T R
Sbjct: 285 SGYCKAGKM-REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG------- 336
Query: 142 AQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLIT 201
KM FG PD V + +I C+ G V G +L EM+ P+ T
Sbjct: 337 ------------KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 202 YITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXX 261
Y +I LCN R A LL + P + + + DG C++G
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 262 KSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCV 321
K C+P+ +T+T LI C + + EA+++ +M A GC + +T +L+ L G
Sbjct: 445 KK-KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 322 EEAYRL 327
+EAY L
Sbjct: 504 KEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 150/324 (46%), Gaps = 35/324 (10%)
Query: 116 LIESYEAEGCVVTVN-----------------MFREVLKL--CKEAQL------------ 144
L++S+E EGC + VN +F E L+ C + +
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 145 -ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC-PDLITY 202
A+ AL +L M FG PD V YN +I+ CK ++ ++ +++ C PD++TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 203 ITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK 262
+MI G C AG+ +A SLL DM G P V + + DG ++G
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVE 322
G C P+VVT+TSLI +C Q ++ + + M A G N T LI++LC++ +
Sbjct: 341 FG-CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 323 EAYRLVDKLVEHGV-SYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+A L+ +L + Y+ ++ + ++ EA + E+ + KPD + ++L+
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 382 KELCMKDRVLDGFYLLDAMENMGC 405
CMK R+ + + M +GC
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGC 483
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 7/368 (1%)
Query: 75 QLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFRE 134
+G RF+ ++ F+ RHS + Y + L + + E +++G +
Sbjct: 84 HIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGF 143
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
++ E A +L ++ F ++ N ++ K VE KL E
Sbjct: 144 LVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQ 201
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
+C D T+ +I GLC G+ E A LL M GC P++V + + G C+S
Sbjct: 202 SCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKAS 261
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
C P+VVTYTS+I +C+ + EA ++LD M G +VT L+D
Sbjct: 262 EMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKP 372
G + A + K++ G + D ++SL+ R+ ++ + +L+ E+ A + P
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGC-FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 373 DTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATK 432
+ S+L+ LC ++R+L LL + + G C+ + EA
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKD--IIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 433 LAKIMLKK 440
+ + M KK
Sbjct: 439 IVEEMEKK 446
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 104/246 (42%), Gaps = 27/246 (10%)
Query: 88 SGYRHSAYMYRKASSLL------GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKE 141
SGY + M R+ASSLL GI L++ Y G ++T R
Sbjct: 285 SGYCKAGKM-REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG------- 336
Query: 142 AQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLIT 201
KM FG PD V + +I C+ G V G +L EM+ P+ T
Sbjct: 337 ------------KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 202 YITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXX 261
Y +I LCN R A LL + P + + + DG C++G
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 262 KSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCV 321
K C+P+ +T+T LI C + + EA+++ +M A GC + +T +L+ L G
Sbjct: 445 KK-KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 322 EEAYRL 327
+EAY L
Sbjct: 504 KEAYHL 509
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 5/307 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ +QL+ +AL VL KM G PD V N ++ C + L+ +M P
Sbjct: 126 FCRRSQLS-LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D T+ T+I GL R +A +L+ M V GC P+LV + +GLC+ G
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD-IDLALSL 243
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G P VV Y ++I + C N+ALN+ M G N VT +LI LC+
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 318 KGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G +A RL+ ++E ++ +S+L+ + ++ +L EAEKL+ E++ + PD
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
S L+ CM DR+ + ++ + M + C G C+ + E +L +
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 437 MLKKSVL 443
M ++ ++
Sbjct: 422 MSQRGLV 428
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
Query: 87 QSGYRHSAYMYRK-ASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQL 144
+ GY+ ++ + L +R + + L++ +GC + + V+ LCK +
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVA-LVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
D+AL +L+KME P V+YN +I C +V L EM P+++TY +
Sbjct: 238 -DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+I LCN GR DA LL DM +PN+V SA+ D + G K
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
P++ TY+SLI FC + +EA ++ + M + C N VT TLI C V+E
Sbjct: 357 -IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 325 YRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
L ++ + G V Y++L+ + + + A+ +F+++++ + PD + S+LL
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 384 LCMKDRV 390
LC +V
Sbjct: 476 LCNNGKV 482
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 4/236 (1%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P+ V YN +I+ CK V+ G +L REMS + +TY T+I G A ++A +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
K M G P+++ S + DGLC +G +S P++ TY +I+ C
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMC 512
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGD 340
+ + + ++ + G N VT T++ C KG EEA L ++ E G +
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYL 396
Y++L+ + +R + +L RE+ + D AS++ L + D LD +L
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGD--ASTIGLVTNMLHDGRLDKSFL 626
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 108 RNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVM 166
+N +L + +G V + +++ LC + +D A +L M + P+ V
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD-ASRLLSDMIERKINPNVVT 328
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
++ +I K+G + EKL EM PD+ TY ++I G C R ++A + + M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
C PN+V + + G C++ + G N VTYT+LI F + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG-LVGNTVTYTTLIHGFFQAREC 447
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSL 345
+ A V +M + G L + +T L+D LC+ G VE A + + L + Y+ +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 346 VISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
+ + + ++E+ LF L +KP+ + + ++ C K
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 1/191 (0%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
++ C V + ++K +A+ D + + R+M G +TV Y +I + + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
+ + ++M PD++TY +++GLCN G+ E A + + ++ P++ + +
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
+G+C++G G +PNVVTYT+++ FC + EA + M+ G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 302 LANHVTAFTLI 312
L + T TLI
Sbjct: 568 LPDSGTYNTLI 578
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+L G V + ++ +A+ D A V ++M G PD + Y++++
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
C G VE + + S PD+ TY MIEG+C AG+ ED + L + + G PN+
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
V + + G CR G + G P+ TY +LI++ + ++
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 295 RMRA 298
MR+
Sbjct: 596 EMRS 599
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 171/381 (44%), Gaps = 52/381 (13%)
Query: 75 QLGVRFFIWAGFQSGYRHS-------------AYMYRKASSLLGIDRNPQMICDLIESYE 121
+L +FF W+ ++G++HS A MY A+S+L + CD+ +
Sbjct: 123 KLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLW 182
Query: 122 A--EGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDF--------------------- 158
+ CV +F + + + + + A+ KM+ F
Sbjct: 183 STRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGK 242
Query: 159 --------------GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
G+RP YN++I CK+GDVE L EM PD +TY +
Sbjct: 243 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNS 302
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
MI+G GR +D ++M+ C P+++ +A+ + C+ G +G
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
+PNVV+Y++L+ +FC+ +A+ MR G + N T +LID+ C G + +A
Sbjct: 363 -LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 325 YRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
+RL +++++ GV + Y++L+ L +R++EAE+LF ++ + P+ + + L+
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 384 LCMKDRVLDGFYLLDAMENMG 404
+ LL+ ++ G
Sbjct: 482 FVKAKNMDRALELLNELKGRG 502
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 137/317 (43%), Gaps = 2/317 (0%)
Query: 88 SGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADV 147
+G R + + Y + + + + L E + G V + ++ + D
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 315
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
+ +M+D PD + YN +I CK G + +G + REM + P++++Y T+++
Sbjct: 316 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
C G + A DMR G PN +++ D C+ G+ + G
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG-VE 434
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
NVVTYT+LI C+ + EA + +M G + N + LI ++ A L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 328 VDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+++L G+ Y + + L ++++E A+ + E+ +K ++L + L+
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 387 KDRVLDGFYLLDAMENM 403
+G +LLD M+ +
Sbjct: 555 SGNPTEGLHLLDEMKEL 571
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 118/270 (43%), Gaps = 1/270 (0%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+L + G + + + ++ +A+ D AL +L +++ G +PD ++Y I
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
C +E + ++ EM + + Y T+++ +G P + LL +M+ +
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 577
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
V + DGLC++ + N +T++I C+ +Q A + +
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIK 353
+M G + + +L+D +G V EA L DK+ E G+ Y+SLV L
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 697
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKE 383
+L++A E++ + PD + +LK+
Sbjct: 698 QLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 37/231 (16%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITY-------- 202
V+ +M++ G + ++++Y ++ K G+ G LL EM D ++T+
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 203 ----------------------------ITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
MI+GLC + E A +L + M G P+
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+++ DG + G+ + G + +++ YTSL+ +Q +A + L+
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIG-MKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSL 345
M G + V +++ + GC++EA L L++H + D ++L
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNAL 758
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 4/272 (1%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
LI+ GC + VL +CK Q A +A+ +LRKME+ + D V Y+++I
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA-LAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
CK G ++ L EM + ++ITY +I G CNAGR +D LL+DM +PN+
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
V S + D + G G P+ +TYTSLI FC+ + ++A ++D
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIK 353
M + GC N T LI+ C +++ L K+ GV Y++L+ +
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
+L A++LF+E+++ ++ P+ + +LL LC
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 184/426 (43%), Gaps = 42/426 (9%)
Query: 53 IKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQS-GYRHSAYMYRKASSLLGI--DRN 109
++P+L +++ CP + + F GF + R+ +Y R S L+ I D
Sbjct: 17 VQPRLLETGTLRIALINCPNE----LSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDA 72
Query: 110 PQMICDLIESYEAEGCVVTVNMFRE---------VLKLCKEAQLADVA--LWVLR----- 153
+ D+I S + +F VL LCK+ +L +A L+ L
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINC 132
Query: 154 ---------------KMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
K+ G P+T+ ++ +I C +G V +L+ M PD
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 192
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
LIT T++ GLC +G+ +A L+ M +GC PN V + + +C+SG
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 252
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
+ + + + V Y+ +I C+ + A N+ + M G N +T LI C+
Sbjct: 253 KMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 319 GCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
G ++ +L+ +++ ++ +S L+ S ++ +L EAE+L +E++ + PDT+
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIM 437
+ L+ C ++ + ++D M + GC G C+ N + + +L + M
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGC--DPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 438 LKKSVL 443
+ V+
Sbjct: 430 SLRGVV 435
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 132/261 (50%), Gaps = 5/261 (1%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
++T+N V LC + A+ A+ ++ KM ++G +P+ V Y V+ + CK G + +
Sbjct: 193 LITINTL--VNGLCLSGKEAE-AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
LLR+M + D + Y +I+GLC G ++A++L +M + G + N++ + + G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
+G K PNVVT++ LI SF + + EA + M G +
Sbjct: 310 NAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRE 364
+T +LID C + +++A ++VD +V G ++ L+ + R+++ +LFR+
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 365 LLAGELKPDTLASSLLLKELC 385
+ + DT+ + L++ C
Sbjct: 429 MSLRGVVADTVTYNTLIQGFC 449
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 3/229 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CKE L D A ++ M G P+ +N++I CK ++ G +L R+MSL
Sbjct: 378 FCKENHL-DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D +TY T+I+G C G+ A L ++M PN+V + DGLC +G
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
KS ++ Y +I C S+ ++A ++ + G T +I LC
Sbjct: 497 EKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Query: 318 KGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFREL 365
KG + EA L K+ E G G Y+ L+ + + ++ KL EL
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTV 165
+D+ QM+ DL+ S +GC + F ++ +A D L + RKM G DTV
Sbjct: 384 LDKANQMV-DLMVS---KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 166 MYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDM 225
YN +I+ C+ G + + ++L +EM P+++TY +++GLC+ G E A + + +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 226 RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQ 285
++ + + I G+C + G +P V TY +I C++
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG-VKPGVKTYNIMIGGLCKKGP 558
Query: 286 WNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSL 345
+EA + +M G + T LI + G ++ +L+++L G S +
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Query: 346 VISLIRIKRLEEA 358
VI ++ RL+++
Sbjct: 619 VIDMLSDGRLKKS 631
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 173/390 (44%), Gaps = 8/390 (2%)
Query: 62 VIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYE 121
+I+V+SRC LG RFF+WA Q GY HS + + +L R + LIE
Sbjct: 100 IIRVLSRC-GDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMR 158
Query: 122 AEGC-VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
++ +F +++ A + A+ VL +M +G PD ++ ++ CK G V
Sbjct: 159 KTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSV 218
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
+ K+ +M P+L + +++ G C G+ +A +L M+ G P++VV + +
Sbjct: 219 KEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE-RSQWNEALNVLDRMRAF 299
G +G K G PNV YT LIQ+ C + +EA+ V M +
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKRG-FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 300 GCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEA 358
GC A+ VT LI C G +++ Y ++D + + GV Y ++++ + ++ EE
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 359 EKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXX 418
+L ++ PD L +++++ C V + L + ME G
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL--SPGVDTFVIMI 454
Query: 419 XGLCQKNHLAEATKLAKIMLKKSVLLRPPY 448
G + L EA K M+ + + P Y
Sbjct: 455 NGFTSQGFLIEACNHFKEMVSRGIFSAPQY 484
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEG 208
L ++ KM+ G PD ++YNVVIRL CK G+V+ +L EM + P + T++ MI G
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMING 456
Query: 209 LCNAGRPEDAYSLLKDMRVHG--CSPNLVVLSAIFDGLCRSGSXXXXXXXXX-XXXKSGD 265
+ G +A + K+M G +P L ++ + L R K+
Sbjct: 457 FTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSS 516
Query: 266 CRPNVVTYTSLIQSFCERSQWNEA 289
C NV +T I + + EA
Sbjct: 517 CELNVSAWTIWIHALYAKGHVKEA 540
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 143/308 (46%), Gaps = 5/308 (1%)
Query: 137 KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC 196
K CKE ++D A V ++ +P V +N +I CK G+++ G +L +M S
Sbjct: 249 KFCKEGNISD-AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR 307
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
PD+ TY +I LC + + A+ L +M G PN V+ + + G R+G
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
G +P++V Y +L+ FC+ A N++D M G + +T TLID C
Sbjct: 368 YQKMLSKG-LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
G VE A + ++ ++G+ +S+LV + + R+ +AE+ RE+L +KPD +
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAK 435
++++ C K GF LL M++ G GLC+ + A L
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDG--HVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 436 IMLKKSVL 443
ML V+
Sbjct: 545 AMLNIGVV 552
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 100/195 (51%), Gaps = 2/195 (1%)
Query: 153 RKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA 212
+KM G +PD V+YN ++ CK GD+ ++ M PD ITY T+I+G C
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 213 GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVT 272
G E A + K+M +G + V SA+ G+C+ G ++G +P+ VT
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG-IKPDDVT 487
Query: 273 YTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV 332
YT ++ +FC++ +L M++ G + + VT L++ LC G ++ A L+D ++
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 333 EHGVSYGD-CYSSLV 346
GV D Y++L+
Sbjct: 548 NIGVVPDDITYNTLL 562
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 105 GIDRNPQMICDLI-ESYE---AEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFG 159
G RN ++ DL+ ESY+ ++G + ++ ++ CK L A ++ M G
Sbjct: 354 GHSRNGEI--DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV-AARNIVDGMIRRG 410
Query: 160 SRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAY 219
RPD + Y +I C+ GDVE ++ +EM + D + + ++ G+C GR DA
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 220 SLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQS 279
L++M G P+ V + + D C+ G G P+VVTY L+
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNG 529
Query: 280 FCERSQWNEALNVLDRMRAFGCLANHVTAFTLID 313
C+ Q A +LD M G + + +T TL++
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
+CKE ++ D A LR+M G +PD V Y +++ CKKGD + G KLL+EM P
Sbjct: 460 MCKEGRVID-AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGS 249
++TY ++ GLC G+ ++A LL M G P+ + + + +G R +
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 16/300 (5%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
+G + + + +VL A ++A + +M+ G D Y +++ CK G +E
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
K EM P+++TY +I A + A L + M GC PN+V SA+
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDC---------------RPNVVTYTSLIQSFCERSQW 286
DG C++G S D RPNVVTY +L+ FC+ +
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSL 345
EA +LD M GC N + LID LC G ++EA + ++ EHG YSSL
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 346 VISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
+ ++KR + A K+ ++L P+ + + ++ LC + + + L+ ME GC
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 19/365 (5%)
Query: 50 LSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRN 109
L + + KL VI+V+ R + + + FF+WAG Q GY+H+A +Y L+ D +
Sbjct: 123 LRQFREKLSESLVIEVL-RLIARPSAV-ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDD 180
Query: 110 ---PQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVM 166
P+ I + E +N+ V K C+ + +AL L +++DF RP
Sbjct: 181 EKVPEEFLQQIRDDDKEVFGEFLNVL--VRKHCRNGSFS-IALEELGRLKDFRFRPSRST 237
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
YN +I+ K ++ + REMSL++ D T LC G+ +A +L++
Sbjct: 238 YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE--- 294
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
P+ V + + GLC + S ++ C PNVVTY++L+ + Q
Sbjct: 295 TENFVPDTVFYTKLISGLCEA-SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLV 346
VL+ M GC + +L+ + C G AY+L+ K+V+ G G +++
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 347 ISLI-------RIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDA 399
I I L+ AEK + E+LA + + + S + LC + F ++
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 400 MENMG 404
M G
Sbjct: 474 MIGQG 478
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 8/293 (2%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
L+++ EGC ++ ++ LCK +L D A V +M + G Y+ +I
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKL-DEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
K ++ K+L +M + P+++ Y MI+GLC G+ ++AY L++ M GC PN+
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
V +A+ DG G G PN VTY LI C+ + A N+L+
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKG-VAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS-YGDCYSSLVISLIRIK 353
M+ H + + +K + E+ L+D++ + + + Y L+ +LI+ +
Sbjct: 839 EMKQTH-WPTHTAGYRKVIEGFNKEFI-ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896
Query: 354 RLEEAEKLFREL--LAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
RLE A +L E+ + L + + L++ LC+ ++V F L M G
Sbjct: 897 RLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 6/283 (2%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
G T+ + ++ + + D+A VL KM + P+ V+Y +I CK G +
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
KL++ M P+++TY MI+G G+ E LL+ M G +PN V + D
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 823
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
C++G+ K + Y +I+ F ++ E+L +LD +
Sbjct: 824 CCKNGA-LDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAP 880
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG---VSYGDCYSSLVISLIRIKRLEEAEK 360
LID+L +E A RL++++ V Y Y+SL+ SL ++E A +
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940
Query: 361 LFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENM 403
LF E+ + P+ + L+K L ++ + LLD + +M
Sbjct: 941 LFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 118/291 (40%), Gaps = 6/291 (2%)
Query: 121 EAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
E E V + +++ EA L + A+ L +M P+ V Y+ ++ C K +
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
+++L M + P + +++ C +G AY LLK M G P VV + +
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 241 FDGLCRSGSXXX-----XXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+C + N + +S + C ++ +A +V+
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 296 MRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKR 354
M G + + T +++ LC+ +E A+ L +++ G V+ Y+ +V S +
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 355 LEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
+E+A K F E+ P+ + + L+ +V L + M + GC
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 137/284 (48%), Gaps = 38/284 (13%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCKE ++ D A+ +L +M+ G P V+YNV+I CKKGD+ KL+ M L P
Sbjct: 232 LCKEERI-DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP 290
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV---------------------- 235
+ +TY T+I GLC G+ + A SLL+ M C PN V
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
Query: 236 -------------VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+ S + GL + G + G C+PN+V Y+ L+ C
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG-CKPNIVVYSVLVDGLCR 409
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-C 341
+ NEA +L+RM A GCL N T +L+ G EEA ++ ++ + G S C
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 342 YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
YS L+ L + R++EA ++ ++L +KPDT+A S ++K LC
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 180/395 (45%), Gaps = 43/395 (10%)
Query: 22 SSQKMGMASLADTLYSHLHQCNG------SVENSLSKIKPKLDSQCVIQVVSRCCPKQCQ 75
S+ KMG L D+ S + + SVE LS+I+ L+++ +I+
Sbjct: 66 SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIR--LENRVIIE----------- 112
Query: 76 LGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREV 135
R FI G H D+ + +++ + C +V F V
Sbjct: 113 ---RSFIVVFRAYGKAHLP------------DKAVDLFHRMVDEFR---CKRSVKSFNSV 154
Query: 136 LKLCKEAQLADVAL----WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
L + L L +V+ + P+ + +N+VI+ CK V+ ++ R M
Sbjct: 155 LNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP 214
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
PD TY T+++GLC R ++A LL +M+ GCSP+ V+ + + DGLC+ G
Sbjct: 215 ERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLT 274
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
G C PN VTY +LI C + + ++A+++L+RM + C+ N VT TL
Sbjct: 275 RVTKLVDNMFLKG-CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
I+ L + +A RL+ + E G YS L+ L + + EEA L+R++
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393
Query: 371 KPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
KP+ + S+L+ LC + + + +L+ M GC
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 42/330 (12%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
L++ ++EGC + ++ ++ LCK+ L V V M G P+ V YN +I
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLV-DNMFLKGCVPNEVTYNTLIHGL 302
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA---------------------- 212
C KG ++ LL M S P+ +TY T+I GL
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 213 -------------GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
G+ E+A SL + M GC PN+VV S + DGLCR G
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
SG C PN TY+SL++ F + EA+ V M GC N LID LC G
Sbjct: 423 MIASG-CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 320 CVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGE---LKPDTL 375
V+EA + K++ G+ YSS++ L I ++ A KL+ E+L E +PD +
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
++LL LCM+ + LL++M + GC
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGC 571
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 138/301 (45%), Gaps = 28/301 (9%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
L+ S E G + +++ ++ L KE + A+ A+ + RKM + G +P+ V+Y+V++
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGK-AEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
C++G +++L M S P+ TY ++++G G E+A + K+M GCS N
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
S + DGLC G G +P+ V Y+S+I+ C + AL +
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIG-IKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 295 RM---RAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV--------SYGDCYS 343
M + VT L+D LC + + A L++ +++ G ++ + S
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Query: 344 --------------SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
LV+ L++ +R+ A + +L L P T +++++E+C +
Sbjct: 587 EKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK 646
Query: 390 V 390
+
Sbjct: 647 I 647
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 159/381 (41%), Gaps = 40/381 (10%)
Query: 127 VTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKL 186
V+VN+ V CKE ++ D ++ G PD +N ++ CK G V+ ++
Sbjct: 260 VSVNVI--VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 187 LREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR 246
+ M PD+ TY ++I GLC G ++A +L M CSPN V + + LC+
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 247 SGSXXXXXXXXXXXXKSG----------------------------------DCRPNVVT 272
G C P+ T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 273 YTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV 332
Y LI S C + + +EALN+L +M GC + +T TLID C EA + D++
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 333 EHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVL 391
HGVS Y++L+ L + +R+E+A +L +++ KPD + LL C +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 392 DGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDS 451
++ AM + GC GLC+ + A+KL + + K + L P +
Sbjct: 558 KAADIVQAMTSNGC--EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Query: 452 AID-ILRKSEEKDLVDLVNQL 471
I + RK + + ++L ++
Sbjct: 616 VIQGLFRKRKTTEAINLFREM 636
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 122/241 (50%), Gaps = 3/241 (1%)
Query: 147 VALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
VA+ + +M G PD YN++I C KG ++ +L++M LS +ITY T+I
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
+G C A + +A + +M VHG S N V + + DGLC+S G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ- 536
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYR 326
+P+ TY SL+ FC +A +++ M + GC + VT TLI LC G VE A +
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 327 LVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELL-AGELKPDTLASSLLLKEL 384
L+ + G++ Y+ ++ L R ++ EA LFRE+L E PD ++ ++ + L
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Query: 385 C 385
C
Sbjct: 657 C 657
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 168/375 (44%), Gaps = 6/375 (1%)
Query: 69 CCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVT 128
C + + + F Q G+ Y + + L + + ++++ EG
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 129 VNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
V + V+ LCK ++ + A+ VL +M P+TV YN +I CK+ VE +L
Sbjct: 330 VYTYNSVISGLCKLGEVKE-AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
R ++ PD+ T+ ++I+GLC A L ++MR GC P+ + + D LC
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
G SG C +V+TY +LI FC+ ++ EA + D M G N VT
Sbjct: 449 GKLDEALNMLKQMELSG-CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELL 366
TLID LC VE+A +L+D+++ G Y+SL+ R +++A + + +
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNH 426
+ +PD + L+ LC RV LL +++ G GL +K
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI--NLTPHAYNPVIQGLFRKRK 625
Query: 427 LAEATKLAKIMLKKS 441
EA L + ML+++
Sbjct: 626 TTEAINLFREMLEQN 640
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 149/356 (41%), Gaps = 41/356 (11%)
Query: 154 KMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT--------- 204
KM +G +PD +NV+I+ C+ + +L +M PD T+ T
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 205 --------------------------MIEGLCNAGRPEDAYSLLKDMRVH-GCSPNLVVL 237
++ G C GR EDA + +++M G P+
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 238 SAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMR 297
+ + +GLC++G + G P+V TY S+I C+ + EA+ VLD+M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEG-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 298 AFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLE 356
C N VT TLI +LC + VEEA L L G+ C ++SL+ L +
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 357 EAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXX 416
A +LF E+ + +PD ++L+ LC K ++ + +L ME GC
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC--ARSVITYNT 475
Query: 417 XXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKSEE-KDLVDLVNQL 471
G C+ N EA ++ M V ++ ID L KS +D L++Q+
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 179/403 (44%), Gaps = 17/403 (4%)
Query: 9 FSPCLHKLKTLPFSSQKMGMASLADTLYSHLHQCNGSVENS-LSKIKPK---LDSQCVIQ 64
FS CL K PFS S A TL H N + +S +S P L S V
Sbjct: 3 FSSCL---KFYPFS------ISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKL 53
Query: 65 VVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEG 124
+ S +R F A + + +Y + LG + + ++E ++
Sbjct: 54 LDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSR 113
Query: 125 CVVTVNMFREVLKLCKEAQLADVALWVLRKM-EDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
C + + F +++ + +L D L V+ M ++FG +PDT YN ++ L +++
Sbjct: 114 CEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLV 173
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
E +MS+ PD+ T+ +I+ LC A + A +L+DM +G P+ + + G
Sbjct: 174 EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM-RAFGCL 302
G + G C + V+ ++ FC+ + +ALN + M G
Sbjct: 234 YIEEGDLDGALRIREQMVEFG-CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKL 361
+ T TL++ LC G V+ A ++D +++ G Y+S++ L ++ ++EA ++
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 362 FRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+++ + P+T+ + L+ LC +++V + L + + G
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 141/296 (47%), Gaps = 14/296 (4%)
Query: 92 HSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALW 150
H +++ KAS + LI+ A GC + + V+ LCK + D+AL
Sbjct: 193 HGLFLHNKASEAVA----------LIDRMVARGCQPDLFTYGTVVNGLCKRGDI-DLALS 241
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L+KME D V+Y +I C +V L EM P+++TY ++I LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
N GR DA LL DM +PN+V SA+ D + G K P++
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDI 360
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
TY+SLI FC + +EA ++ + M + C N VT TLI C VEE L +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 331 LVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
+ + G V Y++L+ L + + A+K+F+++++ + PD + S+LL LC
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 11/326 (3%)
Query: 119 SYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKG 178
SY+ + +N F C+ +QL +AL VL KM G PD V + ++ C
Sbjct: 112 SYDLYSYNILINCF------CRRSQLP-LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 164
Query: 179 DVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLS 238
+ L+ +M + + P+ +T+ T+I GL + +A +L+ M GC P+L
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 239 AIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRA 298
+ +GLC+ G K G +VV YT++I + C N+ALN+ M
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 299 FGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEE 357
G N VT +LI LC+ G +A RL+ ++E ++ +S+L+ + ++ +L E
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 358 AEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXX 417
AEKL+ E++ + PD S L+ CM DR+ + ++ + M + C
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTL 401
Query: 418 XXGLCQKNHLAEATKLAKIMLKKSVL 443
G C+ + E +L + M ++ ++
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLV 427
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 115/237 (48%), Gaps = 1/237 (0%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
++ C V + ++K +A+ + + + R+M G +TV YN +I+ + GD +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
M +K+ ++M PD+ITY +++GLC G+ E A + + ++ P++ + +
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
+G+C++G G +PNV+ YT++I FC + EA + M+ G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 302 LANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEA 358
L N T TLI + G + L+ ++ G S+VI+++ RLE++
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+L G V + +++ +A D+A + +KM G PD + Y++++
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
CK G +E + + S PD+ TY MIEG+C AG+ ED + L + + G PN+
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
++ + + G CR G + G PN TY +LI++ + ++
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
MR+ G + + T +I+ L D G +E++Y
Sbjct: 595 EMRSCGFVGDASTISMVINMLHD-GRLEKSY 624
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
PD Y+ +I C ++ + + M D P+++TY T+I+G C A R E+ L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
++M G N V + + GL ++G G P+++TY+ L+ C
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLC 476
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-D 340
+ + +AL V + ++ + T +I+ +C G VE+ + L L GV
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
Y++++ R EEA+ LFRE+ P++ + L++
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 146/312 (46%), Gaps = 14/312 (4%)
Query: 92 HSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALW 150
H +++ KAS + L++ GC + + V+ LCK + D+AL
Sbjct: 196 HGLFLHNKASEAVA----------LVDQMVQRGCQPDLVTYGTVVNGLCKRGDI-DLALS 244
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L+KME D V+YN +I CK ++ L EM PD+ TY ++I LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
N GR DA LL DM +PN+V SA+ D + G K P++
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDI 363
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
TY+SLI FC + +EA ++ + M + C N VT TLI C VEE L +
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 331 LVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
+ + G V Y++L+ + + + A+ +F+++++ + P+ L ++LL LC +
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 390 VLDGFYLLDAME 401
+ + + ++
Sbjct: 484 LAKAMVVFEYLQ 495
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 5/307 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ +QL+ +AL VL KM G PD V + ++ C + L+ +M P
Sbjct: 128 FCRRSQLS-LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D T+ T+I GL + +A +L+ M GC P+LV + +GLC+ G
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
K G +VV Y ++I C+ ++ALN+ M G + T +LI LC+
Sbjct: 247 KKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 318 KGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G +A RL+ ++E ++ +S+L+ + ++ +L EAEKL+ E++ + PD
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
S L+ CM DR+ + ++ + M + C G C+ + E +L +
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 437 MLKKSVL 443
M ++ ++
Sbjct: 424 MSQRGLV 430
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+L G V + ++ +A+ D A V ++M G P+ + YN+++
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
CK G + + + S PD+ TY MIEG+C AG+ ED + L ++ + G SPN+
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+ + + G CR GS + G PN TY +LI++ + ++
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIK 597
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
MR+ G A + L+ ++ G +++++
Sbjct: 598 EMRSCG-FAGDASTIGLVTNMLHDGRLDKSF 627
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
++ C V + ++K +A+ + + + R+M G +TV Y +I + D +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
+ + ++M P+++TY +++GLC G+ A + + ++ P++ + +
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
+G+C++G G PNV+ Y ++I FC + EA ++L +M+ G
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKG-VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 302 LANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEA 358
L N T TLI + G E + L+ ++ G + LV +++ RL+++
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 142/284 (50%), Gaps = 12/284 (4%)
Query: 120 YEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGD 179
YE + VVTV+ + C+ ++ D A+ ++ KME+ G RPD V+YN +I CK G
Sbjct: 135 YEPD--VVTVSSL--INGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 180 VEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSA 239
V +L M D +TY +++ GLC +GR DA L++DM + PN++ +A
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 240 IFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAF 299
+ D + G + P+V TY SLI C + +EA +LD M
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 300 GCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD--CYSSLVISLIRIKRLEE 357
GCL + VT TLI+ C V+E +L ++ + G+ GD Y++++ + R +
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL-VGDTITYNTIIQGYFQAGRPDA 367
Query: 358 AEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
A+++F + + +P+ S+LL LCM RV L + M+
Sbjct: 368 AQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 4/288 (1%)
Query: 97 YRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKM 155
+ K S + +N ++ L E G + + V+ LC+ ++ +AL V+ KM
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV-IALSVVGKM 130
Query: 156 EDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRP 215
FG PD V + +I C+ V L+ +M PD++ Y T+I+G C G
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 216 EDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTS 275
DA L M G + V +++ GLC SG D PNV+T+T+
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTA 249
Query: 276 LIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
+I F + +++EA+ + + M + T +LI+ LC G V+EA +++D +V G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 336 -VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
+ Y++L+ + KR++E KLFRE+ L DT+ + +++
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 4/283 (1%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P V ++ V+ K + ++ L M + DL +Y +I LC R A S+
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+ M G P++V +S++ +G C+ + G RP+VV Y ++I C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG-FRPDVVIYNTIIDGSC 185
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV-DKLVEHGVSYGD 340
+ N+A+ + DRM G A+ VT +L+ LC G +A RL+ D ++ V
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
+++++ ++ + EA KL+ E+ + PD + L+ LCM RV + +LD M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 401 ENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
GC G C+ + E TKL + M ++ ++
Sbjct: 306 VTKGC--LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 5/329 (1%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
DL+ E G V ++ ++ + L + A+ + +ME G R D V YN ++
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
C G +L+R+M + D P++IT+ +I+ G+ +A L ++M P++
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+++ +GLC G G C P+VVTY +LI FC+ + +E +
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKG-CLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKR 354
M G + + +T T+I G + A + ++ YS L+ L R
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--PNIRTYSILLYGLCMNWR 396
Query: 355 LEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXX 414
+E+A LF + E++ D ++++ +C V D + L ++ G
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG--LKPDVVSY 454
Query: 415 XXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
G C+K ++ L + M + +L
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL + M+ D YN+VI CK G+VE L R +S PD+++Y TMI
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSP 232
G C + + + L + M+ G P
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 145/313 (46%), Gaps = 16/313 (5%)
Query: 92 HSAYMYRKASSLLG-IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALW 150
H +++ KAS + +DR Q C + G VV LCK D+AL
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVN--------GLCKRGD-TDLALN 246
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L KME D V++N +I CK V+ L +EM P+++TY ++I LC
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
+ GR DA LL DM +PNLV +A+ D + G K P++
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS-IDPDI 365
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
TY SL+ FC + ++A + + M + C + VT TLI C VE+ L +
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 331 LVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKD 388
+ G+ GD Y++L+ L + A+K+F+++++ + PD + S+LL LC
Sbjct: 426 MSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 389 RVLDGFYLLDAME 401
++ + D M+
Sbjct: 485 KLEKALEVFDYMQ 497
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 5/307 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ +Q++ +AL +L KM G P V + ++ C + L+ +M P
Sbjct: 130 FCRRSQIS-LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D IT+ T+I GL + +A +L+ M GC PNLV + +GLC+ G
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-TDLALNL 247
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++ +VV + ++I S C+ ++ALN+ M G N VT +LI LC
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 318 KGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G +A +L+ ++E ++ +++L+ + ++ + EAEKL+ +++ + PD
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
+ L+ CM DR+ + + M + C G C+ + + T+L +
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDC--FPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 437 MLKKSVL 443
M + ++
Sbjct: 426 MSHRGLV 432
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 119/236 (50%), Gaps = 4/236 (1%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
PD V YN +I+ CK VE G +L REMS D +TY T+I+GL + G ++A +
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
K M G P+++ S + DGLC +G KS + + ++ YT++I+ C
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMC 516
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGD 340
+ + ++ ++ + G N VT T+I LC K ++EAY L+ K+ E G +
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYL 396
Y++L+ + +R + +L RE+ + D AS++ L + D LD +L
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGD--ASTIGLVANMLHDGRLDKSFL 630
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 7/208 (3%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDT 164
+D+ QM E ++ C V + ++K CK ++ D + R+M G DT
Sbjct: 381 LDKAKQMF----EFMVSKDCFPDVVTYNTLIKGFCKSKRVED-GTELFREMSHRGLVGDT 435
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
V Y +I+ GD + +K+ ++M PD++TY +++GLCN G+ E A +
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M+ ++ + + + +G+C++G G +PNVVTY ++I C +
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKR 554
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLI 312
EA +L +M+ G L N T TLI
Sbjct: 555 LLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A V ++M G PD + Y++++ C G +E ++ M S+ D+ Y TM
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
IEG+C AG+ +D + L + + G PN+V + + GLC S K
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC-SKRLLQEAYALLKKMKEDG 570
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRA 298
PN TY +LI++ + ++ MR+
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 5/176 (2%)
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
TY LI FC RSQ + AL +L +M G + VT +L++ C + +A LVD++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 332 VEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
VE G +++L+ L + EA L ++ +P+ + +++ LC +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 391 LDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRP 446
LL+ ME LC+ H+ +A L K M K + RP
Sbjct: 242 DLALNLLNKME--AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI--RP 293
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 127/249 (51%), Gaps = 3/249 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ +++D A+ ++ KM + G +PD V YN +I CK V +E+ P
Sbjct: 165 FCRRNRVSD-AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP 223
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+++TY ++ GLCN+ R DA LL DM +PN++ SA+ D ++G
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ P++VTY+SLI C + +EA + D M + GCLA+ V+ TLI+ C
Sbjct: 284 EEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 318 KGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
VE+ +L ++ + G VS Y++L+ + +++A++ F ++ + PD
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 377 SSLLLKELC 385
++LL LC
Sbjct: 403 YNILLGGLC 411
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 2/274 (0%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
F +L + + DV + + +KME G R D +N+VI C V + +L +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
PD +T +++ G C R DA SL+ M G P++V +AI D LC++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
+ G RPNVVTYT+L+ C S+W++A +L M N +T L
Sbjct: 208 DAFDFFKEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
+D+ G V EA L +++V + YSSL+ L R++EA ++F +++
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 371 KPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
D ++ + L+ C RV DG L M G
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 4/275 (1%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
D + E +G V + ++ LC ++ +D A +L M P+ + Y+ ++
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA-RLLSDMIKKKITPNVITYSALLDA 269
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
K G V ++L EM PD++TY ++I GLC R ++A + M GC +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
+V + + +G C++ + G N VTY +LIQ F + ++A
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRG-LVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRI 352
+M FG + T L+ LCD G +E+A + + + + + Y++++ + +
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
++EEA LF L LKPD + + ++ LC K
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 130/283 (45%), Gaps = 4/283 (1%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P V +N ++ K ++ L ++M + DL T+ +I C + A S+
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
L M G P+ V + ++ +G CR + G +P++V Y ++I S C
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYNAIIDSLC 201
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-D 340
+ + N+A + + G N VT L++ LC+ +A RL+ +++ ++
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
YS+L+ + ++ ++ EA++LF E++ + PD + S L+ LC+ DR+ + + D M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 401 ENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
+ GC G C+ + + KL + M ++ ++
Sbjct: 322 VSKGC--LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 1/183 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G D V YN +I CK VE G KL REMS + +TY T+I+G AG + A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
M G SP++ + + GLC +G K + ++VTYT++I+
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIR 443
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
C+ + EA ++ + G + VT T++ LC KG + E L K+ + G+
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Query: 339 GDC 341
DC
Sbjct: 504 NDC 506
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDT 164
ID QM DL+ S +GC+ V + ++ CK ++ D + + R+M G +T
Sbjct: 311 IDEANQMF-DLMVS---KGCLADVVSYNTLINGFCKAKRVED-GMKLFREMSQRGLVSNT 365
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
V YN +I+ + GDV+ ++ +M PD+ TY ++ GLC+ G E A + +D
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M+ ++V + + G+C++G G +P++VTYT+++ C +
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-LKPDIVTYTTMMSGLCTKG 484
Query: 285 QWNEALNVLDRMRAFGCLANHVT 307
+E + +M+ G + N T
Sbjct: 485 LLHEVEALYTKMKQEGLMKNDCT 507
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC +L + AL + M+ D V Y VIR CK G VE L +SL P
Sbjct: 410 LCDNGEL-EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLS 238
D++TY TM+ GLC G + +L M+ G N LS
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 159/339 (46%), Gaps = 15/339 (4%)
Query: 56 KLDSQCVIQVVSRCCPKQC---------QLGVRFFIWAGFQSGYRH-SAYMYRKASSLLG 105
++++ V V RC ++C + FF WA + Y H S + Y + L G
Sbjct: 103 QIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSG 162
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTV 165
R + LI+ ++ +++ F +++ A LA A+ +MED+G PD +
Sbjct: 163 KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 222
Query: 166 MYNVVIRLCCKKGDVEMGEKLLREMSLSDAC-PDLITYITMIEGLCNAGRPEDAYSLLKD 224
+++VI +K + SL D PD+I Y ++ G C AG +A + K+
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFD--SLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKE 280
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M++ G PN+ S + D LCR G SG C PN +T+ +L++ +
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG-CAPNAITFNNLMRVHVKAG 339
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSS 344
+ + L V ++M+ GC + +T LI++ C +E A ++++ +++ +
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN 399
Query: 345 LVISLIRIKR-LEEAEKLFRELLAGELKPDTLASSLLLK 382
+ I KR + A +++ +++ + +P+T+ ++L++
Sbjct: 400 TIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 107 DRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVM 166
D N + ++ + + C V + F + + ++ + + A + KM + P+TV
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVT 432
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
YN+++R+ +M K+ +EM + P++ TY ++ C G +AY L K+M
Sbjct: 433 YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV 492
Query: 227 VHGC-SPNLVVLSAIFDGLCRSG 248
C +P+L + + L R+G
Sbjct: 493 EEKCLTPSLSLYEMVLAQLRRAG 515
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 146/314 (46%), Gaps = 18/314 (5%)
Query: 92 HSAYMYRKASSLLG-IDRNPQMIC--DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVA 148
H +++ KAS + IDR Q C DL+ G VV LCK D+A
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLV----TYGAVVN--------GLCKRGD-TDLA 237
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEG 208
L +L KME + V+Y+ VI CK + L EM P++ITY ++I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 209 LCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRP 268
LCN GR DA LL DM +PNLV SA+ D + G K P
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR-SIDP 356
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
N+ TY+SLI FC + EA +L+ M CL N VT TLI+ C V++ L
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 329 DKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
++ + G V Y++L+ + + + A+ +F+++++ + P+ L ++LL LC
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 388 DRVLDGFYLLDAME 401
++ + + ++
Sbjct: 477 GKLAKAMVVFEYLQ 490
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 2/253 (0%)
Query: 154 KMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAG 213
KM G PD V N ++ C + L+ +M PD +T+ T+I GL
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
+ +A +L+ M GC P+LV A+ +GLC+ G ++ NVV Y
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD-TDLALNLLNKMEAAKIEANVVIY 256
Query: 274 TSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
+++I S C+ ++ALN+ M G N +T +LI LC+ G +A RL+ ++E
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 334 HGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLD 392
++ +S+L+ + ++ +L +AEKL+ E++ + P+ S L+ CM DR+ +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 393 GFYLLDAMENMGC 405
+L+ M C
Sbjct: 377 AKQMLELMIRKDC 389
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P+ V YN +I CK V+ G +L REMS + +TY T+I G A ++A +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
K M G PN++ + + DGLC++G +S P++ TY +I+ C
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMC 509
Query: 282 ERSQW 286
+ +W
Sbjct: 510 KAGKW 514
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 96/240 (40%), Gaps = 36/240 (15%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
+L E +G V + ++ LC + +D A +L M + P+ V ++ +I
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSD-ASRLLSDMIERKINPNLVTFSALIDA 332
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
KKG + EKL EM P++ TY ++I G C R +A +L+ M C PN
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 234 LVVLSAIFDGLCRS-------------------GSXXXXXXXXXXXXKSGDC-------- 266
+V + + +G C++ G+ ++ DC
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 267 -------RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
PN++TY L+ C+ + +A+ V + ++ + T +I+ +C G
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
+A+ D A V ++M G P+ + YN+++ CK G + + + S PD+
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 201 TYITMIEGLCNAGR 214
TY MIEG+C AG+
Sbjct: 500 TYNIMIEGMCKAGK 513
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 149/304 (49%), Gaps = 7/304 (2%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC- 196
+CKE + D A ++R +E G PD + YN+++R +G E GEKL+ +M S+ C
Sbjct: 273 MCKEG-MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM-FSEKCD 330
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
P+++TY +I LC G+ E+A +LLK M+ G +P+ + CR G
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
G C P++V Y +++ + C+ + ++AL + ++ GC N + T+ +L
Sbjct: 391 LETMISDG-CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
G A ++ +++ +G+ + Y+S++ L R ++EA +L ++ + E P +
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAK 435
+++L C R+ D +L++M GC G + AEA +LA
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA--GYRAEAMELAN 567
Query: 436 IMLK 439
+++
Sbjct: 568 DLVR 571
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 12/322 (3%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
++ C TV + +++ D AL ++ +M G +PD YN +IR CK+G V+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
+++R + L PD+I+Y ++ L N G+ E+ L+ M C PN+V S +
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
LCR G + G P+ +Y LI +FC + + A+ L+ M + GC
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 302 LANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-----VSYGDCYSSLVISLIRIKRLE 356
L + V T++ +LC G ++A + KL E G SY +S+L S +I+ L
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 357 EAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXX 416
+ E+++ + PD + + ++ LC + V + F LL M + C
Sbjct: 460 ----MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS--CEFHPSVVTYNI 513
Query: 417 XXXGLCQKNHLAEATKLAKIML 438
G C+ + + +A + + M+
Sbjct: 514 VLLGFCKAHRIEDAINVLESMV 535
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 7/271 (2%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC- 196
CK ++ D A VL +M PDTV YN++I C +G +++ K+L ++ LSD C
Sbjct: 168 FCKMNRIDD-ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL-LSDNCQ 225
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
P +ITY +IE G ++A L+ +M G P++ + I G+C+ G
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
G C P+V++Y L+++ + +W E ++ +M + C N VT LI +LC
Sbjct: 286 VRNLELKG-CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGDCYS--SLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
G +EEA L+ + E G++ D YS L+ + R RL+ A + +++ PD
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLT-PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 375 LASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
+ + +L LC + + + +GC
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
+ C+E +L DVA+ L M G PD V YN V+ CK G + ++ ++
Sbjct: 375 IAAFCREGRL-DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
P+ +Y TM L ++G A ++ +M +G P+ + +++ LCR G
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG-MVDEA 492
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
+S + P+VVTY ++ FC+ + +A+NVL+ M GC N T LI+
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 315 LCDKGCVEEAYRLVDKLV 332
+ G EA L + LV
Sbjct: 553 IGFAGYRAEAMELANDLV 570
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 44/298 (14%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD--ACPDLITYITM 205
+L +L M G PD ++ +I+ ++ K +R M + + PD+ Y +
Sbjct: 108 SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIP---KAVRVMEILEKFGQPDVFAYNAL 164
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I G C R +DA +L MR SP+ V + + LC G S +
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL-SDN 223
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
C+P V+TYT LI++ +EAL ++D M + G + T T+I +C +G V+ A+
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 326 RLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
+V L G Y+ L+ +L+ + EE EKL ++ + + P+ + S+L+ L
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 385 CMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
C ++ EA L K+M +K +
Sbjct: 344 CRDGKI-------------------------------------EEAMNLLKLMKEKGL 364
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVL-KLCKEAQLA 145
+ G AY Y + + + + +E+ ++GC+ + + VL LCK + A
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK-A 419
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D AL + K+ + G P++ YN + GD ++ EM + PD ITY +M
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I LC G ++A+ LL DMR P++V + + G C++ +G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG- 538
Query: 266 CRPNVVTYTSLIQSF---CERSQWNEALNVLDRMRA 298
CRPN TYT LI+ R++ E N L R+ A
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA 574
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 46/206 (22%)
Query: 240 IFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYT------------------------- 274
IF CRSG+ + G P+V+ T
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 275 ---------SLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
+LI FC+ ++ ++A VLDRMR+ + VT +I SLC +G ++ A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 326 RLVDKLVEHGVSYGDCYSSLVISLIRIKR------LEEAEKLFRELLAGELKPDTLASSL 379
+++++L+ +C +++ I I+ ++EA KL E+L+ LKPD +
Sbjct: 214 KVLNQLLSD-----NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 380 LLKELCMKDRVLDGFYLLDAMENMGC 405
+++ +C + V F ++ +E GC
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGC 294
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 146/318 (45%), Gaps = 6/318 (1%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
V+ V F ++K C EA + + +L ++ +FG P+ V+Y +I CCKKG++E +
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
L EM + TY +I GL G + + + + M+ G PNL + + + LC
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 246 RSGSXXXXXXXXXXXXKSG-DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLAN 304
+ G + G C N+VTY +LI C + NEA V+D+M++ G N
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 305 HVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFR 363
+T TLID C G + +A L L G+S Y+ LV R A K+ +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 364 ELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQ 423
E+ +KP + ++L+ D + L +ME +G G C
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL--VPDVHTYSVLIHGFCI 455
Query: 424 KNHLAEATKLAKIMLKKS 441
K + EA++L K M++K+
Sbjct: 456 KGQMNEASRLFKSMVEKN 473
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 39/303 (12%)
Query: 115 DLIESYEAEGCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
++ E + +G + + V+ +LCK+ + D A V +M + G + V YN +I
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD-AFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
C++ + K++ +M P+LITY T+I+G C G+ A SL +D++ G SP+
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
LV + + G CR G + G +P+ VTYT LI +F +A+ +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERG-IKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE-------------------H 334
M G + + T LI C KG + EA RL +VE
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 335 GVSYGD-----------------CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
G SY Y ++ L + ++ +EAE+L +++ + P T
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSIL 551
Query: 378 SLL 380
SL+
Sbjct: 552 SLI 554
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 65 VVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEG 124
+VS C K G + + G + S Y N + L S E G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 125 CVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
V V+ + ++ C + Q+ + A + + M + P+ V+YN +I CK+G
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNE-ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
KLL+EM + P++ +Y MIE LC + ++A L++ M G P+ +LS I
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 144/313 (46%), Gaps = 16/313 (5%)
Query: 92 HSAYMYRKASSLLG-IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALW 150
H +++ KAS + +DR Q C + G VV LCK + D+A
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVN--------GLCKRGDI-DLAFN 171
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L KME D V++N +I CK V+ L +EM P+++TY ++I LC
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
+ GR DA LL DM +PNLV +A+ D + G K P++
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS-IDPDI 290
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
TY SLI FC + ++A + + M + C + T TLI C VE+ L +
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 331 LVEHGVSYGDC--YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKD 388
+ G+ GD Y++L+ L + A+K+F+++++ + PD + S+LL LC
Sbjct: 351 MSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 389 RVLDGFYLLDAME 401
++ + D M+
Sbjct: 410 KLEKALEVFDYMQ 422
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 5/301 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ +Q++ +AL +L KM G P V + ++ C + L+ +M P
Sbjct: 55 FCRRSQIS-LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 113
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D IT+ T+I GL + +A +L+ M GC PNLV + +GLC+ G
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-IDLAFNL 172
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++ +VV + ++I S C+ ++ALN+ M G N VT +LI LC
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 318 KGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G +A +L+ ++E ++ +++L+ + ++ + EAEKL +++ + PD
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
+ L+ CM DR+ + + M + C G C+ + + T+L +
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDC--FPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 437 M 437
M
Sbjct: 351 M 351
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 4/236 (1%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
PD YN +I+ CK VE G +L REMS D +TY T+I+GL + G ++A +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
K M G P+++ S + DGLC +G KS + + ++ YT++I+ C
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMC 441
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGD 340
+ + ++ ++ + G N VT T+I LC K ++EAY L+ K+ E G +
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYL 396
Y++L+ + +R + +L RE+ + D AS++ L + D LD +L
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGD--ASTIGLVANMLHDGRLDKSFL 555
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 7/208 (3%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDT 164
+D+ QM E ++ C ++ + ++K CK ++ D + R+M G DT
Sbjct: 306 LDKAKQMF----EFMVSKDCFPDLDTYNTLIKGFCKSKRVED-GTELFREMSHRGLVGDT 360
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
V Y +I+ GD + +K+ ++M PD++TY +++GLCN G+ E A +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M+ ++ + + + +G+C++G G +PNVVTY ++I C +
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKR 479
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLI 312
EA +L +M+ G L + T TLI
Sbjct: 480 LLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 12/276 (4%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSR---PDTVMY 167
Q++ D+IE + +VT N + KE + + + +D R PD Y
Sbjct: 241 QLLSDMIEK-KINPNLVTFNALIDAF--VKEGKFVEAE----KLHDDMIKRSIDPDIFTY 293
Query: 168 NVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRV 227
N +I C ++ +++ M D PDL TY T+I+G C + R ED L ++M
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 228 HGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWN 287
G + V + + GL G G P+++TY+ L+ C +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLE 412
Query: 288 EALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLV 346
+AL V D M+ + T+I+ +C G V++ + L L GV Y++++
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 347 ISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
L + L+EA L +++ PD+ + L++
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A V ++M G PD + Y++++ C G +E ++ M S+ D+ Y TM
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
IEG+C AG+ +D + L + + G PN+V + + GLC S K
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC-SKRLLQEAYALLKKMKEDG 495
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRA 298
P+ TY +LI++ + ++ MR+
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 164/384 (42%), Gaps = 18/384 (4%)
Query: 92 HSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALW 150
H + + KAS + L+E +GC + + V+ LCK + D+AL
Sbjct: 188 HGLFQHNKASEAVA----------LVERMVVKGCQPDLVTYGAVINGLCKRGE-PDLALN 236
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L KME D V+YN +I CK ++ L +M PD+ TY +I LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
N GR DA LL DM +P+LV +A+ D + G KS C P+V
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
V Y +LI+ FC+ + E + V M G + N VT TLI + A + +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 331 LVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKD 388
+V GV + D Y+ L+ L +E A +F + ++K D + + +++ LC
Sbjct: 417 MVSDGV-HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 389 RVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPY 448
+V DG+ L ++ G G C+K EA L M + L
Sbjct: 476 KVEDGWDLFCSLSLKGV--KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 449 QDSAIDI-LRKSEEKDLVDLVNQL 471
++ I LR +E +L+ ++
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEM 557
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 4/269 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ +QL+ +AL +L KM G P V N ++ C + L+ +M P
Sbjct: 120 FCRRSQLS-LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D +T+ T++ GL + +A +L++ M V GC P+LV A+ +GLC+ G
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
K G +VV Y ++I C+ ++A ++ ++M G + T LI LC+
Sbjct: 239 NKMEK-GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGEL-KPDTL 375
G +A RL+ ++E ++ +++L+ + ++ +L EAEKL+ E++ + PD +
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMG 404
A + L+K C RV +G + M G
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 139/304 (45%), Gaps = 6/304 (1%)
Query: 98 RKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMED 157
RK L +D + D+++S V + + K+ K D+ + + +M++
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNK----FDLVISLGEQMQN 103
Query: 158 FGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPED 217
G + Y++ I C++ + + +L +M P ++T +++ G C+ R +
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 218 AYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
A +L+ M G P+ V + + GL + G C+P++VTY ++I
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVI 222
Query: 278 QSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
C+R + + ALN+L++M A+ V T+ID LC +++A+ L +K+ G+
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 338 YGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYL 396
Y+ L+ L R +A +L ++L + PD + + L+ + ++++ L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 397 LDAM 400
D M
Sbjct: 343 YDEM 346
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 118 ESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCK 176
E +++ C V + ++K CK ++ + + V R+M G +TV Y +I +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEE-GMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 177 KGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVV 236
D + + + ++M PD++TY +++GLCN G E A + + M+ ++V
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 237 LSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM 296
+ + + LC++G G +PNVVTYT+++ FC + EA + M
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 297 RAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLE 356
+ G L N T TLI + G + L+ ++ G + LV +++ RL+
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLD 582
Query: 357 EA 358
++
Sbjct: 583 KS 584
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 4/228 (1%)
Query: 216 EDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTS 275
+DA L DM P++V S + + + G N+ TY+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG-ISHNLYTYSI 115
Query: 276 LIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
I FC RSQ + AL +L +M G + VT +L++ C + EA LVD++VE G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 336 VSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGF 394
+++LV L + + EA L ++ +PD + ++ LC +
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 395 YLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
LL+ ME GLC+ H+ +A L M K +
Sbjct: 236 NLLNKMEK--GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 3/250 (1%)
Query: 137 KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC 196
+LCK A +AL + RKME+ + V Y++VI CK G + L EM +
Sbjct: 219 RLCKSGNSA-LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
D++TY ++I GLCN G+ +D +L++M P++V SA+ D + G
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
G P+ +TY SLI FC+ + +EA + D M + GC + VT LI+S C
Sbjct: 338 YNEMITRG-IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 317 DKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
V++ RL ++ G + Y++LV+ + +L A++LF+E+++ + P +
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 376 ASSLLLKELC 385
+LL LC
Sbjct: 457 TYGILLDGLC 466
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 5/308 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC + ++++ AL ++ +M ++G +PD V Y V+ CK G+ + L R+M +
Sbjct: 185 LCLKGRVSE-ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
++ Y +I+ LC G +DA SL +M + G ++V S++ GLC G
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ P+VVT+++LI F + + EA + + M G + +T +LID C
Sbjct: 304 REMIGR-NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
+ C+ EA ++ D +V G YS L+ S + KR+++ +LFRE+ + L P+T+
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
+ L+ C ++ L M + G GLC L +A ++ +
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGV--PPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 437 MLKKSVLL 444
M K + L
Sbjct: 481 MQKSRMTL 488
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 155/353 (43%), Gaps = 6/353 (1%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVL-KLCKEAQLA 145
+ G++ Y + L N + DL E +V + V+ LCK+
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D AL + +ME G + D V Y+ +I C G + G K+LREM + PD++T+ +
Sbjct: 263 D-ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I+ G+ +A L +M G +P+ + +++ DG C+ G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG- 380
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
C P++VTY+ LI S+C+ + ++ + + + + G + N +T TL+ C G + A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 326 RLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
L ++V GV Y L+ L L +A ++F ++ + ++++ +
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 385 CMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIM 437
C +V D + L ++ + G GLC+K L+EA L + M
Sbjct: 501 CNASKVDDAWSLFCSLSDKGV--KPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 136/268 (50%), Gaps = 3/268 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
C++ +L A VL + G PDT+ ++ ++ C +G V L+ M PD
Sbjct: 116 CRKKKLL-FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
L+T T+I GLC GR +A L+ M +G P+ V + + LC+SG+
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
+ + + +VV Y+ +I S C+ +++AL++ + M G A+ VT +LI LC+
Sbjct: 235 KMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 319 GCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
G ++ +++ +++ + +S+L+ ++ +L EA++L+ E++ + PDT+
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMGC 405
+ L+ C ++ + + + D M + GC
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGC 381
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 7/259 (2%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
VVT + +V KE +L + A + +M G PDT+ YN +I CK+ + +
Sbjct: 315 VVTFSALIDVF--VKEGKLLE-AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 186 LLREMSLSDAC-PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL 244
+ ++ +S C PD++TY +I C A R +D L +++ G PN + + + G
Sbjct: 372 MF-DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 245 CRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLAN 304
C+SG G P+VVTY L+ C+ + N+AL + ++M+
Sbjct: 431 CQSGKLNAAKELFQEMVSRG-VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 305 HVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFR 363
+I +C+ V++A+ L L + GV Y+ ++ L + L EA+ LFR
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 364 ELLAGELKPDTLASSLLLK 382
++ PD ++L++
Sbjct: 550 KMKEDGCTPDDFTYNILIR 568
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 5/260 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CKE L + A + M G PD V Y+++I CK V+ G +L RE+S P
Sbjct: 360 FCKENCLHE-ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ ITY T++ G C +G+ A L ++M G P++V + DGLC +G
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
KS + Y +I C S+ ++A ++ + G + VT +I LC
Sbjct: 479 EKMQKS-RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
KG + EA L K+ E G + D Y+ L+ + + L + +L E+ D+
Sbjct: 538 KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
Query: 377 SSLLLKELCMKDRVLDGFYL 396
+++ L DR LD +L
Sbjct: 598 IKMVIDML--SDRRLDKSFL 615
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 125/299 (41%), Gaps = 14/299 (4%)
Query: 162 PDTVMYNVVIRLC-----CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPE 216
P + +N RLC K+ D+ +G + M L+ D+ T MI C +
Sbjct: 68 PTPIDFN---RLCSAVARTKQYDLVLG--FCKGMELNGIEHDMYTMTIMINCYCRKKKLL 122
Query: 217 DAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
A+S+L G P+ + S + +G C G + RP++VT ++L
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPDLVTVSTL 181
Query: 277 IQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
I C + + +EAL ++DRM +G + VT +++ LC G A L K+ E +
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241
Query: 337 SYGDCYSSLVI-SLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFY 395
S+VI SL + ++A LF E+ +K D + S L+ LC + DG
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 396 LLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAID 454
+L M +G ++ L EA +L M+ + + +S ID
Sbjct: 302 MLREM--IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 146/307 (47%), Gaps = 5/307 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC+ +QL+ AL +L KM G P V N ++ C + L+ +M P
Sbjct: 110 LCRRSQLS-FALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D +T+ T++ GL + +A +L++ M V GC P+LV A+ +GLC+ G
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
K G +VV Y+++I S C+ ++ALN+ M G + T +LI LC+
Sbjct: 229 NKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 318 KGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G +A RL+ ++E ++ ++SL+ + + +L EAEKLF E++ + P+ +
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
+ L+ CM DR+ + + M + C G C+ + + +L +
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDC--LPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 437 MLKKSVL 443
M ++ ++
Sbjct: 406 MSRRGLV 412
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 134/296 (45%), Gaps = 14/296 (4%)
Query: 92 HSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALW 150
H + + KAS + L+E +GC + + V+ LCK + D+AL
Sbjct: 178 HGLFQHNKASEAVA----------LVERMVVKGCQPDLVTYGAVINGLCKRGE-PDLALN 226
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L KME D V+Y+ VI CK V+ L EM PD+ TY ++I LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
N GR DA LL DM +PN+V +++ D + G + PN+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS-IDPNI 345
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
VTY SLI FC + +EA + M + CL + VT TLI+ C V + L
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 331 LVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
+ G V Y++L+ + + A+ +F+++++ + P+ + + LL LC
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 5/269 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC + +D A +L M + P+ V +N +I K+G + EKL EM P
Sbjct: 285 LCNYGRWSD-ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+++TY ++I G C R ++A + M C P++V + + +G C++
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G N VTYT+LI F + S + A V +M + G N +T TL+D LC
Sbjct: 404 RDMSRRG-LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVIS--LIRIKRLEEAEKLFRELLAGELKPDTL 375
G +E+A + + L + + D Y+ ++S + + ++E+ LF L +KPD +
Sbjct: 463 NGKLEKAMVVFEYLQKSKME-PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMG 404
A + ++ C K + + L M+ G
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 4/202 (1%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
Q I L+ S + VVT N + CK ++ D + + R M G +TV Y +
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTL--INGFCKAKKVVD-GMELFRDMSRRGLVGNTVTYTTL 421
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
I + D + + + ++M P+++TY T+++GLC G+ E A + + ++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
P++ + + +G+C++G G +P+V+ Y ++I FC++ EA
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 291 NVLDRMRAFGCLANHVTAFTLI 312
+ +M+ G L + T TLI
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLI 562
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 4/186 (2%)
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
+A D A V ++M G P+ + YN ++ CK G +E + + S PD+
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXX 260
TY M EG+C AG+ ED + L + + G P+++ + + G C+ G
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 261 XKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC-LANHVTAFTLIDSLCDKG 319
+ G P+ TY +LI++ + ++ MR+ C A + + L+ + G
Sbjct: 547 KEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKEMRS--CRFAGDASTYGLVTDMLHDG 603
Query: 320 CVEEAY 325
+++ +
Sbjct: 604 RLDKGF 609
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 145/307 (47%), Gaps = 5/307 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ +QL +AL VL KM G P+ V + ++ C + L+ +M ++ P
Sbjct: 126 FCRRSQLP-LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ +T+ T+I GL + +A +L+ M GC P+LV + +GLC+ G
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD-TDLAFNL 243
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G P V+ Y ++I C+ ++ALN+ M G N VT +LI LC+
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G +A RL+ ++E ++ +S+L+ + ++ +L EAEKL+ E++ + P +
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
S L+ CM DR+ + + + M + C G C+ + E ++ +
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHC--FPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 437 MLKKSVL 443
M ++ ++
Sbjct: 422 MSQRGLV 428
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 122/241 (50%), Gaps = 2/241 (0%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
A A+ ++ +M G +PD V Y VV+ CK+GD ++ LL +M P ++ Y T
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+I+GLC +DA +L K+M G PN+V S++ LC G +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER- 320
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
P+V T+++LI +F + + EA + D M + VT +LI+ C ++EA
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 325 YRLVDKLV-EHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
++ + +V +H Y++L+ + KR+EE ++FRE+ L +T+ ++L++
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 384 L 384
L
Sbjct: 441 L 441
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 4/236 (1%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
PD V YN +I+ CK VE G ++ REMS + +TY +I+GL AG + A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
K+M G PN++ + + DGLC++G +S P + TY +I+ C
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMC 512
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGD 340
+ + + ++ + G + V T+I C KG EEA L ++ E G +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYL 396
CY++L+ + +R E + +L +E+ + D AS++ L + D LD +L
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGD--ASTIGLVTNMLHDGRLDKSFL 626
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 147/368 (39%), Gaps = 84/368 (22%)
Query: 92 HSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALW 150
H +++ KAS + LI+ A+GC + + V+ LCK D+A
Sbjct: 194 HGLFLHNKASEAMA----------LIDRMVAKGCQPDLVTYGVVVNGLCKRGD-TDLAFN 242
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L KME P ++YN +I CK ++ L +EM P+++TY ++I LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
N GR DA LL DM +P++ SA+ D + G K P++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSI 361
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
VTY+SLI FC + +EA + + M + C + VT TLI C VEE + +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 331 -----LVEHGVSY----------GDC---------------------YSSLVISLIRIKR 354
LV + V+Y GDC Y++L+ L + +
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 355 LEEAEKLFRELL--------------------AGEL---------------KPDTLASSL 379
LE+A +F L AG++ KPD +A +
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 380 LLKELCMK 387
++ C K
Sbjct: 542 MISGFCRK 549
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 4/233 (1%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
VVT N + CK ++ + + V R+M G +TV YN++I+ + GD +M ++
Sbjct: 396 VVTYNTL--IKGFCKYKRVEE-GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
+ +EM P+++TY T+++GLC G+ E A + + ++ P + + + +G+C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
++G G +P+VV Y ++I FC + EA + M+ G L N
Sbjct: 513 KAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEA 358
TLI + G E + L+ ++ G + LV +++ RL+++
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 5/202 (2%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
G VT N+ + L +A D+A + ++M G P+ + YN ++ CK G +E
Sbjct: 429 GNTVTYNILIQGLF---QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
+ + S P + TY MIEG+C AG+ ED + L ++ + G P++V + + G
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
CR GS + G PN Y +LI++ + ++ MR+ G A
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTL-PNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FA 603
Query: 304 NHVTAFTLIDSLCDKGCVEEAY 325
+ L+ ++ G +++++
Sbjct: 604 GDASTIGLVTNMLHDGRLDKSF 625
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 2/222 (0%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P V Y+ +I C ++ +++ M PD++TY T+I+G C R E+ +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
++M G N V + + GL ++G G PN++TY +L+ C
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLC 477
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-D 340
+ + +A+ V + ++ T +I+ +C G VE+ + L L GV
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
Y++++ R EEA+ LF+E+ P++ + L++
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 167/368 (45%), Gaps = 5/368 (1%)
Query: 39 LHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYR 98
H +E +L++ +L + +V++RC LG RFF+WA Q Y HS +Y+
Sbjct: 93 FHSRVPKLELALNESGVELRPGLIERVLNRC-GDAGNLGYRFFVWAAKQPRYCHSIEVYK 151
Query: 99 KASSLLGIDRNPQMICDLIESYEAEGC-VVTVNMFREVLKLCKEAQLADVALWVLRKMED 157
+L R + LIE E ++ +F +++ A + A+ VL +M
Sbjct: 152 SMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPK 211
Query: 158 FGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPED 217
FG PD ++ ++ CK G V+ KL +M + +L + +++ G C G+ +
Sbjct: 212 FGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYGWCRVGKMME 270
Query: 218 AYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
A +L M G P++V + + G +G + G PN YT LI
Sbjct: 271 AKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG-FEPNANCYTVLI 329
Query: 278 QSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
Q+ C+ + EA+ V M + C A+ VT L+ C G +++ Y ++D +++ G+
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 338 YGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYL 396
+ Y ++++ + + EE +L ++ E PD +++++ C V + L
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 397 LDAMENMG 404
+ ME G
Sbjct: 450 WNEMEENG 457
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 2/143 (1%)
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEG 208
L ++ KM PD +YNVVIRL CK G+V+ +L EM + P + T++ MI G
Sbjct: 412 LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471
Query: 209 LCNAGRPEDAYSLLKDMRVHG--CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
L + G +A K+M G L + + + + G C
Sbjct: 472 LASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGAC 531
Query: 267 RPNVVTYTSLIQSFCERSQWNEA 289
NV+++T I + + EA
Sbjct: 532 ELNVLSWTIWIHALFSKGYEKEA 554
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 145/307 (47%), Gaps = 5/307 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ +Q++ +AL +L KM G P V + ++ C + L+ +M P
Sbjct: 130 FCRRSQIS-LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D IT+ T+I GL + +A +L+ M GC PNLV + +GLC+ G
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-IDLAFNL 247
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++ NVV Y+++I S C+ ++ALN+ M G N +T +LI LC+
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 318 KGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
+A RL+ ++E ++ +++L+ + ++ +L EAEKL+ E++ + PD
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
S L+ CM DR+ + ++ + M + C G C+ + E +L +
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 437 MLKKSVL 443
M ++ ++
Sbjct: 426 MSQRGLV 432
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 154/382 (40%), Gaps = 49/382 (12%)
Query: 92 HSAYMYRKASSLLG-IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALW 150
H +++ KAS + +DR Q C + G VV LCK + D+A
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVN--------GLCKRGDI-DLAFN 246
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L KME + V+Y+ VI CK + L EM P++ITY ++I LC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK-------- 262
N R DA LL DM +PN+V +A+ D + G K
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 263 --------------------------SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM 296
S DC PNVVTY +LI FC+ + +E + + M
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 297 RAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRL 355
G + N VT TLI + A + ++V GV Y++L+ L + +L
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 356 EEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXX 415
E+A +F L +++P +++++ +C +V DG+ L ++ G
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV--KPDVIIYN 544
Query: 416 XXXXGLCQKNHLAEATKLAKIM 437
G C+K EA L + M
Sbjct: 545 TMISGFCRKGLKEEADALFRKM 566
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P+ V YN +I CK ++ G +L REMS + +TY T+I G A ++A +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
K M G PN++ + + DGLC++G +S P + TY +I+ C
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMC 516
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
+ + + ++ + G + + T+I C KG EEA L K+ E G
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 37/296 (12%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
+L E +G V + ++ LC + +D A +L M + P+ V +N +I
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSD-ASRLLSDMIERKINPNVVTFNALIDA 339
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
K+G + EKL EM PD+ TY ++I G C R ++A + + M C PN
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 234 LVVLSAIFDGLCRS-------------------GSXXXXXXXXXXXXKSGDC-------- 266
+V + + +G C++ G+ ++ DC
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 267 -------RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
PN++TY +L+ C+ + +A+ V + ++ T +I+ +C G
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 320 CVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
VE+ + L L GV Y++++ R EEA+ LFR++ PD+
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
VVT N + CK A+ D + + R+M G +TV Y +I + D + +
Sbjct: 400 VVTYNTL--INGFCK-AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
+ ++M P+++TY T+++GLC G+ E A + + ++ P + + + +G+C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
++G G +P+V+ Y ++I FC + EA + +MR G L +
Sbjct: 517 KAGKVEDGWDLFCSLSLKG-VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Query: 306 VT 307
T
Sbjct: 576 GT 577
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 109 NPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYN 168
N QM+ + S ++T N + LCK +L + A+ V ++ P YN
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLD--GLCKNGKL-EKAMVVFEYLQRSKMEPTIYTYN 509
Query: 169 VVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH 228
++I CK G VE G L +SL PD+I Y TMI G C G E+A +L + MR
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 229 GCSPN 233
G P+
Sbjct: 570 GPLPD 574
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 3/265 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK + AL +L KME+ + V+YN +I CK G + L EM P
Sbjct: 51 LCKMGD-TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFP 109
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D+ITY MI+ C +GR DA LL+DM +P++V SA+ + L + G
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G P +TY S+I FC++ + N+A +LD M + C + VT TLI+ C
Sbjct: 170 GDMLRRG-IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 318 KGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
V+ + ++ G V+ Y++L+ ++ L+ A+ L +++ + P+ +
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYIT 288
Query: 377 SSLLLKELCMKDRVLDGFYLLDAME 401
+L LC K + F +L+ ++
Sbjct: 289 FQSMLASLCSKKELRKAFAILEDLQ 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+++S ++ C V F ++ +A+ D + + +M G +TV Y +I C
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
+ GD++ + LL M S P+ IT+ +M+ LC+ A+++L+D++
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 154/326 (47%), Gaps = 8/326 (2%)
Query: 115 DLIESYEAEGCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
DL+ E V + ++ LC++ + D A+ + ++ME G + V YN ++R
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCI-DAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
CK G G LL++M + P++IT+ +++ G+ ++A L K+M G SPN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
++ + + DG C ++ C P++VT+TSLI+ +C + ++ + V
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD--CYSSLVISLIR 351
+ G +AN VT L+ C G ++ A L ++V HGV D Y L+ L
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV-LPDVMTYGILLDGLCD 450
Query: 352 IKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXX 411
+LE+A ++F +L ++ + + +++ +C +V D + L ++ G
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG--VKPNV 508
Query: 412 XXXXXXXXGLCQKNHLAEATKLAKIM 437
GLC+K L+EA L + M
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKM 534
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 4/272 (1%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
L++ GC V + ++ +C+ + +AL +LRKME+ + D Y+ +I
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTS-LALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
C+ G ++ L +EM ++TY +++ GLC AG+ D LLKDM PN+
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+ + + D + G G PN++TY +L+ +C +++ +EA N+LD
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIK 353
M C + VT +LI C V++ ++ + + G V+ YS LV +
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
+++ AE+LF+E+++ + PD + +LL LC
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 146/291 (50%), Gaps = 4/291 (1%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
L + E +G +V + +++ LCK + D AL +L+ M P+ + +NV++ +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVLLDVF 308
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
K+G ++ +L +EM P++ITY T+++G C R +A ++L M + CSP++
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
V +++ G C K G N VTY+ L+Q FC+ + A +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRG-LVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIK 353
M + G L + +T L+D LCD G +E+A + + L + + G Y++++ + +
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++E+A LF L +KP+ + ++++ LC K + + LL ME G
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 131/297 (44%), Gaps = 4/297 (1%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A VL K+ G PDT +N +I+ +G V L+ M + PD++TY +++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G+C +G A LL+ M ++ S I D LCR G G +
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG-IK 260
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
+VVTY SL++ C+ +WN+ +L M + + N +T L+D +G ++EA L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 328 VDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+++ G+S Y++L+ RL EA + ++ + PD + + L+K CM
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 387 KDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
RV DG + + G G CQ + A +L + M+ VL
Sbjct: 381 VKRVDDGMKVFRNISKRG--LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
E ++++ + V R +E+ G +PD V YN ++ C+ GD + LLR+M + D+
Sbjct: 171 EGKVSEAVVLVDRMVEN-GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXX 260
TY T+I+ LC G + A SL K+M G ++V +++ GLC++G
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 261 XKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGC 320
S + PNV+T+ L+ F + + EA + M G N +T TL+D C +
Sbjct: 290 V-SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 321 VEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSL 379
+ EA ++D +V + S ++SL+ +KR+++ K+FR + L + + S+
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 380 LLKELCMKDRV 390
L++ C ++
Sbjct: 409 LVQGFCQSGKI 419
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
PD V + +I+ C V+ G K+ R +S + +TY +++G C +G+ + A L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
++M HG P+++ + DGLC +G KS +V YT++I+ C
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KMDLGIVMYTTIIEGMC 484
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC 341
+ + +A N+ + G N +T +I LC KG + EA L+ K+ E G + DC
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 342 -YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSL 379
Y++L+ + +R L + KL E+ + D ASS+
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD--ASSI 581
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 114/290 (39%), Gaps = 39/290 (13%)
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
L +EM S P L+ + + + K + ++G + N+ L+ + + C
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 246 R-----------------------------------SGSXXXXXXXXXXXXKSGDCRPNV 270
R G ++G C+P+V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG-CQPDV 193
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
VTY S++ C + AL++L +M A+ T T+IDSLC GC++ A L +
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 331 LVEHGV-SYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
+ G+ S Y+SLV L + + + L +++++ E+ P+ + ++LL + +
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 390 VLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLK 439
+ + L M G G C +N L+EA + +M++
Sbjct: 314 LQEANELYKEMITRG--ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 4/231 (1%)
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
+ +DA +L ++M P+LV S F + R+ +G N+ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-NIYTL 126
Query: 274 TSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
+I FC + A +VL ++ G + T TLI L +G V EA LVD++VE
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 334 HGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLD 392
+G Y+S+V + R A L R++ +K D S ++ LC +
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 393 GFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
L ME G GLC+ + L K M+ + ++
Sbjct: 247 AISLFKEMETKG--IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC +L + AL + ++ VMY +I CK G VE L + P
Sbjct: 448 LCDNGKL-EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG 248
+++TY MI GLC G +A LL+ M G +PN + + R G
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 124/255 (48%), Gaps = 2/255 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ ++ +M + G +PD VMY +I CK G V L +M PD++ Y +++
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
GLCN+GR DA SLL+ M P+++ +A+ D + G +
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM-SIA 279
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PN+ TYTSLI FC +EA + M GC + V +LI+ C V++A ++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 328 VDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
++ + G++ Y++L+ ++ + A+++F +++ + P+ ++LL LC
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 387 KDRVLDGFYLLDAME 401
+V + + M+
Sbjct: 400 NGKVKKALMIFEDMQ 414
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 15/276 (5%)
Query: 113 ICDLIE----SYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYN 168
+CD ++ S++ C + +N F C+ +Q +A L KM G PD V +
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCF------CQSSQ-PYLASSFLGKMMKLGFEPDIVTFT 146
Query: 169 VVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH 228
+I C +E ++ +M PD++ Y T+I+ LC G A SL M +
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 229 GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNE 288
G P++V+ +++ +GLC SG K +P+V+T+ +LI +F + ++ +
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLD 265
Query: 289 ALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD--CYSSLV 346
A + + M N T +LI+ C +GCV+EA R + L+E + D Y+SL+
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA-RQMFYLMETKGCFPDVVAYTSLI 324
Query: 347 ISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
+ K++++A K+F E+ L +T+ + L++
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 2/274 (0%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
F ++L + + + DV + + ++ G D N+++ C+ + L +M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
PD++T+ ++I G C R E+A S++ M G P++V+ + I D LC++G
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
G RP+VV YTSL+ C +W +A ++L M + +T L
Sbjct: 195 YALSLFDQMENYG-IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
ID+ +G +A L ++++ ++ Y+SL+ ++EA ++F +
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 371 KPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
PD +A + L+ C +V D + M G
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 91/224 (40%), Gaps = 3/224 (1%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
D A + ME G PD V Y +I CK V+ K+ EMS + ITY T
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKS- 263
+I+G G+P A + M G PN+ + + LC +G K
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 264 -GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVE 322
PN+ TY L+ C + +AL V + MR +T +I +C G V+
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 323 EAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFREL 365
A L L GV Y++++ L R EA LFR++
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 16/312 (5%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEA------EGCVVTVNMFREVLK-LC 139
+ G + ++Y+Y LL IC L E+ EA +G + ++ ++ C
Sbjct: 309 RKGLKPNSYIYGSIIGLLC------RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 140 KEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDL 199
K + + + +M PD + Y +I C+ GD+ KL EM PD
Sbjct: 363 KRGDIRAASKF-FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
+T+ +I G C AG +DA+ + M GCSPN+V + + DGLC+ G
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
K G +PN+ TY S++ C+ EA+ ++ A G A+ VT TL+D+ C G
Sbjct: 482 MWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 320 CVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
+++A ++ +++ G+ ++ L+ LE+ EKL +LA + P+ +
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 379 LLLKELCMKDRV 390
L+K+ C+++ +
Sbjct: 601 SLVKQYCIRNNL 612
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 3/267 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
CK + D A V M G P+ V Y +I CK+GD++ +LL EM P+
Sbjct: 432 CKAGHMKD-AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
+ TY +++ GLC +G E+A L+ + G + + V + + D C+SG
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
G +P +VT+ L+ FC + +L+ M A G N T +L+ C +
Sbjct: 551 EMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 319 GCVEEAYRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
++ A + + GV G Y +LV + + ++EA LF+E+
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMG 404
S+L+K + + L+ + D M G
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 139/342 (40%), Gaps = 39/342 (11%)
Query: 137 KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC 196
+L K+ A+ V R+ + G + YN+VI C+ G ++ LL M L
Sbjct: 219 RLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT 278
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN----------------------- 233
PD+I+Y T++ G C G + + L++ M+ G PN
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 234 ------------LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
VV + + DG C+ G S D P+V+TYT++I FC
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGD-IRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-D 340
+ EA + M G + VT LI+ C G +++A+R+ + +++ G S
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
Y++L+ L + L+ A +L E+ L+P+ + ++ LC + + L+
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 401 ENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
E G C+ + +A ++ K ML K +
Sbjct: 518 EAAGL--NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 3/220 (1%)
Query: 86 FQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVL-KLCKEAQL 144
++ G + + + Y + L N + L+ +EA G + ++ CK ++
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
D A +L++M G +P V +NV++ C G +E GEKLL M P+ T+ +
Sbjct: 543 -DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+++ C + A ++ KDM G P+ + G C++ + G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLAN 304
+V TY+ LI+ F +R ++ EA V D+MR G A+
Sbjct: 662 -FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 16/312 (5%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEA------EGCVVTVNMFREVLK-LC 139
+ G + ++Y+Y LL IC L E+ EA +G + ++ ++ C
Sbjct: 309 RKGLKPNSYIYGSIIGLLC------RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 140 KEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDL 199
K + + + +M PD + Y +I C+ GD+ KL EM PD
Sbjct: 363 KRGDIRAASKF-FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
+T+ +I G C AG +DA+ + M GCSPN+V + + DGLC+ G
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
K G +PN+ TY S++ C+ EA+ ++ A G A+ VT TL+D+ C G
Sbjct: 482 MWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 320 CVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
+++A ++ +++ G+ ++ L+ LE+ EKL +LA + P+ +
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 379 LLLKELCMKDRV 390
L+K+ C+++ +
Sbjct: 601 SLVKQYCIRNNL 612
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 3/267 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
CK + D A V M G P+ V Y +I CK+GD++ +LL EM P+
Sbjct: 432 CKAGHMKD-AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
+ TY +++ GLC +G E+A L+ + G + + V + + D C+SG
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
G +P +VT+ L+ FC + +L+ M A G N T +L+ C +
Sbjct: 551 EMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 319 GCVEEAYRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
++ A + + GV G Y +LV + + ++EA LF+E+
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMG 404
S+L+K + + L+ + D M G
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 139/342 (40%), Gaps = 39/342 (11%)
Query: 137 KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC 196
+L K+ A+ V R+ + G + YN+VI C+ G ++ LL M L
Sbjct: 219 RLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT 278
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN----------------------- 233
PD+I+Y T++ G C G + + L++ M+ G PN
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 234 ------------LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
VV + + DG C+ G S D P+V+TYT++I FC
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGD-IRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-D 340
+ EA + M G + VT LI+ C G +++A+R+ + +++ G S
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
Y++L+ L + L+ A +L E+ L+P+ + ++ LC + + L+
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 401 ENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
E G C+ + +A ++ K ML K +
Sbjct: 518 EAAGL--NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 3/220 (1%)
Query: 86 FQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVL-KLCKEAQL 144
++ G + + + Y + L N + L+ +EA G + ++ CK ++
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
D A +L++M G +P V +NV++ C G +E GEKLL M P+ T+ +
Sbjct: 543 -DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+++ C + A ++ KDM G P+ + G C++ + G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLAN 304
+V TY+ LI+ F +R ++ EA V D+MR G A+
Sbjct: 662 -FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 137/297 (46%), Gaps = 6/297 (2%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ ++ M+ FG P+ V+YN VI CK D+ ++ M D +TY T+I
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
GL N+GR DA LL+DM PN++ +A+ D + G+ +
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS-VV 286
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PNV TY SLI FC +A + D M + GC + VT TLI C VE+ +L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 328 VDKLVEHGVSYGDC--YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
++ G+ GD Y++L+ + +L A+K+F ++ + PD + ++LL LC
Sbjct: 347 FCEMTYQGL-VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405
Query: 386 MKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
++ +++ ++ GLC+ + L EA L + + +K V
Sbjct: 406 NNGKIEKALVMVEDLQK--SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 133/314 (42%), Gaps = 39/314 (12%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
Q L++S + G V V ++ V+ LCK L + AL V ME G R D V YN
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN-ALEVFYCMEKKGIRADAVTYNT 224
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG 229
+I G +LLR+M P++I + +I+ G +A +L K+M
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 230 CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEA 289
PN+ +++ +G C G G C P+VVTY +LI FC+ + +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG-CFPDVVTYNTLITGFCKSKRVEDG 343
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS-----YG---DC 341
+ + M G + + T TLI C G + A ++ +++V+ GVS Y DC
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 342 ----------------------------YSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
Y+ ++ L R +L+EA LFR L +KPD
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 374 TLASSLLLKELCMK 387
+A ++ LC K
Sbjct: 464 AIAYITMISGLCRK 477
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 147/356 (41%), Gaps = 10/356 (2%)
Query: 86 FQSGYRHSAYMYRKASSL--LGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQ 143
F H Y R + L + D + C++++S + ++ F VL + +
Sbjct: 38 FSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRP----IPSIVDFTRVLTVIAKMN 93
Query: 144 LADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYI 203
D+ +++ KME+ G D + ++I C+ + + LL +M P ++T
Sbjct: 94 KFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLG 153
Query: 204 TMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKS 263
+++ G C R ++A SL+ M G PN+V+ + + +GLC++ K
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 264 GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEE 323
G R + VTY +LI +W +A +L M N + LID+ +G + E
Sbjct: 214 G-IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 324 AYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
A L +++ V Y+SL+ L +A+ +F +++ PD + + L+
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 383 ELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIML 438
C RV DG L M G G CQ L A K+ M+
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQG--LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 116/272 (42%), Gaps = 28/272 (10%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTV-NMFREVLK----------------LCKEAQLADVA 148
ID N LI+++ EG ++ N+++E+++ C L D A
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD-A 308
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEG 208
++ M G PD V YN +I CK VE G KL EM+ D TY T+I G
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 209 LCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRP 268
C AG+ A + M G SP++V + + D LC +G KS +
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS-EMDV 427
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
+++TY +IQ C + EA + + G + + T+I LC KG EA +L
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 329 DKLVEHGV---------SYGDCYSSLVISLIR 351
++ E G + D Y+SL LI+
Sbjct: 488 RRMKEDGFMPSERIYDETLRDHYTSLSAELIK 519
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 189/456 (41%), Gaps = 34/456 (7%)
Query: 10 SPCLHKLKTLPFSSQKMGMASLADTLYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRC 69
+P H+ P Q + ++A +SHL Q + + L+K+ LDS V V+ +
Sbjct: 39 TPIPHRRNPEP-KGQDLDFVNVA---HSHLIQSDW---DKLNKLSDHLDSFRVKNVLLKI 91
Query: 70 CPKQCQLGVRFFIWAGFQSGYRHS-------------AYMYRKASSLL-------GIDRN 109
K L + FF WA ++ HS ++ A S+L G+D
Sbjct: 92 -QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLP 150
Query: 110 PQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
++ L+ SY C T +F + K + A +M+D+G P N
Sbjct: 151 AKVFDALLYSYRE--CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNA 208
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG 229
+ +G V++ + REM P+ T ++ G C +G+ + LL+DM G
Sbjct: 209 YMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLG 268
Query: 230 CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEA 289
V + + G C G KSG +PNVVT+ +LI FC + EA
Sbjct: 269 FRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSG-LQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVIS 348
V M+A N VT TLI+ +G E A+R + +V +G+ Y++L+
Sbjct: 328 SKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 349 LIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXX 408
L + + +A + +EL L P++ S L+ C++ GF L +M GC
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC--H 445
Query: 409 XXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLL 444
C+ A+++ + M+++S+ L
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 130/288 (45%), Gaps = 17/288 (5%)
Query: 93 SAYMYRKASSLLGIDRNPQMICDLIESY--EAEGCVVTVNMFREVLKL---CKEAQLADV 147
+AYM SSLLG R D+ + E C ++ N + + + C+ +L D
Sbjct: 207 NAYM----SSLLGQGR-----VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL-DK 256
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
+ +L+ ME G R V YN +I C+KG + KL M S P+++T+ T+I
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G C A + ++A + +M+ +PN V + + +G + G +G R
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
+++TY +LI C++++ +A + + + N T LI C + + + L
Sbjct: 377 -DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL 435
Query: 328 VDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
++ G + ++ LV + R + + A ++ RE++ + D+
Sbjct: 436 YKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDS 483
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 189/456 (41%), Gaps = 34/456 (7%)
Query: 10 SPCLHKLKTLPFSSQKMGMASLADTLYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRC 69
+P H+ P Q + ++A +SHL Q + + L+K+ LDS V V+ +
Sbjct: 39 TPIPHRRNPEP-KGQDLDFVNVA---HSHLIQSDW---DKLNKLSDHLDSFRVKNVLLKI 91
Query: 70 CPKQCQLGVRFFIWAGFQSGYRHS-------------AYMYRKASSLL-------GIDRN 109
K L + FF WA ++ HS ++ A S+L G+D
Sbjct: 92 -QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLP 150
Query: 110 PQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
++ L+ SY C T +F + K + A +M+D+G P N
Sbjct: 151 AKVFDALLYSYRE--CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNA 208
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG 229
+ +G V++ + REM P+ T ++ G C +G+ + LL+DM G
Sbjct: 209 YMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLG 268
Query: 230 CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEA 289
V + + G C G KSG +PNVVT+ +LI FC + EA
Sbjct: 269 FRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSG-LQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVIS 348
V M+A N VT TLI+ +G E A+R + +V +G+ Y++L+
Sbjct: 328 SKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 349 LIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXX 408
L + + +A + +EL L P++ S L+ C++ GF L +M GC
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC--H 445
Query: 409 XXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLL 444
C+ A+++ + M+++S+ L
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 130/288 (45%), Gaps = 17/288 (5%)
Query: 93 SAYMYRKASSLLGIDRNPQMICDLIESY--EAEGCVVTVNMFREVLKL---CKEAQLADV 147
+AYM SSLLG R D+ + E C ++ N + + + C+ +L D
Sbjct: 207 NAYM----SSLLGQGR-----VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL-DK 256
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
+ +L+ ME G R V YN +I C+KG + KL M S P+++T+ T+I
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G C A + ++A + +M+ +PN V + + +G + G +G R
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
+++TY +LI C++++ +A + + + N T LI C + + + L
Sbjct: 377 -DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL 435
Query: 328 VDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
++ G + ++ LV + R + + A ++ RE++ + D+
Sbjct: 436 YKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDS 483
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 151/324 (46%), Gaps = 7/324 (2%)
Query: 142 AQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLIT 201
A+ D A+ + KM+D P Y V+I+ C L++EM + P++ T
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 202 YITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXX 261
Y +I+ LC+ + E A LL M G PN++ +A+ +G C+ G
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG-MIEDAVDVVELM 419
Query: 262 KSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCV 321
+S PN TY LI+ +C +S ++A+ VL++M L + VT +LID C G
Sbjct: 420 ESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 322 EEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLL 380
+ AYRL+ + + G V Y+S++ SL + KR+EEA LF L + P+ + + L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 381 LKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKK 440
+ C +V + +L+ M + C GLC L EAT L + M+K
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH--GLCADGKLKEATLLEEKMVK- 595
Query: 441 SVLLRPPYQDSAIDILRKSEEKDL 464
+ L+P I I R ++ D
Sbjct: 596 -IGLQPTVSTDTILIHRLLKDGDF 618
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 144/317 (45%), Gaps = 3/317 (0%)
Query: 89 GYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVA 148
G R + Y L + R DL + + C TV + ++K ++ A
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEG 208
L ++++ME+ G +P+ Y V+I C + E +LL +M P++ITY +I G
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 209 LCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRP 268
C G EDA +++ M SPN + + G C+S + P
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERK--VLP 460
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
+VVTY SLI C ++ A +L M G + + T ++IDSLC VEEA L
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 329 DKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
D L + GV+ Y++L+ + +++EA + ++L+ P++L + L+ LC
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 388 DRVLDGFYLLDAMENMG 404
++ + L + M +G
Sbjct: 581 GKLKEATLLEEKMVKIG 597
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 5/293 (1%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
D++E E+ + E++K CK A+ VL KM + PD V YN +I
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSN--VHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
C+ G+ + +LL M+ PD TY +MI+ LC + R E+A L + G +PN
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
+V+ +A+ DG C++G S +C PN +T+ +LI C + EA +
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKML-SKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY-GDCYSSLVISLIRI 352
++M G T LI L G + AY +++ G Y++ + + R
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
RL +AE + ++ + PD S L+K + F +L M + GC
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 9/314 (2%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P+ YN ++ CK G+VE + + ++ + PD TY ++I G C + A+ +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+M + GC N V + + GLC K +C P V TYT LI+S C
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLC-VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-D 340
+ +EALN++ M G N T LIDSLC + E+A L+ +++E G+
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
Y++L+ + +E+A + + + +L P+T + L+K C K V +L+ M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKM 453
Query: 401 ENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKS- 459
+ G C+ + A +L +M + ++ S ID L KS
Sbjct: 454 --LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 460 ---EEKDLVDLVNQ 470
E DL D + Q
Sbjct: 512 RVEEACDLFDSLEQ 525
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 21/288 (7%)
Query: 114 CDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
CDL +S E +G V M+ ++ +A D A +L KM P+++ +N +I
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
C G ++ L +M P + T +I L G + AYS + M G P+
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
+ CR G ++G P++ TY+SLI+ + + Q N A +VL
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENG-VSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 294 DRMRAFGCLANHVTAFTLIDSLCD------KGCVEE------------AYRLVDKLVEHG 335
RMR GC + T +LI L + KG E L++K+VEH
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755
Query: 336 VS-YGDCYSSLVISLIRIKRLEEAEKLFRELLAGE-LKPDTLASSLLL 381
V+ Y L++ + + L AEK+F + E + P L + LL
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 112/281 (39%), Gaps = 23/281 (8%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A ++M G++PD Y I+ C++G + E ++ +M + PDL TY ++
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG---------------LCRSGSX 250
I+G + G+ A+ +LK MR GC P+ ++ LC +
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 251 XXXXXXXXXXXK--SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM-RAFGCLANHVT 307
K PN +Y LI CE A V D M R G + +
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKL--VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFREL 365
L+ C EA ++VD + V H C L+ L + E +F+ L
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC-KVLICGLYKKGEKERGTSVFQNL 857
Query: 366 LAGELKPDTLASSLLLKELCMKDRVLDGFY-LLDAMENMGC 405
L D LA +++ + K +++ FY L + ME GC
Sbjct: 858 LQCGYYEDELAWKIIIDGVG-KQGLVEAFYELFNVMEKNGC 897
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 8/301 (2%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A+ +LR M G PDT+ YN++I CKKG + LL +MSLS + PD+ITY T+
Sbjct: 156 DKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I + + G E A KD +GC P ++ + + + +CR G
Sbjct: 216 IRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEG- 274
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
C P++VTY SL+ C R E +V+ + + G N VT TL+ SLC +E
Sbjct: 275 CYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVE 334
Query: 326 RLVDKLVEHGVSYGD---CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
+++ + + SY Y+ L+ L + + L A F ++L + PD + + +L
Sbjct: 335 EILN--IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLG 392
Query: 383 ELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
+ + V D LL ++N C GL +K + +A +L ML +
Sbjct: 393 AMSKEGMVDDAIELLGLLKNTCC--PPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Query: 443 L 443
Sbjct: 451 F 451
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 143/349 (40%), Gaps = 42/349 (12%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
+T NM + LCK+ + AL +L M GS PD + YN VIR G+ E +
Sbjct: 174 TITYNMI--IGNLCKKGHIR-TALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 186 -----------------------------------LLREMSLSDACPDLITYITMIEGLC 210
+L +M++ PD++TY +++ C
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
G E+ S+++ + HG N V + + LC ++ C P V
Sbjct: 291 RRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC-PTV 349
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
+TY LI C+ + A++ +M CL + VT T++ ++ +G V++A L+
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGL 409
Query: 331 LVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
L G Y+S++ L + +++A +L+ ++L + PD + L+ C +
Sbjct: 410 LKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANL 469
Query: 390 VLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIML 438
V + +L N G GLC+K + A ++ +IML
Sbjct: 470 VEEAGQVLKETSNRG--NGIRGSTYRLVIQGLCKKKEIEMAIEVVEIML 516
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P + YN++I CK + +M PD++TY T++ + G +DA L
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
L ++ C P L+ +++ DGL + G +G P+ +T SLI FC
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG-IFPDDITRRSLIYGFC 465
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC 341
+ EA VL G T +I LC K +E A +V+ ++ G C
Sbjct: 466 RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLT-----GGC 520
Query: 342 YSSLVISLIRIKRLEE 357
I +K +EE
Sbjct: 521 KPDETIYTAIVKGVEE 536
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 1/168 (0%)
Query: 123 EGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
+ C+ + + VL + + D A+ +L +++ P + YN VI KKG ++
Sbjct: 378 QKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKK 437
Query: 183 GEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD 242
+L +M + PD IT ++I G C A E+A +LK+ G +
Sbjct: 438 ALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQ 497
Query: 243 GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
GLC+ +G C+P+ YT++++ E +EA+
Sbjct: 498 GLCKKKEIEMAIEVVEIML-TGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 157/325 (48%), Gaps = 9/325 (2%)
Query: 46 VENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLG 105
V LSK + V+QV+ R Q FFIWA Q+GY HS + Y +LG
Sbjct: 119 VVKELSKCDVVVTESLVLQVLRRFSNGWNQ-AYGFFIWANSQTGYVHSGHTYNAMVDVLG 177
Query: 106 IDRNPQMICDLIE--SYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKME-DFGSRP 162
RN ++ +L+ + E +VT++ +V++ ++ + A+ +ME +G +
Sbjct: 178 KCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKT 237
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC-PDLITYITMIEGLCNAGRPEDAYSL 221
DT+ N ++ K+ +E ++ + L D PD T+ +I G C A + +DA ++
Sbjct: 238 DTIAMNSLMDALVKENSIEHAHEVF--LKLFDTIKPDARTFNILIHGFCKARKFDDARAM 295
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+ M+V +P++V ++ + C+ G ++G C PNVVTYT ++ S
Sbjct: 296 MDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG-CNPNVVTYTIVMHSLG 354
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD- 340
+ Q EAL V ++M+ GC+ + +LI L G ++A + + + GV
Sbjct: 355 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVL 414
Query: 341 CYSSLVISLIRIKRLEEAEKLFREL 365
Y++++ + + R E A +L + +
Sbjct: 415 VYNTMISAALHHSRDEMALRLLKRM 439
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 8/240 (3%)
Query: 113 ICDLIESYEAEGCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVI 171
+ +++E GC V + V+ L K Q+A+ AL V KM++ G PD Y+ +I
Sbjct: 327 VNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAE-ALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 172 RLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLK---DMRVH 228
+ K G + ++ +M+ D++ Y TMI + R E A LLK D
Sbjct: 386 HILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Query: 229 GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNE 288
CSPN+ + + C K+ D +V TY LI+ C + E
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKN-DVSIDVSTYILLIRGLCMSGKVEE 504
Query: 289 ALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVIS 348
A + G + T L+D L +K + EA + LV+ + D +S L +S
Sbjct: 505 ACLFFEEAVRKGMVPRDSTCKMLVDEL-EKKNMAEAKLKIQSLVQSK-TMIDSHSPLSVS 562
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 177/406 (43%), Gaps = 12/406 (2%)
Query: 44 GSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSL 103
G + N L +KP SQ + S+ ++ ++FF WA Q YRH +Y +
Sbjct: 163 GQMRNLLRSLKP---SQVCAVLRSQ---DDERVALKFFYWADRQWRYRHDPMVYYSMLEV 216
Query: 104 LGIDRNPQMICDLIESYEAEGCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRP 162
L + Q ++ + G T F V+ + QL D AL VL M+ G P
Sbjct: 217 LSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRD-ALKVLTLMQRAGVEP 275
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
+ ++ N I + + +E + L M + P+++TY MI G C+ R E+A LL
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+DM GC P+ V I LC+ K P+ VTY +LI +
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-- 340
+EAL L + G + + ++ +LC +G + EA L+++++ G D
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
Y+++V R+ +++A+KL + + KP+T++ + LL +C + L+ +++
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 515
Query: 401 ENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRP 446
E GL ++ L+EA + + M+ K P
Sbjct: 516 EEHWW--SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 36/237 (15%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
V LCKE ++++ + + PD V Y V+ C+ G+V+ +KLL+ M
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL---------- 244
P+ ++Y ++ G+C G+ +A ++ H SPN + S I GL
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544
Query: 245 -------------------------CRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQS 279
CR G G C NVV +T++I
Sbjct: 545 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG-CAINVVNFTTVIHG 603
Query: 280 FCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
FC+ + + AL+VLD M A+ T TL+D+L KG + EA L+ K++ G+
Sbjct: 604 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 7/215 (3%)
Query: 123 EGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
+GC + V F V+ C+ +L D AL VL M D Y ++ KKG +
Sbjct: 588 KGCAINVVNFTTVIHGFCQNDEL-DAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDM-RVHGCSPNLVVLSAI 240
+L+++M P +TY T+I C G+ +D ++L+ M C + + +
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR---TIYNQV 703
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
+ LC G ++ R + T +L++ + ++ A V RM
Sbjct: 704 IEKLCVLGKLEEADTLLGKVLRTA-SRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRN 762
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
+ + L L KG V+EA +L+ +LVE G
Sbjct: 763 LIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ +QL+ +AL VL KM G PD V + ++ C + L+ +M P
Sbjct: 128 FCRRSQLS-LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D T+ T+I GL + +A +L+ M GC P+LV + +GLC+ G
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD-IDLALNL 245
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++ + NVV + ++I S C+ A+++ M G N VT +LI+ LC+
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 318 KGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G +A RL+ ++E ++ +++L+ + + +L EAEKL E++ + PDT+
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGC 405
+LL+ CM +R+ + + M + C
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 14/296 (4%)
Query: 92 HSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALW 150
H +++ KAS + L++ GC + + V+ LCK + D+AL
Sbjct: 196 HGLFLHNKASEAVA----------LVDQMVQRGCQPDLVTYGTVVNGLCKRGDI-DLALN 244
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L KME + + V++N +I CK VE+ L EM P+++TY ++I LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
N GR DA LL +M +PN+V +A+ D + G + P+
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS-IDPDT 363
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
+TY LI FC ++ +EA + M + CL N T TLI+ C VE+ L +
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 331 LVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
+ + G V Y++++ + + A+ +F+++++ + D + S+LL LC
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 3/267 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
C +++D A+ ++ +M + G +PDT + +I L+ +M PD
Sbjct: 164 CHSKRISD-AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
L+TY T++ GLC G + A +LL M N+V+ + I D LC+
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFT 282
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
G RPNVVTY SLI C +W++A +L M N VT LID+ +
Sbjct: 283 EMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 319 GCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
G + EA +L +++++ + Y+ L+ RL+EA+++F+ +++ + P+
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMG 404
+ L+ C RV DG L M G
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRG 428
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 175/414 (42%), Gaps = 27/414 (6%)
Query: 83 WAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEA 142
+A YR + + S ++ +D + D+++S V F ++L +
Sbjct: 43 FASASGDYRE--ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIV----EFNKLLSAVAKM 96
Query: 143 QLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITY 202
++ + + +M+ G D Y++ I C++ + + +L +M PD++T
Sbjct: 97 NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 156
Query: 203 ITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK 262
+++ G C++ R DA +L+ M G P+ + + GL +
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVE 322
G C+P++VTY +++ C+R + ALN+L++M A AN V T+IDSLC VE
Sbjct: 217 RG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 323 EAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
A L ++ G+ Y+SL+ L R +A +L +L ++ P+ + + L+
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 382 KELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKS 441
+ ++++ L + M + G C N L EA ++ K M+ K
Sbjct: 336 DAFFKEGKLVEAEKLHEEM--IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 442 VLLRPPYQ---------------DSAIDILRKSEEKDLVDLVNQLTGIRKGLGQ 480
L P Q + +++ R+ ++ LV T I +G Q
Sbjct: 394 CL--PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 5/222 (2%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
PDT+ YN++I C ++ +++ + M D P++ TY T+I G C R ED L
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
++M G N V + I G ++G S +++TY+ L+ C
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV-SNRVPTDIMTYSILLHGLC 479
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL-VEHGVSYGD 340
+ + AL + ++ N T+I+ +C G V EA+ L L ++ V
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV--- 536
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
Y++++ L + L+EA+ LFR++ P++ + L++
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 115/241 (47%), Gaps = 12/241 (4%)
Query: 122 AEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
++ C+ + + ++ CK ++ D + + R+M G +TV Y +I+ + GD
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVED-GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
+ + + ++M + D++TY ++ GLC+ G+ + A + K ++ N+ + + +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
+G+C++G S +P+VVTY ++I C + EA ++ +M+ G
Sbjct: 510 IEGMCKAGKVGEAWDLFC----SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 301 CLANHVTAFTLIDSL---CDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEE 357
L N T TLI + CD+ E L+ ++ G SLV +++ RL++
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAE---LIKEMRSSGFVGDASTISLVTNMLHDGRLDK 622
Query: 358 A 358
+
Sbjct: 623 S 623
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+L G V + +++ +A D A V ++M D + Y++++
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
C G ++ + + + S+ ++ Y TMIEG+C AG+ +A+ L + + P++
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---KPDV 535
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF---CERSQWNEALN 291
V + + GLC S K PN TY +LI++ C+R+ E
Sbjct: 536 VTYNTMISGLC-SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE--- 591
Query: 292 VLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
++ MR+ G + + T +L+ ++ G +++++
Sbjct: 592 LIKEMRSSGFVGDAST-ISLVTNMLHDGRLDKSF 624
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC+ D L + +M G PD+ Y +I C+ G ++ +KL EM D P
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
++TY ++I GLC + ++A L++M+ G PN+ S++ DGLC+ G
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
G CRPN+VTYT+LI C+ + EA+ +LDRM G + +I C
Sbjct: 286 EMMMARG-CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 318 KGCVEEAYRLVDKLVEHGVS 337
EA +D+++ G++
Sbjct: 345 ISKFREAANFLDEMILGGIT 364
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 132/305 (43%), Gaps = 38/305 (12%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDF---------------- 158
DLI + E CVV+ ++ + + +L V KM+DF
Sbjct: 72 DLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 159 -------------------GSRPDTVMYNVVIR-LCCKKGDVEMGEKLLREMSLSDACPD 198
G P NV+I+ LC G V+ G K+ EM PD
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
TY T+I GLC GR ++A L +M C+P +V +++ +GLC S +
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN-VDEAMRYL 250
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
KS PNV TY+SL+ C+ + +A+ + + M A GC N VT TLI LC +
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 319 GCVEEAYRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
++EA L+D++ G+ Y ++ I + EA E++ G + P+ L
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Query: 378 SLLLK 382
++ +K
Sbjct: 371 NIHVK 375
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 1/221 (0%)
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL 244
++ +M D P Y+T++ L + A+ K+MR G P + L+ + L
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 245 CRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLAN 304
CR+ C P+ TY +LI C + +EA + M C
Sbjct: 167 CRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 305 HVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFR 363
VT +LI+ LC V+EA R ++++ G+ YSSL+ L + R +A +LF
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 364 ELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++A +P+ + + L+ LC + ++ + LLD M G
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 11/216 (5%)
Query: 117 IESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+E +++G V + ++ LCK+ + A+ + M G RP+ V Y +I C
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ-AMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
K+ ++ +LL M+L PD Y +I G C + +A + L +M + G +PN +
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 236 VLS-------AIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNE 288
+ + GLC + +S V T SL++ C++ ++ +
Sbjct: 369 TWNIHVKTSNEVVRGLC--ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQK 426
Query: 289 ALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
A+ ++D + GC+ + T LI DK V EA
Sbjct: 427 AVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEA 462
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
+L E A GC + + ++ LCKE ++ + A+ +L +M G +PD +Y VI
Sbjct: 283 ELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE-AVELLDRMNLQGLKPDAGLYGKVISG 341
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYIT-------MIEGLCNAGRPEDAYSLLKDMR 226
C L EM L P+ +T+ ++ GLC A P A++L MR
Sbjct: 342 FCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMR 400
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
G S + L ++ LC+ G G C P+ T+ LI +++
Sbjct: 401 SRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDG-CIPSKGTWKLLIGHTLDKTIV 459
Query: 287 NEALNVLDR 295
EA + L R
Sbjct: 460 GEASDTLLR 468
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 2/243 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G P+ V+YN +I CK G++ + +LL EM D++TY T++ GLC +GR DA
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
+L+DM +P++V +A+ D + G+ +S PN VTY S+I
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVTYNSIIN 289
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
C + +A D M + GC N VT TLI C V+E +L ++ G +
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 339 GD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
Y++L+ ++ +L A +F +++ + PD + +LL LC+ +
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 398 DAM 400
D M
Sbjct: 410 DDM 412
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 4/301 (1%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLA 145
+SGY + +Y L + + +L+ E +G V + +L LC + +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A +LR M PD V + +I + K+G+++ ++L +EM S P+ +TY ++
Sbjct: 229 DAA-RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I GLC GR DA M GC PN+V + + G C+ G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG- 346
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
++ TY +LI +C+ + AL++ M + + +T L+ LC G +E A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 326 RLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
D + E G Y+ ++ L + ++E+A +LF L +KPD ++++ L
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 385 C 385
C
Sbjct: 467 C 467
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
F +L + + ++ +KME +G D + ++I C+ + +L +M
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
P ++T+ +++ G C R DA+SL+ M G PN+VV + + DGLC++G
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
K G +VVTY +L+ C +W++A +L M + VT L
Sbjct: 194 IALELLNEMEKKG-LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
ID +G ++EA L ++++ V + Y+S++ L RL +A+K F + +
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 371 KPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
P+ + + L+ C V +G L M
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 4/251 (1%)
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
++M L DL ++ +I C R A S+L M G P++V ++ G C
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
KSG PNVV Y +LI C+ + N AL +L+ M G A+ VT
Sbjct: 155 NRIGDAFSLVILMVKSG-YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELL 366
TL+ LC G +A R++ +++ ++ +++L+ ++ L+EA++L++E++
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNH 426
+ P+ + + ++ LCM R+ D D M + GC G C+
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC--FPNVVTYNTLISGFCKFRM 331
Query: 427 LAEATKLAKIM 437
+ E KL + M
Sbjct: 332 VDEGMKLFQRM 342
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC +L D A M G P+ V YN +I CK V+ G KL + MS
Sbjct: 291 LCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D+ TY T+I G C G+ A + M +P+++ + GLC +G
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+S + +V Y +I C+ + +A + R+ G + T +I LC
Sbjct: 410 DDMRES-EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 318 KGCVEEAYRLVDKLVEHGV 336
G EA L+ ++ E G+
Sbjct: 469 NGPRREADELIRRMKEEGI 487
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 1/181 (0%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
++GC V + ++ + ++ D + + ++M G D YN +I C+ G +
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
+ + M PD+IT+ ++ GLC G E A DMR +V + +
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
GLC++ G +P+ TYT +I C+ EA ++ RM+ G
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEG-VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Query: 302 L 302
+
Sbjct: 488 I 488
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 150/344 (43%), Gaps = 42/344 (12%)
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
E L + A+W RKM D G +P+ + + +I CKKG ++ ++L EM + P++
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 201 TYITMIEGLCNAGRPEDAYSL-LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
T+ +I+GLC G E A+ L LK +R PN+ +++ G C+
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
+ G PNV TYT+LI C+ + A +++ M G + N T IDSLC K
Sbjct: 384 MKEQG-LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 320 CVEEAYRLVDK-----LVEHGVSYG-----DCYSS------------------------- 344
EAY L++K L GV+Y C +
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502
Query: 345 -LVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENM 403
L+ + R K+++E+E+LF+ +++ L P + ++ C + + M+
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 562
Query: 404 GCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPP 447
GC GLC+K+ + EA KL + M+ + L PP
Sbjct: 563 GC--VPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG--LSPP 602
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 2/266 (0%)
Query: 140 KEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDL 199
++ ++ + W L M G PD +++ C+ G V R+M P+L
Sbjct: 229 RDGKIQEADRW-LTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNL 287
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
I + ++I+GLC G + A+ +L++M +G PN+ +A+ DGLC+ G
Sbjct: 288 INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLK 347
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
+S +PNV TYTS+I +C+ + N A + RM+ G N T TLI+ C G
Sbjct: 348 LVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG 407
Query: 320 CVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
AY L++ + + G Y++ + SL + R EA +L + + L+ D + +
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467
Query: 379 LLLKELCMKDRVLDGFYLLDAMENMG 404
+L++E C ++ + M G
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNKTG 493
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 112/300 (37%), Gaps = 37/300 (12%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK L+ + +P+ Y +I CK+ + E L M P
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
++ TY T+I G C AG AY L+ M G PN+ +A D LC+
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMR-------------------- 297
G + VTYT LIQ C+++ N+AL RM
Sbjct: 452 NKAFSCG-LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 298 ---------------AFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDC 341
+ G + T ++I C +G ++ A + + HG V
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 570
Query: 342 YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
Y SL+ L + ++EA KL+ ++ L P + L E C ++ + LL+ ++
Sbjct: 571 YGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD 630
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 6/242 (2%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK+++ A A +L K G D V Y ++I+ CK+ D+ M+ +
Sbjct: 438 LCKKSR-APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D+ +I C + +++ L + + G P +++ C+ G
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G C P+ TY SLI C++S +EA + + M G VT TL C
Sbjct: 557 HNMKRHG-CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPD--TL 375
+ A L++ L + + +LV L K++ A F++LL + D TL
Sbjct: 616 RNDSANAMILLEPLDKK--LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 673
Query: 376 AS 377
A+
Sbjct: 674 AA 675
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 5/294 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ ++ D AL++ +M G +P+ V+YN +I CK V+ LL M P
Sbjct: 161 FCRGDRVYD-ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGP 219
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D++TY ++I GLC++GR DA ++ M P++ +A+ D + G
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ P++VTY+ LI C S+ +EA + M + GC + VT LI+ C
Sbjct: 280 EEMIRR-SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
VE +L ++ + GV Y+ L+ R +L AE++FR ++ + P+ +
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEA 430
++LL LC ++ +L M+ G G+C+ +A+A
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNG--MDADIVTYNIIIRGMCKAGEVADA 450
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 2/274 (0%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
F +L + + DV +++ +M+ G + N+++ C+ + + L +M
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
P ++T+ +++ G C R DA + M G PN+V+ + I DGLC+S
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
K G P+VVTY SLI C +W++A ++ M + T L
Sbjct: 204 NALDLLNRMEKDG-IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
ID+ +G V EA ++++ + YS L+ L RL+EAE++F +++
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 371 KPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
PD + S+L+ C +V G L M G
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 132/325 (40%), Gaps = 45/325 (13%)
Query: 89 GYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGC---VVTVNMFREVLKLCKEAQLA 145
GY+ + +Y L + DL+ E +G VVT N + LC + +
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL--ISGLCSSGRWS 238
Query: 146 DVALWV--LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYI 203
D V + K E + PD +N +I C K+G V E+ EM PD++TY
Sbjct: 239 DATRMVSCMTKREIY---PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 204 TMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKS 263
+I GLC R ++A + M GC P++V S + +G C+S +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 264 GDCR----------------------------------PNVVTYTSLIQSFCERSQWNEA 289
G R PN++TY L+ C+ + +A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVIS 348
L +L M+ G A+ VT +I +C G V +A+ + L G+ Y+++++
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 349 LIRIKRLEEAEKLFRELLAGELKPD 373
L + EA+ LFR++ + P+
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPN 500
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL +L KME+ +PD V+Y+ +I CK G + L EM P++ TY MI+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G C+ GR DA LL+DM +P+++ +A+ + G
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IF 398
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P+ VTY S+I FC+ +++++A ++ D M + + VT T+ID C V+E +L
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 328 VDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+ ++ G V+ Y++L+ + L A+ LF+E+++ + PDT+ ++LL C
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 387 KDRVLDGFYLLDAME 401
+++ + L + ++
Sbjct: 515 NEKLEEALELFEVIQ 529
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 10/297 (3%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ + +M + G P + +N +I C +G V L+ +M D++TY T++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G+C G + A +LL M P++V+ SAI D LC+ G + G
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IA 328
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PNV TY +I FC +W++A +L M + +T LI + +G + EA +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 328 VDKLVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
D+++ H + D Y+S++ + R ++A+ +F +L+A PD + + ++ C
Sbjct: 389 CDEML-HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS---PDVVTFNTIIDVYC 443
Query: 386 MKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
RV +G LL + G G C+ ++L A L + M+ V
Sbjct: 444 RAKRVDEGMQLLREISRRG--LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C + +D A +LR M + PD + +N +I K+G + EKL EM P
Sbjct: 341 FCSFGRWSD-AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D +TY +MI G C R +DA + M SP++V + I D CR+
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G N TY +LI FCE N A ++ M + G + +T L+ C+
Sbjct: 456 REISRRG-LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
+EEA L + + + Y+ ++ + + +++EA LF L ++PD
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMG 404
++++ C K + D L M++ G
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 140/345 (40%), Gaps = 28/345 (8%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
DVA+ + RKME + +N++I+ C + +++ PD++T+ T+
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 206 IEGLCNAGRPEDAYSL--------------LKDMRVH-GCSPNLVVLSAIFDGLCRSGSX 250
+ GLC R +A +L L D V G +P ++ + + +GLC G
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 251 XXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT 310
G +VVTY +++ C+ ALN+L +M + V
Sbjct: 243 LEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGE 369
+ID LC G +A L +++E G++ Y+ ++ R +A++L R+++ E
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 370 LKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAE 429
+ PD L + L+ + ++ + L D M + G C+ N +
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEM--LHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 430 ATKLAKIMLKKSVLL---------RPPYQDSAIDILRKSEEKDLV 465
A + +M V+ R D + +LR+ + LV
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 7/246 (2%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
VVT N +V C+ A+ D + +LR++ G +T YN +I C+ ++ +
Sbjct: 432 VVTFNTIIDVY--CR-AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
L +EM CPD IT ++ G C + E+A L + +++ + V + I G+C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
+ GS P+V TY +I FC +S ++A + +M+ G ++
Sbjct: 549 K-GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLI--RIKRLEEAEKLFR 363
T TLI G ++++ L+ ++ +G S GD ++ + I R+ E E R
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFS-GDAFTIKMAEEIICRVSDEEIIENYLR 666
Query: 364 ELLAGE 369
+ GE
Sbjct: 667 PKINGE 672
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 19/245 (7%)
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
RP+ A SL + M + N+ + + C K G +P+VVT+
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG-FQPDVVTF 179
Query: 274 TSLIQSFCERSQWNEALNVL---------------DRMRAFGCLANHVTAFTLIDSLCDK 318
+L+ C + +EAL + D+M G +T TLI+ LC +
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 319 GCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
G V EA LV+K+V G+ Y ++V + ++ + A L ++ +KPD +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIM 437
S ++ LC D YL M G G C ++A +L + M
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGI--APNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 438 LKKSV 442
+++ +
Sbjct: 358 IEREI 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 85/196 (43%), Gaps = 4/196 (2%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L+ G V + ++ E + A + ++M G PDT+ N+++ C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
+ +E +L + +S D + Y +I G+C + ++A+ L + +HG P++
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+ + G C + +G P+ TY +LI+ + + ++++ ++
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 296 MRAFGCLANHVTAFTL 311
MR+ G + AFT+
Sbjct: 633 MRSNGFSGD---AFTI 645
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL +L KME+ +PD V+Y+ +I CK G + L EM P++ TY MI+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G C+ GR DA LL+DM +P+++ +A+ + G
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IF 398
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P+ VTY S+I FC+ +++++A ++ D M + + VT T+ID C V+E +L
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 328 VDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+ ++ G V+ Y++L+ + L A+ LF+E+++ + PDT+ ++LL C
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 387 KDRVLDGFYLLDAME 401
+++ + L + ++
Sbjct: 515 NEKLEEALELFEVIQ 529
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 10/297 (3%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ + +M + G P + +N +I C +G V L+ +M D++TY T++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G+C G + A +LL M P++V+ SAI D LC+ G + G
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IA 328
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PNV TY +I FC +W++A +L M + +T LI + +G + EA +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 328 VDKLVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
D+++ H + D Y+S++ + R ++A+ +F +L+A PD + + ++ C
Sbjct: 389 CDEML-HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS---PDVVTFNTIIDVYC 443
Query: 386 MKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
RV +G LL + G G C+ ++L A L + M+ V
Sbjct: 444 RAKRVDEGMQLLREISRRG--LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C + +D A +LR M + PD + +N +I K+G + EKL EM P
Sbjct: 341 FCSFGRWSD-AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D +TY +MI G C R +DA + M SP++V + I D CR+
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G N TY +LI FCE N A ++ M + G + +T L+ C+
Sbjct: 456 REISRRG-LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
+EEA L + + + Y+ ++ + + +++EA LF L ++PD
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMG 404
++++ C K + D L M++ G
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 140/345 (40%), Gaps = 28/345 (8%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
DVA+ + RKME + +N++I+ C + +++ PD++T+ T+
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 206 IEGLCNAGRPEDAYSL--------------LKDMRVH-GCSPNLVVLSAIFDGLCRSGSX 250
+ GLC R +A +L L D V G +P ++ + + +GLC G
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 251 XXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT 310
G +VVTY +++ C+ ALN+L +M + V
Sbjct: 243 LEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGE 369
+ID LC G +A L +++E G++ Y+ ++ R +A++L R+++ E
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 370 LKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAE 429
+ PD L + L+ + ++ + L D M + G C+ N +
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEM--LHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 430 ATKLAKIMLKKSVLL---------RPPYQDSAIDILRKSEEKDLV 465
A + +M V+ R D + +LR+ + LV
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 9/243 (3%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
VVT N +V C+ A+ D + +LR++ G +T YN +I C+ ++ +
Sbjct: 432 VVTFNTIIDVY--CR-AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
L +EM CPD IT ++ G C + E+A L + +++ + V + I G+C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
+ GS P+V TY +I FC +S ++A + +M+ G ++
Sbjct: 549 K-GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYS-SLVISLIRIKRLEEAEKLFRE 364
T TLI G ++++ L+ ++ +G S GD ++ +V LI RL +K F +
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFS-GDAFTIKMVADLITDGRL---DKSFSD 663
Query: 365 LLA 367
+L+
Sbjct: 664 MLS 666
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L+ G V + ++ E + A + ++M G PDT+ N+++ C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
+ +E +L + +S D + Y +I G+C + ++A+ L + +HG P++
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+ + G C + +G P+ TY +LI+ + + ++++ ++
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 296 MRAFGCLANHVTAFTLIDSLCD 317
MR+ G + T + D + D
Sbjct: 633 MRSNGFSGDAFTIKMVADLITD 654
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 19/245 (7%)
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
RP+ A SL + M + N+ + + C K G +P+VVT+
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG-FQPDVVTF 179
Query: 274 TSLIQSFCERSQWNEALNVL---------------DRMRAFGCLANHVTAFTLIDSLCDK 318
+L+ C + +EAL + D+M G +T TLI+ LC +
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 319 GCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
G V EA LV+K+V G+ Y ++V + ++ + A L ++ +KPD +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIM 437
S ++ LC D YL M G G C ++A +L + M
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKG--IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 438 LKKSV 442
+++ +
Sbjct: 358 IEREI 362
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 191/499 (38%), Gaps = 81/499 (16%)
Query: 45 SVENSLSKIKPKLDSQCVIQVVSRC-CPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSL 103
S+ NS KI P Q+ P + F W G Q+GYRHS +Y+
Sbjct: 68 SLRNSFHKITP-------FQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGK 120
Query: 104 LGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMED-FGSRP 162
LG + + I L+ + EG V ++F +++ +A ++ +M + + P
Sbjct: 121 LGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEP 180
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
YNVV+ + ++ + +M P L T+ +++ C + A SLL
Sbjct: 181 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLL 240
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+DM HGC PN V+ + L + G C P+ T+ +I C+
Sbjct: 241 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG-CVPDAETFNDVILGLCK 299
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA----YR-----------L 327
+ NEA +++RM G + +T L++ LC G V+ A YR L
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 328 VDKLVEHG-------------VSYGDC--------------------------------- 341
+ V HG SYG
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 342 -------YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGF 394
Y+ LV ++ +++EA + E+ A LKP+T+ + L+ C + R+ +
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 395 YLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAID 454
+ M GC GLC+ + + A L + M+ + V+ ++ I+
Sbjct: 480 EIFREMPRKGC--KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 455 -ILRKSEEKDLVDLVNQLT 472
LR+ E K+ LVN++
Sbjct: 538 AFLRRGEIKEARKLVNEMV 556
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 5/263 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CK ++ D A VL +M G +P+TV +N +I CK+ + ++ REM P
Sbjct: 434 FCKLGKI-DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D+ T+ ++I GLC + A LL+DM G N V + + + R G
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
G + +TY SLI+ C + ++A ++ ++M G ++++ LI+ LC
Sbjct: 553 NEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
G VEEA ++V G S D ++SL+ L R R+E+ +FR+L A + PDT+
Sbjct: 612 SGMVEEAVEFQKEMVLRG-STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Query: 376 ASSLLLKELCMKDRVLDGFYLLD 398
+ L+ LC V D LLD
Sbjct: 671 TFNTLMSWLCKGGFVYDACLLLD 693
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 147/349 (42%), Gaps = 7/349 (2%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L+ GCV +++ ++ + + AL +L +M G PD +N VI C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
K + K++ M + PD ITY ++ GLC GR + A KD+ P +V
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIV 354
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+ + + G G S P+V TY SLI + + AL VL
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 296 MRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKR 354
MR GC N + L+D C G ++EAY +++++ G+ ++ L+ + + R
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 355 LEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXX 414
+ EA ++FRE+ KPD + L+ LC D + +LL M + G
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV--VANTVTY 532
Query: 415 XXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKSEEKD 463
++ + EA KL M+ + L +S I L ++ E D
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 124/250 (49%), Gaps = 3/250 (1%)
Query: 108 RNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMY 167
R P+ + ++ +GC V F ++ E ALW+LR M G +TV Y
Sbjct: 474 RIPEAV-EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 168 NVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRV 227
N +I ++G+++ KL+ EM + D ITY ++I+GLC AG + A SL + M
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 228 HGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWN 287
G +P+ + + + +GLCRSG G P++VT+ SLI C +
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST-PDIVTFNSLINGLCRAGRIE 651
Query: 288 EALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLV 346
+ L + +++A G + VT TL+ LC G V +A L+D+ +E G V +S L+
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Query: 347 ISLIRIKRLE 356
S+I + L+
Sbjct: 712 QSIIPQETLD 721
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 5/300 (1%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTV 165
+D ++ D++ SY G V V + ++ + L +AL VL M + G +P+
Sbjct: 369 LDDAKAVLSDMVTSY---GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY 425
Query: 166 MYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDM 225
Y +++ CK G ++ +L EMS P+ + + +I C R +A + ++M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 226 RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQ 285
GC P++ +++ GLC G N VTY +LI +F R +
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG-VVANTVTYNTLINAFLRRGE 544
Query: 286 WNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSL 345
EA +++ M G + +T +LI LC G V++A L +K++ G + + ++
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 346 VIS-LIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+I+ L R +EEA + +E++ PD + + L+ LC R+ DG + ++ G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 182/460 (39%), Gaps = 46/460 (10%)
Query: 20 PFSSQKMGMASLADTLYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVR 79
P+ SQ + + + ++ S+L +G L K+ P S + R P +
Sbjct: 84 PWVSQILNLLDGSASMESNL---DGFCRKFLIKLSPNFVSFVLKSDEIREKP---DIAWS 137
Query: 80 FFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLC 139
FF W+ Q Y H+ Y +L + ++ I + + +TV+ ++K
Sbjct: 138 FFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSF 197
Query: 140 KEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDL 199
+ + + LWV RKM++ G P YN ++ V+ E++ M PD+
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDI 257
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVV----------------------- 236
+TY TMI+G C AG+ + A L+DM G + +
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 237 ------------LSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
S + GLC+ G + G +PNV YT LI + +
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYAKSG 376
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YS 343
+A+ +L RM G + VT +++ LC G VEEA G++ YS
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM-EN 402
SL+ L + R++EAE+LF E+ D+ + L+ +V + L M E
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Query: 403 MGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
GC G+ +++ EA KL +M+ K +
Sbjct: 497 EGC--DQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGI 534
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 6/292 (2%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
L + + +G V + F V+ LCKE +L + V M GS+P+ +Y V+I
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNE-GYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
K G VE +LL M PD++TY ++ GLC GR E+A R G + N
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+ S++ DGL ++G + G C + Y +LI +F + + +EA+ +
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKG-CTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 295 RM-RAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS-YGDCYSSLVISLIRI 352
RM GC T L+ + + EEA +L D +++ G++ C+ +L L
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++ A K+ EL + D A ++ LC R+ + L D + G
Sbjct: 552 GKVARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERG 602
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 107/275 (38%), Gaps = 47/275 (17%)
Query: 123 EGCVVTVNMFREVLK------------LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
EG V NM R+ K K + D A+ +L +M D G +PD V Y+VV
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVED-AIRLLHRMIDEGFKPDVVTYSVV 403
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
+ CK G VE + + Y ++I+GL AGR ++A L ++M GC
Sbjct: 404 VNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
+ + +A+ D + + C V TYT L+ + + EAL
Sbjct: 464 TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Query: 291 NVLDRM------------RAFG---CLANHVTAF-------------------TLIDSLC 316
+ D M RA CL+ V +I++LC
Sbjct: 524 KLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLC 583
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIR 351
G ++EA +L D + E G +++I+ +R
Sbjct: 584 KAGRIKEACKLADGITERGREVPGRIRTVMINALR 618
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 137/294 (46%), Gaps = 2/294 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ +LR+M PD YN VIR C+ ++E +L EM S L+T+ +I+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
C AG+ ++A LK+M+ G +LVV +++ G C G + GD
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS- 279
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P +TY +LI+ FC+ Q EA + + M G N T LID LC G +EA +L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 328 VDKLVEHGVSYGDCYSSLVIS-LIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
++ ++E +++I+ L + + +A ++ + +PD + ++LL LC
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 387 KDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKK 440
K + + LL M GLC++N L +A + ++++K
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 4/300 (1%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A VL M G + +N++++ C+ + LLREM + PD+ +Y T+I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G C E A L +M+ GCS +LV + D C++G G
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG-LE 244
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
++V YTSLI+ FC+ + + + D + G +T TLI C G ++EA +
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 328 VDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+ ++E GV Y+ L+ L + + +EA +L ++ + +P+ + ++++ +LC
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 387 KDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRP 446
V D +++ M+ GLC K L EA+KL +MLK S P
Sbjct: 365 DGLVADAVEIVELMKKR--RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 7/248 (2%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CK ++ D A+ L++M+ G D V+Y +IR C G+++ G+ L E+ P
Sbjct: 222 FCKAGKM-DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
ITY T+I G C G+ ++A + + M G PN+ + + DGLC G
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ D PN VTY +I C+ +A+ +++ M+ +++T L+ LC
Sbjct: 341 NLMIEK-DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD----CYSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
KG ++EA +L+ L+ SY D Y++L+ L + RL +A ++ L+ D
Sbjct: 400 KGDLDEASKLL-YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 374 TLASSLLL 381
+ +++LL
Sbjct: 459 RVTTNILL 466
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 5/268 (1%)
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
E + + AL + +M+ G V + ++I CK G ++ L+EM DL+
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXX 260
Y ++I G C+ G + +L ++ G SP + + + G C+ G
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 261 XKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGC 320
+ G RPNV TYT LI C + EAL +L+ M N VT +I+ LC G
Sbjct: 309 IERG-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 321 VEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELL--AGELKPDTLAS 377
V +A +V+ + + + Y+ L+ L L+EA KL +L + PD ++
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 378 SLLLKELCMKDRVLDGFYLLDAM-ENMG 404
+ L+ LC ++R+ + D + E +G
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLG 455
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 6/298 (2%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTV 165
+DR + +++E ++ C +T N + CK QL + A + M + G RP+
Sbjct: 263 LDRGKALFDEVLERGDSP-CAITYNTL--IRGFCKLGQLKE-ASEIFEFMIERGVRPNVY 318
Query: 166 MYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDM 225
Y +I C G + +LL M D P+ +TY +I LC G DA +++ M
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 226 RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK-SGDCRPNVVTYTSLIQSFCERS 284
+ P+ + + + GLC G K S P+V++Y +LI C+ +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYS 343
+ ++AL++ D + + VT L++S G V +A L ++ + V D Y+
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
+++ + L A+ L ++ EL+P + LL LC + + + L + M+
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 140/331 (42%), Gaps = 49/331 (14%)
Query: 87 QSGYRHSAYMYRK-ASSLLGIDRNPQ--MICDLIESYEAEGCVVTVNMFREVLKLCKEAQ 143
+ G R + Y Y L G+ + + + +L+ + E VT N+ + KLCK+
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII--INKLCKDGL 367
Query: 144 LADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL----REMSLSDACPDL 199
+AD A+ ++ M+ +RPD + YN+++ C KGD++ KLL ++ S +D PD+
Sbjct: 368 VAD-AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD--PDV 424
Query: 200 ITYITMIEGLCN-----------------------------------AGRPEDAYSLLKD 224
I+Y +I GLC AG A L K
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
+ N +A+ DG C++G + + +P+V Y L+ S C+
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTG-MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYS 343
++A + + M+ + V+ +ID G ++ A L+ + G+S YS
Sbjct: 544 SLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYS 603
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
L+ +++ L+EA F +++ +PD
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 142/329 (43%), Gaps = 37/329 (11%)
Query: 74 CQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFR 133
+L RFF+W+G Q +RH+ Y + + + L++ +G T F
Sbjct: 129 AKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFN 188
Query: 134 EVLKLCKEAQLADVAL-----------------------------------WVLRKMEDF 158
++ C EA LA A+ WV ++M +
Sbjct: 189 LLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED 248
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G PD + YN+++ + G ++ ++L EM+ PD TY ++ L +P A
Sbjct: 249 GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAA 308
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
+ L M+ G P+++ + + DGL R+G+ K+G CRP+VV YT +I
Sbjct: 309 LTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAG-CRPDVVCYTVMIT 367
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
+ + ++A + M G L N T ++I LC G EA L+ ++ G +
Sbjct: 368 GYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNP 427
Query: 339 GD-CYSSLVISLIRIKRLEEAEKLFRELL 366
YS+LV L + +L EA K+ RE++
Sbjct: 428 NFVVYSTLVSYLRKAGKLSEARKVIREMV 456
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 139/358 (38%), Gaps = 80/358 (22%)
Query: 67 SRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCV 126
+RC +L +FF+W G Q +RH+A Y + + +C LI+ +G
Sbjct: 129 TRCA----KLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYP 184
Query: 127 VTVNMFREVLKLCKEAQLA-DVAL----------------------------------WV 151
T F ++ C EA LA DV WV
Sbjct: 185 TTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWV 244
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
+M + G PD + YN+V+ + G + +LL EM PDL TY ++ L
Sbjct: 245 YEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLAT 304
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR---- 267
+P A +LL MR G P ++ + + DGL R+G K G C
Sbjct: 305 GNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG-CTPDVV 363
Query: 268 -------------------------------PNVVTYTSLIQSFCERSQWNEALNVLDRM 296
PNV TY S+I+ FC ++ EA +L M
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 297 RAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKR 354
+ GC N V TL+++L + G V EA+ +V +VE G Y L+ L + +R
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG-----HYVHLISKLKKYRR 476
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 7/291 (2%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+I +++G + + +L +C E + ++V LR+M++ G PD+V YN++IR C
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCNEGRASEV----LREMKEIGLVPDSVSYNILIRGC 337
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
GD+EM EM P TY T+I GL + E A L++++R G +
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
V + + +G C+ G G +P TYTSLI C +++ EA + +
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDG-IQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIK 353
++ G + V TL+D C G ++ A+ L+ ++ ++ D Y+ L+ L
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ EEA +L E+ +KPD ++ + L+ K F + D M ++G
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 144/323 (44%), Gaps = 10/323 (3%)
Query: 121 EAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
E + V T N+ VL CKE +L A L ME FG +P V YN +++ +G +
Sbjct: 220 EIKSNVYTFNIMINVL--CKEGKLKK-AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
E ++ EM PD+ TY ++ +CN GR A +L++M+ G P+ V + +
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNIL 333
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
G +G K G P TY +LI ++ A ++ +R G
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMV-PTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAE 359
+ + VT LI+ C G ++A+ L D+++ G+ Y+SL+ L R + EA+
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 360 KLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXX 419
+LF +++ +KPD + + L+ C + F LL M+ M
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI--NPDDVTYNCLMR 510
Query: 420 GLCQKNHLAEATKLAKIMLKKSV 442
GLC + EA +L M ++ +
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGI 533
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G +P Y +I + C+K ++L ++ PDL+ T+++G C G + A
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
+SLLK+M + +P+ V + + GLC G + G +P+ ++Y +LI
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG-IKPDHISYNTLIS 545
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
+ ++ A V D M + G +T L+ L E A L+ ++ G+
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 339 GD 340
D
Sbjct: 606 ND 607
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A +L++M+ PD V YN ++R C +G E +L+ EM PD I+Y T+
Sbjct: 484 DRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I G G + A+ + +M G +P L+ +A+ GL ++ KS
Sbjct: 544 ISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN-QEGELAEELLREMKSEG 602
Query: 266 CRPNVVTYTSLIQS 279
PN ++ S+I++
Sbjct: 603 IVPNDSSFCSVIEA 616
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 169/373 (45%), Gaps = 5/373 (1%)
Query: 33 DTLYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRH 92
D + + SV + L+K++ ++ V +V+ + +FF WAG Q GY+H
Sbjct: 100 DAFRKNRNHWGPSVVSELNKLR-RVTPSIVAEVLK--LGNDAAVAAKFFHWAGKQKGYKH 156
Query: 93 SAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVL 152
Y + L + + + L E +++G + F ++++ + + +V
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 153 RKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA 212
KM+ FG +P +YN ++ K G ++ + + + T++ +++GLC A
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 213 GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVT 272
GR E+ +L+ MR + C P++ +A+ L G+ + + +P+V+
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRD-EIKPDVMA 335
Query: 273 YTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV 332
Y +L+ C+ + + M+ L + LI+ G V A L + LV
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLV 395
Query: 333 EHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVL 391
+ G ++ Y++++ L + ++++A KLF+ + EL+PD S ++ + +R+
Sbjct: 396 DSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLS 455
Query: 392 DGFYLLDAMENMG 404
D +L+ + +G
Sbjct: 456 DFSNVLERIGELG 468
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 172/438 (39%), Gaps = 47/438 (10%)
Query: 46 VENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLG 105
+E +L + P L + V+ +Q LG RFFIWA + S + +L
Sbjct: 47 IEPALEPLVPFLSKNIITSVIKDEVNRQ--LGFRFFIWAS-RRERLRSRESFGLVIDMLS 103
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTV 165
D + +E ++ G V F ++ + +A+ A+ +M++F RPD
Sbjct: 104 EDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVF 163
Query: 166 MYNVVIRLCC------------------------------------KKGDVEMGEKLLRE 189
YNV++R+ KKG +K+ +
Sbjct: 164 TYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDD 223
Query: 190 MSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGS 249
M+ P+ +TY +I GLC G +DA L +M+ G P+ V +A+ DG C+ G
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 250 XXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAF 309
K G + Y+SLI ++ +A + M + +
Sbjct: 284 MVEAFELLRLFEKDGFVL-GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYT 342
Query: 310 TLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAG 368
LI L G +E+A +L+ + G+S CY++++ +L LEE L E+
Sbjct: 343 ILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET 402
Query: 369 ELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLA 428
E PD ++L+ +C V + + +E GC GLC+ L
Sbjct: 403 ESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC--SPSVATFNALIDGLCKSGELK 460
Query: 429 EATKLAKIMLKKSVLLRP 446
E A+++L K + RP
Sbjct: 461 E----ARLLLHKMEVGRP 474
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%)
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
L D GS PD V YNV+I C+ GD++ KLL + L PD +TY T+I GL
Sbjct: 505 LAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHR 564
Query: 212 AGRPEDAYSLL 222
GR E+A+ L
Sbjct: 565 VGREEEAFKLF 575
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 120/288 (41%), Gaps = 23/288 (7%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMY------ 167
++ E GC +V F ++ LCK +L + L +L KME RP ++
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARL-LLHKME--VGRPASLFLRLSHSG 485
Query: 168 NVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRV 227
N + G + + L + + + PD+++Y +I G C AG + A LL +++
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 228 HGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWN 287
G SP+ V + + +GL R G D R + Y SL+ C + +
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLFYA---KDDFRHSPAVYRSLMTWSCRKRKVL 602
Query: 288 EALNV-LDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC----Y 342
A N+ + ++ CL + I+ +G E A R +L+E + Y
Sbjct: 603 VAFNLWMKYLKKISCLDDETA--NEIEQCFKEGETERALR---RLIELDTRKDELTLGPY 657
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
+ +I L + R EA +F L ++ + L+ LC ++++
Sbjct: 658 TIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQL 705
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 3/264 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
C ++ D A+ + ++ G +P+ V Y +IR CK + +L +M + + P+
Sbjct: 164 CHWNRIED-AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
++TY ++ GLC GR DA LL+DM PN++ +A+ D + G
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
+ P+V TY SLI C +EA + M GC N V TLI C
Sbjct: 283 VMIQM-SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 319 GCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
VE+ ++ ++ + GV Y+ L+ + R + A+++F ++ + PD
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 378 SLLLKELCMKDRVLDGFYLLDAME 401
++LL LC +V + + M
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMR 425
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 8/320 (2%)
Query: 89 GYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGC---VVTVNMFREVLKLCKEAQLA 145
G++ + Y L +R+ +L G VVT N V LC+ +
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL--VTGLCEIGRWG 240
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A W+LR M P+ + + +I K G + ++L M PD+ TY ++
Sbjct: 241 DAA-WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I GLC G ++A + M +GC PN V+ + + G C+S + G
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG- 358
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
N +TYT LIQ +C + + A V ++M + + T L+D LC G VE+A
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 326 RLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
+ + + + + Y+ ++ + ++ ++E+A LF L + +KP+ + + ++
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 385 CMKDRVLDGFYLLDAMENMG 404
C + + + L M+ G
Sbjct: 479 CRRGLIHEADSLFKKMKEDG 498
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 134/307 (43%), Gaps = 5/307 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK L + A+ + +M GSRP+ V YN ++ C+ G LLR+M P
Sbjct: 198 LCKNRHL-NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
++IT+ +I+ G+ +A L M P++ ++ +GLC G
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G C PN V YT+LI FC+ + + + + M G +AN +T LI C
Sbjct: 317 YLMERNG-CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 318 KGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G + A + +++ Y+ L+ L ++E+A +F + E+ + +
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
+++++ +C +V D F L ++ + G G C++ + EA L K
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKG--MKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 437 MLKKSVL 443
M + L
Sbjct: 494 MKEDGFL 500
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 121 EAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGD 179
E GC ++ ++ CK ++ D + + +M G +T+ Y V+I+ C G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVED-GMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 180 VEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSA 239
++ +++ +MS A PD+ TY +++GLC G+ E A + + MR N+V +
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 240 IFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAF 299
I G+C+ G G +PNV+TYT++I FC R +EA ++ +M+
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKG-MKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 300 GCLAN 304
G L N
Sbjct: 498 GFLPN 502
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 10/316 (3%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+R++L+ + AL + +M P + + ++ + K ++ L +M
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
+ P L T ++ +C + +P A L M G P+LV +++ +G C
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
G +PNVVTYT+LI+ C+ N A+ + ++M G N VT L
Sbjct: 171 DAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
+ LC+ G +A L+ +++ + +++L+ + +++ +L EA++L+ ++ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 371 KPDTLASSLLLKELCMK---DRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHL 427
PD L+ LCM D FYL ME GC G C+ +
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYL---MERNGC--YPNEVIYTTLIHGFCKSKRV 344
Query: 428 AEATKLAKIMLKKSVL 443
+ K+ M +K V+
Sbjct: 345 EDGMKIFYEMSQKGVV 360
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 36/285 (12%)
Query: 156 EDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRP 215
E FG P+ N++++ CKK D+E K+L E+ P+L+TY T++ G G
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 216 EDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTS 275
E A +L++M G P+ + + DG C+ G K+ + PN VTY
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKN-EIEPNEVTYGV 301
Query: 276 LIQSFCERSQWNEALNVLDRM--RAF---------------------------------G 300
+I++ C+ + EA N+ D M R+F
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEK 360
C+ ++ TLI LC +G V EA +L D+ + + Y++L+ + L EA +
Sbjct: 362 CMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 361 LFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
L+ ++ + KP+ ++L++ L V +G +L+ M +GC
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 113/274 (41%), Gaps = 22/274 (8%)
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR 172
+ D +E E E VT + + LCKE + + A + +M + PD+ + VI
Sbjct: 283 VMDDMEKNEIEPNEVTYGVM--IRALCKEKKSGE-ARNMFDEMLERSFMPDSSLCCKVID 339
Query: 173 LCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSP 232
C+ V+ L R+M ++ PD T+I LC GR +A L + G P
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIP 398
Query: 233 NLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNV 292
+L+ + + G+C G + C+PN TY LI+ + E + V
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYER-KCKPNAFTYNVLIEGLSKNGNVKEGVRV 457
Query: 293 LDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRI 352
L+ M GC N T L + L G E+A ++V V +G
Sbjct: 458 LEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG----------------- 500
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
K +E+ +LF + AGEL L LL E+ +
Sbjct: 501 KVDKESWELFLKKFAGELDKGVLPLKELLHEISV 534
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 4/251 (1%)
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
L +++FG +PD YN++I C + G + KL EM P +T+ T+I GLC
Sbjct: 141 LSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 212 AGRPEDAYSLLKDM-RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
R ++A + DM +V+G P + + +++ LC+ G + G + +
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE-GKIKVDA 258
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
Y++LI S + + NE +L+ M GC + VT LI+ C + E A R++D+
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDE 318
Query: 331 LVEHGVSYGDCYSSLVISL-IRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
+VE G+ ++++ + RIK+ EEA LF ++ PDTL+ ++ LC +
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 390 VLDGFYLLDAM 400
+ +LD M
Sbjct: 379 FEEAAVILDEM 389
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 3/261 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK++++ + ++ +G RP +Y +I+ C+ G++ KL E
Sbjct: 197 LCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV 256
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D Y T+I L AGR + +L++M GC P+ V + + +G C
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G +P+V++Y ++ F +W EA + + M GC + ++ + D LC+
Sbjct: 317 DEMVEKG-LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE 375
Query: 318 KGCVEEAYRLVDKLVEHGVS-YGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
EEA ++D+++ G D + L +LE K+ L G + D
Sbjct: 376 GLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRG-IAGDADV 434
Query: 377 SSLLLKELCMKDRVLDGFYLL 397
S+++ +C + + D LL
Sbjct: 435 WSVMIPTMCKEPVISDSIDLL 455
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 118 ESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKK 177
E+YE + V + L K + +V++ +L +M + G +PDTV YNV+I C +
Sbjct: 248 EAYEGKIKVDAAIYSTLISSLIKAGRSNEVSM-ILEEMSEKGCKPDTVTYNVLINGFCVE 306
Query: 178 GDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVL 237
D E ++L EM PD+I+Y ++ + E+A L +DM GCSP+ +
Sbjct: 307 NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Query: 238 SAIFDGLC 245
+FDGLC
Sbjct: 367 RIVFDGLC 374
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVL-DRMRAFGCLAN-HVTAFTLIDSLCDKGCVEEA 324
+P VT+ +LI C+ S+ EAL + D ++ +G H+ A +LI +LC G + A
Sbjct: 184 KPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYA-SLIKALCQIGELSFA 242
Query: 325 YRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
++L D+ E + YS+L+ SLI+ R E + E+ KPDT+ ++L+
Sbjct: 243 FKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLING 302
Query: 384 LCMKDRVLDGFYLLDAMENMG 404
C+++ +LD M G
Sbjct: 303 FCVENDSESANRVLDEMVEKG 323
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 2/265 (0%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
+ G V V+++ + + C + L +L +M G +P+ +Y + I C+ +E
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
EK+ M P+L TY MI+G C G AY L K++ V PN+VV +
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
DG C++ K G PN+ Y LI C+ EA+ +L M +
Sbjct: 312 DGFCKARELVTARSLFVHMVKFG-VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 302 LANHVTAFTLIDSLCDKGCVEEAYRLVDKLV-EHGVSYGDCYSSLVISLIRIKRLEEAEK 360
+ T LI+ LC + V EA RL K+ E Y+SL+ + +E+A
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 361 LFRELLAGELKPDTLASSLLLKELC 385
L E+ A ++P+ + S L+ C
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYC 455
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 3/246 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC E Q+A+ A + +KM++ P + YN +I CK+ ++E L EM+ S P
Sbjct: 384 LCIEDQVAE-ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
++IT+ T+I+G CN + A L +M + G P++V +A+ D + +
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G PN T+ L+ F + + + A++ NHV LI+ LC
Sbjct: 503 SDMLEAG-IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G + A R + G++ C Y S++ ++ KR+ + L +++ + P+ L
Sbjct: 562 NGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Query: 377 SSLLLK 382
+ LL +
Sbjct: 622 NQLLAR 627
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 38/257 (14%)
Query: 148 ALWV-LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
++WV + M G PD +Y V+ + C K+G EKLL EM+ P++ Y I
Sbjct: 182 SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYI 241
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
LC + E+A + + M+ HG PNL
Sbjct: 242 LDLCRDNKMEEAEKMFELMKKHGVLPNLY------------------------------- 270
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYR 326
TY+++I +C+ +A + + L N V TL+D C + A
Sbjct: 271 -----TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARS 325
Query: 327 LVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
L +V+ GV Y+ L+ + + EA L E+ + L PD ++L+ LC
Sbjct: 326 LFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLC 385
Query: 386 MKDRVLDGFYLLDAMEN 402
++D+V + L M+N
Sbjct: 386 IEDQVAEANRLFQKMKN 402
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 17/344 (4%)
Query: 137 KLCKEAQLADVALWVLRKMEDFGSRPDTV-MYNVVIRLCCKKGDVEMGEKLLREMSLSDA 195
+L + ++ ++++ + +ED S ++ +++++I + G E + REM S
Sbjct: 104 RLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS-- 161
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXX 255
PD ++++ GL R + + + M G P++ + +F + G
Sbjct: 162 -PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
G +PNV YT I C ++ EA + + M+ G L N T +ID
Sbjct: 221 LLDEMTSLG-IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 316 CDKGCVEEAYRL-----VDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
C G V +AY L V +L+ + V +G +LV + + L A LF ++ +
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFG----TLVDGFCKARELVTARSLFVHMVKFGV 335
Query: 371 KPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEA 430
P+ + L+ C +L+ LL ME++ GLC ++ +AEA
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN--LSPDVFTYTILINGLCIEDQVAEA 393
Query: 431 TKLAKIMLKKSVLLRPPYQDSAID-ILRKSEEKDLVDLVNQLTG 473
+L + M + + +S I ++ + +DL +++T
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTA 437
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 147/348 (42%), Gaps = 44/348 (12%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
++ L KE + ADV +V ++M +P+ +NVVI CK G + ++ +M +
Sbjct: 195 MIALLKENRSADVE-YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 195 ACPDLITYITMIEGLCNAGRPEDAY---SLLKDMRVHGCSPNLVVLSAIFD--------- 242
P++++Y T+I+G C G Y ++LK+M + SPNL + + D
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 243 --------------------------GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
GLC G +G +PN++TY +L
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG-VQPNLITYNAL 372
Query: 277 IQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG- 335
I FC+ EAL++ ++ G + LID+ C G +++ + L +++ G
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 336 VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFY 395
V Y+ L+ L R +E A+KLF +L + L PD + +L++ C K
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491
Query: 396 LLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
LL M MG G C++ +L AT + M K+ L
Sbjct: 492 LLKEMSKMGL--KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 7/333 (2%)
Query: 115 DLIESYEAEGCVVTVNMFREVL----KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
D++E + GC V + ++ KL ++ A VL++M + P+ +N++
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK-ADAVLKEMVENDVSPNLTTFNIL 302
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
I K ++ K+ +EM D P++I+Y ++I GLCN G+ +A S+ M G
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
PNL+ +A+ +G C++ G P Y LI ++C+ + ++
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV-PTTRMYNMLIDAYCKLGKIDDGF 421
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLI 350
+ + M G + + T LI LC G +E A +L D+L G+ + L+
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYC 481
Query: 351 RIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXX 410
R +A L +E+ LKP L ++++K C + + + ME
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER-RLRMN 540
Query: 411 XXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
G QK L +A L ML+K ++
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
D+ S + +G V T M+ ++ CK ++ D + +ME G PD YN +I
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDD-GFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
C+ G++E +KL +++ S PDL+T+ ++EG C G A LLK+M G P
Sbjct: 446 LCRNGNIEAAKKLFDQLT-SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
+ + + G C+ G+ K R NV +Y L+Q + ++ + +A +L
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEE 323
+ M G + N +T + + + D+G V +
Sbjct: 565 NEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC ++++ A+ + KM G +P+ + YN +I CK ++ + + A P
Sbjct: 341 LCNGGKISE-AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
Y +I+ C G+ +D ++L ++M G P++ + + GLCR+G+
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
G P++VT+ L++ +C + + +A +L M G H+T ++ C
Sbjct: 460 DQLTSKG--LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 318 KGCVEEAYRLVDKL-----VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKP 372
+G ++ A + ++ + V+ Y+ L+ + +LE+A L E+L L P
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVA---SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Query: 373 DTLASSLLLKELCMKDRVLD 392
+ + ++ +E+ + V D
Sbjct: 575 NRITYEIVKEEMVDQGFVPD 594
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 5/341 (1%)
Query: 65 VVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEG 124
+ C QL R A F +G+ + YR L + L +G
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVF-NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 125 CVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGE 184
V ++ ++K + A + +M + G P+ +N+++ CK G V +
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL 244
L++ M PD+ T+ +I G + E+A +L M +G P++ +++ +GL
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 245 CRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLAN 304
C++ + G C PN+ T+ L++S C + +EAL +L+ M+ +
Sbjct: 507 CKTSKFEDVMETYKTMVEKG-CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 305 HVTAFTLIDSLCDKGCVEEAYRLVDKLVE-HGVSYGDCYSSLVISLIRIK-RLEEAEKLF 362
VT TLID C G ++ AY L K+ E + VS +++I K + AEKLF
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 363 RELLAGELKPDTLASSLLLKELCMKDRVLDGF-YLLDAMEN 402
+E++ L PD L++ C V G+ +LL+ MEN
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
V+T N + LCK ++ + ++ L KM + G PD+ YN +I CK G V++ E+
Sbjct: 286 VITYNNL--IYGLCKNSKFQEAEVY-LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
++ + + PD TY ++I+GLC+ G A +L + G PN+++ + + GL
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
G + G P V T+ L+ C+ ++A ++ M + G +
Sbjct: 403 NQGMILEAAQLANEMSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRE 364
T LI + +E A ++D ++++GV Y+SL+ L + + E+ + ++
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 365 LLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
++ P+ ++LL+ LC ++ + LL+ M+N
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 9/317 (2%)
Query: 128 TVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
T N+F + LC+ +L D A+ ++ + + G +PD + YN +I CK + E L
Sbjct: 253 TYNLF--IQGLCQRGEL-DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
+M PD TY T+I G C G + A ++ D +G P+ ++ DGLC
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
G G +PNV+ Y +LI+ + EA + + M G + T
Sbjct: 370 GETNRALALFNEALGKG-IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYS-SLVISLIRIK-RLEEAEKLFREL 365
L++ LC GCV +A LV ++ G + D ++ +++I + ++E A ++ +
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGY-FPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 366 LAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKN 425
L + PD + LL LC + D M GC LC+
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLES--LCRYR 545
Query: 426 HLAEATKLAKIMLKKSV 442
L EA L + M KSV
Sbjct: 546 KLDEALGLLEEMKNKSV 562
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 139/367 (37%), Gaps = 39/367 (10%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
Q ++ E + C TV + ++ + ++ D A V +M D G PD + +
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
++ CK +LL MS +++ Y T++ G + Y L M G
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 231 S-----------------------------------PNLVVLSAIFDGLCRSGSXXXXXX 255
S PNL + GLC+ G
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
+ G +P+V+TY +LI C+ S++ EA L +M G + T TLI
Sbjct: 273 MVGCLIEQGP-KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 316 CDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
C G V+ A R+V V +G V Y SL+ L A LF E L +KP+
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 375 LASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLA 434
+ + L+K L + +L+ L + M G GLC+ +++A L
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKG--LIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 435 KIMLKKS 441
K+M+ K
Sbjct: 450 KVMISKG 456
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 2/296 (0%)
Query: 110 PQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
P L+ + ++GC + V + V+ E + KM G +N
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG 229
++R+ CKKGDV+ EKLL ++ P+L TY I+GLC G + A ++ + G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 230 CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEA 289
P+++ + + GLC++ G P+ TY +LI +C+ A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG-LEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVIS 348
++ G + + T +LID LC +G A L ++ + G+ Y++L+
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 349 LIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L + EA +L E+ L P+ ++L+ LC V D L+ M + G
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL +L M D G PD YN ++ CK E + + M P+L T+ ++E
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
LC + ++A LL++M+ +P+ V + DG C++G ++
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRM--RAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
+ TY +I +F E+ A + M R G + T ++D C G V Y
Sbjct: 600 SSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG--PDGYTYRLMVDGFCKTGNVNLGY 657
Query: 326 RLVDKLVEHGVSYGDCYSSLVISLIRIK-RLEEAEKLFRELLAGELKPDTLAS 377
+ + +++E+G VI+ + ++ R+ EA + ++ L P+ + +
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNT 710
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 138 LCKEAQLADVALWVLRKMED-FGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC 196
CK L D A + RKME+ + T YN++I +K +V M EKL +EM D C
Sbjct: 576 FCKNGDL-DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM--VDRC 632
Query: 197 --PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
PD TY M++G C G Y L +M +G P+L L + + LC
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLC 683
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 151/398 (37%), Gaps = 72/398 (18%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L +G ++ F +L A L A+ + +M ++ +P+ V YNV+I C
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
++GD+ + L+EM+ PD +Y +I GLC G+ +A + + C N +
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSG------------------------------- 264
+ + G CR G + G
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 265 ---DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCV 321
+P+ V YTS+I + + + EA + D M GC+ N VT +I+ LC G V
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 322 EEAYRLVDKL-----VEHGVSYG-------------------------------DCYSSL 345
EA L K+ V + V+YG Y+ L
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNML 793
Query: 346 VISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
+ R R+EEA +L ++ + PD + + ++ ELC ++ V L ++M G
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 406 XXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
G C + +AT+L ML++ ++
Sbjct: 854 --RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 157/357 (43%), Gaps = 47/357 (13%)
Query: 89 GYRHSAYMY----RKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQ 143
G R Y+Y R L + R +MI + EA GC V + + ++ LCK+ +
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM----EATGCDVNIVPYNVLIDGLCKKQK 277
Query: 144 LADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYI 203
+ + A+ + + + +PD V Y ++ CK + E+G +++ EM P
Sbjct: 278 VWE-AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 204 TMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKS 263
+++EGL G+ E+A +L+K + G SPNL V +A+ D LC+ K
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 264 GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM--------------------------R 297
G RPN VTY+ LI FC R + + AL+ L M
Sbjct: 397 G-LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 298 AFGCLANH---------VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVI 347
A G +A VT +L+ C KG + +A RL ++ G++ +++L+
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 348 SLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L R + +A KLF E+ +KP+ + +++++ C + + F L M G
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 145/380 (38%), Gaps = 68/380 (17%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL + +M G P + ++ + G + KL EM+ + P+ +TY MIE
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G C G A+ LK+M G P+ + GLC +G K G+C
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK-GNCE 609
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVL--------------------------DRMRAFGC 301
N + YT L+ FC + EAL+V DR FG
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 302 L---------ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIR 351
L + V ++ID+ G +EA+ + D ++ G V Y++++ L +
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 352 IKRLEEAEKLFRELLAGELKPDTLASSLLL-----------KELCMKDRVLDGFYLLDAM 400
+ EAE L ++ P+ + L K + + + +L G A
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTAT 789
Query: 401 ENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRP---PYQDSAIDILR 457
NM G C++ + EA++L M+ V P Y ++ R
Sbjct: 790 YNM-------------LIRGFCRQGRIEEASELITRMIGDGV--SPDCITYTTMINELCR 834
Query: 458 KSEEKDLVDLVNQLT--GIR 475
+++ K ++L N +T GIR
Sbjct: 835 RNDVKKAIELWNSMTEKGIR 854
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 123 EGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
EGCV + V+ LCK A + A + KM+ S P+ V Y + + K G+V+
Sbjct: 711 EGCVPNEVTYTAVINGLCK-AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVD 768
Query: 182 MGEKL-LREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
M + + L L + TY +I G C GR E+A L+ M G SP+ + + +
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
+ LCR + G RP+ V Y +LI C + +A + + M G
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKG-IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 301 CLANHVTAFT 310
+ N+ T+ T
Sbjct: 888 LIPNNKTSRT 897
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 182/433 (42%), Gaps = 21/433 (4%)
Query: 46 VENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGV---RFFIWAGFQSGYRHSAYMYRKASS 102
+E++L P++ S V QV+ RC LG RFF+WA + HS Y
Sbjct: 55 LEHTLVAYSPRVSSNLVEQVLKRCK----NLGFPAHRFFLWARRIPDFAHSLESYHILVE 110
Query: 103 LLGIDRNPQMICD-LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSR 161
+LG + ++ D LIE+ E ++ +F V + A L A +M +FG +
Sbjct: 111 ILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIK 170
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P + ++ C K V ++ + P TY ++ G A +
Sbjct: 171 PCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKV 230
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+M C +L+ +A+ D LC+SG G +P+ ++ I ++C
Sbjct: 231 FDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG-LKPDAYSFAIFIHAYC 289
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD- 340
+ + A VLDRM+ + + N T +I +LC V++AY L+D++++ G +
Sbjct: 290 DAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTW 349
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
Y+S++ + A KL + + PD +++LK L R + + M
Sbjct: 350 TYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGM 409
Query: 401 ENMGCXXXXXXXXXXXXXXGLC-QKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKS 459
GL +K L EA + ++M+ + + PPY + +++LR
Sbjct: 410 SER--KFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI---PPYS-TTVEMLRNR 463
Query: 460 ----EEKDLVDLV 468
+ D+VD++
Sbjct: 464 LVGWGQMDVVDVL 476
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 8/250 (3%)
Query: 124 GCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
CVV + + +L LCK + D + ++M + G +PD + + I C GDV
Sbjct: 238 NCVVDLLAYNALLDALCKSGDV-DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHS 296
Query: 183 GEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD 242
K+L M D P++ T+ +I+ LC + +DAY LL +M G +P+ ++I
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
Query: 243 GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
C ++ C P+ TY +++ +++ A + + M
Sbjct: 357 YHCDHCEVNRATKLLSRMDRT-KCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 303 ANHVTAFTLIDSLC-DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKL 361
T +I L KG +EEA R + +++ G+ YS+ + ++R + + +
Sbjct: 416 PTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIP---PYST-TVEMLRNRLVGWGQMD 471
Query: 362 FRELLAGELK 371
++LAG+++
Sbjct: 472 VVDVLAGKME 481
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 176/443 (39%), Gaps = 71/443 (16%)
Query: 63 IQVVSRCCPKQC-QLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYE 121
+ VV R + C L + FF + ++H+ + L +D + L++ +
Sbjct: 44 LDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK 103
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPD------------------ 163
+G + ++F V+ + ++ LA+ A+ + ++++FG P
Sbjct: 104 LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 163
Query: 164 -----------------TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
YNV+++ CK V+ +KLL EMS CPD ++Y T+I
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
Query: 207 EGLCNAGRPED------------------------------AYSLLKDMRVHGCSPNLVV 236
+C G ++ A+ L+++M G SPN++
Sbjct: 224 SSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 237 LSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM 296
S + + LC SG K G C PN+ T +SL++ R +AL++ ++M
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRG-CHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 297 -RAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKR 354
R FG N V TL+ C G + +A + + E G S Y SL+ +
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 355 LEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXX 414
L+ A ++ ++L P+ + + +++ LC + + L++ M C
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC--APSVPTF 460
Query: 415 XXXXXGLCQKNHLAEATKLAKIM 437
GLC L A K+ + M
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQM 483
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 6/292 (2%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+I + + VV N V C + A+ V ME+ G P+ Y +I
Sbjct: 342 MIRGFGLQPNVVAYNTL--VQGFCSHGNIVK-AVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
K+G ++ + +M S CP+++ Y M+E LC + ++A SL++ M C+P++
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+A GLC +G + C PN+VTY L+ + ++ EA +
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 296 MRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVI-SLIRIKR 354
+ G + T TL+ C+ G A +LV K++ G S + +++I + + +
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Query: 355 LEEAEKLFRELLAG--ELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
E A ++ + G + +PD ++ + ++ LC + DG LL+ M + G
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAG 630
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 6/279 (2%)
Query: 124 GCVVTVNMFREVLKLC--KEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
GC + ++K C + + LW + + FG +P+ V YN +++ C G++
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWN-QMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
+ M P++ TY ++I G G + A + M GC PN+VV + +
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM-RAFG 300
+ LCR K +C P+V T+ + I+ C+ + + A V +M +
Sbjct: 430 EALCRHSKFKEAESLIEIMSKE-NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAE 359
C N VT L+D L +EEAY L ++ GV + Y++L+ A
Sbjct: 489 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL 548
Query: 360 KLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLD 398
+L +++ PD + ++++ C + + +LD
Sbjct: 549 QLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 121 EAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
E GC + + ++ + D A+++ KM G P+ V+Y ++ C+
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDM-RVHGCSPNLVVLSA 239
+ E L+ MS + P + T+ I+GLC+AGR + A + + M + H C PN+V +
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNE 498
Query: 240 IFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAF 299
+ DGL ++ G + TY +L+ C AL ++ +M
Sbjct: 499 LLDGLAKANRIEEAYGLTREIFMRG-VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 300 GCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD----CYSSLVISLIRIKRL 355
G + +T +I + C +G E A +++D LV G Y++++ L R
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCR 616
Query: 356 EEAEKLFRELLAGELKPDTLASSLLLKELCMKD--RVLDGFYL 396
E+ L +++ + P S+L+ + D R D F +
Sbjct: 617 EDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAHDQFTI 659
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 130/322 (40%), Gaps = 39/322 (12%)
Query: 7 FRFSPCLHKLKTLPFSSQKMGMASLADTLYSHLHQCN--------GSVENSLSKIKPKLD 58
F P + TL G A +++SH+ + GS+ N +K + LD
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK-RGSLD 404
Query: 59 SQCVI---QVVSRCCPKQCQLGVRFFIWAGFQSGY-RHSAYMYRKASSLLGIDRNPQMIC 114
I + S CCP ++ RHS + ++A SL
Sbjct: 405 GAVYIWNKMLTSGCCPN-------VVVYTNMVEALCRHSKF--KEAESL----------- 444
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKME-DFGSRPDTVMYNVVIR 172
IE E C +V F +K LC +L D A V R+ME P+ V YN ++
Sbjct: 445 --IEIMSKENCAPSVPTFNAFIKGLCDAGRL-DWAEKVFRQMEQQHRCPPNIVTYNELLD 501
Query: 173 LCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSP 232
K +E L RE+ + TY T++ G CNAG P A L+ M V G SP
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Query: 233 NLVVLSAIFDGLCRSGSXXXXXXXXXXXX-KSGDCRPNVVTYTSLIQSFCERSQWNEALN 291
+ + ++ I C+ G RP+V++YT++I C + + +
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI 621
Query: 292 VLDRMRAFGCLANHVTAFTLID 313
+L+RM + G + + T LI+
Sbjct: 622 LLERMISAGIVPSIATWSVLIN 643
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 150/339 (44%), Gaps = 6/339 (1%)
Query: 45 SVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLL 104
+ E +L + ++D+ QV+ + LG FF W Q G++H + Y L
Sbjct: 317 AAEEALQNLGLRIDAYQANQVLKQMNDYGNALG--FFYWLKRQPGFKHDGHTYTTMVGNL 374
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
G + I L++ +GC + ++ A + A+ V +M++ G +PD
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
V Y +I + K G +++ + + M PD TY +I L AG A+ L +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M GC+PNLV + + D ++ + +G P+ VTY+ +++
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG-FEPDKVTYSIVMEVLGHCG 553
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV--SYGDCY 342
EA V M+ + + L+D G VE+A++ ++ G+ + C
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC- 612
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+SL+ + +R+ ++ EA +L + +LA L+P +LLL
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D TY TM+ L A + LL +M GC PN V + + R+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G C+P+ VTY +LI + + A+++ RM+A G + T +I+ L
Sbjct: 423 NQMQEAG-CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVISL-IRIKRLEEAEKLFRELLAGELKPDTLA 376
G + A++L ++V+ G + ++++ L + + + A KL+R++ +PD +
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 377 SSLLLKEL 384
S++++ L
Sbjct: 542 YSIVMEVL 549
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 150/339 (44%), Gaps = 6/339 (1%)
Query: 45 SVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLL 104
+ E +L + ++D+ QV+ + LG FF W Q G++H + Y L
Sbjct: 317 AAEEALQNLGLRIDAYQANQVLKQMNDYGNALG--FFYWLKRQPGFKHDGHTYTTMVGNL 374
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
G + I L++ +GC + ++ A + A+ V +M++ G +PD
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
V Y +I + K G +++ + + M PD TY +I L AG A+ L +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M GC+PNLV + + D ++ + +G P+ VTY+ +++
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG-FEPDKVTYSIVMEVLGHCG 553
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV--SYGDCY 342
EA V M+ + + L+D G VE+A++ ++ G+ + C
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC- 612
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+SL+ + +R+ ++ EA +L + +LA L+P +LLL
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D TY TM+ L A + LL +M GC PN V + + R+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G C+P+ VTY +LI + + A+++ RM+A G + T +I+ L
Sbjct: 423 NQMQEAG-CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVISL-IRIKRLEEAEKLFRELLAGELKPDTLA 376
G + A++L ++V+ G + ++++ L + + + A KL+R++ +PD +
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 377 SSLLLKEL 384
S++++ L
Sbjct: 542 YSIVMEVL 549
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 150/339 (44%), Gaps = 6/339 (1%)
Query: 45 SVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLL 104
+ E +L + ++D+ QV+ + LG FF W Q G++H + Y L
Sbjct: 317 AAEEALQNLGLRIDAYQANQVLKQMNDYGNALG--FFYWLKRQPGFKHDGHTYTTMVGNL 374
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
G + I L++ +GC + ++ A + A+ V +M++ G +PD
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
V Y +I + K G +++ + + M PD TY +I L AG A+ L +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M GC+PNLV + + D ++ + +G P+ VTY+ +++
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG-FEPDKVTYSIVMEVLGHCG 553
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV--SYGDCY 342
EA V M+ + + L+D G VE+A++ ++ G+ + C
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC- 612
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+SL+ + +R+ ++ EA +L + +LA L+P +LLL
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D TY TM+ L A + LL +M GC PN V + + R+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G C+P+ VTY +LI + + A+++ RM+A G + T +I+ L
Sbjct: 423 NQMQEAG-CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVISL-IRIKRLEEAEKLFRELLAGELKPDTLA 376
G + A++L ++V+ G + ++++ L + + + A KL+R++ +PD +
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 377 SSLLLKEL 384
S++++ L
Sbjct: 542 YSIVMEVL 549
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 192/439 (43%), Gaps = 14/439 (3%)
Query: 42 CNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKAS 101
+ VE L++ KL S +I+ V + L + F WA Q G++H+ Y
Sbjct: 77 TDSKVETLLNEASVKL-SPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALI 135
Query: 102 SLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSR 161
LG + ++I L++ +A+ +++ F + + A+ A+ KME+FG +
Sbjct: 136 ESLGKIKQFKLIWSLVDDMKAKK-LLSKETFALISRRYARARKVKEAIGAFHKMEEFGFK 194
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
++ +N ++ K +V +K+ +M PD+ +Y ++EG +
Sbjct: 195 MESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEV 254
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
++M+ G P++V I + C++ + +C+P+ + SLI
Sbjct: 255 NREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQR-NCKPSPHIFCSLINGLG 313
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS-YGD 340
+ N+AL +R ++ G T L+ + C +E+AY+ VD++ GV
Sbjct: 314 SEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNAR 373
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
Y ++ LIR++R +EA ++++ + +P ++++ C K+R+ + D M
Sbjct: 374 TYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEM 430
Query: 401 ENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPP---YQDSAIDILR 457
+ G LC +N L EA + ML V +RPP + +L
Sbjct: 431 KGKGV--LPGMHMFSSLITALCHENKLDEACEYFNEML--DVGIRPPGHMFSRLKQTLLD 486
Query: 458 KSEEKDLVDLVNQLTGIRK 476
+ + + DLV ++ +RK
Sbjct: 487 EGRKDKVTDLVVKMDRLRK 505
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 2/265 (0%)
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
+A A+ + M++ G DT YN+VI CK G V +LL EM P ++
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXX 260
TY ++I+GL R ++AY L ++ + N+V+ S++ DG + G
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 261 XKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGC 320
+ G PN+ T+ SL+ + + + NEAL M+ C N VT LI+ LC
Sbjct: 684 MQKG-LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 321 VEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSL 379
+A+ ++ + G+ Y++++ L + + EA LF A PD+ +
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 380 LLKELCMKDRVLDGFYLLDAMENMG 404
+++ L +R +D F L + G
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 40/331 (12%)
Query: 112 MICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVI 171
M+ L + + G TV++F +++ + D AL +L +M+ D V+YNV I
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245
Query: 172 RLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC--------------------- 210
K G V+M K E+ + PD +TY +MI LC
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 211 --------------NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
+AG+ ++AYSLL+ R G P+++ + I L + G
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
K D PN+ TY LI C + + A + D M+ G N T ++D LC
Sbjct: 366 FEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
++EA + +++ ++ V D + SL+ L ++ R+++A K++ ++L + + ++
Sbjct: 424 KSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 375 LASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
+ + L+K R DG + M N C
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 13/284 (4%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
V TVN+ V +LCK +L D A + +M+ PD + + +I K G V+ K
Sbjct: 412 VRTVNIM--VDRLCKSQKL-DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
+ +M SD + I Y ++I+ N GR ED + + KDM CSP+L +L+ D +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
++G K+ P+ +Y+ LI + NE + M+ GC+ +
Sbjct: 529 KAGE-PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-----VSYGDCYSSLVISLIRIKRLEEAEK 360
+ID C G V +AY+L++++ G V+YG S++ L +I RL+EA
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG----SVIDGLAKIDRLDEAYM 643
Query: 361 LFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
LF E + ++ + + S L+ R+ + + +L+ + G
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 154/361 (42%), Gaps = 5/361 (1%)
Query: 45 SVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLL 104
S EN+LS + K + VI V+ R K + +F W ++ H Y ++
Sbjct: 51 SAENTLSALSFKPQPEFVIGVLRRL--KDVNRAIEYFRWYERRTELPHCPESYNSLLLVM 108
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
RN + ++ G +VN E++ C +A V++ M F RP
Sbjct: 109 ARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAF 168
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
Y +I +M L ++M P + + T+I G GR + A SLL +
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M+ ++V+ + D + G +G +P+ VTYTS+I C+ +
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG-LKPDEVTYTSMIGVLCKAN 287
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYS 343
+ +EA+ + + + + T+I G +EAY L+++ G + Y+
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENM 403
++ L ++ +++EA K+F E + + P+ ++L+ LC ++ F L D+M+
Sbjct: 348 CILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA 406
Query: 404 G 404
G
Sbjct: 407 G 407
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 4/252 (1%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
+L S + +GCV+ + V+ CK ++ + A +L +M+ G P V Y VI
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV-NKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
K ++ L E +++ Y ++I+G GR ++AY +L+++ G +PN
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
L +++ D L ++ K C PN VTY LI C+ ++N+A
Sbjct: 692 LYTWNSLLDALVKA-EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL-VEHGVSYGDCYSSLVISLIRI 352
M+ G + ++ T+I L G + EA L D+ GV CY++++ L
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 353 KRLEEAEKLFRE 364
R +A LF E
Sbjct: 811 NRAMDAFSLFEE 822
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 8/296 (2%)
Query: 114 CDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
C + E + + C F ++ + D A V KM D R ++++Y +I+
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
G E G K+ ++M + PDL T ++ + AG PE ++ ++++ P+
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
S + GL ++G + G C + Y +I FC+ + N+A +L
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQG-CVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD----KLVEHGVSYGDCYSSLVISL 349
+ M+ G VT ++ID L ++EAY L + K +E V YSSL+
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV---IYSSLIDGF 667
Query: 350 IRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
++ R++EA + EL+ L P+ + LL L + + + +M+ + C
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 95/221 (42%), Gaps = 1/221 (0%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L+E + +G TV + V+ + D A + + + + V+Y+ +I
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
K G ++ +L E+ P+L T+ ++++ L A +A + M+ C+PN V
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+ +GLC+ K G +P+ ++YT++I + EA + DR
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQG-MKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 296 MRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
+A G + + +I+ L + +A+ L ++ G+
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A +L ++ G P+ +N ++ K ++ + M P+ +TY +
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I GLC + A+ ++M+ G P+ + + + GL ++G+ +G
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
P+ Y ++I+ ++ +A ++ + R G ++ T L+D+L C+E+A
Sbjct: 794 V-PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 10/264 (3%)
Query: 123 EGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
+ C V +N L K+ +L D + +KM G + +YNV++ C K GD E
Sbjct: 169 QACTVLLN------SLVKQ-RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEK 221
Query: 183 GEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD 242
EKLL EM PD+ TY T+I C +A S+ M G +PN+V ++
Sbjct: 222 AEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIH 281
Query: 243 GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
G R G D N VTYT+LI +C + +EAL + + M + G
Sbjct: 282 GFSREGRMREATRLFREI--KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFS 339
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY-SSLVISLIRIKRLEEAEKL 361
VT +++ LC+ G + EA RL+ ++ + + ++L+ + +I+ + A K+
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 362 FRELLAGELKPDTLASSLLLKELC 385
++++ LK D + L+ C
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFC 423
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 1/204 (0%)
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
P L ++ L + + + K M G N+ V + + +SG
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
+ G P++ TY +LI +C++S EAL+V DRM G N VT + I
Sbjct: 226 LSEMEEKG-VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
+G + EA RL ++ + + Y++L+ R+ ++EA +L + + P +
Sbjct: 285 REGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 377 SSLLLKELCMKDRVLDGFYLLDAM 400
+ +L++LC R+ + LL M
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEM 368
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 4/219 (1%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D AL + ME G P V YN ++R C+ G + +LL EMS PD IT T+
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I C A + K M G ++ A+ G C+ + G
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG- 442
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
P TY+ L+ F +++ +E +L+ G A+ LI +C V+ A
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAK 502
Query: 326 RLVDKLVEHGVSYGDC--YSSLVISLIRIKRLEEAEKLF 362
L + + + G+ GD ++++ + R ++ EA LF
Sbjct: 503 VLFESMEKKGL-VGDSVIFTTMAYAYWRTGKVTEASALF 540
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 3/215 (1%)
Query: 116 LIESYEAEGCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
L E E+ G V + +L KLC++ ++ + A +L +M PD + N +I
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIRE-ANRLLTEMSGKKIEPDNITCNTLINAY 387
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
CK D+ K+ ++M S D+ +Y +I G C E+A L M G SP
Sbjct: 388 CKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGY 447
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
S + DG K G C +V Y LI+ C+ Q + A + +
Sbjct: 448 ATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC-ADVALYRGLIRRICKLEQVDYAKVLFE 506
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD 329
M G + + V T+ + G V EA L D
Sbjct: 507 SMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFD 541
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 4/284 (1%)
Query: 124 GCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
G + V F ++ C E +L D + R + +F PD V YN +++ KKG +
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258
Query: 183 GEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD 242
++LL +M + P+ +TY ++ G C G ++A+ +++ M+ P+L + + +
Sbjct: 259 LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILIN 318
Query: 243 GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
GLC +GS KS +P+VVTY +LI E EA ++++M G
Sbjct: 319 GLCNAGS-MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE-HGVSYGD-CYSSLVISLIRIKRLEEAEK 360
AN VT + LC + E R V +LV+ HG S Y +L+ + +++ L A +
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 361 LFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ RE+ +K +T+ + +L LC + ++ + LL++ G
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 6/292 (2%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
L+E E +G LK LCKE + V V ++ G PD V Y+ +I+
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
K GD+ +++REM + IT T+++ LC + ++A++LL G +
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
V + G R K P V T+ SLI C + A+ D
Sbjct: 487 VTYGTLIMGFFRE-EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYS--SLVISLIRI 352
+ G L + T ++I C +G VE+A+ ++ ++H D Y+ L+ L +
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK-PDNYTCNILLNGLCKE 604
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
E+A F L+ E + DT+ + ++ C ++ + + LL ME G
Sbjct: 605 GMTEKALNFFNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 13/276 (4%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+L+ S G +V + ++ + + AL + +M+ P +N +I
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
C G E+ + E++ S PD T+ ++I G C GR E A+ + H P+
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+ + +GLC+ G + + + VTY ++I +FC+ + EA ++L
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKR 354
M G + T + I L + G + E L+ K +G L + +
Sbjct: 650 EMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF---SGKFGSMKRDLQVETEKNPA 706
Query: 355 LEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
E+++ EL + +A S ++ ELC + R+
Sbjct: 707 TSESKE--------ELNTEAIAYSDVIDELCSRGRL 734
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 213 GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR---SGSXXXXXXXXXXXXKSGDCRPN 269
G+P A + + M PNL+ + + GL R S S K G N
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIG-VSLN 203
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRA-FGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
V T+ L+ +C + +AL +L+RM + F ++VT T++ ++ KG + + L+
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 329 DKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
+ ++G V Y++LV ++ L+EA ++ + + PD ++L+ LC
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 388 DRVLDGFYLLDAMENM 403
+ +G L+DAM+++
Sbjct: 324 GSMREGLELMDAMKSL 339
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 112/265 (42%), Gaps = 5/265 (1%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
V T N+ VL C E + ++++KME G P V YN V+ CKKG + +
Sbjct: 233 VATFNILINVL--CAEGSFEKSS-YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 289
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
LL M D+ TY +I LC + R Y LL+DMR PN V + + +G
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
G G PN VT+ +LI + EAL + M A G +
Sbjct: 350 NEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRE 364
V+ L+D LC + A ++ +GV G Y+ ++ L + L+EA L E
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 365 LLAGELKPDTLASSLLLKELCMKDR 389
+ + PD + S L+ C R
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGR 493
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 129/334 (38%), Gaps = 58/334 (17%)
Query: 104 LGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPD 163
G+ N LI+ + +EG F+E LK+ ME G P
Sbjct: 367 FGLSPNHVTFNALIDGHISEGN------FKEALKM-------------FYMMEAKGLTPS 407
Query: 164 TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLK 223
V Y V++ CK + ++ M + C ITY MI+GLC G ++A LL
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 224 DMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER 283
+M G P++V SA+ +G C+ G + G PN + Y++LI + C
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG-LSPNGIIYSTLIYNCCRM 526
Query: 284 SQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV-----DKLVEHGVSY 338
EA+ + + M G +H T L+ SLC G V EA + D ++ + VS+
Sbjct: 527 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586
Query: 339 GDC--------------------------------YSSLVISLIRIKRLEEAEKLFRELL 366
DC Y SL+ L + L EAEK + L
Sbjct: 587 -DCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
A DT+ + LL +C + L M
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 1/254 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A V +M G P Y +++ CK G + EK L+ + A D + Y T++
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
+C +G A SL +M P+ +++ GLCR G G+
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PN V YT + + QW + ++M G + VT +ID G +E+ L
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 328 VDKL-VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+ ++ ++G Y+ L+ + K + + L+R ++ + PD L L+ +C
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 387 KDRVLDGFYLLDAM 400
+ + G +L A
Sbjct: 842 SNMLEIGLKILKAF 855
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 131/307 (42%), Gaps = 11/307 (3%)
Query: 140 KEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDL 199
+E + D +L + R M +G P N ++ K G+ L+EM CPD+
Sbjct: 175 REGMIQD-SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 233
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
T+ +I LC G E + L++ M G +P +V + + C+ G
Sbjct: 234 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR-FKAAIELLD 292
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
KS +V TY LI C ++ + +L MR N VT TLI+ ++G
Sbjct: 293 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 352
Query: 320 CVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
V A +L+++++ G+S +++L+ I +EA K+F + A L P ++
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412
Query: 379 LLLKELCMKDRVLD---GFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAK 435
+LL LC K+ D GFY+ M+ G GLC+ L EA L
Sbjct: 413 VLLDGLC-KNAEFDLARGFYM--RMKRNGV--CVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 436 IMLKKSV 442
M K +
Sbjct: 468 EMSKDGI 474
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 107/270 (39%), Gaps = 39/270 (14%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKL-------- 186
VL +C E+ + ++ L +L+ G D +N++I CC G++ L
Sbjct: 836 VLGIC-ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 894
Query: 187 ---------------------------LREMSLSDACPDLITYITMIEGLCNAGRPEDAY 219
L EMS P+ YI +I GLC G + A+
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 220 SLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQS 279
+ ++M H P V SA+ L + G K P + ++T+L+
Sbjct: 955 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM-KLVPTIASFTTLMHL 1013
Query: 280 FCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSY 338
C+ EAL + M G + V+ LI LC KG + A+ L +++ G ++
Sbjct: 1014 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1073
Query: 339 GDCYSSLVISLI-RIKRLEEAEKLFRELLA 367
Y +L+ L+ R A+ + ++LLA
Sbjct: 1074 ATTYKALIRGLLARETAFSGADIILKDLLA 1103
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 149/363 (41%), Gaps = 36/363 (9%)
Query: 76 LGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREV 135
L RFF W+ Q Y HS Y R +++ DLI + + ++ V F V
Sbjct: 116 LTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK-MLNVETFCIV 174
Query: 136 LKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGE----------- 184
++ AQ D A++ ME + P+ V +N ++ CK +V +
Sbjct: 175 MRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT 234
Query: 185 -----------------------KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
++ REM + PD++TY M++ LC AGR ++A +
Sbjct: 235 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 294
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
++ M C P + S + +SG + +V + SLI +FC
Sbjct: 295 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG-MKADVAVFNSLIGAFC 353
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC 341
+ ++ VL M++ G N + ++ L ++G +EA+ + K+++ D
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADT 413
Query: 342 YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
Y+ ++ K +E A+K+++ + + P S+L+ LC + LL+ M
Sbjct: 414 YTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 473
Query: 402 NMG 404
MG
Sbjct: 474 EMG 476
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 8/216 (3%)
Query: 124 GC---VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
GC +VT ++ ++L CK ++ D AL ++R M+ +P T +Y+V++ + +
Sbjct: 267 GCHPDIVTYSIMVDIL--CKAGRV-DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRL 323
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
E EM S D+ + ++I C A R ++ Y +LK+M+ G +PN + I
Sbjct: 324 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
L G K C P+ TYT +I+ FCE+ + A V MR G
Sbjct: 384 LRHLIERGEKDEAFDVFRKMIKV--CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 441
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
+ T LI+ LC++ ++A L+++++E G+
Sbjct: 442 VFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 93 SAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVL-KLCKEAQLADVALWV 151
+ ++Y G + + D E G V +F ++ CK ++ +V V
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYR-V 364
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
L++M+ G P++ N+++R ++G+ + + R+M + PD TY +I+ C
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCE 423
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVV 271
E A + K MR G P++ S + +GLC + + G RP+ V
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMG-IRPSGV 482
Query: 272 TYTSLIQSFCERSQ------WNEALNVL 293
T+ L Q + + NE +NVL
Sbjct: 483 TFGRLRQLLIKEEREDVLKFLNEKMNVL 510
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 155/351 (44%), Gaps = 26/351 (7%)
Query: 135 VLKLCKEAQLADVALWVLRKM-EDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLS 193
+L C+ L D AL V M ++ P++V Y+++I C+ G +E L +M
Sbjct: 237 LLGFCRGLNLRD-ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 194 DACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXX 253
P TY +I+ LC+ G + A++L +M GC PN+ + + DGLCR G
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 254 XXXXXXXXKSGDCR--------PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
+G CR P+V+TY +LI +C+ + A +L M C N
Sbjct: 356 ---------NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRE 364
T L++ LC G +A L+ +++++G+S Y+ L+ L R + A KL
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 365 LLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQK 424
+ +++PD L + ++ C + + L M G G+C+
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG--ISLDEVTGTTLIDGVCKV 524
Query: 425 NHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKS----EEKDLVDLVNQL 471
+A + + ++K +L P + +D+L K EE ++ +N+L
Sbjct: 525 GKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL 575
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 146/356 (41%), Gaps = 39/356 (10%)
Query: 123 EGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
+GC + + ++K + L D A + +M G +P+ Y V+I C+ G +E
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 183 GEKLLREMSLSDACPDLITYITMI-----------------------------------E 207
+ R+M P +ITY +I E
Sbjct: 355 ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
GLC G+P A LLK M +G SP++V + + DGLCR G D
Sbjct: 415 GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH-MNTAYKLLSSMNCFDIE 473
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P+ +T+T++I +FC++ + + A L M G + VT TLID +C G +A +
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 328 VDKLVEHGVSYGDCYSSLVISLIRIK-RLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
++ LV+ + ++++ ++ +++E + ++ L P + + L+ L
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 387 KDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
+ F +L+ M+ GC GLCQ + EA KL M V
Sbjct: 594 SGDITGSFRILELMKLSGC--LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 169/419 (40%), Gaps = 32/419 (7%)
Query: 43 NGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRH---------- 92
N S+++ +S + P + SQ + + R C VRFF+W S Y
Sbjct: 57 NSSLKSLVSHMNPNVASQVI--SLQRSDNDIC---VRFFMWVCKHSSYCFDPTQKNQLLK 111
Query: 93 ---SAYMYRKASSLLGI-----DRNPQMICDLI----ESYEAEGCVVTVNMFREVLKLCK 140
S+ +YR A +++ R + + L+ E E G + + +L
Sbjct: 112 LIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLA 171
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
+ L +A R+ME G + Y ++ CK G E E + ++ D
Sbjct: 172 KLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSH 231
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVH-GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
+++ G C DA + M C+PN V S + GLC G
Sbjct: 232 IGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQ 291
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
+ G C+P+ TYT LI++ C+R ++A N+ D M GC N T LID LC G
Sbjct: 292 MGEKG-CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Query: 320 CVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
+EEA + K+V+ + Y++L+ + R+ A +L + KP+ +
Sbjct: 351 KIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFN 410
Query: 379 LLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIM 437
L++ LC + +LL M + G GLC++ H+ A KL M
Sbjct: 411 ELMEGLCRVGKPYKAVHLLKRMLDNG--LSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEG 208
L +L K+ G P V Y ++ + GD+ ++L M LS P++ Y +I G
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 209 LCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRP 268
LC GR E+A LL M+ G SPN V + + G +G + G
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG-YEL 684
Query: 269 NVVTYTSLIQSFC---------ERSQ-------------WNEALNVLDRMRAFGCLANHV 306
N Y+SL+Q F E S NE ++V++++ GC++
Sbjct: 685 NDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLG--GCISG-- 740
Query: 307 TAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
L+ LC +G +E+ LV ++E GV
Sbjct: 741 LCIFLVTRLCKEGRTDESNDLVQNVLERGV 770
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 156/368 (42%), Gaps = 10/368 (2%)
Query: 46 VENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLG 105
+E +L + L + V +++ R ++ + RFF WAG Q Y H Y + +L
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEE-KTAFRFFTWAGHQEHYSHEPIAYNEMIDILS 170
Query: 106 I----DRNPQMICDLIESYEAEG-CVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGS 160
++ +++ D+++ + VV V++ E+L+ E L V + RK +
Sbjct: 171 STKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKT 230
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
+P+ +N+++ CK G V+ GE LLR M PD T+ + G C P+ A
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC--RPNVVTYTSLIQ 278
LL++M G P A D C++G G P T+ +I
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
+ + + E ++ RM + GCL + T +I+ +C V+EAY+ +D++ G
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 339 GD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
Y+ + L ++ +EA KL+ ++ P ++L+ D F
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 398 DAMENMGC 405
M+ C
Sbjct: 470 TEMDKRDC 477
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 2/203 (0%)
Query: 160 SRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAY 219
S P + ++I K E +L+ M + PD+ TY +IEG+C A + ++AY
Sbjct: 337 SAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAY 396
Query: 220 SLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQS 279
L +M G P++V + LC + +S C P+V TY LI
Sbjct: 397 KFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESR-CAPSVQTYNMLISM 455
Query: 280 FCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG 339
F E + A N M C+ + T +I+ L D +EA L++++V G+
Sbjct: 456 FFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP 515
Query: 340 -DCYSSLVISLIRIKRLEEAEKL 361
+ S ++ L + L+ K+
Sbjct: 516 YRVFDSFLMRLSEVGNLKAIHKV 538
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+LI + GC+ V+ +++V++ A+ D A L +M + G PD V YN +R+
Sbjct: 362 ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVL 421
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
C+ + KL M S P + TY +I P+ A++ +M C ++
Sbjct: 422 CENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDV 481
Query: 235 VVLSAIFDGL 244
A+ +GL
Sbjct: 482 ETYCAMINGL 491
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 2/238 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A++V +ME G + D V+ ++I CK V ++L+ M P+++TY ++I
Sbjct: 32 AVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLIT 91
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
GLC +GR DA L +M +PN++ SA+ D + G +
Sbjct: 92 GLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS-ID 150
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PNV TY+SLI C ++ +EA+ +LD M + GC N VT TL + V++ +L
Sbjct: 151 PNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKL 210
Query: 328 VDKLVEHGVSYGDCY-SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
+D + + GV+ ++L+ + +++ A +F + + L P+ + +++L L
Sbjct: 211 LDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 154 KMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAG 213
KM G PD V + ++ C ++ + +M D++ +I+ LC
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
A +LK M+ G SPN+V S++ GLC+SG S PNV+T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGR-LADAERRLHEMDSKKINPNVITF 121
Query: 274 TSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
++LI ++ +R + ++ +V M N T +LI LC V+EA +++D ++
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 334 HGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
G + YS+L + R+++ KL ++ + +T++ + L+K
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 2/210 (0%)
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
PD++T +++ G C + +DA + M G ++VV + + D LC++
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN-RLVVPALE 69
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
K PNVVTY+SLI C+ + +A L M + N +T LID+
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
+G + + + +++ + YSSL+ L R++EA K+ +++ P+ +
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
S L RV DG LLD M G
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
+LK M++ G P++V S++ +G C S S K G R +VV T LI +
Sbjct: 1 MLKMMKL-GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKR-DVVVDTILIDTL 58
Query: 281 CERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG- 339
C+ AL VL RM+ G N VT +LI LC G + +A R + ++ ++
Sbjct: 59 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 340 DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDA 399
+S+L+ + + +L + + +++ ++ + P+ S L+ LCM +RV + +LD
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 400 MENMGC 405
M + GC
Sbjct: 179 MISKGC 184
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 114/297 (38%), Gaps = 73/297 (24%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM------- 190
LCK +L AL VL++M+D G P+ V Y+ +I CK G + E+ L EM
Sbjct: 58 LCKN-RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINP 116
Query: 191 ------SLSDAC----------------------PDLITYITMIEGLCNAGRPEDAYSLL 222
+L DA P++ TY ++I GLC R ++A +L
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
M GC+PN+V S + +G +S + G N V+ +LI+ + +
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG-VAANTVSCNTLIKGYFQ 235
Query: 283 RSQWNEALNVLDRMRAFGCLAN-------------------------H----------VT 307
+ + AL V M + G + N H +T
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIIT 295
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFR 363
+I +C V+EAY L KL V Y+ ++ L R EA+ L R
Sbjct: 296 YTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 153/361 (42%), Gaps = 91/361 (25%)
Query: 77 GVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYE--AEGCVV------- 127
G+RFF W G+ H + LG RN + + + S E + GCV
Sbjct: 84 GLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 128 -------TVNMFREVLKLCKEAQLADVALWVL-----------------------RKMED 157
+F+E +KL + + ++ VL
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 158 FGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPED 217
+G PD+ +N +I CK V+ ++ ++M L PD++TY T+I+GLC AG+ +
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 218 AYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
A+++L M K+ D PNVV+YT+L+
Sbjct: 263 AHNVLSGM----------------------------------LKKATDVHPNVVSYTTLV 288
Query: 278 QSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
+ +C + + +EA+ V M + G N VT TLI L EA+R D++ + +
Sbjct: 289 RGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS------EAHR-YDEIKDILIG 341
Query: 338 YGDCYSSLVISL----IRIK------RLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
D +++ I IK L+ A K+F+E+L +L PD+ + S+L++ LCM+
Sbjct: 342 GNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMR 401
Query: 388 D 388
+
Sbjct: 402 N 402
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 185/435 (42%), Gaps = 81/435 (18%)
Query: 46 VENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRH--SAYM------- 96
E +L +K K+D + V ++ + + ++FF WAG + ++H S YM
Sbjct: 80 AEKALEVLKLKVDHRLVRSILE--IDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLE 137
Query: 97 --------YRKASSLLG---IDRNPQMICDLIES--------------YEAEG--CVVTV 129
YR ++ + +P ++ +L+++ Y+A+G C T
Sbjct: 138 EARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTS 197
Query: 130 NMFREVL-----------------KLCKEAQ-------------------LADVALWVLR 153
+ + V+ ++C E D A+ +
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 154 KMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAG 213
+M+D +P +Y ++ + K G VE L EM + P + TY +I+GL AG
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
R ++AY KDM G +P++V L+ + + L + G C P VV+Y
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG-MWRCTPTVVSY 376
Query: 274 TSLIQSFCE-RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV 332
++I++ E ++ +E + D+M+A + T LID C VE+A L++++
Sbjct: 377 NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMD 436
Query: 333 EHGVSYGDC---YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
E G + C Y SL+ +L + KR E A +LF+EL + ++++K +
Sbjct: 437 EKG--FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 390 VLDGFYLLDAMENMG 404
+ + L + M+N G
Sbjct: 495 LSEAVDLFNEMKNQG 509
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 7/271 (2%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
DL E + GC TV + E++K +A D A + M G PD V N ++ +
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL 348
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA-GRPEDAYSLLKDMRVHGCSPN 233
K G VE + EM + P +++Y T+I+ L + + S M+ SP+
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
S + DG C++ + G P Y SLI + + ++ A +
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKG-FPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 294 DRMRA-FGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD--CYSSLVISLI 350
++ FG +++ V A +I G + EA L +++ G S D Y++L+ ++
Sbjct: 468 KELKENFGNVSSRVYA-VMIKHFGKCGKLSEAVDLFNEMKNQG-SGPDVYAYNALMSGMV 525
Query: 351 RIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+ + EA L R++ + D + +++L
Sbjct: 526 KAGMINEANSLLRKMEENGCRADINSHNIIL 556
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 156 EDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRP 215
E+FG+ V Y V+I+ K G + L EM + PD+ Y ++ G+ AG
Sbjct: 472 ENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 216 EDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTS 275
+A SLL+ M +GC ++ + I +G R+G SG +P+ VTY +
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG-IKPDGVTYNT 589
Query: 276 LIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
L+ F + EA ++ M+ G + +T +++D++ +
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGN 631
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL +L +M++ G P Y +I K E +L +E+ + Y MI+
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G+ +A L +M+ G P++ +A+ G+ ++G ++G CR
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG-CR 546
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
++ ++ ++ F A+ + + ++ G + VT TL+ G EEA R+
Sbjct: 547 ADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARM 606
Query: 328 VDKLVEHGVSY-GDCYSSLV 346
+ ++ + G Y YSS++
Sbjct: 607 MREMKDKGFEYDAITYSSIL 626
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
DL + +G V + ++ +A + + A +LRKME+ G R D +N+++
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGF 559
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
+ G ++ + S PD +TY T++ +AG E+A ++++M+ G +
Sbjct: 560 ARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDA 619
Query: 235 VVLSAIFDGL 244
+ S+I D +
Sbjct: 620 ITYSSILDAV 629
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 149/358 (41%), Gaps = 41/358 (11%)
Query: 83 WAGFQ----SGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKL 138
W +Q SG + Y + L D + + + + +G + + ++
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
L + A ++ M G P YN VI CK G E +++ EM S PD
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
TY +++ C G + + DMR P+LV S++ RSG+
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
++G P+ V YT LIQ +C + + A+N+ + M GC + VT T++ LC +
Sbjct: 400 SVKEAG-LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 319 GCVEEAYRLVDKLVEHGV---SY-------GDC--------------------------Y 342
+ EA +L +++ E + SY G C Y
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
++L+ ++ ++ A++++ ++++ E+ P ++ S+L+ LC K + + F + D M
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 2/312 (0%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
F ++ L + D AL +++ G PD V+Y ++I+ C+KG + + L EM
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
D++TY T++ GLC +A L +M P+ L+ + DG C+ G+
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN-L 496
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
K R +VVTY +L+ F + + A + M + L ++ L
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY-SSLVISLIRIKRLEEAEKLFRELLAGEL 370
+++LC KG + EA+R+ D+++ + +S++ R + E ++++
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 371 KPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEA 430
PD ++ + L+ ++ + F L+ ME G C++N + EA
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 431 TKLAKIMLKKSV 442
+ + M+++ V
Sbjct: 677 EVVLRKMIERGV 688
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 160/401 (39%), Gaps = 74/401 (18%)
Query: 116 LIESYEA------EGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
L E++EA +G V+++ ++ ++A V +++ G + N+
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG 229
++ CK G +E L ++ PD++TY T+I + G E+A+ L+ M G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 230 CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG------------------------- 264
SP + + + +GLC+ G +SG
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 265 ---------DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
D P++V ++S++ F ++AL + ++ G + ++V LI
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 316 CDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
C KG + A L +++++ G + Y++++ L + K L EA+KLF E+ L PD+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 375 LASSLLLKELC--------------MKDR-----------VLDGFYLLDAMEN------- 402
++L+ C MK++ +LDGF + ++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 403 -MGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
+ LC K HLAEA ++ M+ K++
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 131/286 (45%), Gaps = 6/286 (2%)
Query: 123 EGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
+GC + V + +L LCK L + A + +M + PD+ ++I CK G+++
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGE-ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
+L ++M D++TY T+++G G + A + DM P + S +
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
+ LC G S + +P V+ S+I+ +C ++ + L++M + G
Sbjct: 558 NALCSKGHLAEAFRVWDEMI-SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 302 LANHVTAFTLIDSLCDKGCVEEAYRLVDKL-VEHGVSYGD--CYSSLVISLIRIKRLEEA 358
+ + ++ TLI + + +A+ LV K+ E G D Y+S++ R +++EA
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 359 EKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
E + R+++ + PD + ++ +D + + F + D M G
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
CK L + A+ + +KM++ R D V YN ++ K GD++ +++ +M + P
Sbjct: 491 CKLGNLQN-AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
I+Y ++ LC+ G +A+ + +M P +++ +++ G CRSG+
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 259 XXXKSG---DC---------------------------------RPNVVTYTSLIQSFCE 282
G DC P+V TY S++ FC
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY 342
++Q EA VL +M G + T +I+ + + EA+R+ D++++ G S D +
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CK ++ D A + + ME G PD + Y+ +I K G + MG KL +
Sbjct: 296 FCKRGEM-DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL 354
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D++ + + I+ +G A + K M G SPN+V + + GLC+ G
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
K G P++VTY+SLI FC+ + + M G + V L+D L
Sbjct: 415 GQILKRG-MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
+G + A R K++ + ++SL+ R+ R +EA K+FR + +KPD
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ +++ M+ R+ + +L M MG
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 2/244 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G + D V+++ I + K GD+ + + M P+++TY +I+GLC GR +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
+ + + G P++V S++ DG C+ G+ K G P+VV Y L+
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG-YPPDVVIYGVLVD 469
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
++ A+ +M N V +LID C +EA ++ + +G+
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 339 GDCYSSLVISL-IRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
+ V+ + I RLEEA LF + L+PD LA L+ C + G L
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 398 DAME 401
D M+
Sbjct: 590 DLMQ 593
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 171/424 (40%), Gaps = 27/424 (6%)
Query: 27 GMASLADTLYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLG-----VRFF 81
GM +AD ++ + G N L I+ + V + + CC C+ G + F
Sbjct: 113 GMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECC---CRYGMVDKALEIF 169
Query: 82 IWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCV-------VTVNMFRE 134
+++ +YR +SL+G DR DLI + + C V+ + F
Sbjct: 170 VYSTQLGVVIPQDSVYRMLNSLIGSDR-----VDLIADHFDKLCRGGIEPSGVSAHGFVL 224
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
CK AL R + + G R V N V++ +E+ +LL +
Sbjct: 225 DALFCKGE--VTKALDFHRLVMERGFRVGIVSCNKVLK-GLSVDQIEVASRLLSLVLDCG 281
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
P+++T+ T+I G C G + A+ L K M G P+L+ S + DG ++G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
G + +VV ++S I + + A V RM G N VT LI
Sbjct: 342 KLFSQALHKG-VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
LC G + EA+ + ++++ G+ YSSL+ + L L+ +++ PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 374 TLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKL 433
+ +L+ L + +L +++ +G G C+ N EA K+
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRF--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 434 AKIM 437
++M
Sbjct: 519 FRLM 522
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 18/305 (5%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D AL V R M +G +PD + V+R+ +G +E L M PD + Y T+
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I+ C +P L M+ + S ++ V + + L + + G
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE-GK 631
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
P++VTY ++I +C + +EA + + ++ N VT LI LC ++ A
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 326 RLVDKLVEHG-----VSYG---DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
R+ + E G V+YG D +S V +E + KLF E+ + P ++
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSV-------DIEGSFKLFEEMQEKGISPSIVSY 744
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIM 437
S+++ LC + RV + + + + G C+ L EA L + M
Sbjct: 745 SIIIDGLCKRGRVDEATNIFH--QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Query: 438 LKKSV 442
L+ V
Sbjct: 803 LRNGV 807
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 10/218 (4%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
D + NVVI L K +E K + PD++TY TMI G C+ R ++A +
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+ ++V PN V L+ + LC++ + G +PN VTY L+ F +
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSK 718
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA----YRLVD-KLVEHGVS 337
+ + + M+ G + V+ +ID LC +G V+EA ++ +D KL+ V+
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 338 YGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
Y+ L+ ++ RL EA L+ +L +KPD L
Sbjct: 779 ----YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 2/277 (0%)
Query: 129 VNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLR 188
V F V+++ + AL++ +M G PD + Y +I CK +G +L
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 189 EMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG 248
M + D+ +I L R EDA ++ P++V + + G C S
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC-SL 649
Query: 249 SXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTA 308
K PN VT T LI C+ + + A+ + M G N VT
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 309 FTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLA 367
L+D +E +++L +++ E G+S YS ++ L + R++EA +F + +
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Query: 368 GELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+L PD +A ++L++ C R+++ L + M G
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+ +M++ G P V Y+++I CK+G V+ + + + PD++ Y +I G C
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Query: 211 NAGRPEDAYSLLKDMRVHGCSPN 233
GR +A L + M +G P+
Sbjct: 788 KVGRLVEAALLYEHMLRNGVKPD 810
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 124/293 (42%), Gaps = 5/293 (1%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G PD ++ I CK G VE KL +M + P+++T+ T+I+GL GR ++A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
+ + M G P L+ S + GL R+ K G PNV+ Y +LI
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG-FPPNVIVYNNLID 373
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
SF E N+A+ + D M + G T TLI C G + A RL+ +++ G +
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 339 GD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
++S++ L + A + E+L + P + L+ LC + L
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 398 DAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKS-VLLRPPYQ 449
N G GLC+ L EA ++ K +L + V+ R Y
Sbjct: 494 FQFLNKG--FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC+ +L D A + +++ G D V YN +I CC K ++ L EM P
Sbjct: 515 LCEAGKL-DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D TY +I GL N + E+A D + +G P++ S + DG C++
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA-ERTEEGQEF 632
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
S + +PN V Y LI+++C + + AL + + M+ G N T +LI +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
VEEA L +++ G+ Y++L+ ++ ++ + E L RE+ + + P+ +
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMG 404
++++ V + LL+ M G
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKG 780
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 9/294 (3%)
Query: 44 GSVENSLSKIKPKLDSQCVIQ------VVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMY 97
G ++ + K L CV+ ++S CC K+ F+ + G + Y Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 98 RK-ASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKME 156
L +++ + I + + G + V + ++ C +A+ + +M
Sbjct: 579 SILICGLFNMNKVEEAI-QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 157 DFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPE 216
+P+TV+YN +IR C+ G + M +L +M P+ TY ++I+G+ R E
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 217 DAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
+A L ++MR+ G PN+ +A+ DG + G S + PN +TYT +
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ-MVKVECLLREMHSKNVHPNKITYTVM 756
Query: 277 IQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
I + EA +L+ MR G + + +T I +G V EA++ D+
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 8/238 (3%)
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
YN +I+ CK G + E+LL+EM + ++ ++I LC+ + A + +M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG---DCRPNVVTYTSLIQSFCER 283
+ SP +L+ + GLC+ G G D R T +L+ CE
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR----TSNALLHGLCEA 518
Query: 284 SQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CY 342
+ +EA + + GC+ + V+ TLI C K ++EA+ +D++V+ G+ + Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
S L+ L + ++EEA + + + + PD S+++ C +R +G D M
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 122 AEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
++G +T + + ++K CK Q AD A +L++M G + + VI L C
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQ-ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
+ + + EM L + P T+I GLC G+ A L G + +A+
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
GLC +G G C + V+Y +LI C + + +EA LD M G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRG-CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV---SYGDCYSSLVISLIRIKRLEE 357
++ T LI L + VEEA + D +G+ Y YS ++ + +R EE
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY--TYSVMIDGCCKAERTEE 628
Query: 358 AEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++ F E+++ ++P+T+ + L++ C R+ L + M++ G
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G PD Y+V+I CCK E G++ EM + P+ + Y +I C +GR A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
L +DM+ G SPN +++ G+ G PNV YT+LI
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALID 723
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
+ + Q + +L M + N +T +I G V EA RL++++ E G+
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 124/293 (42%), Gaps = 5/293 (1%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G PD ++ I CK G VE KL +M + P+++T+ T+I+GL GR ++A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
+ + M G P L+ S + GL R+ K G PNV+ Y +LI
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG-FPPNVIVYNNLID 373
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
SF E N+A+ + D M + G T TLI C G + A RL+ +++ G +
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 339 GD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
++S++ L + A + E+L + P + L+ LC + L
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 398 DAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKS-VLLRPPYQ 449
N G GLC+ L EA ++ K +L + V+ R Y
Sbjct: 494 FQFLNKG--FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC+ +L D A + +++ G D V YN +I CC K ++ L EM P
Sbjct: 515 LCEAGKL-DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D TY +I GL N + E+A D + +G P++ S + DG C++
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA-ERTEEGQEF 632
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
S + +PN V Y LI+++C + + AL + + M+ G N T +LI +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
VEEA L +++ G+ Y++L+ ++ ++ + E L RE+ + + P+ +
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMG 404
++++ V + LL+ M G
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKG 780
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 9/294 (3%)
Query: 44 GSVENSLSKIKPKLDSQCVIQ------VVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMY 97
G ++ + K L CV+ ++S CC K+ F+ + G + Y Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 98 RK-ASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKME 156
L +++ + I + + G + V + ++ C +A+ + +M
Sbjct: 579 SILICGLFNMNKVEEAI-QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 157 DFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPE 216
+P+TV+YN +IR C+ G + M +L +M P+ TY ++I+G+ R E
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 217 DAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
+A L ++MR+ G PN+ +A+ DG + G S + PN +TYT +
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ-MVKVECLLREMHSKNVHPNKITYTVM 756
Query: 277 IQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
I + EA +L+ MR G + + +T I +G V EA++ D+
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 8/238 (3%)
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
YN +I+ CK G + E+LL+EM + ++ ++I LC+ + A + +M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG---DCRPNVVTYTSLIQSFCER 283
+ SP +L+ + GLC+ G G D R T +L+ CE
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR----TSNALLHGLCEA 518
Query: 284 SQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CY 342
+ +EA + + GC+ + V+ TLI C K ++EA+ +D++V+ G+ + Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
S L+ L + ++EEA + + + + PD S+++ C +R +G D M
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 122 AEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
++G +T + + ++K CK Q AD A +L++M G + + VI L C
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQ-ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
+ + + EM L + P T+I GLC G+ A L G + +A+
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
GLC +G G C + V+Y +LI C + + +EA LD M G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRG-CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV---SYGDCYSSLVISLIRIKRLEE 357
++ T LI L + VEEA + D +G+ Y YS ++ + +R EE
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY--TYSVMIDGCCKAERTEE 628
Query: 358 AEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++ F E+++ ++P+T+ + L++ C R+ L + M++ G
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G PD Y+V+I CCK E G++ EM + P+ + Y +I C +GR A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
L +DM+ G SPN +++ G+ G PNV YT+LI
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALID 723
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
+ + Q + +L M + N +T +I G V EA RL++++ E G+
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 6/321 (1%)
Query: 83 WAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEA 142
WA G++HS+ Y A +LG + + + +E + +VT+N ++++ A
Sbjct: 110 WAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDK-LVTLNTVAKIMRRFAGA 168
Query: 143 QLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITY 202
+ A+ + ++ +FG +T N+++ CK+ VE +L ++ S P+ T+
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTF 227
Query: 203 ITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK 262
I G C A R E+A +++M+ HG P ++ + I C+
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVE 322
+G PN +TYT+++ S + ++ EAL V RM+ GC + + LI +L G +E
Sbjct: 288 NGSP-PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 323 EAYRLVD-KLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGEL-KPDTLASSL 379
EA R+ ++ E GVS Y+S++ ++A +L +E+ + L PD
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 380 LLKELCMKDRVLDGFYLLDAM 400
LL+ + V++ LL M
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEM 427
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 6/264 (2%)
Query: 128 TVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
T N+F + CK A + ALW +++M+ G RP + Y +IR C++ + ++L
Sbjct: 226 TFNIF--IHGWCK-ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
EM + + P+ ITY T++ L E+A + M+ GC P+ + + + L R+
Sbjct: 283 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 342
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG-CLANHV 306
G N TY S+I +C + ++A+ +L M + C +
Sbjct: 343 GRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVH 402
Query: 307 TAFTLIDSLCDKGCVEEAYRLVDKLV-EHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRE 364
T L+ S +G V E +L+ ++V +H +S + Y+ L+ L R E A LF E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 365 LLAGELKPDTLASSLLLKELCMKD 388
+++ ++ P LLL+E+ K+
Sbjct: 463 MISQDITPRHRTCLLLLEEVKKKN 486
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 86/217 (39%), Gaps = 2/217 (0%)
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR 172
+ +++ EA G + ++ + + AL V +M+ G +PD++ YN +I
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIH 337
Query: 173 LCCKKGDVEMGEKLLR-EMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG-C 230
+ G +E E++ R EM + TY +MI C+ + A LLK+M C
Sbjct: 338 TLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC 397
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
+P++ + + G + TYT LIQ C + A
Sbjct: 398 NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAY 457
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
+ + M + H T L++ + K E A R+
Sbjct: 458 CLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%)
Query: 264 GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEE 323
GD + T +++ F +W EA+ + DR+ FG N + L+D+LC + VE+
Sbjct: 149 GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQ 208
Query: 324 AYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
A ++ +L H ++ + + R+EEA +E+ +P ++ + +++
Sbjct: 209 ARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRC 268
Query: 384 LCMKDRVLDGFYLLDAMENMG 404
C + + + +L ME G
Sbjct: 269 YCQQFEFIKVYEMLSEMEANG 289
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 6/321 (1%)
Query: 83 WAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEA 142
WA G++HS+ Y A +LG + + + +E + +VT+N ++++ A
Sbjct: 110 WAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDK-LVTLNTVAKIMRRFAGA 168
Query: 143 QLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITY 202
+ A+ + ++ +FG +T N+++ CK+ VE +L ++ S P+ T+
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTF 227
Query: 203 ITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK 262
I G C A R E+A +++M+ HG P ++ + I C+
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVE 322
+G PN +TYT+++ S + ++ EAL V RM+ GC + + LI +L G +E
Sbjct: 288 NGSP-PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 323 EAYRLVD-KLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGEL-KPDTLASSL 379
EA R+ ++ E GVS Y+S++ ++A +L +E+ + L PD
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 380 LLKELCMKDRVLDGFYLLDAM 400
LL+ + V++ LL M
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEM 427
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 6/264 (2%)
Query: 128 TVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
T N+F + CK A + ALW +++M+ G RP + Y +IR C++ + ++L
Sbjct: 226 TFNIF--IHGWCK-ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
EM + + P+ ITY T++ L E+A + M+ GC P+ + + + L R+
Sbjct: 283 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 342
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG-CLANHV 306
G N TY S+I +C + ++A+ +L M + C +
Sbjct: 343 GRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVH 402
Query: 307 TAFTLIDSLCDKGCVEEAYRLVDKLV-EHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRE 364
T L+ S +G V E +L+ ++V +H +S + Y+ L+ L R E A LF E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 365 LLAGELKPDTLASSLLLKELCMKD 388
+++ ++ P LLL+E+ K+
Sbjct: 463 MISQDITPRHRTCLLLLEEVKKKN 486
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 86/217 (39%), Gaps = 2/217 (0%)
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR 172
+ +++ EA G + ++ + + AL V +M+ G +PD++ YN +I
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIH 337
Query: 173 LCCKKGDVEMGEKLLR-EMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG-C 230
+ G +E E++ R EM + TY +MI C+ + A LLK+M C
Sbjct: 338 TLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC 397
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
+P++ + + G + TYT LIQ C + A
Sbjct: 398 NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAY 457
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
+ + M + H T L++ + K E A R+
Sbjct: 458 CLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%)
Query: 264 GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEE 323
GD + T +++ F +W EA+ + DR+ FG N + L+D+LC + VE+
Sbjct: 149 GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQ 208
Query: 324 AYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
A ++ +L H ++ + + R+EEA +E+ +P ++ + +++
Sbjct: 209 ARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRC 268
Query: 384 LCMKDRVLDGFYLLDAMENMG 404
C + + + +L ME G
Sbjct: 269 YCQQFEFIKVYEMLSEMEANG 289
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 6/339 (1%)
Query: 45 SVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLL 104
+ E +L ++D+ QV+ + LG FF W Q G++H + Y L
Sbjct: 312 AAEEALHNFGFRMDAYQANQVLKQMDNYANALG--FFYWLKRQPGFKHDGHTYTTMVGNL 369
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
G + I L++ +GC + ++ A A+ V +M++ G PD
Sbjct: 370 GRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDR 429
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
V Y +I + K G +++ + + M + PD TY +I L AG A+ L +
Sbjct: 430 VTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCE 489
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M GC+PNLV + I L ++ +P+ VTY+ +++
Sbjct: 490 MVGQGCTPNLVTFN-IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCG 548
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV--SYGDCY 342
EA V M+ + + L+D G V++A++ +++ G+ + C
Sbjct: 549 FLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTC- 607
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+SL+ + +R+ R+ EA L + +LA L P +LLL
Sbjct: 608 NSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D TY TM+ L A + + LL +M GC PN V + + R+
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G C P+ VTY +LI + + A+++ RM+ G + T +I+ L
Sbjct: 418 NQMQEAG-CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGK 476
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVISL-IRIKRLEEAEKLFRELLAGELKPDTLA 376
G + A+RL ++V G + +++I+L + + E A KL+R++ +PD +
Sbjct: 477 AGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVT 536
Query: 377 SSLLLKEL 384
S++++ L
Sbjct: 537 YSIVMEVL 544
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 25/339 (7%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G P +N V+ CK G V+ E ++ M PD+I+Y ++I+G C G A
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 219 YSLLKDMRV-HG--CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTS 275
+L+ +R HG C P++V +++F+G + K C PNVVTY++
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC--CSPNVVTYST 168
Query: 276 LIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
I +FC+ + AL M+ N VT LID C G +E A L ++
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 336 VSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGF 394
+S Y++L+ + ++ AE+++ ++ ++P++L + ++ + +
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 395 YLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL----------- 443
L M N G GLC L EAT++ + M K ++
Sbjct: 289 KFLAKMLNQG--MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 444 --LRPPYQDSAID----ILRKSEEKDLVDLVNQLTGIRK 476
+ +A++ ++ + E D+V L + GI K
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 7/239 (2%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
+D A+ L KM + G R D Y V+I C G ++ +++ +M SD PD++ + T
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
M+ +GR + A ++ + G P++V LS + DG+ ++G
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE---- 399
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
+ N V YT LI + C+ + E + ++ G + + + I LC +G + +A
Sbjct: 400 --KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 325 YRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
++L ++V+ G+ Y++L+ L + EA ++F E+L + PD+ LL++
Sbjct: 458 FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 7/268 (2%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC- 196
+CK Q+ A ++ M FG PD + YN +I C+ GD+ +L + S
Sbjct: 66 VCKLGQVK-FAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFI 124
Query: 197 --PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
PD++++ ++ G ++ + + M + CSPN+V S D C+SG
Sbjct: 125 CKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
+ PNVVT+T LI +C+ A+++ MR N VT LID
Sbjct: 184 KSFHSMKRDA-LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
C KG ++ A + ++VE V Y++++ + + A K ++L ++ D
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
Query: 374 TLASSLLLKELCMKDRVLDGFYLLDAME 401
A +++ LC ++ + +++ ME
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDME 330
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 143/361 (39%), Gaps = 47/361 (13%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CK +L +AL M+ P+ V + +I CK GD+E+ L +EM
Sbjct: 173 FCKSGEL-QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL 231
Query: 198 DLITYITMIEGLCNAG---RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
+++TY +I+G C G R E+ YS + + RV PN +V + I DG + G
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE---PNSLVYTTIIDGFFQRGDSDNAM 288
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
G R ++ Y +I C + EA +++ M + + V T++++
Sbjct: 289 KFLAKMLNQG-MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 315 LCDKGCVEEAYRLVDKLVEHGV-------------------------------SYGDCYS 343
G ++ A + KL+E G + Y+
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYT 407
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENM 403
L+ +L + E E+LF ++ L PD + + LC + ++D F L M
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 404 GCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAI-DILRKSEEK 462
G GL K + EA ++ ML + P DSA+ D+L ++ EK
Sbjct: 468 G--LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI---SP--DSAVFDLLIRAYEK 520
Query: 463 D 463
+
Sbjct: 521 E 521
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 2/248 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G +P Y V+++ G++ L++M + + +Y +I+ LC A R E+A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
L +M+ G SPNLV + G G G +P+V+T++ +I
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHG-FKPDVITFSLIIN 503
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
C + +A + M +G N +T LI S C G + + +L K+ E+G+S
Sbjct: 504 CLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSP 563
Query: 339 G-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
Y++ + S +++++++AE+L + +L LKPD S L+K L R + +
Sbjct: 564 DLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMF 623
Query: 398 DAMENMGC 405
++E GC
Sbjct: 624 SSIERHGC 631
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 122 AEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
+G + +V + V+ LCK ++ + A++ L +M+D G P+ V +N + +GDV
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMF-LTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
+ +L ++ + PD+IT+ +I LC A +DA+ K+M G PN + + +
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
C +G ++G P++ Y + IQSFC+ + +A +L M G
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENG-LSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIG 595
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
++ T TLI +L + G EA + + HG
Sbjct: 596 LKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 2/282 (0%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
G + ++ V+ ++ D+A ++M G +PD YN++I CKKG V+
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
+L+++M P++ TY +I+G AGR ++A L+ MRV +PN + G
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
+ R + D V Y +++ S E L ++ G +
Sbjct: 295 IFRCLPPCKAFEVLVGFMEK-DSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLF 362
+ T + L + E R+ D V GV G + Y LV +L+ +R E ++
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 363 RELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+++ L + + ++ LC R+ + L M++ G
Sbjct: 414 KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
D ++ + KM++ G PD YN I+ CK V+ E+LL+ M PD TY T
Sbjct: 546 TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYST 605
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
+I+ L +GR +A + + HGC P+
Sbjct: 606 LIKALSESGRESEAREMFSSIERHGCVPD 634
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 140/301 (46%), Gaps = 7/301 (2%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTV 165
+D +M+ + I+S + V N + CK ++ + A + M G PD V
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNAL--ISGFCKAGRI-EKAEALKSYMSKIGCEPDLV 256
Query: 166 MYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS-LLKD 224
YNV++ ++ E ++ EM S D +Y +++ C P+ Y+ ++K+
Sbjct: 257 TYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE 316
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M G ++V S + + CR+ + + G NVVTYTSLI++F
Sbjct: 317 MEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVM-NVVTYTSLIKAFLREG 374
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY-GDCYS 343
+ A +LD+M G + + T++D LC G V++AY + + ++EH ++ Y+
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENM 403
SL+ L R R+ EA KLF ++ E PD L ++ L ++ + + D M +
Sbjct: 435 SLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK 494
Query: 404 G 404
G
Sbjct: 495 G 495
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 6/292 (2%)
Query: 164 TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLK 223
TV+YN +I CK G +E E L MS PDL+TY ++ + + A ++
Sbjct: 220 TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMA 279
Query: 224 DMRVHGCSPNLVVLSAIFDGLCR-SGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+M G + + + CR S G C +VV+Y++LI++FC
Sbjct: 280 EMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC--DVVSYSTLIETFCR 337
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC- 341
S +A + + MR G + N VT +LI + +G A +L+D++ E G+S
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIF 397
Query: 342 YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
Y++++ L + +++A +F +++ E+ PD ++ + L+ LC RV + L + M+
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Query: 402 NMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAI 453
C GL + L+ A K+ M+ K L D+ I
Sbjct: 458 GKEC--CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 119/276 (43%), Gaps = 8/276 (2%)
Query: 133 REVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSL 192
R + LCK + D+ +L ME G PD +NV + L C++ V + M
Sbjct: 84 RFISGLCKVKKF-DLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 193 SDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXX 252
PD+++Y +I GL AG+ DA + M G SP+ +A+ GLC +
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 253 XXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLI 312
KS + + V Y +LI FC+ + +A + M GC + VT L+
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 313 DSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKP 372
+ D ++ A ++ ++V G+ D YS + L R R+ +K + + E++P
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQL-DAYSYNQL-LKRHCRVSHPDKCY-NFMVKEMEP 319
Query: 373 ----DTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
D ++ S L++ C + L + M G
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 155/396 (39%), Gaps = 42/396 (10%)
Query: 83 WAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKL-CKE 141
W G+ + Y + S L + +I L+ E G + + F L L C+E
Sbjct: 68 WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 142 AQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLIT 201
++ A+ M G PD V Y ++I + G V ++ M S PD
Sbjct: 128 NKVG-FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 202 YITMIEGLCNAGRPEDAYSLL-KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXX 260
++ GLC+A + + AY ++ ++++ + VV +A+ G C++G
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 261 XKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG---------------CLANH 305
K G C P++VTY L+ + + + A V+ M G C +H
Sbjct: 247 SKIG-CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 306 --------------------VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSS 344
V+ TLI++ C +AYRL +++ + G+ Y+S
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 345 LVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L+ + +R A+KL ++ L PD + + +L LC V + + + M +
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDM--IE 423
Query: 405 CXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKK 440
GLC+ + EA KL + M K
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A + +M G + V Y +I+ ++G+ + +KLL +M+ PD I Y T+++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
LC +G + AY + DM H +P+ + +++ GLCRSG K +C
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR-VTEAIKLFEDMKGKECC 462
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
P+ +T+ +I + + A V D+M G + + TLI + C
Sbjct: 463 PDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
G V+ + ++ L +++ A+ V R+M G RP Y+ ++ K+ D++
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
LL+EM P++ T+ I L AG+ +AY +LK M GC P++V + + D
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
LC + K+G +P+ VTY +L+ F + + M G +
Sbjct: 303 LC-TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLF 362
+ VT L+D+LC G EA+ +D + + G+ Y++L+ L+R+ RL++A +LF
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 363 RELLAGELKP 372
+ + +KP
Sbjct: 422 GNMESLGVKP 431
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 9/341 (2%)
Query: 67 SRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCV 126
SR C + ++ R + G+R S Y LG R+ + L++ E G
Sbjct: 201 SRFCTEAMEVYRRMIL-----EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 127 VTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKL 186
V F +++ A + A +L++M+D G PD V Y V+I C ++ +++
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 187 LREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR 246
+M PD +TYIT+++ + + +M G P++V + + D LC+
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 247 SGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHV 306
+G+ G PN+ TY +LI + ++AL + M + G
Sbjct: 376 AGNFGEAFDTLDVMRDQG-ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 307 TAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG--DCYSSLVISLIRIKRLEEAEKLFRE 364
T ID G A +K+ G++ C +SL SL + R EA+++F
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY-SLAKAGRDREAKQIFYG 493
Query: 365 LLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
L L PD++ ++++K + + LL M GC
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 1/265 (0%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
CK ++ + +D G +P YN++I + +E+ + + ++ + PD
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
+ TY +++ +G+ ++ + L K+M H C N + + + GL ++G+
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
D P TY LI + + EA + + M +GC N LI+
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 319 GCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
G + A L ++V+ GV YS LV L + R++E F+EL L PD +
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 378 SLLLKELCMKDRVLDGFYLLDAMEN 402
+L++ L R+ + L + M+
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKT 1024
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 133/293 (45%), Gaps = 4/293 (1%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
D+ ++ GC+ V + +L ++ D + ++M +T+ +N+VI
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 175 CKKGDVEMGEKLLRE-MSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
K G+V+ L + MS D P TY +I+GL +GR +A L + M +GC PN
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
+ + + +G ++G K G RP++ TY+ L+ C + +E L+
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEG-VRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL-VEHGVSYG-DCYSSLVISLIR 351
++ G + V +I+ L +EEA L +++ G++ Y+SL+++L
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 352 IKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+EEA K++ E+ L+P+ + L++ + + + + M G
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 11/283 (3%)
Query: 89 GYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVA 148
G + +AY Y G + + E + +G + L +A A
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEG 208
+ ++D G PD+V YN++++ K G+++ KLL EM + PD+I ++I
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 209 LCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRP 268
L A R ++A+ + M+ P +V + + GL ++G + G C P
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG-CPP 606
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA---Y 325
N +T+ +L C+ + AL +L +M GC+ + T T+I L G V+EA +
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 326 RLVDKLVEHGVSYGDCYS--SLVISLIRIKRLEEAEKLFRELL 366
+ KLV Y D + +L+ +++ +E+A K+ L
Sbjct: 667 HQMKKLV-----YPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 4/287 (1%)
Query: 121 EAEGCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGD 179
E +G V V F ++ LCK + A L M D G P+ YN +I +
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGE-AFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 180 VEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSA 239
++ +L M P TYI I+ +G A + M+ G +PN+V +A
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 240 IFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAF 299
L ++G G P+ VTY +++ + + + +EA+ +L M
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIG-LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 300 GCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEA 358
GC + + +LI++L V+EA+++ ++ E + Y++L+ L + +++EA
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 359 EKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
+LF ++ P+T+ + L LC D V +L M +MGC
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
L K +L + A + M D+G RP+ +YN++I K G+ + L + M P
Sbjct: 901 LSKSGRLYE-AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
DL TY +++ LC GR ++ K+++ G +P++V + I +GL +S
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
S P++ TY SLI + EA + + ++ G N T LI
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 318 KGCVEEAYRLVDKLVEHGVS 337
G E AY + +V G S
Sbjct: 1080 SGKPEHAYAVYQTMVTGGFS 1099
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 2/193 (1%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L E GC ++ ++ +A AD A + ++M G RPD Y+V++ C
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRV-HGCSPNL 234
G V+ G +E+ S PD++ Y +I GL + R E+A L +M+ G +P+L
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+++ L +G ++G PNV T+ +LI+ + + A V
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAG-LEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Query: 295 RMRAFGCLANHVT 307
M G N T
Sbjct: 1092 TMVTGGFSPNTGT 1104
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
+ D V+ ++ CK G+ + L EM P+++TY MI+ C++GR DA
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
LL+ M +P++V SA+ + + + P +TY S+I F
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS-IFPTTITYNSMIDGF 125
Query: 281 CERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYG 339
C++ + ++A +LD M + GC + VT TLI+ C V+ + ++ G V+
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 340 DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDA 399
Y++L+ ++ L+ A+ L E+++ + PD + +L LC K + F +L+
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 400 ME 401
++
Sbjct: 246 LQ 247
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C + +D A +LR M + PD V ++ +I K+ V E++ +EM P
Sbjct: 55 FCHSGRWSD-ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP 113
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
ITY +MI+G C R +DA +L M GCSP++V S + +G C++
Sbjct: 114 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G N VTYT+LI FC+ + A ++L+ M + G +++T ++ LC
Sbjct: 174 CEMHRRG-IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 232
Query: 318 KGCVEEAYRLVDKL 331
K + +A+ +++ L
Sbjct: 233 KKELRKAFAILEDL 246
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
V +LCK+ + A + +M + G P+ + YN +I C G ++LLR M
Sbjct: 17 VDRLCKDGNHIN-AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
PD++T+ +I + +A + K+M P + +++ DG C+
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
G C P+VVT+++LI +C+ + + + + M G +AN VT TLI
Sbjct: 136 RMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 315 LCDKGCVEEAYRLVDKLVEHGVS 337
C G ++ A L+++++ GV+
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVA 217
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 4/242 (1%)
Query: 190 MSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGS 249
M S D++ +++ LC G +A +L +M G PN++ + + D C SG
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 250 XXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAF 309
+ P++VT+++LI +F + + +EA + M + +T
Sbjct: 61 WSDADQLLRHMIEK-QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 310 TLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAG 368
++ID C + V++A R++D + G S +S+L+ + KR++ ++F E+
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 369 ELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLA 428
+ +T+ + L+ C + LL+ M + C GLC K L
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM--ISCGVAPDYITFHCMLAGLCSKKELR 237
Query: 429 EA 430
+A
Sbjct: 238 KA 239
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+++S ++GC V F ++ +A+ D + + +M G +TV Y +I C
Sbjct: 137 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 196
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
+ GD++ + LL EM PD IT+ M+ GLC+ A+++L+D++
Sbjct: 197 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 157/397 (39%), Gaps = 53/397 (13%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+ E+ A G TV F ++ + L + A+ V M+++G RP+ V YN VI C
Sbjct: 255 IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314
Query: 176 KKG-DVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
K G + + K EM + PD IT+ +++ G E A +L +M ++
Sbjct: 315 KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDV 374
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+ + D +C+ G PNVV+Y+++I F + +++EALN+
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVK-RIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV------------SYGD-- 340
MR G + V+ TL+ G EEA ++ ++ G+ YG
Sbjct: 434 EMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493
Query: 341 ----------------------CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
YS+L+ + +EA ++FRE + L+ D + S
Sbjct: 494 KYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYS 553
Query: 379 LLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIML 438
L+ LC V L+D M G + N + +A + M
Sbjct: 554 ALIDALCKNGLVGSAVSLIDEMTKEGI------------SPNVVTYNSIIDAFGRSATMD 601
Query: 439 KKSVLLRP---PYQDSAIDILRKSEEKDLVDLVNQLT 472
+ + P+ SA+ L ++E ++ L QLT
Sbjct: 602 RSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLT 638
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 2/223 (0%)
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
YN ++ + G VE ++L EM PD+ T+ T++ G C G +A + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
GC P+ ++ G CR ++G C N V+YT LI E +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG-CHRNEVSYTQLIYGLFEAKKI 241
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSL 345
+EAL++L +M+ C N T LID+LC G EA L ++ E G+ DC Y+ L
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 346 VISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKD 388
+ S L+EA L +L L P+ + + L+K C K+
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN 344
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 150 WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGL 209
W+++ G PD Y I C++ +V+ K+ +EM+ + + ++Y +I GL
Sbjct: 180 WLIQA----GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL 235
Query: 210 CNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPN 269
A + ++A SLL M+ C PN+ + + D LC SG +SG +P+
Sbjct: 236 FEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG-IKPD 294
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD 329
YT LIQSFC +EA +L+ M G + N +T LI C K V +A L+
Sbjct: 295 DCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLS 353
Query: 330 KLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
K++E V Y++L+ L+ A +L + L P+
Sbjct: 354 KMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
EA+ D AL +L KM+D P+ Y V+I C G L ++MS S PD
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXX 260
Y +I+ C+ ++A LL+ M +G PN++ +A+ G C+
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKML 356
Query: 261 XKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTA 308
+ + P+++TY +LI C + A +L M G + N T
Sbjct: 357 EQ--NLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 156/358 (43%), Gaps = 7/358 (1%)
Query: 46 VENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLG 105
++NS+ + P+ D V V+ K+ + ++FF W RH + K +LG
Sbjct: 104 LQNSIRDLVPEWDHSLVYNVLHGA--KKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLG 161
Query: 106 -IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
+ + C L++ E +G +MF +++ +A + ++ + +KM+D G
Sbjct: 162 EVSKLNHARCILLDMPE-KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTI 220
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
YN + ++ ++G M ++ +M P TY M+ G + R E A +D
Sbjct: 221 KSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFED 280
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M+ G SP+ + + +G CR K P+VV+YT++I+ +
Sbjct: 281 MKTRGISPDDATFNTMINGFCRF-KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD--CY 342
+ ++ L + + MR+ G N T TL+ LCD G + EA ++ ++ ++ D +
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIF 399
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
L++S + + A ++ + + + + +L++ C LLD +
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTL 457
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 4/246 (1%)
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D T++ MI+ L + A +L DM G + + + + ++G
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 208
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
G R + +Y SL + R ++ A ++M + G T ++
Sbjct: 209 QKMKDLGVER-TIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFL 267
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
+E A R + + G+S D +++++ R K+++EAEKLF E+ ++ P ++
Sbjct: 268 SLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVS 327
Query: 377 SSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKI 436
+ ++K DRV DG + + M + G GLC + EA + K
Sbjct: 328 YTTMIKGYLAVDRVDDGLRIFEEMRSSGI--EPNATTYSTLLPGLCDAGKMVEAKNILKN 385
Query: 437 MLKKSV 442
M+ K +
Sbjct: 386 MMAKHI 391
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 7/238 (2%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM-SLSDACPDLITYITMI 206
A V+R M D G PD + Y +++ C+ G+++MG LL++M S +I M+
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
GLC GR ++A SL M+ G SP+LV S + GLC+ G D
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC---DK 427
Query: 267 R--PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
R PN T+ +L+ C++ EA ++LD + + G + V +ID GC+EEA
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 325 YRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
L ++E G++ ++SL+ + + + EA K+ + L P ++ + L+
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 130/278 (46%), Gaps = 15/278 (5%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK ++ D AL + +M+ G PD V Y++VI CK G +M L EM P
Sbjct: 373 LCKTGRI-DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ T+ ++ GLC G +A SLL + G + ++V+ + + DG +SG
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G P+V T+ SLI +C+ EA +LD ++ +G + V+ TL+D+ +
Sbjct: 492 KVVIETG-ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVIS-------------LIRIKRLEEAEKLFRE 364
G + L ++ G+ + S++ ++R + E+ ++ R+
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610
Query: 365 LLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
+ + + PD + + +++ LC + F L+ M++
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 648
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 4/269 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC +A+ AL + M G PD+V YN++ + G + +++R+M P
Sbjct: 267 LCLVGSIAE-ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP 325
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVV-LSAIFDGLCRSGSXXXXXXX 256
D+ITY ++ G C G + LLKDM G N ++ S + GLC++G
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
G P++V Y+ +I C+ +++ AL + D M L N T L+ LC
Sbjct: 386 FNQMKADG-LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVI-SLIRIKRLEEAEKLFRELLAGELKPDTL 375
KG + EA L+D L+ G + ++VI + +EEA +LF+ ++ + P
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ L+ C + + +LD ++ G
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 12/284 (4%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L++S + G + + ++ V+ ++ + AL + + + + G P +N +I C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
K ++ K+L + L P +++Y T+++ N G + L ++M+ G P V
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXX-----------XKSGDCRPNVVTYTSLIQSFCERS 284
S IF GLCR +S P+ +TY ++IQ C
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYS 343
+ A L+ M++ A+ T LIDSLC G + +A + L E VS Y+
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
+L+ + E A KLF +LL S ++ LC +
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 4/269 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC++ +L D L+ LR E P V +N ++ CK G V+M + + P
Sbjct: 197 LCRQQKLEDAVLF-LRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ ++ +I GLC G +A L DM HG P+ V + + G G
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT-LIDSLC 316
G P+V+TYT L+ C+ + L +L M + G N + + ++ LC
Sbjct: 316 RDMLDKG-LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVI-SLIRIKRLEEAEKLFRELLAGELKPDTL 375
G ++EA L +++ G+S S+VI L ++ + + A L+ E+ + P++
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMG 404
LL LC K +L+ LLD++ + G
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSG 463
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 166/448 (37%), Gaps = 68/448 (15%)
Query: 62 VIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIES-- 119
V +++ + L V FF +RHS++ S +L R + + ++E
Sbjct: 52 VEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLL 111
Query: 120 --------YEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVI 171
+E+ G V + +F L ++ D +L++L+KM+D T YN V+
Sbjct: 112 QEEGTFRKWESTGLVWDMLLF-----LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL 166
Query: 172 ---RLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH 228
R K DV K E TY T+++GLC + EDA L+
Sbjct: 167 YHFRETDKMWDVYKEIKDKNEH----------TYSTVVDGLCRQQKLEDAVLFLRTSEWK 216
Query: 229 GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNE 288
P++V ++I G C+ G K G P+V ++ LI C E
Sbjct: 217 DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG-LVPSVYSHNILINGLCLVGSIAE 275
Query: 289 ALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY---------- 338
AL + M G + VT L G + A+ ++ +++ G+S
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 339 GDCY---------------------------SSLVISLIRIKRLEEAEKLFRELLAGELK 371
G C S ++ L + R++EA LF ++ A L
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 372 PDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEAT 431
PD +A S+++ LC + +L D M + GLCQK L EA
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK--RILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 432 KLAKIMLKKSVLLRPPYQDSAIDILRKS 459
L ++ L + ID KS
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKS 481
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 3/236 (1%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM-SLSDACPDLITYITMI 206
A V+R M D G PD + Y +++ C+ G+++MG LL++M S +I M+
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
GLC GR ++A SL M+ G SP+LV S + GLC+ G
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK-RI 429
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYR 326
PN T+ +L+ C++ EA ++LD + + G + V +ID GC+EEA
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 327 LVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
L ++E G++ ++SL+ + + + EA K+ + L P ++ + L+
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 130/278 (46%), Gaps = 15/278 (5%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK ++ D AL + +M+ G PD V Y++VI CK G +M L EM P
Sbjct: 373 LCKTGRI-DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ T+ ++ GLC G +A SLL + G + ++V+ + + DG +SG
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G P+V T+ SLI +C+ EA +LD ++ +G + V+ TL+D+ +
Sbjct: 492 KVVIETG-ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVIS-------------LIRIKRLEEAEKLFRE 364
G + L ++ G+ + S++ ++R + E+ ++ R+
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610
Query: 365 LLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
+ + + PD + + +++ LC + F L+ M++
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 648
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 4/269 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC +A+ AL + M G PD+V YN++ + G + +++R+M P
Sbjct: 267 LCLVGSIAE-ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP 325
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVV-LSAIFDGLCRSGSXXXXXXX 256
D+ITY ++ G C G + LLKDM G N ++ S + GLC++G
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
G P++V Y+ +I C+ +++ AL + D M L N T L+ LC
Sbjct: 386 FNQMKADG-LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVI-SLIRIKRLEEAEKLFRELLAGELKPDTL 375
KG + EA L+D L+ G + ++VI + +EEA +LF+ ++ + P
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ L+ C + + +LD ++ G
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 12/284 (4%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L++S + G + + ++ V+ ++ + AL + + + + G P +N +I C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
K ++ K+L + L P +++Y T+++ N G + L ++M+ G P V
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXX-----------XKSGDCRPNVVTYTSLIQSFCERS 284
S IF GLCR +S P+ +TY ++IQ C
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYS 343
+ A L+ M++ A+ T LIDSLC G + +A + L E VS Y+
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
+L+ + E A KLF +LL S ++ LC +
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 4/269 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC++ +L D L+ LR E P V +N ++ CK G V+M + + P
Sbjct: 197 LCRQQKLEDAVLF-LRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ ++ +I GLC G +A L DM HG P+ V + + G G
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT-LIDSLC 316
G P+V+TYT L+ C+ + L +L M + G N + + ++ LC
Sbjct: 316 RDMLDKG-LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVI-SLIRIKRLEEAEKLFRELLAGELKPDTL 375
G ++EA L +++ G+S S+VI L ++ + + A L+ E+ + P++
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMG 404
LL LC K +L+ LLD++ + G
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSG 463
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 166/448 (37%), Gaps = 68/448 (15%)
Query: 62 VIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIES-- 119
V +++ + L V FF +RHS++ S +L R + + ++E
Sbjct: 52 VEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLL 111
Query: 120 --------YEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVI 171
+E+ G V + +F L ++ D +L++L+KM+D T YN V+
Sbjct: 112 QEEGTFRKWESTGLVWDMLLF-----LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL 166
Query: 172 ---RLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH 228
R K DV K E TY T+++GLC + EDA L+
Sbjct: 167 YHFRETDKMWDVYKEIKDKNEH----------TYSTVVDGLCRQQKLEDAVLFLRTSEWK 216
Query: 229 GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNE 288
P++V ++I G C+ G K G P+V ++ LI C E
Sbjct: 217 DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG-LVPSVYSHNILINGLCLVGSIAE 275
Query: 289 ALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY---------- 338
AL + M G + VT L G + A+ ++ +++ G+S
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 339 GDCY---------------------------SSLVISLIRIKRLEEAEKLFRELLAGELK 371
G C S ++ L + R++EA LF ++ A L
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 372 PDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEAT 431
PD +A S+++ LC + +L D M + GLCQK L EA
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK--RILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 432 KLAKIMLKKSVLLRPPYQDSAIDILRKS 459
L ++ L + ID KS
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKS 481
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 2/214 (0%)
Query: 153 RKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA 212
R M G PD V ++ +I CK G V G LLREM P+ +TY T+++ L A
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 307
Query: 213 GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVT 272
A +L M V G +LVV + + DGL ++G + PNVVT
Sbjct: 308 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV-PNVVT 366
Query: 273 YTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV 332
YT+L+ C+ + A ++ +M + N VT ++I+ KG +EEA L+ K+
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Query: 333 EHG-VSYGDCYSSLVISLIRIKRLEEAEKLFREL 365
+ V G Y +++ L + + E A +L +E+
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 138/343 (40%), Gaps = 35/343 (10%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+ KM G PD NV+I CK G + LLR +S D +TY T+I GLC
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVISGLC 172
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK-------- 262
G ++AY L +M G P+ V + + DG C+ G+ +
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 232
Query: 263 --------------------SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
SG P+VVT++S+I C+ + E +L M
Sbjct: 233 LLSSYYNLHAIEEAYRDMVMSG-FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKL 361
NHVT TL+DSL A L ++V G+ Y+ L+ L + L EAEK
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 362 FRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGL 421
F+ LL P+ + + L+ LC + +++ M + G
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM--LEKSVIPNVVTYSSMINGY 409
Query: 422 CQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKSEEKDL 464
+K L EA L + M ++V+ + ID L K+ ++++
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 3/246 (1%)
Query: 137 KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC 196
+LCK ++ + L +LR+ME+ P+ V Y ++ K L +M +
Sbjct: 268 RLCKGGKVLEGGL-LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIP 326
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
DL+ Y +++GL AG +A K + PN+V +A+ DGLC++G
Sbjct: 327 VDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFI 386
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
+ PNVVTY+S+I + ++ EA+++L +M + N T T+ID L
Sbjct: 387 ITQMLEK-SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
G E A L ++ GV + +LV L RI R++E + L +++++ + D +
Sbjct: 446 KAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQI 505
Query: 376 ASSLLL 381
+ L+
Sbjct: 506 NYTSLI 511
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 126/276 (45%), Gaps = 10/276 (3%)
Query: 128 TVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
TV + LC E LAD A L +M G PDTV YN +I CK G+ + L+
Sbjct: 161 TVTYNTVISGLC-EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
E+S +LIT+ ++ N E+AY +DM + G P++V S+I + LC+
Sbjct: 220 DEIS----ELNLITHTILLSSYYNLHAIEEAY---RDMVMSGFDPDVVTFSSIINRLCKG 272
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
G + PN VTYT+L+ S + + + AL + +M G + V
Sbjct: 273 GKVLEGGLLLREMEEM-SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVV 331
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVE-HGVSYGDCYSSLVISLIRIKRLEEAEKLFRELL 366
L+D L G + EA + L+E + V Y++LV L + L AE + ++L
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
+ P+ + S ++ K + + LL ME+
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 11/220 (5%)
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL-KDMRVHGCSPNLVVLSAIFDG 243
+ L M PD + ++I G D SL+ M G SP++ L+ +
Sbjct: 79 RTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHS 138
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
C+ G S D VTY ++I CE +EA L M G L
Sbjct: 139 FCKVGRLSFAISLLRNRVISIDT----VTYNTVISGLCEHGLADEAYQFLSEMVKMGILP 194
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFR 363
+ V+ TLID C G A LVD++ E + ++ L+ S + +EEA +R
Sbjct: 195 DTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI---THTILLSSYYNLHAIEEA---YR 248
Query: 364 ELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENM 403
+++ PD + S ++ LC +VL+G LL ME M
Sbjct: 249 DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEM 288
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 128/266 (48%), Gaps = 8/266 (3%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK L+ A +++ +M + P+ V Y+ +I KKG +E LLR+M + P
Sbjct: 374 LCKAGDLSS-AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVP 432
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ TY T+I+GL AG+ E A L K+MR+ G N +L A+ + L R G
Sbjct: 433 NGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLV 492
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
G + + YTSLI F + AL + M+ G + V+ LI +
Sbjct: 493 KDMVSKG-VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLK 551
Query: 318 KGCV--EEAYR-LVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
G V + AY+ + +K +E ++ ++ ++ S + E KL+ ++ + +KP
Sbjct: 552 FGKVGADWAYKGMREKGIEPDIA---TFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSL 608
Query: 375 LASSLLLKELCMKDRVLDGFYLLDAM 400
++ ++++ LC ++ + ++L+ M
Sbjct: 609 MSCNIVVGMLCENGKMEEAIHILNQM 634
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 37/294 (12%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A W + M + G PD +N+++ K+GD E KL +M P L++ ++
Sbjct: 557 ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVG 616
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLV-------------------------------- 235
LC G+ E+A +L M + PNL
Sbjct: 617 MLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKL 676
Query: 236 ---VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNV 292
V + + LC+ G G P+ VT+ SL+ + S +AL+
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI-PDTVTFNSLMHGYFVGSHVRKALST 735
Query: 293 LDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIR 351
M G N T T+I L D G ++E + + ++ G+ D Y++L+ +
Sbjct: 736 YSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK 795
Query: 352 IKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
I ++ + ++ E++A L P T ++L+ E ++L LL M G
Sbjct: 796 IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 104/273 (38%), Gaps = 39/273 (14%)
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITY------ 202
LW KM+ G +P + N+V+ + C+ G +E +L +M L + P+L TY
Sbjct: 595 LW--DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 203 -----------------------------ITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
T+I LC G + A ++ DM G P+
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
V +++ G GS PNV TY ++I+ + E L
Sbjct: 713 TVTFNSLMHGYF-VGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRI 352
M++ G + T LI G ++ + + +++ G V Y+ L+ +
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
++ +A +L +E+ + P+T ++ LC
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 81/206 (39%), Gaps = 1/206 (0%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+R L + + AD + +G + +YN +I CK G + ++ +M
Sbjct: 646 YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDME 705
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
PD +T+ +++ G A S M G SPN+ + I GL +G
Sbjct: 706 ARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAG-LI 764
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
KS RP+ TY +LI + ++ + M A G + T L
Sbjct: 765 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 824
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVS 337
I + G + +A L+ ++ + GVS
Sbjct: 825 ISEFANVGKMLQARELLKEMGKRGVS 850
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 124 GCVVTVNMFREVLKLCKEAQL-ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
G V + +++ +A L +V W L +M+ G RPD YN +I K G+++
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKW-LSEMKSRGMRPDDFTYNALISGQAKIGNMKG 801
Query: 183 GEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD 242
+ EM P TY +I N G+ A LLK+M G SPN +
Sbjct: 802 SMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Query: 243 GLCR 246
GLC+
Sbjct: 862 GLCK 865
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 161/369 (43%), Gaps = 9/369 (2%)
Query: 39 LHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYR 98
L + ++E L ++K L +++V+ R + + RFF WA + G+ H++ Y
Sbjct: 141 LFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHAR-KPAFRFFCWAAERQGFAHASRTYN 199
Query: 99 KASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDF 158
S+L R + + ++E +G ++T+ F +K A+ A+ + M+ +
Sbjct: 200 SMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVGIFELMKKY 258
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGE--KLLREMSLSDACPDLITYITMIEGLCNAGRPE 216
+ N ++ G ++G+ ++L + P+++TY ++ G C
Sbjct: 259 KFKIGVETINCLLDSL---GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 217 DAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
+A + DM HG P++V + + +GL RS G C PNV +YT +
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC-PNVRSYTIM 374
Query: 277 IQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG- 335
I+ FC++S A+ D M G + LI + ++ Y L+ ++ E G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 336 VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFY 395
G Y++L+ + K E +++ +++ E++P ++++K + G
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 494
Query: 396 LLDAMENMG 404
+ D M G
Sbjct: 495 VWDEMIKKG 503
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 1/189 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ + M+ G P+ Y ++IR CK+ +E + +M S PD Y +I
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G + + Y LLK+M+ G P+ +A+ L + +
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK-LMANQKMPEHGTRIYNKMIQNEIE 470
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P++ T+ +++S+ + V D M G + + LI L +G EA R
Sbjct: 471 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 530
Query: 328 VDKLVEHGV 336
++++++ G+
Sbjct: 531 LEEMLDKGM 539
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 3/312 (0%)
Query: 76 LGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREV 135
L F +A Q +RHS + LG R +I D++ + + G +T +F +
Sbjct: 66 LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYL 125
Query: 136 LKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR-LCCKKGDVEMGEKLLREMSLSD 194
+K+ EA+L + L KM +F P N ++ L +G ++ +L + L
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHG 185
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
P+ +Y +++ C AY L M P++ + G CR G
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
G P+ ++YT+L+ S C ++Q EA +L RM+ GC + V T+I
Sbjct: 246 ELLDDMLNKGFV-PDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
C + +A +++D ++ +G S Y +L+ L +E +K E+++ P
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 374 TLASSLLLKELC 385
S+ L+K C
Sbjct: 365 FSVSNCLVKGFC 376
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 20/276 (7%)
Query: 89 GYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVA 148
GY A+ K+S L G+ N + L++++ C L+ +A
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAF------------------CLNDDLS-IA 209
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEG 208
+ KM + PD Y ++I+ C+KG V +LL +M PD ++Y T++
Sbjct: 210 YQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNS 269
Query: 209 LCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRP 268
LC + +AY LL M++ GC+P+LV + + G CR +G C P
Sbjct: 270 LCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNG-CSP 328
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
N V+Y +LI C++ ++E L+ M + G + + L+ C G VEEA +V
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV 388
Query: 329 DKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRE 364
+ ++++G + +VI LI + E KLF E
Sbjct: 389 EVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLE 424
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 3/276 (1%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
F + L K+ LA A K +D+ S D + ++I + K+G V + +
Sbjct: 141 FLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQ 200
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
D+ +Y ++I N+GR +A ++ K M GC P L+ + I + + G+
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER-SQWNEALNVLDRMRAFGCLANHVTAFT 310
KS P+ TY +LI + C+R S EA V + M+A G + VT
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGE 369
L+D +EA ++++++V +G S Y+SL+ + R L+EA +L ++
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 370 LKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
KPD + LL +V + + M N GC
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 2/274 (0%)
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR 172
I L+E +++G + ++ CK L A V +M+ G D V YN ++
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 173 LCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSP 232
+ K + K+L EM L+ P ++TY ++I G ++A L M G P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 233 NLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNV 292
++ + + G R+G +G C+PN+ T+ + I+ + R ++ E + +
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 293 LDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIR 351
D + G + VT TL+ G E + ++ G V + +++L+ + R
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 352 IKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
E+A ++R +L + PD + +L L
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 2/272 (0%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
Q + E +A G + +L + ++ A+ VL +M G P V YN +
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
I + G ++ +L +M+ PD+ TY T++ G AG+ E A S+ ++MR GC
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
PN+ +A G G P++VT+ +L+ F + +E
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG-LSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISL 349
V M+ G + T TLI + G E+A + ++++ GV+ Y++++ +L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 350 IRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
R E++EK+ E+ G KP+ L LL
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 125/304 (41%), Gaps = 39/304 (12%)
Query: 72 KQCQLGVRFFIWAGFQSGYRH--SAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTV 129
K+ L +R F W Q Y+ + S+LG + ++ + +G + V
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208
Query: 130 NMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL---------------- 173
+ ++ + A+ V +KME+ G +P + YNV++ +
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 174 -------------------CCKKGDV-EMGEKLLREMSLSDACPDLITYITMIEGLCNAG 213
CCK+G + + ++ EM + D +TY +++ +
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
RP++A +L +M ++G SP++V +++ R G + G +P+V TY
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTY 387
Query: 274 TSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
T+L+ F + A+++ + MR GC N T I ++G E ++ D++
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 334 HGVS 337
G+S
Sbjct: 448 CGLS 451
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 8/191 (4%)
Query: 114 CDLIESYE-------AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVM 166
CDL+ E G + ++ + Q+ A VL M++ G P
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 666
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
YN ++ + + D E++LRE+ PD+I+Y T+I C R DA + +MR
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
G P+++ + K G CRPN TY S++ +C+ ++
Sbjct: 727 NSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG-CRPNQNTYNSIVDGYCKLNRK 785
Query: 287 NEALNVLDRMR 297
+EA ++ +R
Sbjct: 786 DEAKLFVEDLR 796
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 2/255 (0%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
V ++M+ G P+ +N +I + G E + R M + PDL TY T++ L
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
G E + +L +M C PN + ++ +G SG P
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
V +L+ + EA ++ G + T +++ + V +A ++D
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 331 LVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
+ E G + Y+SL+ R ++E++ RE+LA +KPD ++ + ++ C R
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 390 VLDGFYLLDAMENMG 404
+ D + M N G
Sbjct: 715 MRDASRIFSEMRNSG 729
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 3/206 (1%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P V+ ++ +C K + E+ E+ PD+ T +M+ A +
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
L M+ G +P++ +++ RS G +P++++Y ++I ++C
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG-IKPDIISYNTVIYAYC 710
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-D 340
++ +A + MR G + + +T T I S EEA +V +++HG +
Sbjct: 711 RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQN 770
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELL 366
Y+S+V ++ R +EA KLF E L
Sbjct: 771 TYNSIVDGYCKLNRKDEA-KLFVEDL 795
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 107/262 (40%), Gaps = 8/262 (3%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ V R+M D G PD YN V+ + G E EK+L EM P+ +TY +++
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
N +SL +++ P V+L + +C K
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV-LVCSKCDLLPEAERAFSELKERGFS 626
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLI---DSLCDKGCVEEA 324
P++ T S++ + R +A VLD M+ G + T +L+ D G EE
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 325 YR-LVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
R ++ K ++ + Y++++ + R R+ +A ++F E+ + PD + + +
Sbjct: 687 LREILAKGIKPDII---SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 384 LCMKDRVLDGFYLLDAMENMGC 405
+ ++ M GC
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGC 765
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 160/369 (43%), Gaps = 9/369 (2%)
Query: 39 LHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYR 98
L + ++E L ++K L +++V+ R + + RFF WA + G+ H + Y
Sbjct: 140 LFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHAR-KPAFRFFCWAAERQGFAHDSRTYN 198
Query: 99 KASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDF 158
S+L R + + ++E +G ++T+ F +K A+ A+ + M+ +
Sbjct: 199 SMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVGIFELMKKY 257
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGE--KLLREMSLSDACPDLITYITMIEGLCNAGRPE 216
+ N ++ G ++G+ ++L + P+++TY ++ G C
Sbjct: 258 KFKIGVETINCLLDSL---GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 217 DAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
+A + DM HG P++V + + +GL RS G C PNV +YT +
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC-PNVRSYTIM 373
Query: 277 IQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG- 335
I+ FC++S A+ D M G + LI + ++ Y L+ ++ E G
Sbjct: 374 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 433
Query: 336 VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFY 395
G Y++L+ + K E +++ +++ E++P ++++K + G
Sbjct: 434 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 493
Query: 396 LLDAMENMG 404
+ D M G
Sbjct: 494 VWDEMIKKG 502
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 1/189 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ + M+ G P+ Y ++IR CK+ +E + +M S PD Y +I
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G + + Y LLK+M+ G P+ +A+ L + +
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK-LMANQKMPEHGTRIYNKMIQNEIE 469
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P++ T+ +++S+ + V D M G + + LI L +G EA R
Sbjct: 470 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 529
Query: 328 VDKLVEHGV 336
++++++ G+
Sbjct: 530 LEEMLDKGM 538
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 182/429 (42%), Gaps = 8/429 (1%)
Query: 45 SVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLL 104
S+E+ L K+ + + + V V+ RC K L +RFF W + G+ H +Y S+
Sbjct: 141 SMEDRLEKLSFRFEPEIVENVLKRCF-KVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIA 199
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
G RN M+ +L+ E GC + + ++ + +A+ L V KM G D
Sbjct: 200 GEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDA 259
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
YN++IR C G ++ + +EM L TY +++ + + + + S+ D
Sbjct: 260 TAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADD 319
Query: 225 M-RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER 283
M R+ S + + C SG C + + L++ C
Sbjct: 320 MVRICEISEH-DAFGYLLKSFCVSGKIKEALELIRELKNKEMC-LDAKYFEILVKGLCRA 377
Query: 284 SQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCY 342
++ +AL ++D M+ ++V +I + V +A + + + G Y
Sbjct: 378 NRMVDALEIVDIMKRRKLDDSNVYGI-IISGYLRQNDVSKALEQFEVIKKSGRPPRVSTY 436
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
+ ++ L ++K+ E+ LF E++ ++PD++A + ++ ++RV + + + +ME
Sbjct: 437 TEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEE 496
Query: 403 MGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKSEEK 462
G LC+ + E K+ M +++R I + K+ EK
Sbjct: 497 KGIKPTWKSYSIFVKE--LCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEK 554
Query: 463 DLVDLVNQL 471
+ + L+ ++
Sbjct: 555 EKIHLIKEI 563
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 147/367 (40%), Gaps = 39/367 (10%)
Query: 46 VENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLG 105
+ +L K + + V++V+ R Q +RFF W G ++GY+H++ Y + + G
Sbjct: 631 TQEALEKSTVQFTPELVVEVL-RHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAG 689
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTV 165
++ + + L +GC++T + + ++ L ++A+ ++M+D G P +
Sbjct: 690 CGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSS 749
Query: 166 MYNVVIR-LCCKKG-DVEMGEKLLREMSLSDACPD------------------------- 198
+ +I LC KKG +VE + REM S PD
Sbjct: 750 TFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLD 809
Query: 199 ---------LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGS 249
+ Y I LC G+ E+A S L + +I GL + G
Sbjct: 810 SLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGD 869
Query: 250 XXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAF 309
+ G +P V YTSLI F + Q + L +M C + VT
Sbjct: 870 LQKALDKVNSMKEIG-TKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYT 928
Query: 310 TLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAG 368
+I G VEEA+ + E G S YS + L + + E+A KL E+L
Sbjct: 929 AMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDK 988
Query: 369 ELKPDTL 375
+ P T+
Sbjct: 989 GIAPSTI 995
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 111 QMICDLIESYEAEGCVVTVNMFRE-VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
Q D + S + G V+++ ++ KE QL V L +KME P V Y
Sbjct: 871 QKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV-LETCQKMEGESCEPSVVTYTA 929
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG 229
+I G VE R M PD TY I LC A + EDA LL +M G
Sbjct: 930 MICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKG 989
Query: 230 CSPNLVVLSAIFDGLCRSG 248
+P+ + +F GL R G
Sbjct: 990 IAPSTINFRTVFYGLNREG 1008
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 4/293 (1%)
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
++ + F RP+ +Y+ + C GD+ + +E+ PD + Y TMI+G CN
Sbjct: 361 IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVV 271
GR + A+ + G P+L S I G C K+ + +VV
Sbjct: 421 LGRTDKAFQYFGALLKSGNPPSLTT-STILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
TY +L+ + + Q N+ ++D MR+ G + T LI S+ +G ++EA ++ +L
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 332 VEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
+ G V ++ ++ + +EA L+ + +KPD + S LL C R+
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 391 LDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
L + + + G G C + +A +L +M+++ +L
Sbjct: 600 EKAIVLFNKLLDAG--LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 127 VTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKL 186
V +++ +E+L++ ++A + M G + + ++ IR C G + G +L
Sbjct: 238 VCISLLKEILRV----HGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWEL 293
Query: 187 LREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR 246
L M PD++ + I+ LC AG ++A S+L +++ G S + V +S++ DG C+
Sbjct: 294 LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK 353
Query: 247 SGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHV 306
G S RPN+ Y+S + + C A + + G L + V
Sbjct: 354 VGK----PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 307 TAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVI-SLIRIKRLEEAEKLFREL 365
T+ID C+ G ++A++ L++ G S+++I + R + +AE +FR +
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 366 LAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
LK D + + L+ ++ F L+D M + G
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
V R M+ G + D V YN ++ K + +L+ EM + PD+ TY +I +
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR--P 268
G ++A ++ ++ G P+ + + + G + G D R P
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM---ADLRMKP 581
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
+VVT ++L+ +C+ + +A+ + +++ G + V TLI C G +E+A L+
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 329 DKLVEHGV 336
+V+ G+
Sbjct: 642 GLMVQRGM 649
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 121 EAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
+ EG + V + ++ + + ++ +M G PD YN++I +G +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL---LKDMRVHGCSPNLVVL 237
+ +++ E+ P + + +I G G ++A+ L + D+R+ P++V
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM---KPDVVTC 586
Query: 238 SAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMR 297
SA+ G C++ +G +P+VV Y +LI +C +A ++ M
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAG-LKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 298 AFGCLANHVTAFTLI 312
G L N T L+
Sbjct: 646 QRGMLPNESTHHALV 660
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 4/293 (1%)
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
++ + F RP+ +Y+ + C GD+ + +E+ PD + Y TMI+G CN
Sbjct: 361 IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVV 271
GR + A+ + G P+L S I G C K+ + +VV
Sbjct: 421 LGRTDKAFQYFGALLKSGNPPSLTT-STILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
TY +L+ + + Q N+ ++D MR+ G + T LI S+ +G ++EA ++ +L
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 332 VEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
+ G V ++ ++ + +EA L+ + +KPD + S LL C R+
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 391 LDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
L + + + G G C + +A +L +M+++ +L
Sbjct: 600 EKAIVLFNKLLDAG--LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 127 VTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKL 186
V +++ +E+L++ ++A + M G + + ++ IR C G + G +L
Sbjct: 238 VCISLLKEILRV----HGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWEL 293
Query: 187 LREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR 246
L M PD++ + I+ LC AG ++A S+L +++ G S + V +S++ DG C+
Sbjct: 294 LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK 353
Query: 247 SGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHV 306
G S RPN+ Y+S + + C A + + G L + V
Sbjct: 354 VGK----PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 307 TAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVI-SLIRIKRLEEAEKLFREL 365
T+ID C+ G ++A++ L++ G S+++I + R + +AE +FR +
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 366 LAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
LK D + + L+ ++ F L+D M + G
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
V R M+ G + D V YN ++ K + +L+ EM + PD+ TY +I +
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR--P 268
G ++A ++ ++ G P+ + + + G + G D R P
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM---ADLRMKP 581
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
+VVT ++L+ +C+ + +A+ + +++ G + V TLI C G +E+A L+
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 329 DKLVEHGV 336
+V+ G+
Sbjct: 642 GLMVQRGM 649
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 121 EAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
+ EG + V + ++ + + ++ +M G PD YN++I +G +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL---LKDMRVHGCSPNLVVL 237
+ +++ E+ P + + +I G G ++A+ L + D+R+ P++V
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM---KPDVVTC 586
Query: 238 SAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMR 297
SA+ G C++ +G +P+VV Y +LI +C +A ++ M
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAG-LKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 298 AFGCLANHVTAFTLI 312
G L N T L+
Sbjct: 646 QRGMLPNESTHHALV 660
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 6/213 (2%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCC--KKGDVEMGEKLLREMSLSDACPDLITYITM 205
A++++ K+ + G +PD +YN +++ C KG +G + ++M PD ITY T+
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG--VYKKMKEEGVEPDQITYNTL 306
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I GL AGR E+A LK M G P+ +++ +G+CR G G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG- 365
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
C PN TY +L+ C+ ++ + + + M++ G TL+ SL G V EAY
Sbjct: 366 CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAY 425
Query: 326 RLVDKLVE-HGVSYGDCYSSLVISLIRIKRLEE 357
+ D V+ +S YS+L +L +K+ +E
Sbjct: 426 EVFDYAVDSKSLSDASAYSTLETTLKWLKKAKE 458
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 2/226 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK L V +V +DF +PD V + ++I C ++ L+ ++ + P
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D Y T+++G C + +A + K M+ G P+ + + + GL ++G
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+G P+ TYTSL+ C + + AL++L+ M A GC N T TL+ LC
Sbjct: 324 KTMVDAG-YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Query: 318 KGCVEEAYRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLF 362
+++ L + + GV + Y++LV SL++ ++ EA ++F
Sbjct: 383 ARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 5/257 (1%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
VL M + G PD V ++ +R C+ G V+ + L++E++ + PD TY +++ LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 211 NAGRPEDAYSLLKDMRVH-GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPN 269
Y + +MR P+LV + + D +C S + +G +P+
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG-FKPD 264
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD 329
Y ++++ FC S+ +EA+ V +M+ G + +T TLI L G VEEA +
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 330 KLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKD 388
+V+ G Y+SL+ + R A L E+ A P+ + LL LC K
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC-KA 383
Query: 389 RVLD-GFYLLDAMENMG 404
R++D G L + M++ G
Sbjct: 384 RLMDKGMELYEMMKSSG 400
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 151/321 (47%), Gaps = 14/321 (4%)
Query: 81 FIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLI-ESYEAEGCVVTVNMFREVLKLC 139
F WA G+ HS YR L + R + L+ E ++ G +F +++
Sbjct: 63 FRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGF 122
Query: 140 KEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL-REMSLSDACPD 198
A+L + V+ + FG +P ++N ++ + K+ D+++ + R+M S D
Sbjct: 123 GRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDIAREFFTRKMMASGIHGD 181
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
+ TY +++GL R D + LL+ M+ G +PN VV + + LC++G
Sbjct: 182 VYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMS 241
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
+ PN VT+ LI ++C + +++ +L++ + G + + VT +++ LC++
Sbjct: 242 EMKE-----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE 296
Query: 319 GCVEEAYRLVDKLVEHG--VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G V EA +++++ G V C ++LV + ++ A++ F E+ P+
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVAC-NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVET 355
Query: 377 SSLLLKELC---MKDRVLDGF 394
+LL+ C M D LD F
Sbjct: 356 YNLLIAGYCDVGMLDSALDTF 376
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 143/333 (42%), Gaps = 19/333 (5%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
VVTV EVL C E ++++ AL VL ++E G + D V N +++ C G + + ++
Sbjct: 283 VVTVTKVMEVL--CNEGRVSE-ALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQR 339
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
EM P++ TY +I G C+ G + A DM+ N + + GL
Sbjct: 340 FFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLS 399
Query: 246 RSGSXXXXXXXXXXXXKSGDCR-PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLAN 304
G S + Y +I F + ++W +AL L +M A
Sbjct: 400 IGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAV 459
Query: 305 HVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKR------LEEA 358
+F LI SLC+KG +++ D+++ G S+++S I R +EE+
Sbjct: 460 D-RSFKLI-SLCEKGGMDDLKTAYDQMIGEG-----GVPSIIVSHCLIHRYSQHGKIEES 512
Query: 359 EKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXX 418
+L +++ P + + ++ C +D+V++G ++ M GC
Sbjct: 513 LELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEE 572
Query: 419 XGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDS 451
LC K + +A L M++KS++ P S
Sbjct: 573 --LCVKGDIQKAWLLFSRMVEKSIVPDPSMWSS 603
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 5/221 (2%)
Query: 185 KLLREMSLSDACP-DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
+LL EM S P D ++T+I G A + S++ + G P+L V ++I D
Sbjct: 97 QLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDV 156
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
L + SG +V TY L++ ++ + +L M+ G
Sbjct: 157 LVKEDIDIAREFFTRKMMASG-IHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAP 215
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFR 363
N V TL+ +LC G V A L+ ++ E ++ L+ + ++L ++ L
Sbjct: 216 NAVVYNTLLHALCKNGKVGRARSLMSEMKEPN---DVTFNILISAYCNEQKLIQSMVLLE 272
Query: 364 ELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ + PD + + +++ LC + RV + +L+ +E+ G
Sbjct: 273 KCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 155/351 (44%), Gaps = 9/351 (2%)
Query: 39 LHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYR 98
L + ++E L ++K L +++V+ R + + RFF WA + G+ H + Y
Sbjct: 141 LFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHAR-KPAFRFFCWAAERQGFAHDSRTYN 199
Query: 99 KASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDF 158
S+L R + + ++E +G ++T+ F +K A+ A+ + M+ +
Sbjct: 200 SMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVGIFELMKKY 258
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGE--KLLREMSLSDACPDLITYITMIEGLCNAGRPE 216
+ N ++ G ++G+ ++L + P+++TY ++ G C
Sbjct: 259 KFKIGVETINCLLDSL---GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 217 DAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
+A + DM G P++V + + +GL RS G C PNV +YT +
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC-PNVRSYTIM 374
Query: 277 IQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG- 335
I+ FC++S A+ D M G + LI + ++ Y L+ ++ E G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 336 VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
G Y++L+ + K E A +++ +++ E++P ++++K M
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 79/189 (41%), Gaps = 1/189 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ + M+ G P+ Y ++IR CK+ +E + +M S PD Y +I
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G + + Y LLK+M+ G P+ +A+ L + +
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK-LMANQKMPEHATRIYNKMIQNEIE 470
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P++ T+ +++S+ + V + M G + + LI L +G EA R
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRY 530
Query: 328 VDKLVEHGV 336
++++++ G+
Sbjct: 531 LEEMLDKGM 539
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%)
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
T+T +++F + +A+ + + M+ + T L+DSL +EA L DKL
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 332 VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVL 391
E Y+ L+ R++ L EA +++ +++ LKPD +A +++L+ L +
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKS 350
Query: 392 DGFYLLDAMENMG 404
D L M++ G
Sbjct: 351 DAIKLFHVMKSKG 363
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 4/314 (1%)
Query: 89 GYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKL-CKEAQLADV 147
G + AY Y + R+ + +++ + +G V + +++L K +++D
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD- 312
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A + +M + G D +Y +I C+KG+++ L E++ P TY +I+
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G+C G A L+ +M+ G + VV + + DG CR G + G +
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG-FQ 431
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
+V T ++ F +++EA L RM G + V+ LID C +G VEEA RL
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 328 VDKLVEHGVS-YGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
++ GV Y+ ++ + + +++EA KL + A + PD+ + L+ C+
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 387 KDRVLDGFYLLDAM 400
D V + L M
Sbjct: 552 ADNVDEAMRLFSEM 565
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 154/398 (38%), Gaps = 97/398 (24%)
Query: 79 RFFIWAG-FQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK 137
R ++ G F+ G R YM +K S+ + C+V L
Sbjct: 162 RVYVDNGMFEEGLRVFDYMVKKGLSI-----------------DERSCIV-------FLV 197
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
K+ + D+ L + R+M D G + +V+ C++G+VE +KL++E S+ P
Sbjct: 198 AAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKP 257
Query: 198 DLITYITMI------------EGLCNA-----------------------GRPEDAYSLL 222
+ TY T+I EG+ G+ DA L
Sbjct: 258 EAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLF 317
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+MR G ++ V +++ CR G+ + G P+ TY +LI C+
Sbjct: 318 DEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG-LSPSSYTYGALIDGVCK 376
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD------------- 329
+ A +++ M++ G V TLID C KG V+EA + D
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 330 ----------------------KLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELL 366
+++E GV Y++L+ + +EEA++LF E+
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ ++P+ + ++++ C + ++ + L ME G
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 100/246 (40%), Gaps = 40/246 (16%)
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
G+ MI D++E + V T N K + + W+ R ME G + T
Sbjct: 413 GMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLK--RYDEAKQWLFRMMEG-GVKLST 469
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
V Y +I + CK+G+VE ++L EMS P+ ITY MI C G+ ++A L +
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M +G P + TYTSLI C
Sbjct: 530 MEANGMDP------------------------------------DSYTYTSLIHGECIAD 553
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYS 343
+EA+ + M G N VT +I L G +EA+ L D++ G + + Y+
Sbjct: 554 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYT 613
Query: 344 SLVISL 349
+L+ S+
Sbjct: 614 ALIGSM 619
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 3/229 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
+CK ++ A ++ +M+ G V++N +I C+KG V+ + M
Sbjct: 374 VCKVGEMG-AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D+ T T+ R ++A L M G + V + + D C+ G+
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
G +PN +TY +I ++C++ + EA + M A G + T +LI C
Sbjct: 493 VEMSSKG-VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFREL 365
V+EA RL ++ G+ Y+ ++ L + + +EA L+ E+
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLS----------------- 193
+L + G +P+T ++N++++ CK GD+ ++ EM S
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 194 --------------------DACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
PD +T+ MI G C AG E A +L M+ +GC+PN
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
+ SA+ +G C+ G K+G + + V YT+L+ FC + +EA+ +L
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTG-LKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRI 352
M+A C A+ +T ++ L +G EEA +++D+ GV Y ++ +L
Sbjct: 362 GEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELC------MKDRVLDGF 394
LE+A K + + P + L+ LC + RVL GF
Sbjct: 422 GELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGF 469
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 116/243 (47%), Gaps = 2/243 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G PD V +NV+I C+ G+VE +K+L M + P++ Y ++ G C G+ ++A
Sbjct: 263 GISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
+++ G + V + + + CR+G K+ CR + +TY +++
Sbjct: 323 KQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE-TDEAMKLLGEMKASRCRADTLTYNVILR 381
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV-S 337
+ EAL +LD+ + G N + ++++LC G +E+A + + + E G+
Sbjct: 382 GLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
Query: 338 YGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
+ ++ LV+ L E ++ L L P + +++ +C + +++ F LL
Sbjct: 442 HHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Query: 398 DAM 400
D++
Sbjct: 502 DSL 504
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 229 GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNE 288
G PN + + + C++G +SG PN +TY++L+ S+ E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 289 ALNVL-DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS---YGDCYSS 344
A+ + D + G + VT +I+ C G VE A +++D + ++G + Y YS+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYN--YSA 308
Query: 345 LVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L+ ++ +++EA++ F E+ LK DT+ + L+ C + LL M+
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 405 C 405
C
Sbjct: 369 C 369
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 2/218 (0%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L M+ G P+ Y+ ++ CK G ++ ++ E+ + D + Y T++ C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
G ++A LL +M+ C + + + I GL G G N
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEG-VHLNK 408
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
+Y ++ + C + +A+ L M G +H T L+ LC+ G E R++
Sbjct: 409 GSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIG 468
Query: 331 LVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLA 367
+ G+ G + ++V S+ + ++L +L L++
Sbjct: 469 FLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 25/264 (9%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A +L++M P+ N+++ K G + E+LLR+M+ D +T +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHG-----------------------CSPNLVVLSAIFD 242
++GLC +G + A ++K MRVHG C P+L+ S + +
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 243 GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
GLC++G +P+ V Y I FC++ + + A VL M GC
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCH 591
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKL 361
+ T +LI L K + E + L+D++ E G+S C Y++ + L +++E+A L
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNL 651
Query: 362 FRELLAGELKPDTLASSLLLKELC 385
E++ + P+ + L++ C
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIEAFC 675
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 139/328 (42%), Gaps = 8/328 (2%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+L + +GC F +++ +A L D L +L ME FG P+ V+YN ++
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC---- 230
C++G + EK++ +M PD++T+ + I LC G+ DA + DM +
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
PN + + + G C+ G + D ++ +Y +Q ++ EA
Sbjct: 288 RPNSITYNLMLKGFCKVG-LLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV-SYGDCYSSLVISL 349
VL +M G + + L+D LC G + +A +V + +GV Y L+
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 350 IRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXX 409
+ +++ A+ L +E++ P+ ++LL L R+ + LL M G
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG--YGL 464
Query: 410 XXXXXXXXXXGLCQKNHLAEATKLAKIM 437
GLC L +A ++ K M
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 122/282 (43%), Gaps = 6/282 (2%)
Query: 128 TVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
+V ++ +L+ C + + + W+ + M G P T +N++IR C V+ +L
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
EM P+ T+ ++ G C AG + LL M G PN V+ + I CR
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA---- 303
G + G P++VT+ S I + C+ + +A + M L
Sbjct: 231 GRNDDSEKMVEKMREEG-LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEH-GVSYGDCYSSLVISLIRIKRLEEAEKLF 362
N +T ++ C G +E+A L + + E+ ++ Y+ + L+R + EAE +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 363 RELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+++ + P + ++L+ LC + D ++ M+ G
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 8/288 (2%)
Query: 160 SRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAY 219
++P +YN+++ C K+ VE L ++M L P T+ +I LC++ + A
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAR 167
Query: 220 SLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQS 279
L +M GC PN + G C++G G PN V Y +++ S
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG-VLPNKVIYNTIVSS 226
Query: 280 FCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL-----VDKLVEH 334
FC + +++ ++++MR G + + VT + I +LC +G V +A R+ +D+ +
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 335 GVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGF 394
Y+ ++ ++ LE+A+ LF + + + ++ L+ L + ++
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 395 YLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
+L M + G GLC+ L++A + +M + V
Sbjct: 347 TVLKQMTDKGI--GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 1/229 (0%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
PD + Y+ ++ CK G + L EM PD + Y I C G+ A+ +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
LKDM GC +L +++ GL + G PN+ TY + IQ C
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG-ISPNICTYNTAIQYLC 640
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC 341
E + +A N+LD M N + LI++ C + A + + V
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL 700
Query: 342 YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
YS + L+ +L +A +L +L + T L++ LC KD +
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDEL 749
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK + A+ A + +M +PD+V YN+ I CK+G + ++L++M
Sbjct: 534 LCKAGRFAE-AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
L TY ++I GL + + + L+ +M+ G SPN+ + LC G
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE-GEKVEDATNL 651
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ PNV ++ LI++FC+ ++ A V + + C + + L
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLA 710
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELL 366
G + +A L++ +++ G G Y LV SL + LE A + +++
Sbjct: 711 AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMI 760
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 4/219 (1%)
Query: 116 LIESYEAEGCVVTVNMFRE-VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+++ E +GC ++ + +L L + Q+ ++ ++ +M++ G P+ YN I+
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH-GLMDEMKEKGISPNICTYNTAIQYL 639
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
C+ VE LL EM + P++ ++ +IE C + A + + V C
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKE 698
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+ S +F+ L +G G Y L++S C++ + A +L
Sbjct: 699 GLYSLMFNELLAAGQLLKATELLEAVLDRG-FELGTFLYKDLVESLCKKDELEVASGILH 757
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
+M G + +ID L G +EA DK++E
Sbjct: 758 KMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 5/257 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC + +L D ALW+ +KM G P + +N ++ CK G +E + L+REM P
Sbjct: 131 LCLQGKL-DAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSP 189
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS---GSXXXXX 254
+ ++Y T+I+GLC+ + A L M +G PN V + I LC+ G+
Sbjct: 190 NCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKL 249
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
+ ++V T L+ S + +AL V M A+ V +I
Sbjct: 250 LEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRG 309
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
LC G + AY + +V+ GV+ Y++L+ +L + + +EA L + G + PD
Sbjct: 310 LCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPD 369
Query: 374 TLASSLLLKELCMKDRV 390
++ ++++ LC+ V
Sbjct: 370 QISYKVIIQGLCIHGDV 386
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 134/329 (40%), Gaps = 43/329 (13%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV-EMGEKLLREM---SLSDACPDLI 200
D AL++ M +G RP+ V N+++ C+KG + +KLL E+ S ++A D++
Sbjct: 207 VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIV 266
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXX 260
+++ G A + K+M + VV + I GLC SG+
Sbjct: 267 ICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 261 XKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGC 320
K G P+V TY +LI + C+ +++EA ++ M+ G + ++ +I LC G
Sbjct: 327 VKRG-VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 321 VEEAYR---------------LVDKLVEHGVSYGDCYSSLVI------------------ 347
V A L + +++ YGD S+L +
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 348 ---SLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++ RL +A + E+ + ++ PDT +LLL C + F L D M G
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 405 CXXXXXXXXXXXXXXGLCQKNHLAEATKL 433
C GLC K L +A L
Sbjct: 506 C--QPDIITYTELVRGLCWKGRLKKAESL 532
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 2/258 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL V ++M D+V+YNV+IR C G++ + +M PD+ TY T+I
Sbjct: 284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 343
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
LC G+ ++A L M+ G +P+ + I GLC G KS
Sbjct: 344 ALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSL-L 402
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P V+ + +I + + AL+VL+ M ++G N T LI G + +A+ +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 328 VDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+++ + Y+ L+ + + L A +L+ E+L +PD + + L++ LC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 387 KDRVLDGFYLLDAMENMG 404
K R+ LL ++ G
Sbjct: 523 KGRLKKAESLLSRIQATG 540
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 8/258 (3%)
Query: 112 MICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVI 171
+CD+++ V T N + LCKE + D A + M++ G PD + Y V+I
Sbjct: 322 FMCDMVKR-GVNPDVFTYNTL--ISALCKEGKF-DEACDLHGTMQNGGVAPDQISYKVII 377
Query: 172 RLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCS 231
+ C GDV + L M S P+++ + +I+G G A S+L M +G
Sbjct: 378 QGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVK 437
Query: 232 PNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALN 291
PN+ +A+ G + G +S P+ TY L+ + C A
Sbjct: 438 PNVYTNNALIHGYVKGGRLIDAWWVKNEM-RSTKIHPDTTTYNLLLGAACTLGHLRLAFQ 496
Query: 292 VLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVIS--L 349
+ D M GC + +T L+ LC KG +++A L+ ++ G++ D L+++
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI-DHVPFLILAKKY 555
Query: 350 IRIKRLEEAEKLFRELLA 367
R++R EA ++++ LA
Sbjct: 556 TRLQRPGEAYLVYKKWLA 573
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 16/280 (5%)
Query: 127 VTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKL 186
V +N F ++ + K + + D +M + G P+ ++YN+++ C+ G++E ++L
Sbjct: 632 VLINGFSKLGNMQKASSIFD-------EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 187 LREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR 246
L EMS+ P+ +TY T+I+G C +G +A+ L +M++ G P+ V + + DG CR
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 247 SGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMR-----AFGC 301
K C + + +LI + + VL+R+ FG
Sbjct: 745 LNDVERAITIFGTNKKG--CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG- 801
Query: 302 LANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV-SYGDCYSSLVISLIRIKRLEEAEK 360
N VT +ID LC +G +E A L ++ + Y+SL+ ++ R E
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 361 LFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
+F E +A ++PD + S+++ + L+D M
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 39/260 (15%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G P Y +I C++ +V G +LL EM + TY T+++G+C++G + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFD-----------------------------------G 243
Y+++K+M GC PN+V+ + + G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
L ++ ++G +PN TY + I + E S++ A + MR G L
Sbjct: 497 LSKAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC--YSSLVISLIRIKRLEEAEKL 361
N V LI+ C KG V EA +V+ G+ GD Y+ L+ L + ++++AE++
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI-LGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 362 FRELLAGELKPDTLASSLLL 381
FRE+ + PD + +L+
Sbjct: 615 FREMRGKGIAPDVFSYGVLI 634
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 6/329 (1%)
Query: 107 DRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTV 165
++N + +L+ + V++ + V+K +C L D A ++++M G RP+ V
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL-DGAYNIVKEMIASGCRPNVV 453
Query: 166 MYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDM 225
+Y +I+ + ++L+EM PD+ Y ++I GL A R ++A S L +M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 226 RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQ 285
+G PN A G + + G PN V T LI +C++ +
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG-VLPNKVLCTGLINEYCKKGK 572
Query: 286 WNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSS 344
EA + M G L + T L++ L V++A + ++ G++ Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 345 LVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L+ ++ +++A +F E++ L P+ + ++LL C + LLD M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 405 CXXXXXXXXXXXXXXGLCQKNHLAEATKL 433
G C+ LAEA +L
Sbjct: 693 L--HPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 138/345 (40%), Gaps = 30/345 (8%)
Query: 81 FIWAGFQSGYRH-----SAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTV-NMFRE 134
F + F SGY SA Y K G+ N + LI Y +G V+ + +R
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 135 VLK----------------LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKG 178
++ L K ++ D A + R+M G PD Y V+I K G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDD-AEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 179 DVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLS 238
+++ + EM P++I Y ++ G C +G E A LL +M V G PN V
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 239 AIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRA 298
I DG C+SG G P+ YT+L+ C + A+ + +
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Query: 299 FGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE-----HGVSYGDCYSSLVISLIRIK 353
GC ++ LI+ + G E ++++L++ G Y+ ++ L +
Sbjct: 761 -GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLD 398
LE A++LF ++ L P + + LL R + F + D
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 130/325 (40%), Gaps = 51/325 (15%)
Query: 109 NPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMY 167
N Q + + EG V ++ +L C+ ++ + A +L +M G P+ V Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI-EKAKELLDEMSVKGLHPNAVTY 700
Query: 168 NVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRV 227
+I CK GD+ +L EM L PD Y T+++G C E A ++ +
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK- 759
Query: 228 HGCS---------------------------------------PNLVVLSAIFDGLCRSG 248
GC+ PN V + + D LC+ G
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 249 SXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTA 308
+ ++ + P V+TYTSL+ + + + E V D A G +H+
Sbjct: 820 NLEAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 309 FTLIDSLCDKGCVEEAYRLVDKL-----VEHG--VSYGDCYSSLVISLIRIKRLEEAEKL 361
+I++ +G +A LVD++ V+ G +S C +L+ ++ +E AEK+
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC-RALLSGFAKVGEMEVAEKV 937
Query: 362 FRELLAGELKPDTLASSLLLKELCM 386
++ + PD+ L+ E C+
Sbjct: 938 MENMVRLQYIPDSATVIELINESCI 962
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 106/255 (41%), Gaps = 39/255 (15%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G P Y+V+I CK +E + LL EM D TY +I+GL + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 219 YSLLKDMRVHGCSPN-------LVVLS---------AIFDGLCRSGSXXXXXXXXXXXXK 262
L+ +M HG + + V+S A+FDG+ SG
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI-- 389
Query: 263 SGDCRP----------------NVV----TYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
G CR N+V TY ++++ C + A N++ M A GC
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKL 361
N V TLI + +A R++ ++ E G++ CY+SL+I L + KR++EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 362 FRELLAGELKPDTLA 376
E++ LKP+
Sbjct: 510 LVEMVENGLKPNAFT 524
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 183/448 (40%), Gaps = 51/448 (11%)
Query: 72 KQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNM 131
KQ ++ + F+ +S +R S +MY KA + +L + + +V +
Sbjct: 158 KQFRVTINVFLNI-LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFI 216
Query: 132 FREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM 190
+ ++ LCK ++ D A + +M P + YN +I CK G+ E K+ M
Sbjct: 217 YNVLIDGLCKGKRMND-AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 191 SLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG------- 243
P LIT+ T+++GL AG EDA ++LK+M+ G P+ S +FDG
Sbjct: 276 KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Query: 244 ----------------------------LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTS 275
LC+ G G PN V Y +
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIYNT 394
Query: 276 LIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
+I +C + A ++ M G +H+ LI C+ G +E A + V+K+ G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 336 VSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGF 394
VS + Y+ L+ R ++ + +E+ P+ ++ L+ LC ++L+
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 395 YLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAID 454
+ ME+ G G C K + +A + +K MLKK + L ++ ID
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLID--GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 455 IL----RKSEEKDLVDLVNQLTGIRKGL 478
L + SE +DL+ L RKGL
Sbjct: 573 GLSMTGKLSEAEDLL-----LEISRKGL 595
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 35/287 (12%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L++MED G+ P+ V Y +I CK + + + R+M P + Y +I+G C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
+ G+ EDA+ K+M G NLV + + DGL +G + G +P+V
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG-LKPDV 599
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV-- 328
TY SLI + + + + M+ G + + + L+ SLC K +E RL
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSG-IKPTLKTYHLLISLCTKEGIELTERLFGE 658
Query: 329 -----DKLVEHGV-----SYGD---------------------CYSSLVISLIRIKRLEE 357
D LV +GV +GD Y+SL++ +++ +L E
Sbjct: 659 MSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 718
Query: 358 AEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L E+ A E++P+ ++++K C + + M+ G
Sbjct: 719 VRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 112/253 (44%), Gaps = 4/253 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
C++ L + + ME G +PD + YN +IR C+ G++E EK + +M L P
Sbjct: 400 CRKGDLVGARMKI-EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
+ TY +I G + + +LK+M +G PN+V + + LC+ GS
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK-GSKLLEAQIVK 517
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
+ P V Y LI C + + +A M G N VT TLID L
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 319 GCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
G + EA L+ ++ G+ Y+SL+ ++ L+ E+ +KP TL +
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP-TLKT 636
Query: 378 SLLLKELCMKDRV 390
LL LC K+ +
Sbjct: 637 YHLLISLCTKEGI 649
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 161/394 (40%), Gaps = 25/394 (6%)
Query: 11 PCLHKLKTLPFSSQKMGMASLADTLYSHLHQCNGSVENSLSKIKPKLDSQCV---IQVVS 67
P + L + K+ +L+ HL + + L +D C + +
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEML--GISHDLYSFTTLIDCFCRCARLSLAL 134
Query: 68 RCCPKQCQLGVR--FFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGC 125
C K +LG + +G+ H Y S + D I E
Sbjct: 135 SCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS-----------LVDQIVGLGYEPN 183
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
VV N + LC++ Q+ + AL VL+ M+ G RPD V YN +I G + +
Sbjct: 184 VVIYNTIID--SLCEKGQV-NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 186 LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
+L +M PD+IT+ +I+ G+ +A +M +PN+V +++ +GLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
G G PN VTY +LI +C+ + ++ + +L M G +
Sbjct: 301 IHGLLDEAKKVLNVLVSKG-FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSS--LVISLIRIKRLEEAEKLFR 363
T TL C G A +++ ++V GV + D Y+ L+ L ++ +A
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV-HPDMYTFNILLDGLCDHGKIGKALVRLE 418
Query: 364 ELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
+L + + ++++K LC D+V D +YL
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 2/256 (0%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+RE L+ + + AL + M + P V ++ ++ K E L R +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
+ DL ++ T+I+ C R A S L M G P++V ++ +G C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
G PNVV Y ++I S CE+ Q N AL+VL M+ G + VT +L
Sbjct: 167 EAMSLVDQIVGLG-YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
I L G + R++ ++ G+S +S+L+ + +L EA+K + E++ +
Sbjct: 226 ITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Query: 371 KPDTLASSLLLKELCM 386
P+ + + L+ LC+
Sbjct: 286 NPNIVTYNSLINGLCI 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Query: 144 LADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYI 203
L D A VL + G P+ V YN +I CK V+ G K+L MS D TY
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363
Query: 204 TMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKS 263
T+ +G C AG+ A +L M G P++ + + DGLC G KS
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423
Query: 264 GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEE 323
++TY +I+ C+ + +A + + G + +T T++ L K E
Sbjct: 424 KTV-VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWRE 482
Query: 324 AYRLVDKL 331
A+ L K+
Sbjct: 483 AHELYRKM 490
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 163/410 (39%), Gaps = 22/410 (5%)
Query: 3 HFLNFRFSPCLHKLKTLPFSSQKMGMASLADTLYSHLHQCNGSVENSLSKIKPK---LDS 59
H L +P L ++ +P K+ S+ TL + + N L P L
Sbjct: 16 HHLPAPITPPLPEIYRIPNPPPKLPEISIPPTLTLSPSPKHSNFVNFLENNLPHHQTLTP 75
Query: 60 QCVIQVVS---RCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDL 116
Q ++ + R P F WA +RH + S L + L
Sbjct: 76 QTLLGFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRL 135
Query: 117 IESYEAEGCVVTVNMF---------REVLKLCKEAQLADVALWVLRKMEDF-GSRPDTVM 166
+ A C + +F R + A+ D AL M+ +P+ +
Sbjct: 136 LSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGV 195
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
YN V+ K GD++ + + M A PD+ T+ +I G C + + + A L ++M+
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
GC PN+V + + G SG + G CR + T L+ C +
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG-CRFSEATCEILVDGLCREGRV 314
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY---S 343
++A ++ + L + +L++ LC + A ++++L + G + C+ +
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQT--PCFIACT 372
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDG 393
+LV L + R E+A +++ + PD++ +LLL++LC D D
Sbjct: 373 TLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA 422
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 17/254 (6%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM-----SLS 193
C+ ++ D+AL + R+M++ G P+ V +N +IR G +E G K+ EM S
Sbjct: 239 CRSSKF-DLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFS 297
Query: 194 DACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXX 253
+A ++ +++GLC GR +DA L+ D+ P+ ++ + LC
Sbjct: 298 EATCEI-----LVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRA 352
Query: 254 XXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLID 313
K G P + T+L++ + + +A +++M G L + VT L+
Sbjct: 353 MEMMEELWKKGQT-PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 314 SLCDKGCVEEAYRLVDKLVEHGVSYGD---CYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
LC +A RL +L+ Y Y LV + R +E E L E+L ++
Sbjct: 412 DLCSSDHSTDANRL--RLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDM 469
Query: 371 KPDTLASSLLLKEL 384
PD + L+ L
Sbjct: 470 LPDIFTYNRLMDGL 483
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 145/328 (44%), Gaps = 14/328 (4%)
Query: 123 EGCVVTVNMFREVLKL-CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
+G + V +F + + K LA ++ V ++M G P+ V Y ++I+ C+ G +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASV-VYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
+ ++ P ++TY ++I+G C G ++L +DM G P++V+ +
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
DGL + G R NVV + SLI +C ++++EAL V M +G
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQ-SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG- 526
Query: 302 LANHVTAFTLI-------DSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLI-RIK 353
+ V FT + D+ C +L D + + +S ++VI L+ +
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXX 413
R+E+A K F L+ G+++PD + + ++ C R+ + + + ++
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 414 XXXXXXGLCQKNHLAEATKLAKIMLKKS 441
LC+ N + A ++ IM +K
Sbjct: 647 ILIHV--LCKNNDMDGAIRMFSIMAEKG 672
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 171/424 (40%), Gaps = 27/424 (6%)
Query: 27 GMASLADTLYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLG-----VRFF 81
GM +AD ++ + G N L I+ + V + + CC C+ G + F
Sbjct: 113 GMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECC---CRYGMVDKALEIF 169
Query: 82 IWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCV-------VTVNMFRE 134
+++ +YR +SL+G DR DLI + + C V+ + F
Sbjct: 170 VYSTQLGVVIPQDSVYRMLNSLIGSDR-----VDLIADHFDKLCRGGIEPSGVSAHGFVL 224
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
CK AL R + + G R V N V++ +E+ +LL +
Sbjct: 225 DALFCKGE--VTKALDFHRLVMERGFRVGIVSCNKVLK-GLSVDQIEVASRLLSLVLDCG 281
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
P+++T+ T+I G C G + A+ L K M G P+L+ S + DG ++G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
G + +VV ++S I + + A V RM G N VT LI
Sbjct: 342 KLFSQALHKG-VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
LC G + EA+ + ++++ G+ YSSL+ + L L+ +++ PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 374 TLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKL 433
+ +L+ L + +L +++ +G G C+ N EA K+
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRF--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 434 AKIM 437
++M
Sbjct: 519 FRLM 522
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 10/218 (4%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
D + NVVI L K +E K + PD++TY TMI G C+ R ++A +
Sbjct: 571 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 630
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+ ++V PN V L+ + LC++ + G +PN VTY L+ F +
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSK 689
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA----YRLVD-KLVEHGVS 337
+ + + M+ G + V+ +ID LC +G V+EA ++ +D KL+ V+
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 749
Query: 338 YGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
Y+ L+ ++ RL EA L+ +L +KPD L
Sbjct: 750 ----YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 8/266 (3%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLC------CKKGDVEMGEKLLREMSLSDACPDL 199
D AL V R M +G +PD + V+R+ CK +G +L M + D+
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
+I L R EDA ++ P++V + + G C S
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC-SLRRLDEAERIFE 631
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
K PN VT T LI C+ + + A+ + M G N VT L+D
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 691
Query: 320 CVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
+E +++L +++ E G+S YS ++ L + R++EA +F + + +L PD +A +
Sbjct: 692 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 751
Query: 379 LLLKELCMKDRVLDGFYLLDAMENMG 404
+L++ C R+++ L + M G
Sbjct: 752 ILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+ +M++ G P V Y+++I CK+G V+ + + + PD++ Y +I G C
Sbjct: 699 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 758
Query: 211 NAGRPEDAYSLLKDMRVHGCSPN 233
GR +A L + M +G P+
Sbjct: 759 KVGRLVEAALLYEHMLRNGVKPD 781
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 162/444 (36%), Gaps = 73/444 (16%)
Query: 72 KQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNM 131
K + F A GY HSA +Y L R + ++E ++ C ++
Sbjct: 21 KNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDV 80
Query: 132 FREVLKLCKEAQLADVALWVLRKM------------------------------------ 155
V+K + + D AL V ++M
Sbjct: 81 ALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF 140
Query: 156 EDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRP 215
E G P+ YNV+I++ CKK + E L M PD+ +Y T+I L AG+
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 216 EDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTS 275
+DA L +M G +P++ + + DG + + PNV T+
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 276 LIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
+I + + ++ L + +RM+ + T +LI LCD G V++A + ++L E
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 336 VSY----------GDC-------------------------YSSLVISLIRIKRLEEAEK 360
S G C Y+ L+ L+ +++EA
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATM 380
Query: 361 LFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXG 420
++R + A D + + LC+ V ++ +E+ G
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC-- 438
Query: 421 LCQKNHLAEATKLAKIMLKKSVLL 444
LC+K L EA+ L K M K V L
Sbjct: 439 LCKKKRLEEASNLVKEMSKHGVEL 462
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 37/261 (14%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A + R M G D Y + I C G V +++E+ S D+ Y ++
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I+ LC R E+A +L+K+M HG N V +A+ GL R K+G
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG- 494
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
CRP VV+Y LI C+ ++ EA +AF
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEA-----------------SAF---------------- 521
Query: 326 RLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
V +++E+G YS L+ L R ++++ A +L+ + L L+ D + ++L+ L
Sbjct: 522 --VKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGL 579
Query: 385 CMKDRVLDGFYLLDAMENMGC 405
C ++ D ++ ME+ C
Sbjct: 580 CSVGKLDDAMTVMANMEHRNC 600
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 2/199 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
L ++++L + + + LR+M G RP V YN++I CK G ++EM + P
Sbjct: 474 LIRDSRLGEASFF-LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
DL TY ++ GLC + + A L G ++++ + + GLC G
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ +C N+VTY +L++ F + N A + M G + ++ T++ LC
Sbjct: 593 ANM-EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651
Query: 318 KGCVEEAYRLVDKLVEHGV 336
V A D HG+
Sbjct: 652 CRGVSYAMEFFDDARNHGI 670
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 124 GCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
GC TV + ++ LCK + + + +V +E+ G +PD Y++++ C+ +++
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLKTYSILLCGLCRDRKIDL 552
Query: 183 GEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD 242
+L + S D++ + +I GLC+ G+ +DA +++ +M C+ NLV + + +
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 243 GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
G + G K G +P++++Y ++++ C + A+ D R G
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMG-LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIF 671
Query: 303 ANHVTAFTLIDSLCDK 318
T L+ ++ ++
Sbjct: 672 PTVYTWNILVRAVVNR 687
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 41/292 (14%)
Query: 126 VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEK 185
V T + R L+ K A+ AL VL + + G+ PD+++Y++ ++ CCK D+ M
Sbjct: 234 VTTQLLMRASLREEKPAE----ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANS 289
Query: 186 LLREMSLSDAC-PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL 244
LLREM C P TY ++I G +DA L +M G S N+V +++ G
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 245 CRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC--- 301
C++ K G PN VT++ LI+ F + + +AL +M G
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPS-PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPS 408
Query: 302 -------------------------------LANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
LAN T++ LC +G +EA L+ K
Sbjct: 409 VFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 331 LVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+ G+ Y+++++ R K ++ A +F +L LKP+ S+L+
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 136/341 (39%), Gaps = 39/341 (11%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK+ + D A +L KME G P+ V YN V+ C++ ++++ + + P
Sbjct: 453 LCKQGK-TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ TY +I+G ++A ++ M N VV I +GLC+ G
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 258 XXXX--------------------KSGD---------------CRPNVVTYTSLIQSFCE 282
K G+ PNV+TYTSL+ C+
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-C 341
++ ++AL + D M+ G + LID C + +E A L +L+E G++
Sbjct: 632 NNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI 691
Query: 342 YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
Y+SL+ + + A L++++L L+ D + L+ L ++ L M+
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Query: 402 NMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSV 442
+G GL +K + K+ + M K +V
Sbjct: 752 AVGL--VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 2/239 (0%)
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
YN +I K+G+++ EM + P++ITY +++ GLC R + A + +M+
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
G ++ A+ DG C+ + + G P+ Y SLI F
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG-LNPSQPIYNSLISGFRNLGNM 705
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSL 345
AL++ +M G + T TLID L G + A L ++ G+ + Y+ +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 346 VISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
V L + + + K+F E+ + P+ L + ++ + + + F L D M + G
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 2/199 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK ++ D AL + +M++ G + D Y +I CK+ ++E L E+ P
Sbjct: 629 LCKNNRM-DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
Y ++I G N G A L K M G +L + + DGL + G+
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
G P+ + YT ++ ++ Q+ + + + + M+ N + +I
Sbjct: 748 TEMQAVG-LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 318 KGCVEEAYRLVDKLVEHGV 336
+G ++EA+RL D++++ G+
Sbjct: 807 EGNLDEAFRLHDEMLDKGI 825
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
+++ ++IE E CV ++ + KE ++ D A+ +M G P+ + Y +
Sbjct: 569 ELLANMIE--EKRLCVSCMSYNSIIDGFFKEGEM-DSAVAAYEEMCGNGISPNVITYTSL 625
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
+ CK ++ ++ EM D+ Y +I+G C E A +L ++ G
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
+P+ + +++ G G+ K G R ++ TYT+LI + A
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG-LRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISL 349
+ M+A G + + + +++ L KG + ++ +++ ++ V+ Y++++
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 350 IRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
R L+EA +L E+L + PD +L+
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/414 (19%), Positives = 142/414 (34%), Gaps = 74/414 (17%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L E E + CV + + V+ + D A+ + +M G + V +I C
Sbjct: 291 LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSP--- 232
K D+ L +M P+ +T+ +IE G E A K M V G +P
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 233 -------------------------------NLVVLSAIFDGLCRSGSXXXXXXXXXXXX 261
N+ V + I LC+ G
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKME 470
Query: 262 KSGDCRPNVVTYTSLIQSFCERSQWN---------------------------------- 287
G PNVV+Y +++ C + +
Sbjct: 471 SRG-IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529
Query: 288 -EALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC--YSS 344
AL V++ M + N V T+I+ LC G +A L+ ++E C Y+S
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 345 LVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++ + ++ A + E+ + P+ + + L+ LC +R+ + D M+N G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 405 CXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRK 458
G C+++++ A+ L +L++ + P +S I R
Sbjct: 650 V--KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 151/352 (42%), Gaps = 24/352 (6%)
Query: 68 RCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQM----ICDLIESYEAE 123
R P+ C + F A Q +R Y K +L RN Q +C+L+ +
Sbjct: 81 RLNPEAC---LEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELV-ALNHS 136
Query: 124 GCVV---TVNMFRE----------VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
G VV V +F+E +LK+ E L AL V M ++G P + N +
Sbjct: 137 GFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSL 196
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH-G 229
+ +KG+ + + +M + PD+ T ++ C +G + A K+ G
Sbjct: 197 LSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG 256
Query: 230 CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEA 289
N+V +++ +G G + G R NVVTYTSLI+ +C++ EA
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSR-NVVTYTSLIKGYCKKGLMEEA 315
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY-SSLVIS 348
+V + ++ +A+ L+D C G + +A R+ D ++E GV +SL+
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 349 LIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
+ +L EAE++F + LKPD + L+ C V + L D M
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 154/382 (40%), Gaps = 46/382 (12%)
Query: 98 RKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMED 157
RK + + + QMI + S + C + VN + C+ + ++
Sbjct: 202 RKGENFVALHVYDQMISFEV-SPDVFTCSIVVNAY------CRSGNVDKAMVFAKETESS 254
Query: 158 FGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPED 217
G + V YN +I GDVE ++LR MS +++TY ++I+G C G E+
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 314
Query: 218 AYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
A + + ++ + + + DG CR+G + G R N SLI
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG-VRTNTTICNSLI 373
Query: 278 QSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK------- 330
+C+ Q EA + RM + +H T TL+D C G V+EA +L D+
Sbjct: 374 NGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVV 433
Query: 331 ----------------------------LVEHGVSYGDCY-SSLVISLIRIKRLEEAEKL 361
+++ GV+ + S+L+ +L ++ EA KL
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Query: 362 FRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGL 421
+ +LA L DT+ ++++ LC ++V + +LD + C G
Sbjct: 494 WENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC--KPAVQTYQALSHGY 551
Query: 422 CQKNHLAEATKLAKIMLKKSVL 443
+ +L EA + + M +K +
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIF 573
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 37/179 (20%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDA-CPDLITYITMIEGLCNAGRPEDAYS 220
P+ ++YNV I CK G +E KL ++ SD PD TY +I G AG A++
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
L +M + G PN +VTY +LI+
Sbjct: 777 LRDEMALKGIIPN------------------------------------IVTYNALIKGL 800
Query: 281 CERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG 339
C+ + A +L ++ G N +T TLID L G V EA RL +K++E G+ G
Sbjct: 801 CKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRG 859
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVL--KLCKEAQLADVALWVLRKMEDFGSRPDTVMYN 168
Q I + +E+ + +V N+ V LCK +L D + PD Y
Sbjct: 700 QKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYT 759
Query: 169 VVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH 228
++I C GD+ L EM+L P+++TY +I+GLC G + A LL +
Sbjct: 760 ILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 819
Query: 229 GCSPNLVVLSAIFDGLCRSGS 249
G +PN + + + DGL +SG+
Sbjct: 820 GITPNAITYNTLIDGLVKSGN 840
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 7/248 (2%)
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADV-ALWVLRKMEDFGSRPDTVMYNVVI 171
+CD + E V+T N+ + + DV +LW + M G D + + ++
Sbjct: 423 LCDQMCQKEVVPTVMTYNILLK--GYSRIGAFHDVLSLW--KMMLKRGVNADEISCSTLL 478
Query: 172 RLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCS 231
K GD KL + D IT MI GLC + +A +L ++ + C
Sbjct: 479 EALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 232 PNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALN 291
P + A+ G + G+ + G P + Y +LI + N+ +
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG-IFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 292 VLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLI 350
++ +RA G T LI C+ G +++AY +++E G++ + S + SL
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 351 RIKRLEEA 358
R+ +++EA
Sbjct: 658 RLDKIDEA 665
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 49/348 (14%)
Query: 92 HSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWV 151
H + Y ++ SL + ++ ++E Y++ V+ N +L K +L D A V
Sbjct: 139 HVLHAYAESGSL---SKAVEIYDYVVELYDSVPDVIACNSLLSLL--VKSRRLGD-ARKV 192
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
+M D G D ++++ C +G VE+G KL+ P+++ Y T+I G C
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG------- 264
G E+AY + K++++ G P L + +G C+ G + G
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 265 ---------------------------DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMR 297
DC+P+V TY LI C+ + A+ LD
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 298 AFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-----VSYGDCYSSLVISLIRI 352
G + N+++ LI + C + A +L+ ++ E G V+YG LV+S
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVS---- 428
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
+++A + +L+ + PD ++L+ LC R L L M
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
C+ L D AL + +M + PD Y+ +I K+ D+ K+ R M + P
Sbjct: 530 FCRSGML-DEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+++TY ++I G C G + A K+M++ PN+V + + L + S
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERS--------------QWNEALNVLDRMRAFGCLA 303
+ C PN VT+ L+Q F +++ Q + RM++ G +
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG-WS 707
Query: 304 NHVTAF-TLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
+H A+ + + LC G V+ A DK+V+ G S
Sbjct: 708 DHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFS 742
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 11/248 (4%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A+ + K+ D G PD +YN+++ CK G + L EM + PD Y T+
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I+G +G ++A + G ++V +A+ G CRSG +
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE-H 550
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG---CVE 322
P+ TY+++I + ++ A+ + M C N VT +LI+ C +G E
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 323 EAYRLVD--KLVEHGVSYGDCYSSLVISLIR-IKRLEEAEKLFRELLAGELKPDTLASSL 379
E ++ + LV + V+ Y++L+ SL + LE+A + ++ + P+ + +
Sbjct: 611 ETFKEMQLRDLVPNVVT----YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNC 666
Query: 380 LLKELCMK 387
LL+ K
Sbjct: 667 LLQGFVKK 674
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 33/276 (11%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
VLK+ +++++ + A V M + G P + +N ++ C K GD+E +K+ EM +
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
+TY +I G G+ E+A DMR G + + + +G C+ G
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 255 XXXXXXXKSG----------------------DCR--------PNVVTYTSLIQSFCERS 284
+G D R P+VV+Y +L+ + +
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMG 388
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD--CY 342
++ EA + D +RA + VT TLID LC+ G +E A RL +++ + + D Y
Sbjct: 389 KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI-FPDVITY 447
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
++LV ++ L A +++ E+L +KPD A +
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 118/295 (40%), Gaps = 73/295 (24%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGR------- 214
P V YN +I C+ G++E ++L EM+ PD+ITY T+++G G
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 215 ---------PEDAYSLL-------------KDMRVH-------GCSPNLVVLSAIFDGLC 245
D Y+ K R+H +P+L + + DGLC
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526
Query: 246 RSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM--------- 296
+ G+ + G P+ VTYT++I+ + E Q+ A N+ D M
Sbjct: 527 KVGNLVKAIEFQRKIFRVG-LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 585
Query: 297 -----------------RAF---------GCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
+AF G N +T L+ +C G ++EAYR + K
Sbjct: 586 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 645
Query: 331 LVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
+ E G+ Y+ L+ ++ EE KL++E+L E++PD L K L
Sbjct: 646 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK L A+ RK+ G PD V Y VIR + G +M L EM P
Sbjct: 525 LCKVGNLVK-AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+ITY +I G AGR E A+ +M+ G PN++ +A+ G+C++G+
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM 296
+ G PN +YT LI C+ +W E + + M
Sbjct: 644 CKMEEEG-IPPNKYSYTMLISKNCDFEKWEEVVKLYKEM 681
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 123/300 (41%), Gaps = 8/300 (2%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
PD V YN ++ K G L ++ D P ++TY T+I+GLC +G E A L
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
++M P+++ + + G ++G+ + G +P+ YT+
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG-IKPDGYAYTTRAVGEL 490
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTL-IDSLCDKGCVEEAYRLVDKLVEHG-VSYG 339
++A + + M A A +T + + ID LC G + +A K+ G V
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 340 DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDA 399
Y++++ + + + A L+ E+L L P + +L+ R+ F
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 400 MENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKS 459
M+ G G+C+ ++ EA + M ++ + PP + S ++ K+
Sbjct: 611 MKKRGV--RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI---PPNKYSYTMLISKN 665
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 22/316 (6%)
Query: 150 W-VLRKMEDFGSRPDTVMYNVVIRLCCKKGDV----EMGEKLLREMSLSDACPDLITYIT 204
W V+ +M + V+YN +I CK G EM + L++E S +C +Y +
Sbjct: 539 WDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSC---TSYNS 595
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+I+G G + A ++M +G SPN+V +++ +G C+S + KS
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS-NRMDLALEMTHEMKSM 654
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
+ + ++ Y +LI FC+++ A + + G + N +LI + G ++ A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 325 YRLVDKLVEHGVSYGDC----YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLL 380
L K+V G+S C Y++++ L++ + A L+ ELL + PD + +L
Sbjct: 715 IDLYKKMVNDGIS---CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 381 LKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKK 440
+ L K + L +L+ M+ G ++ +L EA +L ML+K
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKKDV--TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Query: 441 SVLLRPPYQDSAIDIL 456
++ + D+ ++L
Sbjct: 830 GIV----HDDTVFNLL 841
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 148/368 (40%), Gaps = 43/368 (11%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
++ D ES+ A G + + L CK+ ++ D A L+ ME G P+ V YN +
Sbjct: 436 EIFNDSFESWIAHGFMCN----KIFLLFCKQGKV-DAATSFLKMMEQKGIEPNVVFYNNM 490
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
+ C+ ++++ + EM P+ TY +I+G ++A+ ++ M
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF 550
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKS--------------------GDC---- 266
N V+ + I +GLC+ G K GD
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610
Query: 267 -----------RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
PNVVT+TSLI FC+ ++ + AL + M++ + LID
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 316 CDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
C K ++ AY L +L E G+ Y+SL+ + +++ A L+++++ + D
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730
Query: 375 LASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLA 434
+ ++ L + L + ++G GL +K +A+K+
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGI--VPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 435 KIMLKKSV 442
+ M KK V
Sbjct: 789 EEMKKKDV 796
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 129/331 (38%), Gaps = 40/331 (12%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
CK +L AL + +ME+ G PD VM++V++ CK ++E + M P
Sbjct: 356 CKGNELGK-ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS 414
Query: 199 LITYITMIEG----------------------------------LCNAGRPEDAYSLLKD 224
+ TMI+G C G+ + A S LK
Sbjct: 415 SVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKM 474
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M G PN+V + + CR + + G PN TY+ LI F +
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG-LEPNNFTYSILIDGFFKNK 533
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC--Y 342
A +V+++M A AN V T+I+ LC G +A ++ L++ C Y
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY 593
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
+S++ +++ + A + +RE+ P+ + + L+ C +R+ + M++
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Query: 403 MGCXXXXXXXXXXXXXXGLCQKNHLAEATKL 433
M G C+KN + A L
Sbjct: 654 M--ELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 119/284 (41%), Gaps = 47/284 (16%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP-DLITYITMI 206
A+ + R++ G+ PD +++++ ++ CK D+ M LLREM P TY ++I
Sbjct: 258 AVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVI 317
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
G E+A ++ +M G +++ +++ +G C+ + G
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG-L 376
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS------------ 314
P+ V ++ +++ FC+ + +A+ RM++ + V T+I
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 315 ----------------------LCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIR 351
C +G V+ A + + + G+ Y++++++ R
Sbjct: 437 IFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR 496
Query: 352 IKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFY 395
+K ++ A +F E+L L+P+ S+L +DGF+
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSIL----------IDGFF 530
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 4/239 (1%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
D A+ R+M + G P+ V + +I CK +++ ++ EM + DL Y
Sbjct: 606 TDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGA 665
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+I+G C + AY+L ++ G PN+ V +++ G G G
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 265 -DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEE 323
C ++ TYT++I + N A ++ + G + + + L++ L KG +
Sbjct: 726 ISC--DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLK 783
Query: 324 AYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
A ++++++ + V+ YS+++ R L EA +L E+L + D +LL+
Sbjct: 784 ASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 122/291 (41%), Gaps = 8/291 (2%)
Query: 93 SAYMYRKASSLL--GIDRNPQ-----MICDLIESYEAEGCVVTVNMFREVLKLCKEAQLA 145
S + + +AS+LL + NP M+ +L++S + G +T F +L +
Sbjct: 126 SIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRM 185
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A+ M D P N V+ + ++ +++ +M L D +T +
Sbjct: 186 DYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLL 245
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
+ +PE+A + + + G P+ ++ S C++
Sbjct: 246 MRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLG 305
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
+ TYTS+I +F + EA+ V+D M FG + + A +L++ C + +A
Sbjct: 306 VPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKAL 365
Query: 326 RLVDKLVEHGVSYGDCYSSLVISLI-RIKRLEEAEKLFRELLAGELKPDTL 375
L +++ E G++ S+++ + +E+A + + + + + P ++
Sbjct: 366 DLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSV 416
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CK+ + A + ++ + G P+ +YN +I G ++ L ++M
Sbjct: 670 FCKKNDMK-TAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 198 DLITYITMIEGLCNAGR---PEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
DL TY TMI+GL G D YS L D+ G P+ ++ + +GL + G
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDL---GIVPDEILHMVLVNGLSKKGQFLKAS 785
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
K D PNV+ Y+++I NEA + D M G + + T F L+ S
Sbjct: 786 KMLEEMKKK-DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDD-TVFNLLVS 843
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
G + V+++ ++ + D A+ + +KM + G D Y +I K G++ +
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
L E+ PD I ++ ++ GL G+ A +L++M+ +PN+++ S + G
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 244 LCRSGS 249
R G+
Sbjct: 810 HHREGN 815
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 2/233 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G P +Y +I C+ G+ ++L M + P + Y +I+GLC + +A
Sbjct: 243 GLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEA 302
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
Y + K+++ G +P+ VV + + G C G K G RPN Y +I
Sbjct: 303 YCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG-MRPNEFAYNVMIH 361
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
+R + + + M G ++ T+I C G +EA+ + + E GV+
Sbjct: 362 GHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTP 421
Query: 339 GD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
Y++L+ + ++E+ KL++EL A LKP +A + L++ L M D V
Sbjct: 422 NAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSV 474
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Query: 126 VVTVNMFREVLKLCKEAQLADV-ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGE 184
VV M R C++ L LW +M G RP+ YNV+I K+G++ + E
Sbjct: 319 VVYTTMIR---GFCEKGWLGSARKLWF--EMIKKGMRPNEFAYNVMIHGHFKRGEISLVE 373
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL 244
EM + +++ TMI+G C+ G+ ++A+ + K+M G +PN + +A+ G
Sbjct: 374 AFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGF 433
Query: 245 CRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQS 279
C+ G +P+ + Y +L+++
Sbjct: 434 CKENKVEKGLKLYKELKALG-LKPSGMAYAALVRN 467
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 2/223 (0%)
Query: 155 MEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGR 214
M+ G +PD V YN +I + CK ++E KL+ +M + PD+ITY T+I GL G+
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 215 PEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYT 274
P+ A +LK+M+ +GC P++ +A C + K G PN TY
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG-LSPNATTYN 355
Query: 275 SLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEH 334
+ + + + RM CL N + LI V+ A RL + +V
Sbjct: 356 LFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVK 415
Query: 335 GV-SYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G SY L+ L + ++EEAEK E++ +P ++
Sbjct: 416 GFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVS 458
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 31/405 (7%)
Query: 3 HFLNFRFSPCLHKLKTLPFSSQKMGMASLADTLYSHLHQCNGS-----VENSLSKIKPKL 57
H NFR S L ++ S K+ + D + NGS ++ SLS L
Sbjct: 12 HVSNFRLSVSF--LHSVALSDAKVPVEEEGDDAETVFRMINGSNLQVELKESLSSSGIHL 69
Query: 58 DSQCVIQVVSRC-----CPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQM 112
+ +V+ R P Q + F+ +A G+ HS++ +LG +R
Sbjct: 70 SKDLIDRVLKRVRFSHGNPIQT---LEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQ 126
Query: 113 ICD-LIESYEAEGCVVTVNMFREVL----KLCKEAQLADVALWVLRKM-EDFGSRPDTVM 166
I + LIE+ + +++ + VL KLC Q + + W +++ DF DT
Sbjct: 127 IWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVE-SFWKFKRLVPDFF---DTAC 182
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
+N ++R C++ + + + PDL T+ ++ G ++ E + +K
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSGWKSSEEAEAFFEEMKG-- 239
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
G P++V +++ D C+ + + P+V+TYT++I Q
Sbjct: 240 -KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEET-PDVITYTTVIGGLGLIGQP 297
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLV 346
++A VL M+ +GC + I + C + +A +LVD++V+ G+S +L
Sbjct: 298 DKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLF 357
Query: 347 ISLIRIKR-LEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
++ + L + +L+ +L E P+T + L+K ++V
Sbjct: 358 FRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKV 402
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 148/358 (41%), Gaps = 26/358 (7%)
Query: 124 GCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
G V VN F V+ CKE++L + AL V +M G P+ V +N++I CK GD+
Sbjct: 213 GYVENVNTFNLVIYSFCKESKLFE-ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRF 271
Query: 183 GEKLLREMSLSDA---CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSA 239
+LL +M + P+ +TY ++I G C AGR + A + DM G N A
Sbjct: 272 ALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGA 331
Query: 240 IFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAF 299
+ D R+GS G N V Y S++ A++VL M +
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKG-LVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 300 GCLANHVTAFTLIDSLCDKGCVEEAYRLV-----DKLVEHGVSYGDCYSSLVISLIRIKR 354
+ T ++ LC G V+EA KLVE V C+++L+ +R K+
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIV----CHNTLMHHFVRDKK 446
Query: 355 LEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXX 414
L A+++ +L L D ++ L+ + ++ + D M M
Sbjct: 447 LACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMN--KTSNLVIY 504
Query: 415 XXXXXGLCQKNHLAEATKLAKIMLKKSVL---------LRPPYQDSAIDILRKSEEKD 463
GL ++ A + M K ++ L+ + A DIL K +++D
Sbjct: 505 NSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQD 562
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 5/278 (1%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
++ LI SY+A C + ++F +++ C + A A V+ + G N
Sbjct: 132 HVLSGLIRSYQA--CGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNF 189
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
+ +++ K+ +EM ++ T+ +I C + +A S+ M G
Sbjct: 190 MGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGV 249
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXX-XKSGD-CRPNVVTYTSLIQSFCERSQWNE 288
PN+V + + DG C++G SG+ PN VTY S+I FC+ + +
Sbjct: 250 WPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDL 309
Query: 289 ALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVI 347
A + M G N T L+D+ G +EA RL D++ G+ Y+S+V
Sbjct: 310 AERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Query: 348 SLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
L +E A + R++ + ++ D +++++ LC
Sbjct: 370 WLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLC 407
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 120/318 (37%), Gaps = 68/318 (21%)
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
G+D N + L+++Y G E L+LC E M G +T
Sbjct: 321 GVDCNERTYGALVDAYGRAGSS------DEALRLCDE-------------MTSKGLVVNT 361
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAY----- 219
V+YN ++ +GD+E +LR+M+ + D T ++ GLC G ++A
Sbjct: 362 VIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQ 421
Query: 220 ------------------------------SLLKDMRVHGCSPNLVVLSAIFDGLCRSGS 249
+L M V G S + + + DG + G
Sbjct: 422 ISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481
Query: 250 XXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAF 309
K N+V Y S++ +R A V++ M + + VT
Sbjct: 482 LERALEIYDGMIKMNKT-SNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYN 536
Query: 310 TLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRL------EEAEKLFR 363
TL++ G VEEA ++ K+ + G+ SLV I I L E+A+++ +
Sbjct: 537 TLLNESLKTGNVEEADDILSKMQKQD---GEKSVSLVTFNIMINHLCKFGSYEKAKEVLK 593
Query: 364 ELLAGELKPDTLASSLLL 381
++ + PD++ L+
Sbjct: 594 FMVERGVVPDSITYGTLI 611
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 9/241 (3%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
V LC+ + + A+ R++ + D V +N ++ + + +++L M +
Sbjct: 403 VRGLCRNGYVKE-AVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
D I++ T+I+G G+ E A + M + NLV+ ++I +GL + G
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM-RAFGCLANHVTAFT-LI 312
++VTY +L+ + EA ++L +M + G + + F +I
Sbjct: 522 AVVNAMEI-----KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 313 DSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELK 371
+ LC G E+A ++ +VE GV Y +L+ S + + E+ +L L+ +
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVT 636
Query: 372 P 372
P
Sbjct: 637 P 637
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 116/296 (39%), Gaps = 37/296 (12%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC E A +L +M G P+ MY +I C+ +V + + P
Sbjct: 574 LCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVP 633
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
DL TY MI C P+ AY+L +DM+ P++V S + +
Sbjct: 634 DLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS--------DPELDM 685
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL--------------------------- 290
++ D P+VV YT +I +C + +
Sbjct: 686 KREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE 745
Query: 291 -NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVIS 348
N+ M+AF + LID C G + EA R+ D+++E GV Y++L+
Sbjct: 746 RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIAC 805
Query: 349 LIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++ L+EA+ +F ++ +KPD + + L+ C VL L+ M G
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 44/307 (14%)
Query: 125 CVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGE 184
C + F E L KE + +++L D V YNV K G VE
Sbjct: 370 CYCQMGNFSEAYDLFKEFRETNISL-------------DRVCYNVAFDALGKLGKVEEAI 416
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL 244
+L REM+ PD+I Y T+I G C G+ DA+ L+ +M G +P++V+ + + GL
Sbjct: 417 ELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGL 476
Query: 245 CRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMR------- 297
+G G +P VT+ +I+ + + ++A + +
Sbjct: 477 ATNGLAQEAFETLKMMENRG-VKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND 535
Query: 298 --------AFGCLANHV-------------TAFTLIDSLC-DKGCVEEAYRLVDKLVEHG 335
A GCL + FTL SLC +K + +A L+D++ + G
Sbjct: 536 ASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLG 595
Query: 336 VS-YGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGF 394
V Y L+ + R+ + +A + F L+ ++ PD ++++ C + +
Sbjct: 596 VEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAY 655
Query: 395 YLLDAME 401
L + M+
Sbjct: 656 ALFEDMK 662
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 18/313 (5%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
+D+ + ++E G D Y +V++ + D E EKLL + +S+ + Y+
Sbjct: 198 SDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLN 257
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVV--------LSAIFDGLCRSGSXXXXXXX 256
IEGLC + AY LL+ +R N++V + GLC
Sbjct: 258 FIEGLCLNQMTDIAYFLLQPLR----DANILVDKSDLGIAYRKVVRGLCYEMRIEDAESV 313
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
K G P+V Y+++I+ + +A++V ++M N V +++ C
Sbjct: 314 VLDMEKHG-IDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
G EAY L + E +S CY+ +L ++ ++EEA +LFRE+ + PD +
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVI 432
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAK 435
+ L+ C++ + D F L+ M+ G GL EA + K
Sbjct: 433 NYTTLIGGCCLQGKCSDAFDLMIEMDGTG--KTPDIVIYNVLAGGLATNGLAQEAFETLK 490
Query: 436 IMLKKSVLLRPPY 448
+M + V +P Y
Sbjct: 491 MMENRGV--KPTY 501
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 16/213 (7%)
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
+PD V Y+V++ D E+ K REM D PD++ Y MI C+ + Y+
Sbjct: 667 KPDVVTYSVLL-----NSDPELDMK--REMEAFDVIPDVVYYTIMINRYCHLNDLKKVYA 719
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
L KDM+ P++V + + K+ D +P+V YT LI
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLKN--------KPERNLSREMKAFDVKPDVFYYTVLIDWQ 771
Query: 281 CERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD 340
C+ EA + D+M G + LI C G ++EA + D+++E GV
Sbjct: 772 CKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV 831
Query: 341 C-YSSLVISLIRIKRLEEAEKLFRELLAGELKP 372
Y++L+ R + +A KL +E+L +KP
Sbjct: 832 VPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
+D L + R+ME F PD V Y ++I C D++ L ++M + PD++TY
Sbjct: 679 SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTV 738
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+++ +PE +L ++M+ P++ + + D C+ G +SG
Sbjct: 739 LLKN-----KPER--NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESG 791
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
P+ YT+LI C+ EA + DRM G + V LI C G V +A
Sbjct: 792 -VDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKA 850
Query: 325 YRLVDKLVEHGV 336
+LV +++E G+
Sbjct: 851 VKLVKEMLEKGI 862
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 117/297 (39%), Gaps = 10/297 (3%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ V KM R + V+ + +++ C+ G+ L +E ++ D + Y +
Sbjct: 345 AVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD 404
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
L G+ E+A L ++M G +P+++ + + G C G +G
Sbjct: 405 ALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKT- 463
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P++V Y L EA L M G +VT +I+ L D G +++A
Sbjct: 464 PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAF 523
Query: 328 VDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELK-PDTLASSLLLKELCM 386
+ L EH D +S+V L+ A F + E P ++ +L
Sbjct: 524 YESL-EHKSREND--ASMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAE 577
Query: 387 KDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVL 443
KD + LLD M +G C+ N++ +A + +I++ K ++
Sbjct: 578 KDYISKAQDLLDRMWKLGV--EPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV 632
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
CK L + A + +M + G PD Y +I CCK G ++ + + M S PD
Sbjct: 772 CKIGDLGE-AKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
++ Y +I G C G A L+K+M G P LSA+
Sbjct: 831 VVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 8/266 (3%)
Query: 138 LCKEAQLADVALWVLR--KMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDA 195
LCKE + + ++++ R D P ++N+++ + ++ EKL EM +
Sbjct: 222 LCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNV 281
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG--SXXXX 253
P ++TY T+IEG C R + A +L++M++ N +V + I DGL +G S
Sbjct: 282 KPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALG 341
Query: 254 XXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLID 313
+SG P +VTY SL+++FC+ A +L M G T
Sbjct: 342 MMERFFVCESG---PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFK 398
Query: 314 SLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLI-RIKRLEEAEKLFRELLAGELKP 372
EE L KL+E G S L++ ++ +L A ++ +E+ + P
Sbjct: 399 YFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDP 458
Query: 373 DTLASSLLLKELCMKDRVLDGFYLLD 398
D L +++L+ LC + + + F D
Sbjct: 459 DLLTTTMLIHLLCRLEMLEEAFEEFD 484
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 3/221 (1%)
Query: 108 RNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMY 167
R Q+ +++E + + +F ++ EA AL ++ + S P V Y
Sbjct: 299 RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTY 358
Query: 168 NVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRV 227
N +++ CK GD+ K+L+ M P TY + + E+ +L +
Sbjct: 359 NSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIE 418
Query: 228 HGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWN 287
G SP+ + I LC G G P+++T T LI C
Sbjct: 419 AGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRG-IDPDLLTTTMLIHLLCRLEMLE 477
Query: 288 EALNVLDRMRAFGCLANHVTAFTLIDS-LCDKGCVEEAYRL 327
EA D G + ++T F +ID+ L KG + A RL
Sbjct: 478 EAFEEFDNAVRRGIIPQYIT-FKMIDNGLRSKGMSDMAKRL 517
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 166/408 (40%), Gaps = 23/408 (5%)
Query: 58 DSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLG----IDRNPQMI 113
D + V + ++ C Q + FF W +SG+RH+ + + +LG + + +I
Sbjct: 46 DQKTVCEALT-CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALI 104
Query: 114 CDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
+I + E+ VT FR V K A L A+ K++DF R +T YN+V L
Sbjct: 105 NRMIGNTESVPNHVT---FRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDAL 161
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYIT--MIEGLCNAGRPEDAYSLLKDMRVHGCS 231
C K VE E + + + T I ++ G G K M G +
Sbjct: 162 CEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVT 221
Query: 232 PNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALN 291
+L S D +C+SG KS + +VV Y ++I++ +
Sbjct: 222 KDLFSYSIYMDIMCKSGK-PWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIR 280
Query: 292 VLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIR 351
V MR GC N T T+I LC+ G + +AYR++D++ + G C + +
Sbjct: 281 VFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRG-----CQPDSITYMCL 335
Query: 352 IKRLEEAEK---LFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXX 408
RLE+ + LF ++ ++P +L+++ + Y+ M+ G
Sbjct: 336 FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG--DT 393
Query: 409 XXXXXXXXXXXGLCQKNHLAEATKLAKIMLKK--SVLLRPPYQDSAID 454
L QK L A + + M+++ S RP + ++D
Sbjct: 394 PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRRPELVEKSLD 441
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 18/335 (5%)
Query: 115 DLIESYEAEG----CVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
DL+ E EG CV N K L D AL R+M + G D V Y+++
Sbjct: 228 DLVRRLEDEGFEFDCVFYSNWIHGYFK---GGALVD-ALMQDREMVEKGMNRDVVSYSIL 283
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
I K+G+VE LL +M P+LITY +I GLC G+ E+A+ L + G
Sbjct: 284 IDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGI 343
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
+ + + DG+CR G+ + G +P+++TY ++I C + +EA
Sbjct: 344 EVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRG-IQPSILTYNTVINGLCMAGRVSEAD 402
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVI-SL 349
V + G + + +T TL+DS ++ + + +E + ++++ +
Sbjct: 403 EV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAF 457
Query: 350 IRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXX 409
+ + EA+ L+R + +L PDT + ++K C ++ + + + +
Sbjct: 458 LLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK---SSVS 514
Query: 410 XXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLL 444
LC+K L AT++ + +K + L
Sbjct: 515 AAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYL 549
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 141/348 (40%), Gaps = 50/348 (14%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
L KE + + AL +L KM G P+ + Y +IR CK G +E L +
Sbjct: 287 LSKEGNVEE-ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEV 345
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D Y+T+I+G+C G A+S+L DM G P+++ + + +GLC +G
Sbjct: 346 DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV- 404
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR---------------------- 295
S +V+TY++L+ S+ + + L + R
Sbjct: 405 -----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLL 459
Query: 296 MRAFG-------------CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY 342
M A+G + T T+I C G +EEA + ++L + VS CY
Sbjct: 460 MGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCY 519
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK--DRVLDGF-YLLDA 399
+ ++ +L + L+ A ++ EL L D S LL + D+ + G Y L+
Sbjct: 520 NRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQ 579
Query: 400 MENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPP 447
+ + C LC++ A ++ IM +K + + P
Sbjct: 580 LNSDVCLGMLNDAILL-----LCKRGSFEAAIEVYMIMRRKGLTVTFP 622
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 13/278 (4%)
Query: 166 MYNVVIRLCCKKGDVEMGEK---LLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
M N I L CK+G E + ++R L+ P T+++ L + R DAY L+
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS-----TILKTLVDNLRSLDAYLLV 642
Query: 223 KDM-RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+ S +++ + I +GLC+ G KS N +TY SLI C
Sbjct: 643 VNAGETTLSSMDVIDYTIIINGLCKEG-FLVKALNLCSFAKSRGVTLNTITYNSLINGLC 701
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGD 340
++ EAL + D + G + + VT LID+LC +G +A +L+D +V G V
Sbjct: 702 QQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNII 761
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
Y+S+V ++ + E+A ++ + G + PD S ++K C K + + +
Sbjct: 762 IYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEF 821
Query: 401 ENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIML 438
++ G C K + EA L + ML
Sbjct: 822 KDKNI--SADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 25/265 (9%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCKE L AL + + G +T+ YN +I C++G + +L + P
Sbjct: 665 LCKEGFLVK-ALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 723
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+TY +I+ LC G DA LL M G PN+++ ++I DG C+ G
Sbjct: 724 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 783
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
G P+ T +S+I+ +C++ EAL+V + A+ LI C
Sbjct: 784 SRKMM-GRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCT 842
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
KG +EEA L+ +++ S V+ LI E AE E + G
Sbjct: 843 KGRMEEARGLLREML---------VSESVVKLINRVDAELAES---ESIRG--------- 881
Query: 378 SLLLKELCMKDRVLDGFYLLDAMEN 402
L ELC + RV +LD + +
Sbjct: 882 --FLVELCEQGRVPQAIKILDEISS 904
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 42/314 (13%)
Query: 162 PDTVMYNVVIR-LCCKKGDVEMGEKLLRE-MSLSDACPDLITYITMIEGLCNAGRPEDAY 219
P T M + +I + D G +LR+ + A P +T+ ++I G ++A
Sbjct: 95 PRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAI 154
Query: 220 SLLKDMRVHGCSPNL--VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
+L+ M + V SA+ G C+ G SG PN+VTYT+L+
Sbjct: 155 EVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLV 214
Query: 278 QSFCERSQWNEALNVLDRMR----AFGCL--ANHVTAF---------------------- 309
+ C+ + +E +++ R+ F C+ +N + +
Sbjct: 215 SALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMN 274
Query: 310 -------TLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKL 361
LID L +G VEEA L+ K+++ GV Y++++ L ++ +LEEA L
Sbjct: 275 RDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVL 334
Query: 362 FRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGL 421
F +L+ ++ D L+ +C K + F +L ME G GL
Sbjct: 335 FNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI--QPSILTYNTVINGL 392
Query: 422 CQKNHLAEATKLAK 435
C ++EA +++K
Sbjct: 393 CMAGRVSEADEVSK 406
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 152/349 (43%), Gaps = 23/349 (6%)
Query: 38 HLHQCNGSVENSLSKIKPKLDSQCV-IQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYM 96
H H N + ++ + + + + + +++ +R P +G R ++ Y S
Sbjct: 185 HWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEP---TVGDRVQVYNAMMGVYSRSG-K 240
Query: 97 YRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVL--KLCKEAQLADVALWVLRK 154
+ KA +L+++ GCV + F ++ +L ++A+ +L
Sbjct: 241 FSKAQ-------------ELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 155 MEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGR 214
+ + G RPD + YN ++ C + +++ K+ +M PDL TY MI G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 215 PEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYT 274
+A L ++ + G P+ V +++ R + K G + + +TY
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK-DEMTYN 406
Query: 275 SLIQSFCERSQWNEALNVLDRMRAF-GCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
++I + ++ Q + AL + M+ G + +T LIDSL EA L+ ++++
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 334 HGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
G+ YS+L+ + + EEAE F +L KPD LA S++L
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 120/282 (42%), Gaps = 5/282 (1%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLAD 146
SG R A Y S D N + E EA C + + ++ + LA
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 147 VALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
A + ++E G PD V YN ++ ++ + E +++ ++M D +TY T+I
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Query: 207 EGLCNAGRPEDAYSLLKDMR-VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
G+ + A L KDM+ + G +P+ + + + D L ++ G
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG- 468
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
+P + TY++LI + + + EA + M G +++ ++D L +A+
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Query: 326 RLVDKLVE--HGVSYGDCYSSLVISLIRIKRLEEAEKLFREL 365
L ++ H SY Y +++ L++ R ++ +K R++
Sbjct: 529 GLYRDMISDGHTPSY-TLYELMILGLMKENRSDDIQKTIRDM 569
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 126/291 (43%), Gaps = 4/291 (1%)
Query: 116 LIESYEAEGCVVTVNMFREVLKL-CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+ S +A G + T+ ++R +++L CK ++ D + V +ME+ + + ++N ++++
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMV-SEMEEANFKVELAIWNSMLKMY 937
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
D + ++ + + + PD TY T+I C RPE+ Y L++ MR G P L
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
++ + G + + Y ++++ + ++A +L
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHTMMKISRDSGSDSKAEKLLQ 1056
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIK 353
M+ G T L+ S G +EA +++ L + V YSS++ + +R K
Sbjct: 1057 MMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSK 1116
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ E+ L+PD + ++ ++ LL A+E++G
Sbjct: 1117 DYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIG 1167
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 109/244 (44%), Gaps = 7/244 (2%)
Query: 166 MYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAG--RPEDAYSLLK 223
+YN ++ + + G ++L+ M PDLI++ T+I +G P A LL
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 224 DMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER 283
+R G P+ + + + C S ++ C+P++ TY ++I +
Sbjct: 287 MVRNSGLRPDAITYNTLLSA-CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 284 SQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CY 342
EA + + G + VT +L+ + + E+ + ++ + G + Y
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 343 SSLVISLIRIKRLEEAEKLFREL--LAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
++++ + +L+ A +L++++ L+G PD + ++L+ L +R ++ L+ M
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGR-NPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 401 ENMG 404
++G
Sbjct: 465 LDVG 468
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 116/295 (39%), Gaps = 4/295 (1%)
Query: 166 MYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDM 225
MY +I K+ + E ++ + S PDL T+ +++ G E A ++ M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 226 RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQ 285
G SP + ++ + LC G G + + + ++ +F
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMG-FKISKSSILLMLDAFARAGN 872
Query: 286 WNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSS 344
E + M+A G L +I+ LC V +A +V ++ E ++S
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 345 LVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++ I+ ++ ++++ + L+PD + L+ C R +G+ L+ M N+G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 405 CXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKS 459
G ++ L +A +L + +L K + L + + + I R S
Sbjct: 993 LDPKLDTYKSLISAFG--KQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDS 1045
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 137/324 (42%), Gaps = 24/324 (7%)
Query: 78 VRFFIWAGFQSGYRHSAYMYRKASSLLGI----DRNPQMICDLIESYEAEGCVVTVNMFR 133
+ FF W Q+ Y H R ++G+ R I +IE + GC + +F
Sbjct: 56 LNFFFWCAKQNNYFHDD---RAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFL 112
Query: 134 EVLKLCKEAQLADVALWVLRKMEDFGSRPDT----VMYNVVIRLCCKKGDVEMGEKLLRE 189
+L++ + D A+ V M FG P+T +M +V +L G +E+ E +
Sbjct: 113 LLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGI--- 169
Query: 190 MSLSDACPDLITYITMIEGLCNAGRPEDAYSL---LKDMRVHGCSPNLVVLSAIFDGLCR 246
+ ++ + C+ G D + LK M G PN I CR
Sbjct: 170 -----RFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCR 224
Query: 247 SGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHV 306
+G SG +V ++ L+ F + +A+++ ++M GC N V
Sbjct: 225 TGCVSEAFQVVGLMICSG-ISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 307 TAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVI-SLIRIKRLEEAEKLFREL 365
T +LI D G V+EA+ ++ K+ G++ +L+I + R+ R EEA K+F L
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 366 LAGELKPDTLASSLLLKELCMKDR 389
+L PD + +L LC+ +
Sbjct: 344 EKRKLVPDQYTFASILSSLCLSGK 367
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
VL++M G P+ + ++RLCC+ G V +++ M S + + ++ G
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
+G P+ A L M GCSPNLV +++ G G G P++
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEG-LAPDI 317
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
V +I ++ ++ EA V + + + T +++ SLC G + LV +
Sbjct: 318 VLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG----KFDLVPR 373
Query: 331 LVEHGV 336
+ HG+
Sbjct: 374 -ITHGI 378
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 124/329 (37%), Gaps = 52/329 (15%)
Query: 82 IWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKE 141
+W+ SG+ S PQ DL GC + + ++K +
Sbjct: 249 VWSMLVSGFFRSG--------------EPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVD 294
Query: 142 AQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLIT 201
+ D A VL K++ G PD V+ N++I + G E K+ + PD T
Sbjct: 295 LGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYT 354
Query: 202 YITMIEGLCNAGR----PEDAYSLLKDM-------------RVHGCSPNLVVLSAI---- 240
+ +++ LC +G+ P + + D ++ S L VLS +
Sbjct: 355 FASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKD 414
Query: 241 -----------FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEA 289
LCR G+ K + ++++I S E ++N A
Sbjct: 415 FALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKK-HLDAHFHSAIIDSLIELGKYNTA 473
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD--CYSSLVI 347
+++ R + V+ I L +EEAY L + E G+ Y + Y +++
Sbjct: 474 VHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGI-YPNRRTYRTIIS 532
Query: 348 SLIRIKRLEEAEKLFRELL--AGELKPDT 374
L + K E+ K+ RE + EL P+T
Sbjct: 533 GLCKEKETEKVRKILRECIQEGVELDPNT 561
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/360 (18%), Positives = 142/360 (39%), Gaps = 40/360 (11%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
EG F ++L+LC A V+ M G ++++++ + G+ +
Sbjct: 205 GEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQ 264
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
L +M P+L+TY ++I+G + G ++A+++L ++ G +P++V+ + +
Sbjct: 265 KAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMI 324
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWN-------------- 287
R G K P+ T+ S++ S C +++
Sbjct: 325 HTYTRLGRFEEARKVFTSLEKR-KLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFD 383
Query: 288 ------------------EALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA---YR 326
AL VL M + T + +LC G A Y+
Sbjct: 384 LVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYK 443
Query: 327 LVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
++ K +H ++ +S+++ SLI + + A LF+ + + D ++ ++ +K L
Sbjct: 444 IIIKEKKHLDAH--FHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVR 501
Query: 387 KDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRP 446
R+ + + L M+ G GLC++ + K+ + +++ V L P
Sbjct: 502 AKRIEEAYSLCCDMKEGGI--YPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDP 559
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 174/411 (42%), Gaps = 35/411 (8%)
Query: 11 PCLHKLKTLPFSSQKMGMASLADTLYSHLHQCN--GSVENSLSKIKPKLDSQCVIQVVSR 68
P + L P S+ + ++S + SH H N + S+ + P+ + ++ V
Sbjct: 19 PLCNLLSVYPKSTPRSFLSSY-NPNSSHFHSRNLLQATHVSVQEAIPQSEKSKLVDV--- 74
Query: 69 CCPKQCQLGVRFFIWAGFQSG----YRHSAYMYRKAS------SLLGIDRNPQMICDLIE 118
P + ++W +S R +Y R +S SL N +CD+I
Sbjct: 75 DLPIPEPTASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLDACKPNEADVCDVIT 134
Query: 119 SYEA----EGCVVTVNMFREVLKLCKEAQLADVALWVLRKM-EDFGSRPDTVMYNVVIRL 173
+ + VVT+N + A VL + E + ++YNV +++
Sbjct: 135 GFGGKLFEQDAVVTLNNMTN----------PETAPLVLNNLLETMKPSREVILYNVTMKV 184
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
K D+E EKL EM PD T+ T+I G P+ A + M GC P+
Sbjct: 185 FRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPD 244
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
V ++A+ D R+G+ ++ R + VT+++LI+ + ++ LN+
Sbjct: 245 NVTMAAMIDAYGRAGN-VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIY 303
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRI 352
+ M+A G N V LIDS+ +A + L+ +G + Y++LV + R
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA 363
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLD-GFYLLDAMEN 402
+ ++A ++RE+ L + + LL +C +R +D F + M+N
Sbjct: 364 RYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIFQDMKN 413
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 128/313 (40%), Gaps = 8/313 (2%)
Query: 53 IKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDR--NP 110
IKP D+ ++S C +Q + R W S + A+ + R N
Sbjct: 206 IKP--DNATFTTIIS--CARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV 261
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
M L + E + F ++++ + D L + +M+ G +P+ V+YN +
Sbjct: 262 DMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRL 321
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
I + + + +++ + P+ TY ++ A +DA ++ ++M+ G
Sbjct: 322 IDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 381
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD-CRPNVVTYTSLIQSFCERSQWNEA 289
S +++ + + +C K+ + C P+ T++SLI + + +EA
Sbjct: 382 SLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISL 349
L +MR G ++I V++ R D+++E G++ D + ++++
Sbjct: 441 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV 500
Query: 350 IRIKRLEEAEKLF 362
+ EE KL
Sbjct: 501 MTQTPSEEIGKLI 513
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 22/287 (7%)
Query: 71 PKQCQLGVR----FFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDL---IESYEAE 123
PK+ +G++ FF W G+ H+ R + LL + + + D + E
Sbjct: 100 PKKVSIGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENG 159
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
VVT ++K E AL +M+++ +PD YN +I C+ G+ +
Sbjct: 160 KNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKA 219
Query: 184 EKLLREMSLSD--ACPDLITYITMIEGLCNAG-----------RPEDAYSLLKDMRVHGC 230
LL +M L PD TY +I C G R +A + ++M G
Sbjct: 220 RFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGF 279
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
P++V + + DG C++ G C PN VTY S I+ + ++ A+
Sbjct: 280 VPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKG-CVPNQVTYNSFIRYYSVTNEIEGAI 338
Query: 291 NVLDRMRAFGCLANHVTAFT-LIDSLCDKGCVEEAYRLVDKLVEHGV 336
++ M+ G + +T LI +L + EA LV ++VE G+
Sbjct: 339 EMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
Query: 269 NVVTYTS---LIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
NVVT S L++ E EAL RM+ + C + T+I++LC G ++A
Sbjct: 161 NVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKAR 220
Query: 326 RLVDKLVEHGVSYGD---CYSSLVISLIRI-----------KRLEEAEKLFRELLAGELK 371
L+D++ G Y Y+ L+ S R +R+ EA ++FRE+L
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 372 PDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
PD + + L+ C +R+ L + M+ GC
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGC 314
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 130/326 (39%), Gaps = 39/326 (11%)
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEG 208
L ++ K+E G +PDT+++N +I + G+++ K+ +M S P T+ T+I+G
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Query: 209 ------------------------------------LCNAGRPEDAYSLLKDMRVHGCSP 232
CN + E+A++++ M+ +G P
Sbjct: 434 YGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKP 493
Query: 233 NLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNV 292
++V + + R GS +PNV T +++ +CE + EAL
Sbjct: 494 DVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRF 553
Query: 293 LDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIR 351
RM+ G N +LI + ++ +VD + E GV +S+L+ +
Sbjct: 554 FYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSS 613
Query: 352 IKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXX 411
+ ++ E+++ ++L G + PD A S+L K +L+ M G
Sbjct: 614 VGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGV--RPNV 671
Query: 412 XXXXXXXXGLCQKNHLAEATKLAKIM 437
G C + +A ++ K M
Sbjct: 672 VIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
V+ ME+FG +PD V ++ ++ GD++ E++ +M PD+ + + +G
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYA 647
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
AG PE A +L MR G PN+V+ + I G C +G PN+
Sbjct: 648 RAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL 707
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
TY +LI F E Q +A +L M + T + D
Sbjct: 708 TTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 135/339 (39%), Gaps = 41/339 (12%)
Query: 86 FQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLA 145
+ G++ S Y + L ++ + LI E G +F ++ E+
Sbjct: 346 IEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNL 405
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC--PDLITYI 203
D A+ + KM++ G +P +N +I+ K G +E +LL +M L D P+ T
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL-DMMLRDEMLQPNDRTCN 464
Query: 204 TMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSA------------------------ 239
+++ CN + E+A++++ M+ +G P++V +
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLH 524
Query: 240 ------------IFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWN 287
I +G C G + G PN+ + SLI+ F + +
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG-VHPNLFVFNSLIKGFLNINDMD 583
Query: 288 EALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLV 346
V+D M FG + VT TL+++ G ++ + ++E G+ +S L
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 347 ISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
R E+AE++ ++ ++P+ + + ++ C
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 8/211 (3%)
Query: 179 DVEMGEKLLREM-----SLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
D E G LR S C D+ + ++ GL GRP++A+S+ + G P+
Sbjct: 294 DSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPS 353
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
L+ + + L R K+G +P+ + + ++I + E ++A+ +
Sbjct: 354 LITYTTLVTALTRQKHFHSLLSLISKVEKNG-LKPDTILFNAIINASSESGNLDQAMKIF 412
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYS--SLVISLIR 351
++M+ GC T TLI G +EE+ RL+D ++ + + + LV +
Sbjct: 413 EKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCN 472
Query: 352 IKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
+++EEA + ++ + +KPD + + L K
Sbjct: 473 QRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 40/276 (14%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
V C + ++ + A ++ KM+ +G +PD V +N + + + G E ++ L +
Sbjct: 467 VQAWCNQRKIEE-AWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 195 AC-PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXX 253
P++ T T++ G C G+ E+A M+ G PNL V +++ G
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 254 XXXXXXXXKSGDCRPNVVTYTSLIQSF--------CER---------------------- 283
+ G +P+VVT+++L+ ++ CE
Sbjct: 586 GEVVDLMEEFG-VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAK 644
Query: 284 -----SQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE-HGVS 337
+ +A +L++MR FG N V +I C G +++A ++ K+ G+S
Sbjct: 645 GYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLS 704
Query: 338 YG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKP 372
Y +L+ K+ +AE+L +++ + P
Sbjct: 705 PNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 101 SSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGS 160
SS+ + R ++ D++E G ++ F + K A + A +L +M FG
Sbjct: 612 SSVGDMKRCEEIYTDMLEG----GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGV 667
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREM-SLSDACPDLITYITMIEGLCNAGRPEDAY 219
RP+ V+Y +I C G+++ ++ ++M + P+L TY T+I G A +P A
Sbjct: 668 RPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAE 727
Query: 220 SLLKDMRVHGCSPNLVVLSAIFDG 243
LLKDM P + I DG
Sbjct: 728 ELLKDMEGKNVVPTRKTMQLIADG 751
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 7/272 (2%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
V +LCK + A+ ++ KMED G +TV YN ++R C G + + + +
Sbjct: 148 VNQLCKRGNVG-YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
P+ TY ++E ++A LL ++ V G PNLV + + G C+ G
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
G + NVV+Y L++ C +W EA ++L M + VT LI+S
Sbjct: 267 ALFRELPAKG-FKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSY---GDCYSSLVISLIRIKRLEEAEKLFRELLAGELK 371
L G E+A +++ ++ + + Y+ ++ L + +++ K E++ K
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Query: 372 PDTLASSLLLKELCMKD-RVLDGFYLLDAMEN 402
P+ + + LC + +V + FY++ ++ N
Sbjct: 386 PNE-GTYNAIGSLCEHNSKVQEAFYIIQSLSN 416
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 157/372 (42%), Gaps = 13/372 (3%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+E +G + +L+ + + D A+ +L ++ G P+ V YNV++ C
Sbjct: 198 FVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFC 257
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
K+G + L RE+ ++++Y ++ LC GR E+A SLL +M +P++V
Sbjct: 258 KEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVV 317
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSG-DCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+ + + L G K R +Y +I C+ + + + LD
Sbjct: 318 TYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLD 377
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGC-VEEAYRLVDKLV-EHGVSYGDCYSSLVISLIRI 352
M C N T + I SLC+ V+EA+ ++ L + D Y S++ SL R
Sbjct: 378 EMIYRRCKPNEGT-YNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRK 436
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM-ENMGCXXXXXX 411
A +L E+ PD S L++ LC++ +L M E+ C
Sbjct: 437 GNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENC--KPTV 494
Query: 412 XXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKSEEKDLVDLVNQL 471
GLC+ A ++ ++M++K R P + + ++ +D ++L ++
Sbjct: 495 DNFNAMILGLCKIRRTDLAMEVFEMMVEKK---RMPNETTYAILVEGIAHEDELELAKEV 551
Query: 472 TG---IRKGLGQ 480
+RK +GQ
Sbjct: 552 LDELRLRKVIGQ 563
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 17/262 (6%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK +L A+ V+ M G PD Y ++ CK+G+V +L+ +M
Sbjct: 116 LCKANRLKK-AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPS 174
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS-GSXXXXXXX 256
+ +TY ++ GLC G + ++ + G +PN S + + + G+
Sbjct: 175 NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
K G+ PN+V+Y L+ FC+ + ++A+ + + A G AN V+ L+ LC
Sbjct: 235 DEIIVKGGE--PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGD------CYSSLVISLIRIKRLEEAEKLFRELLAGEL 370
G EEA L+ ++ GD Y+ L+ SL R E+A ++ +E+ G
Sbjct: 293 CDGRWEEANSLLAEM-----DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNH 347
Query: 371 KPDTLASSL--LLKELCMKDRV 390
+ A+S ++ LC + +V
Sbjct: 348 QFRVTATSYNPVIARLCKEGKV 369
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 2/243 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G +P+ ++ CK ++ +++ M S PD Y ++ LC G A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
L++ M HG N V +A+ GLC GS + G PN TY+ L++
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG-LAPNAFTYSFLLE 219
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY 338
+ + +EA+ +LD + G N V+ L+ C +G ++A L +L G
Sbjct: 220 AAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 339 GDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
Y+ L+ L R EEA L E+ G+ P + ++L+ L R +L
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL 339
Query: 398 DAM 400
M
Sbjct: 340 KEM 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVE 322
+G +PNV T L+ C+ ++ +A+ V++ M + G + + L++ LC +G V
Sbjct: 99 TGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG 158
Query: 323 EAYRLVDKLVEHGV-SYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
A +LV+K+ +HG S Y++LV L + L ++ + L+ L P+ S LL
Sbjct: 159 YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218
Query: 382 KELCMKDRVLD 392
E K+R D
Sbjct: 219 -EAAYKERGTD 228
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 7/257 (2%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL ++ D D V YNV K G VE +LL+EM PD+I Y T+I+
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G C G+ DA L+ +M +G SP+L+ + + GL R+G G +
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP-K 490
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PN VT + +I+ C + EA + + C N + + C+ G ++AY+
Sbjct: 491 PNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ-KCPENKA---SFVKGYCEAGLSKKAYKA 546
Query: 328 VDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
+L E+ + Y L SL LE+A + +++ A ++P ++ C
Sbjct: 547 FVRL-EYPLR-KSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKL 604
Query: 388 DRVLDGFYLLDAMENMG 404
+ V + L D M G
Sbjct: 605 NNVREAQVLFDTMVERG 621
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 93/237 (39%), Gaps = 14/237 (5%)
Query: 136 LKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDA 195
LC E L + A VL+KM + P M +I CK +V + L M
Sbjct: 564 FSLCIEGYL-EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGL 622
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR--------- 246
PDL TY MI C + A SL +DM+ G P++V + + D +
Sbjct: 623 IPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETC 682
Query: 247 ---SGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
+ +VV YT LI C+ + +A + DRM G
Sbjct: 683 SVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVIS-LIRIKRLEEAE 359
+ V TLI S KG ++ A LV +L + + + + V S ++ KR + E
Sbjct: 743 DMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQYGE 799
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 107/277 (38%), Gaps = 47/277 (16%)
Query: 149 LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD---------- 198
L + +M+ G +P+ V +V+I C V+ E SL CP+
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFS--SLEQKCPENKASFVKGYC 535
Query: 199 --------------------LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLS 238
YI + LC G E A+ +LK M + P +
Sbjct: 536 EAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCG 595
Query: 239 AIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRA 298
+ C+ + + G P++ TYT +I ++C ++ +A ++ + M+
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERG-LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQ 654
Query: 299 FGCLANHVTAFTLID-------------SLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSS 344
G + VT L+D S+ + +A ++ + G+ CY+
Sbjct: 655 RGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTV 714
Query: 345 LVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
L+ ++ LE+A +LF ++ L+PD +A + L+
Sbjct: 715 LIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLI 751
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 12/255 (4%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
V LC++ L + A+ ++ FG Y I C G+ E L+ E+
Sbjct: 223 VKALCRKGNLEEAAMLLIENESVFG-------YKTFINGLCVTGETEKAVALILELIDRK 275
Query: 195 --ACPDLITYITMI-EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
A DL + M+ G CN + + A S++ +M G ++ A+ D C++ +
Sbjct: 276 YLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLP 335
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
G + N V + ++Q +C+ EAL R + V
Sbjct: 336 EALGFLDKMLGKG-LKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVA 394
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGEL 370
D+L G VEEA+ L+ ++ + G+ Y++L+ ++ +A L E++ +
Sbjct: 395 FDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGM 454
Query: 371 KPDTLASSLLLKELC 385
PD + ++L+ L
Sbjct: 455 SPDLITYNVLVSGLA 469
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 145/316 (45%), Gaps = 34/316 (10%)
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGD-- 179
EG + V + ++++ + ++ D A+ V +M + G RP+ Y++++ L +G
Sbjct: 298 TEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLV 357
Query: 180 -----VEMGEK---------LLREMS----LSDA---------CP---DLITYITMIEGL 209
VE+ ++ L+R +S +S+A P + +Y++M+E L
Sbjct: 358 RLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 210 CNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPN 269
C AG+ +A +L + G + ++ + +F L + K G P+
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPS-PD 476
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD 329
+ TY LI SF + +EA+N+ + + C + ++ +LI+ L G V+EA+
Sbjct: 477 IFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFK 536
Query: 330 KLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKD 388
++ E G++ YS+L+ + +R+E A LF E+L +P+ + ++LL L
Sbjct: 537 EMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNG 596
Query: 389 RVLDGFYLLDAMENMG 404
R + L M+ G
Sbjct: 597 RTAEAVDLYSKMKQQG 612
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 1/190 (0%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLAD 146
+ G MY S LG + I DL E + +G + + ++ D
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 147 VALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
A+ + ++E +PD + YN +I K GDV+ +EM PD++TY T++
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
E R E AYSL ++M V GC PN+V + + D L ++G + G
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG-L 613
Query: 267 RPNVVTYTSL 276
P+ +TYT L
Sbjct: 614 TPDSITYTVL 623
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 7/245 (2%)
Query: 94 AYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVL 152
+Y+ R S L + ++ CD+ S+ +G + + +L+ LC + + A+ +L
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMW-SFPVKG---ERDSYMSMLESLCGAGKTIE-AIEML 430
Query: 153 RKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA 212
K+ + G DT+MYN V K + L +M PD+ TY +I
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 213 GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVT 272
G ++A ++ +++ C P+++ +++ + L ++G + G P+VVT
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG-LNPDVVT 549
Query: 273 YTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV 332
Y++L++ F + + A ++ + M GC N VT L+D L G EA L K+
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609
Query: 333 EHGVS 337
+ G++
Sbjct: 610 QQGLT 614
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 7/235 (2%)
Query: 82 IWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCK 140
+W+ G R S YM SL G + + I +++ +G V M+ V L K
Sbjct: 398 MWSFPVKGERDS-YM-SMLESLCGAGKTIEAI-EMLSKIHEKGVVTDTMMYNTVFSALGK 454
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
Q++ + + KM+ G PD YN++I + G+V+ + E+ SD PD+I
Sbjct: 455 LKQISHIH-DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDII 513
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXX 260
+Y ++I L G ++A+ K+M+ G +P++V S + + ++
Sbjct: 514 SYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
Query: 261 XKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
G C+PN+VTY L+ + + EA+++ +M+ G + +T +T+++ L
Sbjct: 574 LVKG-CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSIT-YTVLERL 626
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 5/259 (1%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A V M+ R D Y ++IR + G + L EM +++ Y T+++
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
L + A + M GC PN S + + L G +
Sbjct: 314 VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM--- 370
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
Y+ L+++ + +EA + M +F + ++++SLC G EA +
Sbjct: 371 -TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 328 VDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+ K+ E GV Y+++ +L ++K++ LF ++ PD ++L+
Sbjct: 430 LSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGR 489
Query: 387 KDRVLDGFYLLDAMENMGC 405
V + + + +E C
Sbjct: 490 VGEVDEAINIFEELERSDC 508
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 148/351 (42%), Gaps = 11/351 (3%)
Query: 35 LYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWA-GFQSGYRHS 93
LY + + + + LS K +L + +QV + P + RFF+++ + H+
Sbjct: 53 LYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNF-PLSWRPVHRFFLYSQTHHPDFTHT 111
Query: 94 AYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLR 153
+ K +++G RN + +L + G +V FR VLK A+ +
Sbjct: 112 STTSNKMLAIIGNSRNMDLFWELAQEIGKRG-LVNDKTFRIVLKTLASARELKKCVNYFH 170
Query: 154 KMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAG 213
M FG + N + CK+ VE + + ++ PD ITY TMI+G C+ G
Sbjct: 171 LMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLK-EFIKPDEITYRTMIQGFCDVG 229
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGS--XXXXXXXXXXXXKSGDCRPNVV 271
+A L M G ++ I + L + + GD
Sbjct: 230 DLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGF- 288
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
Y +I C+ + + A V D MR G +++T +LI L K V EAY LV+ +
Sbjct: 289 -YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGV 347
Query: 332 VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
+S Y L+ L++IKR EA ++FR+++ +P +LL+
Sbjct: 348 ENPDIS---IYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQ 395
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 126/302 (41%), Gaps = 9/302 (2%)
Query: 89 GYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGC---VVTVNMFREVLKLCKEAQLA 145
G + Y + +++ D N + + D +E E EG +VT N V C+ +L
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL--VSSYCRRGRLK 288
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
+ A ++ + M PD V Y +I+ CK G V + M PD ++Y T+
Sbjct: 289 E-AFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I C G + + LL +M + P+ I +G R G +
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRM-RAFGCLANHVTAFTLIDSLCDKGCVEEA 324
P V LI S C+ + A ++LDR+ G A T LI+SL +EEA
Sbjct: 408 DIPFEVC-DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEA 466
Query: 325 YRLVDKLV-EHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
L KL ++ V Y +L+ L RI R EAE L E+ E+KPD+ L+
Sbjct: 467 LVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYG 526
Query: 384 LC 385
C
Sbjct: 527 YC 528
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 168/394 (42%), Gaps = 37/394 (9%)
Query: 11 PCLHKLKTLPFSSQKMGMASLADTLYSHLHQCNGSV-----ENSLSKIKPKLDSQCVIQV 65
P L+ L L SQ + + D + S L+ + SV + + + P L + +V
Sbjct: 28 PILNPLYNLLPQSQ--NPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRV 85
Query: 66 VSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMY-RKASSLLGIDRNP---QMICDLIESYE 121
+ R + FF W F G R + Y L+ + P Q +C+LIE
Sbjct: 86 LLRF-QSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTS 144
Query: 122 AEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVE 181
+ V++FR ++ E W D V+++++++ K G VE
Sbjct: 145 KKE---EVDVFRVLVSATDECN------W------------DPVVFDMLVKGYLKLGLVE 183
Query: 182 MGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIF 241
G ++ RE+ S ++T ++ GL ED + + M G PN + +
Sbjct: 184 EGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILT 243
Query: 242 DGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGC 301
+ C + + G P++VTY +L+ S+C R + EA + M
Sbjct: 244 NVFCNDSNFREVDDFLEKMEEEG-FEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRV 302
Query: 302 LANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC--YSSLVISLIRIKRLEEAE 359
+ + VT +LI LC G V EA++ ++V+ G+ DC Y++L+ + + +++++
Sbjct: 303 VPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK-PDCMSYNTLIYAYCKEGMMQQSK 361
Query: 360 KLFRELLAGELKPDTLASSLLLKELCMKDRVLDG 393
KL E+L + PD ++++ + R+L
Sbjct: 362 KLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 9/251 (3%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G P+T +N++ + C + + L +M PDL+TY T++ C GR ++A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
+ L K M P+LV +++ GLC+ G G +P+ ++Y +LI
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG-IKPDCMSYNTLIY 349
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL--VEHGV 336
++C+ ++ +L M + + T +++ +G + A V +L ++ +
Sbjct: 350 AYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDI 409
Query: 337 SYGDCYSSLVISLIRIKRLEEAEKLFRELL---AGELKPDTLASSLLLKELCMKDRVLDG 393
+ C L++SL + + A+ L ++ E KP+T + L++ L D + +
Sbjct: 410 PFEVC-DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNN--LIESLSRCDAIEEA 466
Query: 394 FYLLDAMENMG 404
L ++N
Sbjct: 467 LVLKGKLKNQN 477
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 139/338 (41%), Gaps = 46/338 (13%)
Query: 111 QMICDLIESYEAEGCVV-TVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
+ I LI + + G +V + R + LCK A+ A+ A +L + + + +N
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR-ANAAWDILSDLMKNKTPLEAPPFNA 299
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITY--------------------------- 202
++ + D+ L+ +M PD++T
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKR 359
Query: 203 --------------ITMIEGLCNAGRPEDAYSLLKDMRVHG-CSPNLVVLSAIFDGLCRS 247
T+I+GLC GR ++A LL M++ C+PN V + + DG CR+
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRA 419
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
G K + +PNVVT +++ C N A+ M G N VT
Sbjct: 420 GK-LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLFRELL 366
TLI + C VE+A +K++E G S Y +L+ L +++R +A ++ +L
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
G D LA ++L+ C K+ + +L ME G
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG 576
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L ME G +PD++ YN +I K D E E+++ +M P + TY +I+ C
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 211 NAGRPEDAYSLLKDMRVHG-CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPN 269
+ G ++A L KDM +H +PN V+ + + + + G+ K RPN
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN-FGQALSLKEEMKMKMVRPN 686
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
V TY +L + E++Q L ++D M C N +T L++ L
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 7/223 (3%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ V+ K+++ G D + YN++I L C K + E ++L +M PD ITY T+I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
E +++ MR G P + A+ D C G
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PN V Y LI +F + + +AL++ + M+ N T L L +K E +L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 328 VDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKL--FRELLAG 368
+D++VE C + + I ++RL +++L R+ + G
Sbjct: 710 MDEMVEQS-----CEPNQITMEILMERLSGSDELVKLRKFMQG 747
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 4/245 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
C+ +L + A V+ +M++ +P+ V N ++ C+ + M +M +
Sbjct: 417 CRAGKL-ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
++TY+T+I C+ E A + M GCSP+ + A+ GLC+
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV-RRDHDAIRVV 534
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
K G +++ Y LI FC+++ + +L M G + +T TLI
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 319 GCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFREL-LAGELKPDTLA 376
E R+++++ E G+ Y +++ + + L+EA KLF+++ L ++ P+T+
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 377 SSLLL 381
++L+
Sbjct: 655 YNILI 659
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 2/249 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK +L + ++R + P+ V YN +I C+ G +E ++++ M + P
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+++T T++ G+C A DM G N+V + C +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G C P+ Y +LI C+ + ++A+ V+++++ G + + LI CD
Sbjct: 500 EKMLEAG-CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
K E+ Y ++ + + G Y++L+ + K E E++ ++ L P
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 377 SSLLLKELC 385
++ C
Sbjct: 619 YGAVIDAYC 627
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 2/236 (0%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A+ +M G PD V +N +I CK G + E++ M P TY M
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIM 520
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I + R +D LL M+ G PN+V + + D +SG KS
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR-FNDAIECLEEMKSVG 579
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
+P+ Y +LI ++ +R +A+N M + G + + +LI++ + EA+
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 326 RLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLL 380
++ + E+GV Y++L+ +LIR+ + ++ ++ E++ KPD A S+L
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 159 GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA 218
G +P T YN +++ K G ++ E ++ EM PD TY +I+ NAGR E A
Sbjct: 334 GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 219 YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
+LK+M PN V S + G R KS +P+ Y +I
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGF-RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VS 337
+F + + + A+ DRM + G + VT TLID C G A + + + G +
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 338 YGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLL 397
Y+ ++ S +R ++ ++L ++ + + P+ + + L+ R D L
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 398 DAMENMG 404
+ M+++G
Sbjct: 573 EEMKSVG 579
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 128/327 (39%), Gaps = 39/327 (11%)
Query: 116 LIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
L E G + +LK K L D A ++ +ME G PD Y+++I
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKD-AESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRV------- 227
G E +L+EM D P+ + ++ G + G + + +LK+M+
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 228 ----------------------------HGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
G P+ V + + D C+ G
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
+ G C P TY +I S+ ++ +W++ +L +M++ G L N VT TL+D G
Sbjct: 505 MERRG-CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 563
Query: 320 CVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
+A ++++ G+ Y++L+ + + E+A FR + + LKP LA +
Sbjct: 564 RFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALN 623
Query: 379 LLLKELCMKDRVLDGFYLLDAMENMGC 405
L+ R + F +L M+ G
Sbjct: 624 SLINAFGEDRRDAEAFAVLQYMKENGV 650
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 2/244 (0%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
D + N +I K GD +LL + T +++I L ++GR +A +L
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+++R G P +A+ G ++G K G P+ TY+ LI ++
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAYVN 386
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY 342
+W A VL M A N L+ D+G ++ ++++ ++ GV +
Sbjct: 387 AGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 343 SSLVISLI-RIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
++VI + L+ A F +L+ ++PD + + L+ C R + + +AME
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 402 NMGC 405
GC
Sbjct: 507 RRGC 510
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 2/256 (0%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
VL++M+ G +PD YNVVI K ++ M PD +T+ T+I+ C
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
GR A + + M GC P + + + KS PNV
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG-DQERWDDMKRLLGKMKSQGILPNV 549
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
VT+T+L+ + + ++N+A+ L+ M++ G + LI++ +G E+A
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 331 LVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
+ G+ +SL+ + +R EA + + + +KPD + + L+K L D+
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Query: 390 VLDGFYLLDAMENMGC 405
+ + M GC
Sbjct: 670 FQKVPVVYEEMIMSGC 685
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 3/252 (1%)
Query: 85 GFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQL 144
G+QS + + + + + + ID M+ L + E + + V + +++ ++
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKID--SVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
AL +L + G T +I G E L E+ S P Y
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+++G G +DA S++ +M G SP+ S + D +G ++G
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR-WESARIVLKEMEAG 403
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
D +PN ++ L+ F +R +W + VL M++ G + +ID+ C++ A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 325 YRLVDKLVEHGV 336
D+++ G+
Sbjct: 464 MTTFDRMLSEGI 475
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 103/244 (42%), Gaps = 4/244 (1%)
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAY--SLL 222
+ YN +I C + D+E L+ +M D + Y +I+ L + + + L
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
K++ ++ +++ I G +SG +G T S+I + +
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATG-LSAKTATLVSIISALAD 316
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-C 341
+ EA + + +R G L+ G +++A +V ++ + GVS +
Sbjct: 317 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 342 YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
YS L+ + + R E A + +E+ AG+++P++ S LL + F +L M+
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 402 NMGC 405
++G
Sbjct: 437 SIGV 440
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 77/187 (41%), Gaps = 1/187 (0%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
++ E+ E GC+ + ++ + + D +L KM+ G P+ V + ++ +
Sbjct: 500 EMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVY 559
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
K G + L EM P Y +I G E A + + M G P+L
Sbjct: 560 GKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSL 619
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+ L+++ + ++G +P+VVTYT+L+++ ++ + V +
Sbjct: 620 LALNSLINAFGEDRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIRVDKFQKVPVVYE 678
Query: 295 RMRAFGC 301
M GC
Sbjct: 679 EMIMSGC 685
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L ME G +PD++ YN +I K D E E+++ +M P + TY +I+ C
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 211 NAGRPEDAYSLLKDMRVHG-CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPN 269
+ G ++A L KDM +H +PN V+ + + + + G+ K RPN
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN-FGQALSLKEEMKMKMVRPN 686
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
V TY +L + E++Q L ++D M C N +T L++ L
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 138/338 (40%), Gaps = 46/338 (13%)
Query: 111 QMICDLIESYEAEGCVV-TVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
+ I LI + + G +V + R + LCK A+ A+ A +L + + + +N
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR-ANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITY--------------------------- 202
++ + D+ L+ +M PD++T
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 203 --------------ITMIEGLCNAGRPEDAYSLLKDMRVHG-CSPNLVVLSAIFDGLCRS 247
T+I+GLC GR ++A LL M++ C PN V + + DG CR+
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
G K + +PNVVT +++ C N A+ M G N VT
Sbjct: 420 GK-LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLFRELL 366
TLI + C VE+A +K++E G S Y +L+ L +++R +A ++ +L
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
G D LA ++L+ C K+ + +L ME G
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 7/223 (3%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ V+ K+++ G D + YN++I L C K + E ++L +M PD ITY T+I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
E +++ MR G P + A+ D C G
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PN V Y LI +F + + +AL++ + M+ N T L L +K E +L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 328 VDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKL--FRELLAG 368
+D++VE C + + I ++RL +++L R+ + G
Sbjct: 710 MDEMVEQS-----CEPNQITMEILMERLSGSDELVKLRKFMQG 747
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 4/245 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
C+ +L + A V+ +M++ +P+ V N ++ C+ + M +M +
Sbjct: 417 CRAGKL-ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
++TY+T+I C+ E A + M GCSP+ + A+ GLC+
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV-RRDHDAIRVV 534
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
K G +++ Y LI FC+++ + +L M G + +T TLI
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 319 GCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFREL-LAGELKPDTLA 376
E R+++++ E G+ Y +++ + + L+EA KLF+++ L ++ P+T+
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 377 SSLLL 381
++L+
Sbjct: 655 YNILI 659
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 2/249 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK +L + ++R + P+ V YN +I C+ G +E ++++ M + P
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+++T T++ G+C A DM G N+V + C +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G C P+ Y +LI C+ + ++A+ V+++++ G + + LI CD
Sbjct: 500 EKMLEAG-CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
K E+ Y ++ + + G Y++L+ + K E E++ ++ L P
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 377 SSLLLKELC 385
++ C
Sbjct: 619 YGAVIDAYC 627
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 131/319 (41%), Gaps = 3/319 (0%)
Query: 89 GYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQL-ADV 147
G S + Y + G + + +L++ + E ++ + V+ C L +
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
L + +M G +PD V YN ++ C +G + E + R M+ PDL TY ++E
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
R E LL +M G P++ + + + +SGS +G C
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-CT 349
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PN TY+ L+ F + ++++ + M++ + T LI+ + G +E L
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 328 VDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+VE + + Y ++ + + E+A K+ + + A ++ P + A + +++
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 387 KDRVLDGFYLLDAMENMGC 405
+ + M +G
Sbjct: 470 AALYEEALVAFNTMHEVGS 488
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 135/336 (40%), Gaps = 10/336 (2%)
Query: 44 GSVENSLSKIKPKLDSQCVIQVVSRCCPK-QCQLGVRFFIWAGFQSGYRHSAYMYRKASS 102
GS+ L K KL V + Q +R F + Q + + ++Y S
Sbjct: 90 GSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIS 149
Query: 103 LLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRP 162
LLG + ++ + ++G +V + ++ + +L +L +M++ P
Sbjct: 150 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISP 209
Query: 163 DTVMYNVVIRLCCKKG-DVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
+ YN VI C + G D E L EM PD++TY T++ G ++A +
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 269
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+ M G P+L S + + + SG P++ +Y L++++
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKL-RRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA 328
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD- 340
+ EA+ V +M+A GC N T L++ G ++ +L +E S D
Sbjct: 329 KSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL---FLEMKSSNTDP 385
Query: 341 ---CYSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
Y+ L+ +E LF +++ ++PD
Sbjct: 386 DAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 37/254 (14%)
Query: 121 EAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDV 180
+A GC N + +L L ++ D + +M+ + PD YN++I + + G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
+ L +M + PD+ TY +I G EDA +L+ M +
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN------------ 451
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
D P+ YT +I++F + + + EAL + M G
Sbjct: 452 ------------------------DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAE 359
+ T +L+ S G V+E+ ++ +LV+ G+ D +++ + + + + EEA
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Query: 360 KLFRELLAGELKPD 373
K + ++ PD
Sbjct: 548 KTYVDMEKSRCDPD 561
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 6/243 (2%)
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDAC-PDLITYITMIEGLCNAGRPEDAYSLLKDM 225
+ +V + +GD + +L + M C P+ Y MI L G + + +M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 226 RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS- 284
G S ++ +A+ + R+G K+ P+++TY ++I + C R
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNG-RYETSLELLDRMKNEKISPSILTYNTVINA-CARGG 225
Query: 285 -QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCY 342
W L + MR G + VT TL+ + +G +EA + + + G+ Y
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
S LV + +++RLE+ L E+ +G PD + ++LL+ + + + M+
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 403 MGC 405
GC
Sbjct: 346 AGC 348
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 13/265 (4%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+++ A V + + V++ +A L + AL M + GS P ++ ++
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
+ G V+ E +L + S + T+ IE G+ E+A DM C P+
Sbjct: 504 RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 563
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
L A+ + K+ D P+++ Y ++ + + +W++ +L+
Sbjct: 564 TLEAVLS-VYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622
Query: 296 MRAFGCLANHVTAFTLIDSLCDKGCVEE--AYRLV----DKLVEHGVSYG-DCYSSLVIS 348
M L+N V+ + KG ++ +++V DKL G G Y++L+ +
Sbjct: 623 M-----LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDA 677
Query: 349 LIRIKRLEEAEKLFRELLAGELKPD 373
L + + E A ++ E L P+
Sbjct: 678 LWWLGQKERAARVLNEATKRGLFPE 702
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
GC + F +L L A+L D + G D N++I+ C+ G++E
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
+LL E + P+++T+ +I G CN G+ E+A+ LL+ M P+ + + + G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
L + G G C PN TY ++ ++ + EA ++ +M ++G
Sbjct: 282 LRKKGRVEEGIDLLERMKVKG-CEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
+ ++ ++ LC+ V E ++ ++V HG
Sbjct: 341 SFLSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC---PDLITYITMIEGLCNAGRPED 217
+P +Y ++I + + E+++R + L C + + I G AGR
Sbjct: 92 QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNL-AGRINR 150
Query: 218 AYSLLKDMRVHGCSP---------NLVVLSAIFD-------------------------- 242
A +L M GC P NL+V + +FD
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 243 GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
GLC SG+ + RPNV+T++ LI+ FC + ++ EA +L+RM
Sbjct: 211 GLCESGNLEAALQLLDEFPQQ-KSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIE 269
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKL 361
+ +T LI L KG VEE L++++ G Y ++ L+ KR EA+++
Sbjct: 270 PDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEM 329
Query: 362 FRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++++ ++P L+ ++ LC V++ ++L M N G
Sbjct: 330 MSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGE 369
LI LC+ G +E A +L+D+ + +S L+ + EEA KL +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 370 LKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAE 429
++PDT+ ++L+ L K RV +G LL+ M+ GC GL K E
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC--EPNPGTYQEVLYGLLDKKRNLE 325
Query: 430 ATKLAKIMLKKSVLLRPPYQDSAIDILRKSEEKDLVDL 467
A ++ M+ S +RP + +L E K +V++
Sbjct: 326 AKEMMSQMI--SWGMRPSFLSYKKMVLGLCETKSVVEM 361
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 116/287 (40%), Gaps = 36/287 (12%)
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR 172
I LIES++ + + + +++ +A + + A+ +M+ +G+ V +N ++
Sbjct: 86 IETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLN 145
Query: 173 LCCKKGDVEMGEKLLREMS--LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
C + + +L E+ + PD I+Y +I+ C++G PE A +++ M+ G
Sbjct: 146 ACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGM 205
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG-------------------------- 264
+ + I L + G K G
Sbjct: 206 EVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKEL 265
Query: 265 -------DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+P+ ++Y L+ ++CER +EA V + + C N T TLI LC
Sbjct: 266 IEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCY 325
Query: 318 KGCVEEAYRLVDKLVE-HGVSYGDCYSSLVISLIRIKRLEEAEKLFR 363
E+ Y + K V H + + LV+ L+ K+ ++A+ L R
Sbjct: 326 SRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIR 372
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 111/266 (41%), Gaps = 9/266 (3%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYN---VVIRL--CCKKGDVEMGEKLLREMSLSDACPDLI 200
D AL + + D + P + Y V RL C + D+E L+ +
Sbjct: 47 DKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIET---LIESHKNDPKIKEEP 103
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXX-XXXX 259
Y T+I A A + M +G + V +A+ + S +
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
+ P+ ++Y LI+S+C+ +A+ ++ +M+ G + T++ SL KG
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 320 CVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSL 379
+E A L +++V+ G + ++ I + + E ++L E+ + LKPDT++ +
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 380 LLKELCMKDRVLDGFYLLDAMENMGC 405
L+ C + + + + + +E C
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNC 309
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 150/343 (43%), Gaps = 17/343 (4%)
Query: 72 KQCQLGVRFFIWAGFQSGYRHSAYMY-------RKASSLLGIDRNPQMICDLIESYEAEG 124
K+ + F WA Q Y S Y + +GI + ++++ + G
Sbjct: 183 KEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQ---SLFEEMVQDSSSHG 239
Query: 125 CVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGE 184
+ + N + +V++ +A+ +VA +K ++ G + DT YN ++ L KG
Sbjct: 240 DL-SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAF 298
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL 244
++ M +D+ D TY +I L +GR + A+ L + M+ P+ V S++ D +
Sbjct: 299 EIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSM 358
Query: 245 CRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLAN 304
++G G RP+ + SLI S+ + + + AL + D M+ G N
Sbjct: 359 GKAGRLDTSMKVYMEMQGFGH-RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Query: 305 HVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFR 363
+I+S G +E A + + + G + YS L+ +++ A K++
Sbjct: 418 FGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYN 477
Query: 364 ELLAGELKPDTLASSLLLKELCMKDRVLD--GFYLLDAMENMG 404
+ L+P L+S + L L R++D G LL+ M+ MG
Sbjct: 478 SMTNAGLRPG-LSSYISLLTLLANKRLVDVAGKILLE-MKAMG 518
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 131 MFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM 190
+F +L + + D A +L + + G PD V YN ++ + ++G+ E++L+ +
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Query: 191 SLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSX 250
S PDL++Y T+I+G C G ++A +L +M G P + + G G
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752
Query: 251 XXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAF 299
K+ DCRPN +T+ ++ +C +++EA++ + +++ F
Sbjct: 753 AEIEDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF 800
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 4/272 (1%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
VL C L A +++ G P TV YN ++++ K G +L+EM +
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME-EN 345
Query: 195 ACP-DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXX 253
+CP D +TY ++ AG ++A +++ M G PN + + + D ++G
Sbjct: 346 SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEA 405
Query: 254 XXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLID 313
++G C PN TY +++ ++S+ NE + +L M++ GC N T T++
Sbjct: 406 LKLFYSMKEAG-CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 314 SLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKP 372
+KG + R+ ++ G D +++L+ + R +A K++ E+
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 373 DTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ LL L K G ++ M++ G
Sbjct: 525 CVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 8/255 (3%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+ +L++ +A + AL VL++ME+ D+V YN ++ + G + ++ M+
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
P+ ITY T+I+ AG+ ++A L M+ GC PN +A+ L + S
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK-SRS 437
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALN-VLDRMRAFGCLANHVTAFT 310
KS C PN T+ +++ + C ++ +N V M++ G + T T
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC---YSSLVISLIRIKRLEEAEKLFRELLA 367
LI + G +A ++ ++ G + C Y++L+ +L R E + ++ +
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAG--FNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 368 GELKPDTLASSLLLK 382
KP + SL+L+
Sbjct: 555 KGFKPTETSYSLMLQ 569
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 16/239 (6%)
Query: 97 YRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKL----CKEAQLADVALWVL 152
Y K + LGI+R IE+ EG + M L L C+ ++ A +
Sbjct: 571 YAKGGNYLGIER--------IENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF 622
Query: 153 RKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA 212
+K G +PD V++N ++ + + + E +L + PDL+TY ++++
Sbjct: 623 KK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRR 679
Query: 213 GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVT 272
G A +LK + P+LV + + G CR G + G RP + T
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG-IRPCIFT 738
Query: 273 YTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
Y + + + + E +V++ M C N +T ++D C G EA V K+
Sbjct: 739 YNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 116/292 (39%), Gaps = 36/292 (12%)
Query: 150 WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGL 209
W++ + D + + +R+ ++ + KLL ++ L + D+ Y T++
Sbjct: 161 WLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAY 220
Query: 210 CNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR-- 267
G+ E A L + M+ G SP LV + I D + G +S +
Sbjct: 221 SRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFD 280
Query: 268 ---------------------------------PNVVTYTSLIQSFCERSQWNEALNVLD 294
P VTY +L+Q F + + EAL+VL
Sbjct: 281 EFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLK 340
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV-SYGDCYSSLVISLIRIK 353
M C A+ VT L+ + G +EA +++ + + GV Y++++ + +
Sbjct: 341 EMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAG 400
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
+ +EA KLF + P+T + +L L K R + +L M++ GC
Sbjct: 401 KEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 128/325 (39%), Gaps = 37/325 (11%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L S + GCV + VL L + ++ + +L M+ G P+ +N ++ LC
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCG 467
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
KG + ++ REM PD T+ T+I G DA + +M G + +
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT 527
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+A+ + L R G KS +P +Y+ ++Q + + + + +R
Sbjct: 528 TYNALLNALARKGD-WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 296 MRA-----------------FGC--LANHVTAFTLIDS----------------LCDKGC 320
++ F C LA AFTL
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646
Query: 321 VEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSL 379
++A +++ + E G+S Y+SL+ +R +AE++ + L +LKPD ++ +
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 706
Query: 380 LLKELCMKDRVLDGFYLLDAMENMG 404
++K C + + + +L M G
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERG 731
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/351 (17%), Positives = 122/351 (34%), Gaps = 86/351 (24%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPD------- 163
+M+CD+ ++ GC + +L LC + V R+M+ G PD
Sbjct: 442 KMLCDM----KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 164 ----------------------------TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDA 195
YN ++ +KGD GE ++ +M
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 196 CPDLITYITMIEGLCNAGR--------------------------------------PED 217
P +Y M++ G E
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 218 AYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
A++L K HG P++V+ +++ R+ + G P++VTY SL+
Sbjct: 618 AFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG-LSPDLVTYNSLM 673
Query: 278 QSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
+ R + +A +L + + V+ T+I C +G ++EA R++ ++ E G+
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIR 733
Query: 338 YGDC---YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
C Y++ V + E E + + + +P+ L +++ C
Sbjct: 734 --PCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYC 782
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 138/338 (40%), Gaps = 46/338 (13%)
Query: 111 QMICDLIESYEAEGCVV-TVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
+ I LI + + G +V + R + LCK A+ A+ A +L + + + +N
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR-ANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITY--------------------------- 202
++ + D+ L+ +M PD++T
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 203 --------------ITMIEGLCNAGRPEDAYSLLKDMRVHG-CSPNLVVLSAIFDGLCRS 247
T+I+GLC GR ++A LL M++ C PN V + + DG CR+
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
G K + +PNVVT +++ C N A+ M G N VT
Sbjct: 420 GK-LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLFRELL 366
TLI + C VE+A +K++E G S Y +L+ L +++R +A ++ +L
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
G D LA ++L+ C K+ + +L ME G
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ V+ K+++ G D + YN++I L C K + E ++L +M PD ITY T+I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
E +++ MR G P + A+ D C G
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PN V Y LI +F + + +AL++ + M+ N T L L +K E +L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 328 VDKLVEHGVS 337
+D++VEH V+
Sbjct: 710 MDEMVEHLVN 719
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 4/245 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
C+ +L + A V+ +M++ +P+ V N ++ C+ + M +M +
Sbjct: 417 CRAGKL-ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
++TY+T+I C+ E A + M GCSP+ + A+ GLC+
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV-RRDHDAIRVV 534
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
K G +++ Y LI FC+++ + +L M G + +T TLI
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 319 GCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFREL-LAGELKPDTLA 376
E R+++++ E G+ Y +++ + + L+EA KLF+++ L ++ P+T+
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 377 SSLLL 381
++L+
Sbjct: 655 YNILI 659
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 2/249 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK +L + ++R + P+ V YN +I C+ G +E ++++ M + P
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+++T T++ G+C A DM G N+V + C +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
++G C P+ Y +LI C+ + ++A+ V+++++ G + + LI CD
Sbjct: 500 EKMLEAG-CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 318 KGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
K E+ Y ++ + + G Y++L+ + K E E++ ++ L P
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 377 SSLLLKELC 385
++ C
Sbjct: 619 YGAVIDAYC 627
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 7/331 (2%)
Query: 72 KQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNM 131
++ Q FF W +S + Y L R Q+I ++ +G +
Sbjct: 164 REWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNIT 223
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+ ++ K L + A+ +M G PD V Y+ ++ + K G VE L
Sbjct: 224 YSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAV 283
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
+ PD I + + + AG + +L++M+ PN+VV + + + + R+G
Sbjct: 284 ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPG 343
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
++G PN T T+L++ + + +AL + + M+A + + TL
Sbjct: 344 LARSLFNEMLEAG-LTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTL 402
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRI----KRLEEAEKLFRELLA 367
++ D G EEA RL + + E D +S +++ I + E+A +LF E+L
Sbjct: 403 LNMCADIGLEEEAERLFNDMKESVQCRPDNFS--YTAMLNIYGSGGKAEKAMELFEEMLK 460
Query: 368 GELKPDTLASSLLLKELCMKDRVLDGFYLLD 398
++ + + + L++ L R+ D Y+ D
Sbjct: 461 AGVQVNVMGCTCLVQCLGKAKRIDDVVYVFD 491
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 3/203 (1%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
VL M + G PD V ++ +R C+ G V+ + L++E++ + PD TY +++ LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 211 NAGRPEDAYSLLKDMRVH-GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPN 269
Y + +MR P+LV + + D +C S + +G +P+
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG-FKPD 264
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD 329
Y ++++ FC S+ +EA+ V +M+ G + +T TLI L G VEEA +
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 330 KLVEHGVSYGDC-YSSLVISLIR 351
+V+ G Y+SL+ + R
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCR 347
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC--KKGDVEMGEKLLREMSLSDA 195
+C L + A++++ K+ + G +PD +YN +++ C KG +G + ++M
Sbjct: 240 VCNSKNLRE-AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG--VYKKMKEEGV 296
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG 248
PD ITY T+I GL AGR E+A LK M G P+ +++ +G+CR G
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLS- 193
V LC+ ++ D A +++++ + S PDT YN +++ CK D+ + + + EM
Sbjct: 166 VRSLCETGRV-DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 194 DACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXX 253
D PDL+++ +I+ +CN+ +A L+ + G P+ + + I G C + S
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC-TLSKGSE 283
Query: 254 XXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLID 313
K P+ +TY +LI + + EA L M G + T +L++
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 314 SLCDKG 319
+C KG
Sbjct: 344 GMCRKG 349
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
V KLC+ + D + L + G V I K V+ G +L R++ +
Sbjct: 551 VKKLCENGRAVDACKY-LDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
CPD+I Y +I+ LC A R +A L +M G P + +++ DG C+ G
Sbjct: 610 HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGL 669
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
+ + P+V+TYTSLI C + +EA+ + M+ C N +T LI
Sbjct: 670 SCIVRMYED-EKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 315 LCDKGCVEEA 324
LC G EA
Sbjct: 729 LCKCGWSGEA 738
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 7/287 (2%)
Query: 53 IKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQM 112
+ P+L+++ V V++ K+ L FF WA Q GYR+ Y Y +S+L R
Sbjct: 67 LSPELNTKVVETVLNGF--KRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNAS 124
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFG-SRPDTVMYNVVI 171
+ L+ C ++ F ++ A L D A V ++ + G P+ YN ++
Sbjct: 125 LKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLL 184
Query: 172 RLCCKKG--DVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG 229
K VE+ E L+EM D T +++ CN G+ E A S+ ++ G
Sbjct: 185 EAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRG 244
Query: 230 CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEA 289
+ + + C+ G + D R N TY LI F + S+ ++A
Sbjct: 245 WLDEHIS-TILVVSFCKWGQVDKAFELIEMLEER-DIRLNYKTYCVLIHGFVKESRIDKA 302
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
+ ++MR G A+ LI LC +E A L ++ G+
Sbjct: 303 FQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGI 349
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
G+DR ++ D+ + + + + + K C+ + AD+ + +M G +P
Sbjct: 594 GVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME-ADI---LFNEMVSKGLKPTV 649
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
YN +I CK+G+++ G + M + PD+ITY ++I GLC +GRP +A +
Sbjct: 650 ATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNE 709
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSG 248
M+ C PN + A+ GLC+ G
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCG 733
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 118/288 (40%), Gaps = 31/288 (10%)
Query: 111 QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
I +L+ +YE++G E++KL K+ A + PD+ ++V
Sbjct: 407 SFIQNLMGNYESDGV-------SEIVKLLKDHNKAIL--------------PDSDSLSIV 445
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
I K V+M LL ++ + P + Y +IEG+C GR E++ LL +M+ G
Sbjct: 446 INCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGV 505
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
P+ L+ I+ L G P + T L++ CE + +A
Sbjct: 506 EPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYG-FEPWIKHTTFLVKKLCENGRAVDAC 564
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-----YSSL 345
LD + G L + V + ID L V+ L + + G C Y L
Sbjct: 565 KYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICAN----GHCPDVIAYHVL 620
Query: 346 VISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDG 393
+ +L + R EA+ LF E+++ LKP + ++ C + + G
Sbjct: 621 IKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 20/248 (8%)
Query: 59 SQCVIQVVSRCCPKQCQL--------GVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNP 110
SQ + + C ++C +RF+ GF+ +H+ ++ +K + N
Sbjct: 508 SQFTLNCIYGCLAERCDFVGALDLLKKMRFY---GFEPWIKHTTFLVKK------LCENG 558
Query: 111 QMI--CDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYN 168
+ + C ++ EG + + + + + D L + R + G PD + Y+
Sbjct: 559 RAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYH 618
Query: 169 VVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH 228
V+I+ CK + L EM P + TY +MI+G C G + S + M
Sbjct: 619 VLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYED 678
Query: 229 GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNE 288
+P+++ +++ GLC SG K DC PN +T+ +LIQ C+ E
Sbjct: 679 EKNPDVITYTSLIHGLCASGRPSEAIFRWNEM-KGKDCYPNRITFMALIQGLCKCGWSGE 737
Query: 289 ALNVLDRM 296
AL M
Sbjct: 738 ALVYFREM 745
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 18/259 (6%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
D + +++ CK G V+ +L+ + D + TY +I G R + A+ L
Sbjct: 247 DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLF 306
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+ MR G + ++ + + GLC+ +SG P+ L+ SF E
Sbjct: 307 EKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG-IPPDRGILGKLLCSFSE 365
Query: 283 RSQWNEALNV----LDRMRAF--------GCLANHVT--AFTLIDSLCDKGCVEEAYRLV 328
S+ + V +D+ G + N + A++ I +L + +V
Sbjct: 366 ESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIV 425
Query: 329 DKLVEHGVSY---GDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
L +H + D S ++ L++ +++ A L +++ L P + + +++ +C
Sbjct: 426 KLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMC 485
Query: 386 MKDRVLDGFYLLDAMENMG 404
+ R + LL M++ G
Sbjct: 486 KEGRSEESLKLLGEMKDAG 504
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 2/244 (0%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
+ A V +M + +P V YN +I C+ D+ + LL +M P+ +T+ +
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
++GLC G +A L+ DM GC P LV + L + G K
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKR-R 321
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
+P+VV Y L+ C + EA VL M+ GC N T +ID C +
Sbjct: 322 IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGL 381
Query: 326 RLVDK-LVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
+++ L + +V LI+ L+ A + + L + A LL +L
Sbjct: 382 NVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDL 441
Query: 385 CMKD 388
C+KD
Sbjct: 442 CIKD 445
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 2/259 (0%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
D+ + CV T+ ++ + + + A +D RP++V +N++I+
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGF 196
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
K D E K+ EM + P ++TY ++I LC A SLL+DM PN
Sbjct: 197 LDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNA 256
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
V + GLC G G C+P +V Y L+ +R + +EA +L
Sbjct: 257 VTFGLLMKGLCCKGEYNEAKKLMFDMEYRG-CKPGLVNYGILMSDLGKRGRIDEAKLLLG 315
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS-YGDCYSSLVISLIRIK 353
M+ + V L++ LC + V EAYR++ ++ G Y ++ RI+
Sbjct: 316 EMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIE 375
Query: 354 RLEEAEKLFRELLAGELKP 372
+ + +LA P
Sbjct: 376 DFDSGLNVLNAMLASRHCP 394
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 128/301 (42%), Gaps = 8/301 (2%)
Query: 109 NPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYN 168
+P+ L Y+ G + ++ +++ D +LR + R ++
Sbjct: 61 DPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFM 120
Query: 169 VVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL---KDM 225
+I+ K G V+ + +++ D + + T+I L + G E A S KDM
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 226 RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQ 285
R+ PN V + + G + + +P+VVTY SLI C
Sbjct: 181 RLR---PNSVSFNILIKGFLDKCDWEAACKVFDEMLEM-EVQPSVVTYNSLIGFLCRNDD 236
Query: 286 WNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSS 344
+A ++L+ M N VT L+ LC KG EA +L+ + G G Y
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 345 LVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L+ L + R++EA+ L E+ +KPD + ++L+ LC + RV + + +L M+ G
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Query: 405 C 405
C
Sbjct: 357 C 357
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 148/379 (39%), Gaps = 42/379 (11%)
Query: 47 ENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRK-ASSL-- 103
E SL+ ++ + S+ V +V+ R + +RFF WA Y ++ Y + A SL
Sbjct: 65 ERSLNSLRLPVTSEFVFRVL-RATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLAS 123
Query: 104 ----------------LGIDRNPQMICDLIESYEAEGCV-VTVNMFREVLKLCKEAQLAD 146
L +D + + +C +IE Y G V V +F V K Q D
Sbjct: 124 HKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVD 183
Query: 147 VALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
V YN ++ C L+R M PD TY ++
Sbjct: 184 V-------------------YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILV 224
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
G C+AG+ ++A L +M G +P + +GL +G K G
Sbjct: 225 NGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFV 284
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYR 326
P++ T+ LI++ + + + + G + T TLI ++ G ++EA+R
Sbjct: 285 -PDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFR 343
Query: 327 LVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
L++ VE G + Y+ ++ + R ++A F ++ P+ ++L+
Sbjct: 344 LLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCG 403
Query: 386 MKDRVLDGFYLLDAMENMG 404
+ +D L M MG
Sbjct: 404 RGGKFVDAANYLVEMTEMG 422
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 4/250 (1%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A V R+M + G PD YN +I K + +L EM S PD+ +Y T+
Sbjct: 65 DEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 206 IEGLCNAGRPEDAYSLL-KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+ GR +A+ +L +D+ + G P + + + D LC+SG
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR- 183
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
+P ++TY LI C+ + ++ ++ G N VT T++ +E+
Sbjct: 184 -VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 325 YRLVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
+L K+ + G ++ G ++V +LI+ R EEA + EL+ + + S L
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 384 LCMKDRVLDG 393
L KD LD
Sbjct: 303 LYFKDGNLDA 312
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 2/242 (0%)
Query: 164 TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLK 223
T + N+ + CK ++E E LL + PD+ITY T+I+G ++AY++ +
Sbjct: 13 TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 224 DMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER 283
MR G P++ +++ G ++ SG P++ +Y +L+ + +
Sbjct: 73 RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSG-LSPDMWSYNTLMSCYFKL 131
Query: 284 SQWNEALNVL-DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY 342
+ EA +L + + G + T L+D+LC G + A L L Y
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTY 191
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
+ L+ L + +R+ + + REL P+ + + +LK R+ G L M+
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 403 MG 404
G
Sbjct: 252 EG 253
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 131/302 (43%), Gaps = 10/302 (3%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDT 164
+ R+ + L E G V ++ + +L LCK D A+ + + ++ +P+
Sbjct: 131 LGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGH-TDNAIELFKHLKS-RVKPEL 188
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
+ YN++I CK V + ++RE+ S P+ +TY TM++ R E L
Sbjct: 189 MTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK 248
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M+ G + + A+ L ++G +SG ++V+Y +L+ + +
Sbjct: 249 MKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDG 308
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV--SYGDCY 342
+ ++L+ + G + T +++ L + G A + + + E G+ S C
Sbjct: 309 NLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTC- 367
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
+ L+ L + ++ A +LF + E++ D + ++ LC R++ LL + N
Sbjct: 368 NCLIDGLCKAGHVDRAMRLFASM---EVR-DEFTYTSVVHNLCKDGRLVCASKLLLSCYN 423
Query: 403 MG 404
G
Sbjct: 424 KG 425
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 24/262 (9%)
Query: 25 KMGMASLADTLYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWA 84
K G A L+ HL S++KP+L + ++ ++ C + V + +
Sbjct: 166 KSGHTDNAIELFKHLK----------SRVKPELMTYNIL--INGLCKSRRVGSVDWMMRE 213
Query: 85 GFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFRE---VLKLCKE 141
+SGY +A Y + + + L + EG T + F V L K
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG--YTFDGFANCAVVSALIKT 271
Query: 142 AQLADVALWVLRKMEDFGSRP-DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLI 200
+ A+ A + ++ G+R D V YN ++ L K G+++ + LL E+ + PD
Sbjct: 272 GR-AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDY 330
Query: 201 TYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXX 260
T+ ++ GL N G A L + G P++V + + DGLC++G
Sbjct: 331 THTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFA-- 388
Query: 261 XKSGDCRPNVVTYTSLIQSFCE 282
S + R + TYTS++ + C+
Sbjct: 389 --SMEVR-DEFTYTSVVHNLCK 407
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 135/303 (44%), Gaps = 4/303 (1%)
Query: 75 QLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFRE 134
Q ++ F Q Y Y K +LG + P L E +EG T++++
Sbjct: 125 QSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTS 184
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGS-RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLS 193
++ + +++L D A L M+ +PD + V+I CCK G ++ + ++ EMS
Sbjct: 185 LISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYL 244
Query: 194 DACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCS-PNLVVLSAIFDGLCRSGSXXX 252
+TY T+I+G AG E+ S+L DM G S P++ L++I G +G
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSII-GSYGNGRNMR 303
Query: 253 XXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLI 312
+ +P++ T+ LI SF + + + +V+D M VT +I
Sbjct: 304 KMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVI 363
Query: 313 DSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELK 371
++ G +E+ + K+ GV Y SLV + + + + + + R+++ ++
Sbjct: 364 ETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVV 423
Query: 372 PDT 374
DT
Sbjct: 424 LDT 426
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 6/254 (2%)
Query: 125 CVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGE 184
C +F+ VL CK+ D A + M G +P +Y +I + K ++
Sbjct: 144 CKTYTKLFK-VLGNCKQP---DQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAF 199
Query: 185 KLLREM-SLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
L M S+SD PD+ T+ +I C GR + S++ +M G + V + I DG
Sbjct: 200 STLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDG 259
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
++G + GD P+V T S+I S+ + + R + G
Sbjct: 260 YGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQP 319
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLI-RIKRLEEAEKLF 362
+ T LI S G ++ ++D + + S ++VI + R+E+ + +F
Sbjct: 320 DITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVF 379
Query: 363 RELLAGELKPDTLA 376
R++ +KP+++
Sbjct: 380 RKMKYQGVKPNSIT 393
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 131/304 (43%), Gaps = 11/304 (3%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLAD 146
++G+R S Y + + + + I ++ E G + F V+ E+ +
Sbjct: 73 ETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNME 132
Query: 147 VALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLR---EMSLSDACPDLITYI 203
A+ L KM++ G P T YN +I+ G E +LL E D P++ T+
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 204 TMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG-SXXXXXXXXXXXXK 262
+++ C + E+A+ ++K M G P+ V + I + G +
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC---DKG 319
+PN T ++ +C + + L + RM+ AN V +LI+ D+
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 320 CVEEAYRLVDKL-VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASS 378
++E L+ + V+ V YS+++ + +E+A ++F+E++ +KPD A S
Sbjct: 313 GIDEVLTLMKECNVKADVI---TYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 379 LLLK 382
+L K
Sbjct: 370 ILAK 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
C+E ++ D L +R+M++ + V++N +I + D + +++L M + D
Sbjct: 271 CREGRVRD-GLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKAD 329
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
+ITY T++ +AG E A + K+M G P+ S + G R+
Sbjct: 330 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 389
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLI 312
+ RPNVV +T++I +C ++A+ V ++M FG N T TL+
Sbjct: 390 TLIV--ESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
R T + NV+I ++G + + + ++ + P LI+Y T++ + + S
Sbjct: 46 RSRTKLMNVLI----ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS 101
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
++ ++ G + + +A+ + SG+ + G P TY +LI+ +
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELG-LNPTTSTYNTLIKGY 160
Query: 281 CERSQWNEALNVLDRMRAFGCL---ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
+ + +LD M G + N T L+ + C K VEEA+ +V K+ E GV
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 338 YGDCYSSLVISLIRIKRLE----EAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDG 393
D + I+ +++ E E+E + + ++ + KP+ +++ C + RV DG
Sbjct: 221 -PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDG 279
Query: 394 FYLLDAMENM 403
+ M+ M
Sbjct: 280 LRFVRRMKEM 289
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 3/284 (1%)
Query: 110 PQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
P L + GC + F +L + +++ + A + R + S DTV YNV
Sbjct: 142 PDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS-VDTVTYNV 200
Query: 170 VIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG 229
++ C ++L+EM P+L TY TM++G AG+ A+ +M+
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 230 CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEA 289
C ++V + + G +G + G P+V TY ++IQ C++ A
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG-VLPSVATYNAMIQVLCKKDNVENA 319
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVIS 348
+ + + M G N T LI L G L+ ++ G Y+ ++
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRY 379
Query: 349 LIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLD 392
+E+A LF ++ +G+ P+ ++L+ + ++ R D
Sbjct: 380 YSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 13/244 (5%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL VL++M + G P+ YN +++ + G + + EM D D++TY T++
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G AG + A ++ +M G P++ +A+ LC+ + + G
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG-YE 332
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PNV TY LI+ +++ ++ RM GC N T +I + VE+A L
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Query: 328 VDKLVEHGVSYGDC------YSSLVISLIRIKRLEEAEKLFRELLAGE-LKPDTLASSLL 380
+K+ GDC Y+ L+ + KR E+ + A E L+ + + S L
Sbjct: 393 FEKM-----GSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSGSRL 447
Query: 381 LKEL 384
L++
Sbjct: 448 LRKF 451
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 4/260 (1%)
Query: 148 ALW-VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
+W ++ +M P + +V G + KL M DL ++ T++
Sbjct: 109 TVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTIL 168
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
+ LC + R E AY L + +R S + V + I +G C + G
Sbjct: 169 DVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG-I 226
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYR 326
PN+ TY ++++ F Q A M+ C + VT T++ G ++ A
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARN 286
Query: 327 LVDKLVEHGV-SYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
+ D+++ GV Y++++ L + +E A +F E++ +P+ ++L++ L
Sbjct: 287 VFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 386 MKDRVLDGFYLLDAMENMGC 405
G L+ MEN GC
Sbjct: 347 HAGEFSRGEELMQRMENEGC 366
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 2/209 (0%)
Query: 180 VEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSA 239
+E ++LL E + A P L +Y M L G+ + +L MR G P + A
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 240 IFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM-RA 298
LCR+G G C P V Y LI+ C+ + EA+ L +M +
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 299 FGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK-LVEHGVSYGDCYSSLVISLIRIKRLEE 357
C+AN T TL+D LC G EA +++++ L++ + Y ++ L + R E
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE 458
Query: 358 AEKLFRELLAGELKPDTLASSLLLKELCM 386
A E+++ ++ P++ L + +C
Sbjct: 459 AVMWLEEMVSQDMVPESSVWKALAESVCF 487
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 120/291 (41%), Gaps = 28/291 (9%)
Query: 168 NVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA----YSLLK 223
N+++++ C+ ++ ++ +EM+ PD +Y +++G C G+ E+A YS+
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 224 DMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER 283
+ G ++VV + D LC +G + G P + E
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYH------HIEA 269
Query: 284 SQWNEALNVLDRMR----------AFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
W + ++R++ A CL ++ T L ++G + E ++ +
Sbjct: 270 GHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMAT---DLFEEGKLVEGEEVLLAMRS 326
Query: 334 HGVSYGD-CYSSLVISLIRIKRLEEAEKLF-RELLAGELKPDTLASSLLLKELCMKDRVL 391
G Y + V +L R +L+EA + +E++ G P ++L+K LC + +
Sbjct: 327 KGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSM 386
Query: 392 DGF-YLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKS 441
+ YL + + C GLC+ EA+++ + ML KS
Sbjct: 387 EAVGYLKKMSKQVSC--VANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/363 (18%), Positives = 140/363 (38%), Gaps = 18/363 (4%)
Query: 90 YRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVAL 149
Y H+ +Y +LG + +IE + + C ++F V++ A + A+
Sbjct: 42 YGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAI 101
Query: 150 WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI-EG 208
+ + + +F ++ ++ +++ K+ ++E + R+ IT + ++ +
Sbjct: 102 SLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKV 161
Query: 209 LCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX------XXXXXK 262
LC R + A + ++M GC P+ + G C G
Sbjct: 162 LCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKG 221
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA-----NHVTAFTLIDSLCD 317
SG+ ++V Y L+ + C+ + ++A+ +L ++ G A +H+ A S
Sbjct: 222 SGE---DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS--S 276
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
+G L + L+ + D YS++ L +L E E++ + + +P
Sbjct: 277 EGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIY 336
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIM 437
+K LC ++ + +++ E M GLC EA K M
Sbjct: 337 GAKVKALCRAGKLKEAVSVINK-EMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 438 LKK 440
K+
Sbjct: 396 SKQ 398
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 2/209 (0%)
Query: 180 VEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSA 239
+E ++LL E + A P L +Y M L G+ + +L MR G P + A
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 240 IFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM-RA 298
LCR+G G C P V Y LI+ C+ + EA+ L +M +
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 299 FGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK-LVEHGVSYGDCYSSLVISLIRIKRLEE 357
C+AN T TL+D LC G EA +++++ L++ + Y ++ L + R E
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE 458
Query: 358 AEKLFRELLAGELKPDTLASSLLLKELCM 386
A E+++ ++ P++ L + +C
Sbjct: 459 AVMWLEEMVSQDMVPESSVWKALAESVCF 487
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 120/291 (41%), Gaps = 28/291 (9%)
Query: 168 NVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDA----YSLLK 223
N+++++ C+ ++ ++ +EM+ PD +Y +++G C G+ E+A YS+
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 224 DMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER 283
+ G ++VV + D LC +G + G P + E
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYH------HIEA 269
Query: 284 SQWNEALNVLDRMR----------AFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
W + ++R++ A CL ++ T L ++G + E ++ +
Sbjct: 270 GHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMAT---DLFEEGKLVEGEEVLLAMRS 326
Query: 334 HGVSYGD-CYSSLVISLIRIKRLEEAEKLF-RELLAGELKPDTLASSLLLKELCMKDRVL 391
G Y + V +L R +L+EA + +E++ G P ++L+K LC + +
Sbjct: 327 KGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSM 386
Query: 392 DGF-YLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKS 441
+ YL + + C GLC+ EA+++ + ML KS
Sbjct: 387 EAVGYLKKMSKQVSC--VANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/363 (18%), Positives = 140/363 (38%), Gaps = 18/363 (4%)
Query: 90 YRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVAL 149
Y H+ +Y +LG + +IE + + C ++F V++ A + A+
Sbjct: 42 YGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAI 101
Query: 150 WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI-EG 208
+ + + +F ++ ++ +++ K+ ++E + R+ IT + ++ +
Sbjct: 102 SLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKV 161
Query: 209 LCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX------XXXXXK 262
LC R + A + ++M GC P+ + G C G
Sbjct: 162 LCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKG 221
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA-----NHVTAFTLIDSLCD 317
SG+ ++V Y L+ + C+ + ++A+ +L ++ G A +H+ A S
Sbjct: 222 SGE---DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS--S 276
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLAS 377
+G L + L+ + D YS++ L +L E E++ + + +P
Sbjct: 277 EGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIY 336
Query: 378 SLLLKELCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIM 437
+K LC ++ + +++ E M GLC EA K M
Sbjct: 337 GAKVKALCRAGKLKEAVSVINK-EMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 438 LKK 440
K+
Sbjct: 396 SKQ 398
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 150/362 (41%), Gaps = 25/362 (6%)
Query: 49 SLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDR 108
S S I P D ++Q ++ P+ + + F W S + H+ G +
Sbjct: 101 SFSHITPNPD--LILQTLN-LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRK 157
Query: 109 NPQMICDLIESYEA-EGCVVTVNMFREVLKLCKEAQLADVALWVLRKME-DFGSRPDTVM 166
+ + + ++I Y+ G + +++ + Q+ D KME D+G + D
Sbjct: 158 DFKGMLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDF----FEKMENDYGLKRDKES 213
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
+V++ C+KG + EK+++ + ++ PD +I G C A + ++A L +M
Sbjct: 214 LTLVVKKLCEKGHASIAEKMVKNTA-NEIFPDENICDLLISGWCIAEKLDEATRLAGEMS 272
Query: 227 VHGCSPNLVVLSAIFD---GLCRSGSXXXXXXXXXXXXKSGDCRP---NVVTYTSLIQSF 280
G + + D LCR + R N T+ LI +
Sbjct: 273 RGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNL 332
Query: 281 CERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD 340
C+ + EA+ + RM +GC + T LI SL + E ++DK+ G YG+
Sbjct: 333 CKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAG--YGE 390
Query: 341 C-----YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVL--DG 393
Y + L I+RLE A +F+ + A KP LL+ ++C +++ +G
Sbjct: 391 LLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANG 450
Query: 394 FY 395
Y
Sbjct: 451 LY 452
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 10/275 (3%)
Query: 105 GIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDT 164
GI ++ + C+L ES + G + ++++ A + L KM + G D
Sbjct: 516 GISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDC 575
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
+ Y VI K G + M E++ +EM + PD++ Y +I + G + A S ++
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR--PNVVTYTSLIQSFCE 282
M+ G N V+ +++ + G +S + P+V T +I + E
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSE 695
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC---DKGCVEEAYRLVDKLVEHGVSYG 339
RS +A + D M+ G FT LC G EEA ++ ++ E +
Sbjct: 696 RSMVRKAEAIFDSMKQRG----EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTD 751
Query: 340 DCYSSLVISLIRIK-RLEEAEKLFRELLAGELKPD 373
+ V+ L + R +EA + F+E+++ ++PD
Sbjct: 752 PLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPD 786
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 106/255 (41%), Gaps = 6/255 (2%)
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
++M+D G +PD V Y ++ + VE E L+ EM + D T +
Sbjct: 390 FKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVE 449
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVV 271
A E ++S K V G + + SA D G + + V+
Sbjct: 450 AEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEAERVFICCQEVN--KRTVI 506
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
Y +I+++ +A + + M ++G + T TL+ L + ++K+
Sbjct: 507 EYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKM 566
Query: 332 VEHGVSYGDC--YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
E G DC Y +++ S +++ +L AE++++E++ ++PD + +L+
Sbjct: 567 RETGY-VSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 390 VLDGFYLLDAMENMG 404
V ++AM+ G
Sbjct: 626 VQQAMSYVEAMKEAG 640
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 121/311 (38%), Gaps = 10/311 (3%)
Query: 77 GVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVL 136
V F W + Y + Y +LG + + L + +G + + ++
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 137 KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSL---- 192
+ + L AL L KM G +PD V +V+++ K + + E+ ++ S
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 193 --SDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSX 250
S C TY TMI+ +G+ ++A K M G P V + + +G
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL 349
Query: 251 XXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT 310
C P+ TY LI + + A M+ G + V+ T
Sbjct: 350 GEVTSLMKTMKLH--CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFREL-LAG 368
L+ + + VEEA L+ ++ + V + S+L + + LE++ F+ +AG
Sbjct: 408 LLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG 467
Query: 369 ELKPDTLASSL 379
+ + ++++
Sbjct: 468 NMSSEGYSANI 478
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKM-EDFGSRPDTVMYNVVIRLCCKKGDVEM 182
C TV F +L ++ D A+ +++ E G PD V YN +I+ C+KG ++
Sbjct: 152 NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD 211
Query: 183 GEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD 242
+ E+ + PDLI++ T++E + + M+ SPN+ ++
Sbjct: 212 ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVR 271
Query: 243 GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
GL R+ G P+V TY +LI ++ + E + + M+ G
Sbjct: 272 GLTRNKKFTDALNLIDVMKTEG-ISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKL 361
+ VT LI LC KG ++ A + ++ ++H +S + Y +V L+ +++EA +L
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Query: 362 FR 363
+
Sbjct: 391 VK 392
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 15/269 (5%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR---LCCKKGDVEMGEKLLR 188
F L+ K+ D L +K +D S + VIR L G E KL
Sbjct: 93 FIRRLREAKKFSTIDEVLQYQKKFDDIKSE------DFVIRIMLLYGYSGMAEHAHKLFD 146
Query: 189 EMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH-GCSPNLVVLSAIFDGLCRS 247
EM + + ++ ++ N+ + ++A K++ G +P+LV + + LCR
Sbjct: 147 EMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRK 206
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
GS K+G P+++++ +L++ F R + E + D M++ N +
Sbjct: 207 GSMDDILSIFEELEKNG-FEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRS 265
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELL 366
+ + L +A L+D + G+S Y++L+ + LEE K + E+
Sbjct: 266 YNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMK 325
Query: 367 AGELKPDTLASSLLLKELCMK---DRVLD 392
L PDT+ +L+ LC K DR ++
Sbjct: 326 EKGLTPDTVTYCMLIPLLCKKGDLDRAVE 354
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 15/310 (4%)
Query: 49 SLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDR 108
++SK+ P+ + + ++ + L F WA Q + H Y A LG +
Sbjct: 129 TISKLPPRFTPEELADAIT--LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAK 186
Query: 109 NPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKM---EDFGSRPDTV 165
Q + D++ + + N++ ++ +A A+ + R M ++ RP
Sbjct: 187 MYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIR 246
Query: 166 MYNVVIRLCCKKGD--------VEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPED 217
Y+++ + +G+ +E L R+M S PD+ +++G + D
Sbjct: 247 TYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVND 306
Query: 218 AYSLLKDMRV-HGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
A + M V + C PN + GLC G G PN +Y SL
Sbjct: 307 ALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFV-PNGKSYNSL 365
Query: 277 IQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
+ +F + ++A+ L M G + + ++ TL+D C KG +EA RL++ L E +
Sbjct: 366 VNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Query: 337 SYGDCYSSLV 346
D Y LV
Sbjct: 426 VDRDSYDKLV 435
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 128/289 (44%), Gaps = 7/289 (2%)
Query: 104 LGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPD 163
GI Q + L E + G ++V+ + +K ++ AL + + + D ++ +
Sbjct: 108 FGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVGAKNVSK-ALEIYQSIPDESTKIN 165
Query: 164 TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA--GRPEDAYSL 221
+ N ++ K G ++ KL +M PD++TY T++ G G P+ A L
Sbjct: 166 VYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK-AIEL 224
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+ ++ +G + V+ + +C S K PN+ Y+SL+ S+
Sbjct: 225 IGELPHNGIQMDSVMYGTVL-AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYS 283
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC 341
+ + +A ++ M++ G + N V TL+ G + + L+ +L G + +
Sbjct: 284 WKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEM 343
Query: 342 -YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
Y L+ L + +LEEA +F ++ ++ D A+S+++ LC R
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKR 392
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ ++ ++ G + D+VMY V+ +C G E E +++M + P++ Y +++
Sbjct: 221 AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLN 280
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G + A L+ +M+ G PN V++
Sbjct: 281 SYSWKGDYKKADELMTEMKSIGLVPNKVMM------------------------------ 310
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
T+L++ + + ++ + +L + + G N + L+D L G +EEA +
Sbjct: 311 ------TTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364
Query: 328 VDKLVEHGV-SYGDCYSSLVISLIRIKRLEEAEKLFRE 364
D + GV S G S ++ +L R KR +EA++L R+
Sbjct: 365 FDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRD 402
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 132/331 (39%), Gaps = 17/331 (5%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCK----KGDVEMGEKLLREMSLSDACPDLITYITMI 206
+ R+M+ G P + Y ++++ + K E+ E LL E S PD Y MI
Sbjct: 203 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMI 261
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
AG E A + M G + V ++ L + + D
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQSTVT----YNSLMSFETSYKEVSKIYDQMQRSDI 317
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYR 326
+P+VV+Y LI+++ + EAL+V + M G H L+D+ G VE+A +
Sbjct: 318 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA-K 376
Query: 327 LVDKLVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
V K + + D Y++++ + + +E AEK F+ + +P+ + L+K
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436
Query: 385 CMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLL 444
+ V + + M G G C+ + A K M V
Sbjct: 437 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK--NFGSALGWYKEMESCGV-- 492
Query: 445 RPPYQDSAIDILRKSEEKDLVDLVNQLTGIR 475
PP Q + +L + +D ++ +LTGIR
Sbjct: 493 -PPDQKAKNVLLSLASTQDELEEAKELTGIR 522
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 5/261 (1%)
Query: 131 MFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM 190
M+ ++ + K+A + A V M G TV YN ++ +V K+ +M
Sbjct: 256 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQM 312
Query: 191 SLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSX 250
SD PD+++Y +I+ A R E+A S+ ++M G P + + D SG
Sbjct: 313 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG-M 371
Query: 251 XXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT 310
+ P++ +YT+++ ++ S A R++ G N VT T
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY-SSLVISLIRIKRLEEAEKLFRELLAGE 369
LI VE+ + +K+ G+ ++++ + R K A ++E+ +
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 491
Query: 370 LKPDTLASSLLLKELCMKDRV 390
+ PD A ++LL +D +
Sbjct: 492 VPPDQKAKNVLLSLASTQDEL 512
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 119/293 (40%), Gaps = 11/293 (3%)
Query: 114 CDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRL 173
C + GC++ N++ +V K+ K AL V R M++ G + + Y+++I
Sbjct: 478 CGFTPTVVTYGCLI--NLYTKVGKISK-------ALEVSRVMKEEGVKHNLKTYSMMING 528
Query: 174 CCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
K D + +M PD+I Y +I C G + A +K+M+ P
Sbjct: 529 FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 234 LVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVL 293
I G +SG + G C P V T+ LI E+ Q +A+ +L
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG-CVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRI 352
D M G AN T ++ G +A+ +L G+ Y +L+ + +
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
R++ A + +E+ A + ++ ++L+ + V + L+ M+ G
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 2/236 (0%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
GCV TV+ F ++ E + + A+ +L +M G + Y +++ GD
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
+ + D+ TY +++ C +GR + A ++ K+M N V + + DG
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 738
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
R G K G +P++ TYTS I + + N A ++ M A G
Sbjct: 739 WARRGDVWEAADLIQQMKKEG-VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP 797
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEA 358
N T TLI E+A +++ G+ Y L+ SL+ + EA
Sbjct: 798 NIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A ++++ G D Y +++ CCK G ++ + +EMS + + Y +I+
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILID 737
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G G +A L++ M+ G P++ ++ ++G G +
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG-VK 796
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
PN+ TYT+LI+ + S +AL+ + M+A G + L+ SL + + EAY
Sbjct: 797 PNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 2/238 (0%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A+ +++M+ RP T + +I K GD+ ++ M P + T+ +
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I GL + E A +L +M + G S N + I G G G
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG- 689
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
++ TY +L+++ C+ + AL V M A N LID +G V EA
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Query: 326 RLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
L+ ++ + GV Y+S + + + + A + E+ A +KP+ + L+K
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 91/227 (40%), Gaps = 2/227 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A V M G +PD ++YN +I C G+++ + ++EM P T++ +I
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G +G + + MR GC P + + + +GL +G
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG-VS 656
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
N TYT ++Q + +A R++ G + T L+ + C G ++ A +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 328 VDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
++ + Y+ L+ R + EA L +++ +KPD
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLAD 146
+SG SA K S I RN + LI+ + G V + AD
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV---------------WEAAD 750
Query: 147 VALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
+ +++M+ G +PD Y I C K GD+ + + EM P++ TY T+I
Sbjct: 751 L----IQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGS 249
+G A PE A S ++M+ G P+ V + L S
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 849
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 121/319 (37%), Gaps = 32/319 (10%)
Query: 37 SHLHQCNGSVENSLSKIKPKLDS-----QCVIQVVSRCC-PKQCQLG--VRFFIWAGFQS 88
S HQ SL +I LD+ Q VI + P + + G V+F+ +
Sbjct: 270 SSWHQEREGSRKSLQRI---LDTNGDNWQAVISAFEKISKPSRTEFGLMVKFY----GRR 322
Query: 89 GYRHSAYMYRKASSLLGIDRNPQMICDLIESY----------------EAEGCVVTVNMF 132
G H A + GI ++ LI +Y + EG +++ +
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 133 REVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSL 192
++ +A A+ A + + + + +Y +I C+ ++E E L+REM
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 193 SDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXX 252
+ Y TM++G + + K ++ G +P +V + + + G
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 253 XXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLI 312
+ G + N+ TY+ +I F + W A V + M G + + +I
Sbjct: 503 ALEVSRVMKEEG-VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 313 DSLCDKGCVEEAYRLVDKL 331
+ C G ++ A + V ++
Sbjct: 562 SAFCGMGNMDRAIQTVKEM 580
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 109/292 (37%), Gaps = 2/292 (0%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+ E A G T ++ ++ + D AL +RKM++ G V Y+V++
Sbjct: 330 ETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
K G E + E + Y +I C E A +L+++M G +
Sbjct: 390 SKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 449
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
+ + DG + G P VVTY LI + + + ++AL V
Sbjct: 450 AIYHTMMDGYTMVADEKKGLVVFKRLKECG-FTPTVVTYGCLINLYTKVGKISKALEVSR 508
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIK 353
M+ G N T +I+ A+ + + +V+ G+ Y++++ + +
Sbjct: 509 VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 354 RLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
++ A + +E+ +P T ++ + + D M GC
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 8/237 (3%)
Query: 146 DVALWVLRKMED----FGSR--PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDL 199
D AL + ++M++ +GS PD YN +I + C G + + E+ +S PD
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
TY +I+G C + R +DA + +M+ +G P+ +V + + DG ++
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
+ G R + TY LI + + ++ G + +T + LC +G
Sbjct: 385 MVQEG-VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443
Query: 320 CVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
+E A +LV+++ G S SSL+I + R + EKL + + G L P+ L
Sbjct: 444 KLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVL 500
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
TY S++ SF ++ + A VLD+M C A+ T +I L G + A ++D+L
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 332 VEHGVSYGDC--YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
+ G Y D Y++L+ +L + RL+EA +LF + + + PD ++ + +++ +
Sbjct: 692 TKQG-GYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 390 VLDGFYLLDAMENMGC 405
+ + + L AM + GC
Sbjct: 751 LKEAYKYLKAMLDAGC 766
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 164 TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLK 223
+ YN ++ KKG + +L +M + D+ TY +I+GL GR + A ++L
Sbjct: 630 SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLD 689
Query: 224 DMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER 283
+ G ++V+ + + + L ++ + KS P+VV+Y ++I+ +
Sbjct: 690 RLTKQGGYLDIVMYNTLINALGKA-TRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 284 SQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
+ EA L M GCL NHVT T++D L
Sbjct: 749 GKLKEAYKYLKAMLDAGCLPNHVTD-TILDYL 779
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 125 CVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGE 184
C + + +++ + AD+A VL ++ G D VMYN +I K ++
Sbjct: 661 CAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEAT 720
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVV 236
+L M + PD+++Y TMIE AG+ ++AY LK M GC PN V
Sbjct: 721 QLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 9/193 (4%)
Query: 149 LWVLRKMEDFGSRPDTV---MYNVVIRLCCKKGDVEMGEKLLR---EMSLSDACPDLITY 202
L+ L + + ++PD+ M N + + KGD+ + KL M ++D TY
Sbjct: 576 LFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTS--YTY 633
Query: 203 ITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK 262
+M+ G + A +L M + C+ ++ + I GL + G K
Sbjct: 634 NSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTK 693
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVE 322
G ++V Y +LI + + ++ +EA + D M++ G + V+ T+I+ G ++
Sbjct: 694 QGGYL-DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 323 EAYRLVDKLVEHG 335
EAY+ + +++ G
Sbjct: 753 EAYKYLKAMLDAG 765
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 132/331 (39%), Gaps = 17/331 (5%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCK----KGDVEMGEKLLREMSLSDACPDLITYITMI 206
+ R+M+ G P + Y ++++ + K E+ E LL E S PD Y MI
Sbjct: 196 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMI 254
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
AG E A + M G + V ++ L + + D
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVT----YNSLMSFETSYKEVSKIYDQMQRSDI 310
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYR 326
+P+VV+Y LI+++ + EAL+V + M G H L+D+ G VE+A +
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA-K 369
Query: 327 LVDKLVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
V K + + D Y++++ + + +E AEK F+ + +P+ + L+K
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 385 CMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLL 444
+ V + + M G G C+ + A K M V
Sbjct: 430 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK--NFGSALGWYKEMESCGV-- 485
Query: 445 RPPYQDSAIDILRKSEEKDLVDLVNQLTGIR 475
PP Q + +L + +D ++ +LTGIR
Sbjct: 486 -PPDQKAKNVLLSLASTQDELEEAKELTGIR 515
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 5/261 (1%)
Query: 131 MFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM 190
M+ ++ + K+A + A V M G TV YN ++ +V K+ +M
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQM 305
Query: 191 SLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSX 250
SD PD+++Y +I+ A R E+A S+ ++M G P + + D SG
Sbjct: 306 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG-M 364
Query: 251 XXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT 310
+ P++ +YT+++ ++ S A R++ G N VT T
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 311 LIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY-SSLVISLIRIKRLEEAEKLFRELLAGE 369
LI VE+ + +K+ G+ ++++ + R K A ++E+ +
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 484
Query: 370 LKPDTLASSLLLKELCMKDRV 390
+ PD A ++LL +D +
Sbjct: 485 VPPDQKAKNVLLSLASTQDEL 505
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 147/398 (36%), Gaps = 49/398 (12%)
Query: 48 NSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGID 107
N L + K ++ V++++SR + FF+WAG Q GY S Y S+LG
Sbjct: 116 NKLEECDVKPSNELVVEILSRV-RNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKM 174
Query: 108 R--------------------NPQMICDLIESYEAEGCVV-----TVNMFREVLKLCKEA 142
R N Q + +I Y C V +N F + E
Sbjct: 175 RKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKY----CAVHDVGKAINTFHAYKRFKLEM 230
Query: 143 QLADV-----ALWVLRKMEDFG--------SRP-DTVMYNVVIRLCCKK-GDVEMGEKLL 187
+ D AL + + D G P D +N+V+ C G E++
Sbjct: 231 GIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVW 290
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
EM D+++Y +MI G L M+ P+ V +A+ L ++
Sbjct: 291 MEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKA 350
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
+ PNVVTY SLI+ C+ + EA V D M G T
Sbjct: 351 SFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 410
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELL 366
+ L EE + L+ K+ + G + Y L+ L R + + L+ E+
Sbjct: 411 YHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMK 467
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+ PD + +++ L + ++ + + M++ G
Sbjct: 468 EKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 123 EGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
+G T+ + +++ + + +L KM G P Y ++IR C+ D +
Sbjct: 402 KGLFPTIRTYHAFMRILRTGE---EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDN 458
Query: 183 GEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
L EM PDL +YI MI GL G+ E+AY K+M+ G PN
Sbjct: 459 VLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
RPD V + ++ L KG++E + M P++++Y ++ G A S
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
+L D++ +G P++V + + + RS K +PNVVTY +LI ++
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAY 303
Query: 281 CERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL-VDKLVEHGVSYG 339
EA+ + +M G N V+ TL+ + C ++ VD ++ S G
Sbjct: 304 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-----CSRSKKKVNVDTVLSAAQSRG 358
Query: 340 -----DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGF 394
Y+S + S I LE+A L++ + ++K D++ ++L+ C + +
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 418
Query: 395 YLLDAMENM 403
L ME++
Sbjct: 419 SYLKEMEDL 427
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 8/278 (2%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+ ++ C + AL V +KM D G PD V +N+V+ M
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 143
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH--GCSPNLVVLSAIFDGLCRSGS 249
+ PD T+ +I L G+ A L MR C P++V ++I G
Sbjct: 144 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 203
Query: 250 XXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAF 309
G +PN+V+Y +L+ ++ AL+VL ++ G + + V+
Sbjct: 204 IENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 262
Query: 310 TLIDSLC---DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELL 366
L++S G +E + ++ K E Y++L+ + L EA ++FR++
Sbjct: 263 CLLNSYGRSRQPGKAKEVFLMMRK--ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+KP+ ++ LL + ++ +L A ++ G
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 358
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 109/261 (41%), Gaps = 7/261 (2%)
Query: 150 WVLRKMEDF---GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
W + M+D P YN +I C G+ ++ ++M+ + PDL+T+ ++
Sbjct: 64 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL 123
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG-SXXXXXXXXXXXXKSGD 265
+ + A S + M+ P+ + I L + G S K +
Sbjct: 124 SAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE 183
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
CRP+VVT+TS++ + + + V + M A G N V+ L+ + G A
Sbjct: 184 CRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 243
Query: 326 RLVDKLVEHGVSYGDC--YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
++ + ++G+ D Y+ L+ S R ++ +A+++F + KP+ + + L+
Sbjct: 244 SVLGDIKQNGI-IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 302
Query: 384 LCMKDRVLDGFYLLDAMENMG 404
+ + + ME G
Sbjct: 303 YGSNGFLAEAVEIFRQMEQDG 323
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 121/321 (37%), Gaps = 37/321 (11%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+ E+ AEG + + ++ ++ AL VL ++ G PD V Y ++
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
+ +++ M P+++TY +I+ + G +A + + M G PN+V
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+ + RS G N Y S I S+ ++ +A+ +
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRG-INLNTAAYNSAIGSYINAAELEKAIALYQS 388
Query: 296 MRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKR 354
MR A+ VT LI C EA + ++ + + + YSS++ + + +
Sbjct: 389 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 448
Query: 355 LEEAE-----------------------------------KLFRELLAGELKPDTLASSL 379
+ EAE +LF E+ A ++PD++A S
Sbjct: 449 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSA 508
Query: 380 LLKELCMKDRVLDGFYLLDAM 400
L++ + + F L+D M
Sbjct: 509 LMRAFNKGGQPSNVFVLMDLM 529
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 19/249 (7%)
Query: 108 RNPQMIC--DLIESYEAEGCVV-TVNMFREV---------------LKLCKEAQLADVAL 149
R P ++ LI++Y + G + V +FR++ L C ++
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 348
Query: 150 WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGL 209
VL + G +T YN I ++E L + M D +T+ +I G
Sbjct: 349 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 408
Query: 210 CNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPN 269
C + +A S LK+M V S++ + G +G C P+
Sbjct: 409 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG-CEPD 467
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD 329
V+ YTS++ ++ +W +A + M A G + + L+ + G + L+D
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 527
Query: 330 KLVEHGVSY 338
+ E + +
Sbjct: 528 LMREKEIPF 536
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 104/236 (44%), Gaps = 12/236 (5%)
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
++ +++ +R D +YN++IRL + V+ L EM PD TY +I
Sbjct: 1 MKIQKNYCARND--IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGR 58
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVV 271
AG+ A +L+ DM +P+ + + + SG+ +G P++V
Sbjct: 59 AGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG-VGPDLV 117
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
T+ ++ ++ Q+++AL+ + M+ + T +I L G +A L + +
Sbjct: 118 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
Query: 332 VEHGVSYGDCYSSLV-----ISLIRIK-RLEEAEKLFRELLAGELKPDTLASSLLL 381
E +C +V + L +K +E +F ++A LKP+ ++ + L+
Sbjct: 178 REK---RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
C+P+ TY +LI + QW A+N++D M + T LI++ G EA
Sbjct: 42 CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 101
Query: 326 RLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAG-ELKPDTLASSLL---L 381
+ K+ ++GV ++V+S + R + EL+ G +++PDT +++ L
Sbjct: 102 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 161
Query: 382 KELCMKDRVLDGF 394
+L + LD F
Sbjct: 162 SKLGQSSQALDLF 174
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
RPD V + ++ L KG++E + M P++++Y ++ G A S
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
+L D++ +G P++V + + + RS K +PNVVTY +LI ++
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAY 435
Query: 281 CERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL-VDKLVEHGVSYG 339
EA+ + +M G N V+ TL+ + C ++ VD ++ S G
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-----CSRSKKKVNVDTVLSAAQSRG 490
Query: 340 -----DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGF 394
Y+S + S I LE+A L++ + ++K D++ ++L+ C + +
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 395 YLLDAMENM 403
L ME++
Sbjct: 551 SYLKEMEDL 559
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 8/278 (2%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+ ++ C + AL V +KM D G PD V +N+V+ M
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 275
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVH--GCSPNLVVLSAIFDGLCRSGS 249
+ PD T+ +I L G+ A L MR C P++V ++I G
Sbjct: 276 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 335
Query: 250 XXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAF 309
G +PN+V+Y +L+ ++ AL+VL ++ G + + V+
Sbjct: 336 IENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 394
Query: 310 TLIDSLC---DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELL 366
L++S G +E + ++ K E Y++L+ + L EA ++FR++
Sbjct: 395 CLLNSYGRSRQPGKAKEVFLMMRK--ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
+KP+ ++ LL + ++ +L A ++ G
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 490
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 109/261 (41%), Gaps = 7/261 (2%)
Query: 150 WVLRKMEDF---GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
W + M+D P YN +I C G+ ++ ++M+ + PDL+T+ ++
Sbjct: 196 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL 255
Query: 207 EGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG-SXXXXXXXXXXXXKSGD 265
+ + A S + M+ P+ + I L + G S K +
Sbjct: 256 SAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE 315
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
CRP+VVT+TS++ + + + V + M A G N V+ L+ + G A
Sbjct: 316 CRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 375
Query: 326 RLVDKLVEHGVSYGDC--YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
++ + ++G+ D Y+ L+ S R ++ +A+++F + KP+ + + L+
Sbjct: 376 SVLGDIKQNGI-IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 434
Query: 384 LCMKDRVLDGFYLLDAMENMG 404
+ + + ME G
Sbjct: 435 YGSNGFLAEAVEIFRQMEQDG 455
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 121/321 (37%), Gaps = 37/321 (11%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+ E+ AEG + + ++ ++ AL VL ++ G PD V Y ++
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
+ +++ M P+++TY +I+ + G +A + + M G PN+V
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+ + RS G N Y S I S+ ++ +A+ +
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRG-INLNTAAYNSAIGSYINAAELEKAIALYQS 520
Query: 296 MRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKR 354
MR A+ VT LI C EA + ++ + + + YSS++ + + +
Sbjct: 521 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 580
Query: 355 LEEAE-----------------------------------KLFRELLAGELKPDTLASSL 379
+ EAE +LF E+ A ++PD++A S
Sbjct: 581 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSA 640
Query: 380 LLKELCMKDRVLDGFYLLDAM 400
L++ + + F L+D M
Sbjct: 641 LMRAFNKGGQPSNVFVLMDLM 661
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 19/249 (7%)
Query: 108 RNPQMIC--DLIESYEAEGCVV-TVNMFREV---------------LKLCKEAQLADVAL 149
R P ++ LI++Y + G + V +FR++ L C ++
Sbjct: 421 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 480
Query: 150 WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGL 209
VL + G +T YN I ++E L + M D +T+ +I G
Sbjct: 481 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 540
Query: 210 CNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPN 269
C + +A S LK+M V S++ + G +G C P+
Sbjct: 541 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG-CEPD 599
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD 329
V+ YTS++ ++ +W +A + M A G + + L+ + G + L+D
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
Query: 330 KLVEHGVSY 338
+ E + +
Sbjct: 660 LMREKEIPF 668
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 107/242 (44%), Gaps = 13/242 (5%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
+V W ++ +++ +R D +YN++IRL + V+ L EM PD TY +
Sbjct: 128 NVFKW-MKIQKNYCARND--IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDAL 184
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I AG+ A +L+ DM +P+ + + + SG+ +G
Sbjct: 185 INAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG- 243
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
P++VT+ ++ ++ Q+++AL+ + M+ + T +I L G +A
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 326 RLVDKLVEHGVSYGDCYSSLV-----ISLIRIK-RLEEAEKLFRELLAGELKPDTLASSL 379
L + + E +C +V + L +K +E +F ++A LKP+ ++ +
Sbjct: 304 DLFNSMREK---RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 380 LL 381
L+
Sbjct: 361 LM 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
C+P+ TY +LI + QW A+N++D M + T LI++ G EA
Sbjct: 174 CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 233
Query: 326 RLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAG-ELKPDTLASSLL---L 381
+ K+ ++GV ++V+S + R + EL+ G +++PDT +++ L
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 382 KELCMKDRVLDGF 394
+L + LD F
Sbjct: 294 SKLGQSSQALDLF 306
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 113/239 (47%), Gaps = 4/239 (1%)
Query: 155 MEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGR 214
M+ G +P YN +I CK G +LL E S + P TY ++E LC
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 215 PEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYT 274
A ++L+ M + + + GLC + + GDCRP+ T
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQ-GDCRPDEYTLN 451
Query: 275 SLIQSFCERSQWNEALNVLDRMRAFG-CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV- 332
++I C+ + ++A+ VLD M C + VT T++ L +G EEA ++++++
Sbjct: 452 TVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMP 511
Query: 333 EHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRV 390
E+ + G Y++++ L ++ + +EA +F +L + D+ ++++ LC+ ++V
Sbjct: 512 ENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 96/256 (37%), Gaps = 37/256 (14%)
Query: 164 TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLK 223
T +YN+ +R C + +L M D PD T T+I GLC GR +DA +L
Sbjct: 412 TRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
Query: 224 DMRVHG-CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
DM C+P+ V L+ + GL G +P VV Y ++I+ +
Sbjct: 472 DMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV---------- 332
+ +EA++V ++ A+ T +ID LC V+ A + D ++
Sbjct: 532 LHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFV 591
Query: 333 --------------------------EHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELL 366
+ CY++++ R EA ++ E+
Sbjct: 592 YAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMR 651
Query: 367 AGELKPDTLASSLLLK 382
PD + +L K
Sbjct: 652 KNGQAPDAVTWRILDK 667
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 11/268 (4%)
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM-----SLSDA 195
E + +VA V +M G RP+++ +V+I K DVE G KL++E+ + +D
Sbjct: 209 EIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDT 268
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXX 255
+ +++ +C G D + + ++M + + D LCR
Sbjct: 269 SMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRY-RRNHGAA 327
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
KS +P +Y ++I C+ A +L+ F + T L++SL
Sbjct: 328 RIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESL 387
Query: 316 C---DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKP 372
C D G L+ L + G Y+ + L + E + +L G+ +P
Sbjct: 388 CKELDTGKARNVLELM--LRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRP 445
Query: 373 DTLASSLLLKELCMKDRVLDGFYLLDAM 400
D + ++ LC RV D +LD M
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDM 473
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 2/259 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A +L + +F P Y +++ CK+ D +L M + Y +
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
GLC P + ++L M C P+ L+ + +GLC+ G C
Sbjct: 421 GLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCA 480
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT-LIDSLCDKGCVEEAYR 326
P+ VT +++ + + EAL+VL+R+ + V A+ +I L +EA
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 327 LVDKLVEHGVSY-GDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
+ +L + V+ Y+ ++ L +++ A+K + +++ + D + LK LC
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 386 MKDRVLDGFYLLDAMENMG 404
+ D + L + + G
Sbjct: 601 QSGYLSDACHFLYDLADSG 619
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 86/229 (37%), Gaps = 5/229 (2%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P YN ++ C V KL+ +M PD++T+ T+I G C E A+ +
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCR----SGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
+MRV G PN + LS + G + D + +L+
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 278 QSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
S C +N+ + + M + +IDSLC A R+V + G+
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 338 -YGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
Y++++ L + A +L E E P LL++ LC
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLC 388
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 125/357 (35%), Gaps = 58/357 (16%)
Query: 133 REVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSL 192
R + +C + D AL +L + G RPD++ + VI C G + +
Sbjct: 59 RRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLA 118
Query: 193 SDACPD-------------------------------------LITYITMIEGLCNAGRP 215
S PD L Y ++ LC R
Sbjct: 119 SGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRV 178
Query: 216 EDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTS 275
DA+ L+ DMR G P++V + + G C G RPN +T +
Sbjct: 179 IDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCG-IRPNSLTLSV 237
Query: 276 LIQSFCE-----------RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
LI F + + W N D AN L+DS+C +G +
Sbjct: 238 LIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFAN------LVDSMCREGYFNDI 291
Query: 325 YRLVDKL-VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
+ + + + + V+ Y ++ SL R +R A ++ + + LKP + + ++
Sbjct: 292 FEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHG 351
Query: 384 LCMKDRVLDGFYLLDAMENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKK 440
LC + + LL+ E LC++ +A + ++ML+K
Sbjct: 352 LCKDGGCMRAYQLLE--EGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRK 406
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 5/153 (3%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
G V + R + KL K D A+ V ++E D+ Y ++I C V+M
Sbjct: 518 GVVAYNAVIRGLFKLHK----GDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMA 573
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
+K ++ D Y ++GLC +G DA L D+ G PN+V + +
Sbjct: 574 KKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAE 633
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSL 276
RSG K+G P+ VT+ L
Sbjct: 634 CSRSGLKREAYQILEEMRKNGQA-PDAVTWRIL 665
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 3/215 (1%)
Query: 169 VVIRLCCKKG-DVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRV 227
VI + +KG VE + ++S D++ Y MI+ A E A SL K M+
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 228 HGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWN 287
G P+ +++F L SG C+P TY ++I S+ +
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG-CKPGCKTYAAMIASYVRLGLLS 602
Query: 288 EALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLV 346
+A+++ + M G N V +LI+ + G VEEA + + EHGV +SL+
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 347 ISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+ ++ LEEA +++ ++ E PD AS+ +L
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+ ++K +A+L + AL + + M++ G+ PD YN + ++ V+ +++L EM
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
S P TY MI G DA L + M G PN VV ++ +G SG
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTL 311
+ G + N + TSLI+++ + EA V D+M+ + + ++
Sbjct: 638 EAIQYFRMMEEHG-VQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSM 696
Query: 312 IDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFREL 365
+ D G V EA + + L E G +++++ + L+EA ++ E+
Sbjct: 697 LSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEM 750
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 122/290 (42%), Gaps = 2/290 (0%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
L++ E +G + +L L +A + AL RK+ G PDTV + V+ + C
Sbjct: 362 LLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
++ V E ++ EM + D + +++ N G A +L + ++ C +
Sbjct: 422 QRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD-CVLSST 480
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
L+A+ D G R +V+ Y +I+++ + +AL++
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 296 MRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKR 354
M+ G + T +L L V+EA R++ ++++ G G Y++++ S +R+
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 355 LEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L +A L+ + +KP+ + L+ V + ME G
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG 650
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 113/311 (36%), Gaps = 35/311 (11%)
Query: 129 VNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLR 188
+ F ++ L +A + A + +M G DTV +N +I C G + E LL+
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 189 EMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG 248
+M PD TY ++ +AG E A + +R G P+ V A+ LC+
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 249 SXXXXXXXXXXXXKSG---------------------------------DCRPNVVTYTS 275
++ DC + T +
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA 484
Query: 276 LIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCV-EEAYRLVDKLVEH 334
+I + E+ W EA V R N V + ++ K + E+A L +
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ 544
Query: 335 GVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDG 393
G +C Y+SL L + ++EA+++ E+L KP + ++ + D
Sbjct: 545 GTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDA 604
Query: 394 FYLLDAMENMG 404
L +AME G
Sbjct: 605 VDLYEAMEKTG 615
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 114/281 (40%), Gaps = 5/281 (1%)
Query: 88 SGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADV 147
SG R+ Y G + + L + + +G + + ++ L D
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A +L +M D G +P Y +I + G + L M + P+ + Y ++I
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G +G E+A + M HG N +VL+++ + G K +
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGC-LEEARRVYDKMKDSEGG 687
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P+V S++ + +EA ++ + +R G + ++ T++ G ++EA +
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEV 746
Query: 328 VDKLVEHGVSYGDC--YSSLVISLIRIKRLEEAEKLFRELL 366
+++ E G+ DC ++ ++ +L E +LF E+L
Sbjct: 747 AEEMRESGL-LSDCTSFNQVMACYAADGQLSECCELFHEML 786
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 8/232 (3%)
Query: 140 KEAQLADVA--LWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
K ++AD A L +R+ +D S PD V Y V+ G ++ ++L EM+
Sbjct: 426 KNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPA 485
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVH-GCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
+ ITY +++G C + + A LL++M G P++V + I DG C
Sbjct: 486 NRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG-CILIDDSAGALA 544
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT-LIDSL 315
++ P ++YT+L+++F Q A V D M + + A+ L++
Sbjct: 545 FFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGY 604
Query: 316 CDKGCVEEAYRLVDKLVEHGVSYGD--CYSSLVISLIRIKRLEEAEKLFREL 365
C G +E+A R+V ++ E+G Y + Y SL + + ++ +A L++E+
Sbjct: 605 CRLGLIEDAQRVVSRMKENGF-YPNVATYGSLANGVSQARKPGDALLLWKEI 655
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+ V+ A L D A VL +M G + + YNV+++ CK+ ++ E LLREM+
Sbjct: 455 YTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMT 514
Query: 192 LSDAC--PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGS 249
DA PD+++Y +I+G A + +MR G +P + + + SG
Sbjct: 515 -EDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQ 573
Query: 250 XXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAF 309
+ +++ + L++ +C +A V+ RM+ G N T
Sbjct: 574 PKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYG 633
Query: 310 TLIDSLC 316
+L + +
Sbjct: 634 SLANGVS 640
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 139 CKEAQLADVALWVLRKM-EDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CK+ Q+ D A +LR+M ED G PD V YN++I C D EM P
Sbjct: 498 CKQLQI-DRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAP 556
Query: 198 DLITYITMIEGLCNAGRPEDAY----SLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXX 253
I+Y T+++ +G+P+ A ++ D RV +L+ + + +G CR G
Sbjct: 557 TKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKV---DLIAWNMLVEGYCRLGLIEDA 613
Query: 254 XXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
++G PNV TY SL + + +AL
Sbjct: 614 QRVVSRMKENG-FYPNVATYGSLANGVSQARKPGDAL 649
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 151 VLRKMEDFG-------SRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYI 203
+ R+++ FG SRPDT +N V+ C GD + KL EMS D PD++TY
Sbjct: 216 ITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYN 275
Query: 204 TMIEGLCNAGRPE 216
MI+ GR E
Sbjct: 276 VMIKLCARVGRKE 288
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 118/290 (40%), Gaps = 6/290 (2%)
Query: 76 LGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREV 135
L F +A Q +RHS + LG R +I D++ + + G +T +F +
Sbjct: 66 LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYL 125
Query: 136 LKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR-LCCKKGDVEMGEKLLREMSLSD 194
+K+ EA+L + L KM +F P N ++ L +G ++ +L + L
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHG 185
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
P+ +Y +++ C AY L M P++ + G CR G
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
G V +LI C++ ++E L+ M + G + + L+
Sbjct: 246 ELLDDMLNKG-----FVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRE 364
C G VEEA +V+ ++++G + +VI LI + E KLF E
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLE 350
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL 244
+L REMS + +TY T+I+GL AG + A + K+M G P+++ + + DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 245 CRSGSXXXXXXXXXXXXKSG--------DCRPNVVTYTSLIQSFCERSQWNEALNVLDRM 296
C++G +PNVVTYT++I FC++ EA + +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 297 RAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLE 356
+ G L + T TLI + G + L+ ++ + LV ++ RL+
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLD 181
Query: 357 EAEKLFRELLA 367
+ F E+L+
Sbjct: 182 KG---FLEMLS 189
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+L G V + +++ +A D+A + ++M G PD + YN+++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 175 CKKGD---------VEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDM 225
CK G VE G L +SL P+++TY TMI G C G E+AY+L + M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 226 RVHGCSPNLVVLSAIFDGLCRS 247
+ G P+ S ++ L R+
Sbjct: 122 KEDGPLPD----SGTYNTLIRA 139
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 15/249 (6%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
KE + DV +L+KM G PD + ++ + K G+ E + + PD
Sbjct: 395 AKENHIEDVER-ILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPD 453
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
Y MI G NAG+P+ L+K+M+ + V A+ + G
Sbjct: 454 EKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISS 513
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG------CLANHVTAFTLI 312
+ D + Y+ ++++ + Q ++A + D MR G C+AN V A+
Sbjct: 514 SMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGE 573
Query: 313 DSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLA-GEL 370
+SL ++A RL+ +L + G+ G Y+ LV + + +EEAE+L ++ GE
Sbjct: 574 NSL------DKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEA 627
Query: 371 KPDTLASSL 379
P L SL
Sbjct: 628 PPFELQVSL 636
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 8/271 (2%)
Query: 92 HSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWV 151
H+ +Y +A+ L D + ++ DL E +E V ++N + K+ + A
Sbjct: 121 HAIVLYAQANML---DHSLRVFRDL-EKFEISRTVKSLNALLFACLVAKDYKEAKRVYIE 176
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
+ KM +G PD YN +I++ C+ G ++ EM P+ ++ MI G
Sbjct: 177 MPKM--YGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVV 271
+ ++ +L M+ G + + + LC+ +G +PN V
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG-MKPNTV 293
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
TY+ LI FC + EA + M GC + FTLI LC G E A L +
Sbjct: 294 TYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKES 353
Query: 332 VEHG-VSYGDCYSSLVISLIRIKRLEEAEKL 361
+E V SLV L + ++EEA++L
Sbjct: 354 MEKNWVPSFSIMKSLVNGLAKDSKVEEAKEL 384
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P++ TY +I+ FCE + + +++ M G N + +I + +E ++
Sbjct: 185 PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 328 VDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
+ + + GV+ G Y+ + SL + K+ +EA+ L +L+ +KP+T+ S L+ C
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 387 KDRVLDGFYLLDAMENMGC 405
+D + L M N GC
Sbjct: 305 EDDFEEAKKLFKIMVNRGC 323
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 23/282 (8%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
V +LCK+ D A ++ ME+ G RP +Y+ +I K+G V E+ +M S
Sbjct: 554 VNELCKKND-RDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESG 612
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
PD I Y+ MI GR ++A L++++ H P+ + + G + G
Sbjct: 613 IQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGC 672
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
+ G PNVV YT+LI F ++ + + + M +H+ TL+
Sbjct: 673 QYLDKMLEDG-LSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG 731
Query: 315 LCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRL--------EEAEKLFRELL 366
L + + R V +VE G L+ LIR K L K F +
Sbjct: 732 LW-RAMARKKKRQV--IVEPG------KEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEV 782
Query: 367 AGELK----PDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
G++K P+ + ++ C R+ + + L++M+ G
Sbjct: 783 IGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEG 824
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 2/238 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL + KM + G P YN VI+ ++ +E L+ + D PD+ TY+ ++
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
LC + A++++ M G P + + S+I L + G +SG +
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESG-IQ 614
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P+ + Y +I ++ + +EA +++ + + T LI G +E+ +
Sbjct: 615 PDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQY 674
Query: 328 VDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
+DK++E G+S Y++L+ ++ + + LF + ++K D +A LL L
Sbjct: 675 LDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 4/180 (2%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P+ ++N +I C G ++ L M P+L+TY +++ AG E A L
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+ C P+ V+ S + GLC KSG PN +Y L+Q C
Sbjct: 852 FEGTN---CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSG-INPNKDSYEKLLQCLC 907
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC 341
EA+ V+ M A + LI LC++ + EA L +V+ G S +C
Sbjct: 908 YSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNC 967
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 128/329 (38%), Gaps = 46/329 (13%)
Query: 116 LIESYEAEGCVVTVNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLC 174
+I++ E G TV ++ ++ L K+ ++ + A KM + G +PD + Y ++I
Sbjct: 569 IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVE-AEETFAKMLESGIQPDEIAYMIMINTY 627
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
+ G ++ +L+ E+ P TY +I G G E L M G SPN+
Sbjct: 628 ARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNV 687
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ---------------- 278
V+ +A+ + G ++ D + + + Y +L+
Sbjct: 688 VLYTALIGHFLKKGDFKFSFTLFGLMGEN-DIKHDHIAYITLLSGLWRAMARKKKRQVIV 746
Query: 279 ----------------------SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
S + A+ V+ +++ + N T+I C
Sbjct: 747 EPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKK-SIIPNLYLHNTIITGYC 805
Query: 317 DKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTL 375
G ++EAY ++ + + G+ Y+ L+ S I +E A LF +PD +
Sbjct: 806 AAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQV 862
Query: 376 ASSLLLKELCMKDRVLDGFYLLDAMENMG 404
S LLK LC R LD L+ M+ G
Sbjct: 863 MYSTLLKGLCDFKRPLDALALMLEMQKSG 891
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 9/279 (3%)
Query: 129 VNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
VN+++ + CK A+ A + ME G D VMY +++ CK ++ M +L
Sbjct: 237 VNLYKSLFYCFCKRGCAAE-AEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLY 295
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
M D + T+I G G + + M G N+ + C+
Sbjct: 296 LRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKE 355
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
G+ S D NV YT+LI F ++ ++A+++L RM G + +H+T
Sbjct: 356 GNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHIT 415
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLE-EAEKLFRELL 366
F L+ L C E Y +V +++ + G + VI + +E + E L E+
Sbjct: 416 YFVLLKML--PKCHELKYAMV--ILQSILDNGCGINPPVID--DLGNIEVKVESLLGEIA 469
Query: 367 AGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMGC 405
+ + +++ LC + + ++ M N+GC
Sbjct: 470 RKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGC 508
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
P+L + T+I G C AGR ++AY+ L+ M+ G PNLV + + +G
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGD----IES 847
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
+ +C P+ V Y++L++ C+ + +AL ++ M+ G N + L+ LC
Sbjct: 848 AIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLC 907
Query: 317 DKGCVEEAYRLVDKLVEHGV-SYGDCYSSLVISLIRIKRLEEAEKLF 362
EA ++V + + ++ L+ L K+L EA LF
Sbjct: 908 YSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 117/285 (41%), Gaps = 31/285 (10%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCK----------------------------K 177
D A+ +L +M D G PD + Y V++++ K
Sbjct: 395 DKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL 454
Query: 178 GDVEMG-EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVV 236
G++E+ E LL E++ DA + + LC+ A S ++ M GC+P
Sbjct: 455 GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFS 514
Query: 237 LSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRM 296
+++ L + + + D P+V TY ++ C+++ + A ++D M
Sbjct: 515 YNSVIKCLFQE-NIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 297 RAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRL 355
G ++I SL +G V EA K++E G+ + Y ++ + R R+
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 356 EEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
+EA +L E++ L+P + ++L+ + G LD M
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKM 678
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D A L M+ G P+ V Y ++++ + GD+E L ++ PD + Y T+
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTL 867
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
++GLC+ RP DA +L+ +M+ G +PN + LC S + D
Sbjct: 868 LKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYS-RLTMEAVKVVKDMAALD 926
Query: 266 CRPNVVTYTSLIQSFCERSQWNEA 289
P + +T LI CE + EA
Sbjct: 927 IWPRSINHTWLIYILCEEKKLREA 950
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 4/237 (1%)
Query: 117 IESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
IE GC + V+K L +E + D+A V +++ PD Y +V+ C
Sbjct: 500 IEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLV-NIIQELDFVPDVDTYLIVVNELC 558
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLV 235
KK D + ++ M P + Y ++I L GR +A M G P+ +
Sbjct: 559 KKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEI 618
Query: 236 VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDR 295
+ + R+G K RP+ TYT LI F + + LD+
Sbjct: 619 AYMIMINTYARNGRIDEANELVEEVVKHF-LRPSSFTYTVLISGFVKMGMMEKGCQYLDK 677
Query: 296 MRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIR 351
M G N V LI KG + ++ L + E+ + + Y +L+ L R
Sbjct: 678 MLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 7/229 (3%)
Query: 8 RFS--PCLHKLKTLPFSSQKMGMASLADTLYSHLHQCN-GSVENSLSKIKPKLDSQCVIQ 64
RFS P L K +TLP S + + +Y+ L N S + L + + DS + +
Sbjct: 37 RFSQKPKLVKTQTLPDPS--VYTRDIVSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINR 94
Query: 65 VVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEG 124
V+ P Q FF WA G++H + Y + G Q + + + +G
Sbjct: 95 VLKAHPP--MQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKG 152
Query: 125 CVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGE 184
++ + ++ + D A+ + +M D G P V Y +++ G VE
Sbjct: 153 VLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEAT 212
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
++ +EM S P+ TY ++E L G+ E+A + M+ G P+
Sbjct: 213 EVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPD 261
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
AL L M++ G P + Y +I G+++ +++ REM++ P++ TY +MI
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG 248
GLC AG +A LLK+M GC+PN VV S + L ++G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAG 808
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVV 271
+P A + L M+ G P+++ + + DG SG G PNV
Sbjct: 702 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQL-PNVF 760
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
TY S+I+ C ++ EA +L M + GC N V TL+ L G + EA +++ ++
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 332 VEHGVSYGDCYSSLVISLIRIKR 354
V+ G Y LV +++ +R
Sbjct: 821 VKKG-----HYVHLVSKMMKYRR 838
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 120/313 (38%), Gaps = 3/313 (0%)
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
R + +Y +R E E++L E + +I G E+A
Sbjct: 68 RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 127
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
+ +M C + +A+ + S P+V +Y +LI+
Sbjct: 128 VFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 187
Query: 281 CERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG- 339
C + + EA+ ++D + G +H+T L+ KG EE ++ ++VE V
Sbjct: 188 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 247
Query: 340 DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDA 399
Y++ ++ L + EE LF +L ELKPD + ++K + ++ +
Sbjct: 248 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 307
Query: 400 MENMGCXXXXXXXXXXXXXXGLCQKNHLAEATKLAKIMLKKSVLLRPPYQDSAIDILRKS 459
+E GC +C+ L A +L K + K +L+ +D L K
Sbjct: 308 IEKNGC--RPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKG 365
Query: 460 EEKDLVDLVNQLT 472
++D + + +L
Sbjct: 366 SKQDEAEEIVELA 378
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC + + A+ ++ ++E+ G +PD + +N+++ KG E GE++ M +
Sbjct: 187 LCGKGSFTE-AVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKR 245
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D+ +Y + GL + E+ SL ++ + P++ +A+ G G
Sbjct: 246 DIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWY 305
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
K+G CRP + SL+ + C+ A + + A L + ++D+L
Sbjct: 306 KEIEKNG-CRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVK 364
Query: 318 KGCVEEAYRLVD 329
+EA +V+
Sbjct: 365 GSKQDEAEEIVE 376
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LC++ L + A+ +L ++E+ G +PD V +N ++ KG E+GE++ +M +
Sbjct: 190 LCEKDSLPE-AVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAI 248
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D+ TY + GL N + ++ +L +++ G P++ +A+ G G
Sbjct: 249 DIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWY 308
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
K G RP+ T+ L+ + C+ + A+ + + L T L+D L
Sbjct: 309 KEIVKHG-YRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVK 367
Query: 318 KGCVEEAYRLV 328
EEA +V
Sbjct: 368 GSKREEAEEIV 378
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVV 271
AG E+A + ++M C +++ +A+ S +P++V
Sbjct: 122 AGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIV 181
Query: 272 TYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
+Y +LI++ CE+ EA+ +LD + G + VT TL+ S KG E + K+
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKM 241
Query: 332 VEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
VE V+ Y++ ++ L + +E LF EL A LKPD + + +++
Sbjct: 242 VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 1/203 (0%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
++K C A + A V + + +G R +Y + + C K GD + + ++M D
Sbjct: 615 LMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKD 674
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
PD + + +I+ +A ++A+ +L+D + G + S++ G C +
Sbjct: 675 VTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLM-GACCNAKDWKKA 733
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
KS RP + T +LI + CE +Q +A+ LD ++ G N +T L+ +
Sbjct: 734 LELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLA 793
Query: 315 LCDKGCVEEAYRLVDKLVEHGVS 337
K E +++L+ + GVS
Sbjct: 794 SERKDDFEVSFKLLSQAKGDGVS 816
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 127/315 (40%), Gaps = 39/315 (12%)
Query: 128 TVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
T++ F ++ +C +Q + A VLR +++ G D +Y +I C K G V+ ++
Sbjct: 466 TMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVF 525
Query: 188 REMS-------------LSDAC----------------------PDLITYITMIEGLCNA 212
+MS L D C PD + + +I +
Sbjct: 526 HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQS 585
Query: 213 GRPEDAYSLLKDMR--VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
G + A+ +L +M+ H P+ + + A+ C +G K G R
Sbjct: 586 GAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYG-IRGTP 644
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
YT + S + W+ A ++ M+ + V LID ++EA+ ++
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 331 LVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
G+ G YSSL+ + K ++A +L+ ++ + +L+P + L+ LC ++
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 390 VLDGFYLLDAMENMG 404
+ LD ++ +G
Sbjct: 765 LPKAMEYLDEIKTLG 779
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 111/247 (44%), Gaps = 6/247 (2%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P +N+++ +C D+E +LR + S D Y T+I +G+ + + +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
M G NL A+ DG R+G +S + +P+ V + +LI +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQ-VAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 282 ERSQWNEALNVLDRMRA--FGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV-SY 338
+ + A +VL M+A +H++ L+ + C+ G VE A + + ++G+
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGT 643
Query: 339 GDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLD-GFYLL 397
+ Y+ V S + + A +++++ ++ PD + S L+ ++ ++LD F +L
Sbjct: 644 PEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI-DVAGHAKMLDEAFGIL 702
Query: 398 DAMENMG 404
++ G
Sbjct: 703 QDAKSQG 709
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 115 DLIESYEAEGCVVTVNMFREVLK-LCKEAQL-ADVALWVLRKMEDFGSRP-DTVMYNVVI 171
+L E E+ G + F +L+ LC+ + + A +++ +K G+ P D+ YN++I
Sbjct: 207 ELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK----GNIPFDSCSYNIMI 262
Query: 172 RLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCS 231
K G+VE EK+L+EM S PD ++Y +IEGL GR D+ + +++ G
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 232 PNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD--CRPNVVTYTSLIQSFCERSQWNEA 289
P+ V +A+ +C S + D C PN+ TY+ L+ + + ++A
Sbjct: 323 PDANVYNAM---ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDA 379
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKG 319
L + + M + G L + + LC G
Sbjct: 380 LEIFEEMLSRGVLPTTGLVTSFLKPLCSYG 409
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 3/252 (1%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLAD 146
Q+ Y+ Y K LLG P L + EG TV ++ +L + L D
Sbjct: 117 QTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLID 176
Query: 147 VALWVLRKMEDFGS-RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
A +L KM+ F +PD Y+ +++ C ++ + L +EM P+ +T +
Sbjct: 177 DAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIV 236
Query: 206 IEGLCNAGRPEDAYSLLKDMRVH-GCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG 264
+ G GR + +L DM V C P++ ++ I G G
Sbjct: 237 LSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFG 296
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEA 324
P T+ LI S+ ++ +++ +V++ MR T +I++ D G +
Sbjct: 297 -IEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNM 355
Query: 325 YRLVDKLVEHGV 336
D++ G+
Sbjct: 356 ELTFDQMRSEGM 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 4/237 (1%)
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR 172
I D ++S+ C V + +LK C +A D+ + ++M++ P+TV N+V+
Sbjct: 181 ILDKMKSFPQ--CQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLS 238
Query: 173 LCCKKGDVEMGEKLLREMSLSDAC-PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCS 231
+ G + EK+L +M +S AC PD+ T ++ N G+ + S + R G
Sbjct: 239 GYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIE 298
Query: 232 PNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALN 291
P + I G + + TY ++I++F +
Sbjct: 299 PETRTFN-ILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEL 357
Query: 292 VLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVIS 348
D+MR+ G A+ T LI+ + G + V + + + + VIS
Sbjct: 358 TFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVIS 414
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 22/235 (9%)
Query: 155 MEDFGSRPDTVMYNVVIRLCCK-KGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA- 212
EDF + D+V +N ++ C + + VEM +L + M +S+ PD IT ++ G
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEM-LRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 213 ----GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRP 268
G YSL G +P + + + D + GS S D R
Sbjct: 488 SLKLGSQVHCYSLKT-----GLAPEQFIKNGLIDMYAKCGSLGQARRIF----DSMDNR- 537
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
+VV++++LI + + EAL + M++ G NHVT ++ + G VEE +L
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597
Query: 329 DKL-VEHGVSYGDCYSSLVISLI-RIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+ EHG+S + S V+ L+ R RL EAE+ E+ +L+PD + LL
Sbjct: 598 ATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEM---KLEPDVVVWKTLL 649
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 130/326 (39%), Gaps = 30/326 (9%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLAD 146
++G+R S Y + + + + I ++ E G + F V+ E+ +
Sbjct: 73 ETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNME 132
Query: 147 VALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLR---EMSLSDACPDLITYI 203
A+ L KM++ G P T YN +I+ G E +LL E D P++ T+
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 204 TMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG-SXXXXXXXXXXXXK 262
+++ C + E+A+ ++K M G P+ V + I + G +
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 263 SGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC---DKG 319
+PN T ++ +C + + L + RM+ AN V +LI+ D+
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 320 CVEEA--YRLVDKLVEHGVSYGD---------------------CYSSLVISLIRIKRLE 356
++E L+ E G+ YS+++ + +E
Sbjct: 313 GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYME 372
Query: 357 EAEKLFRELLAGELKPDTLASSLLLK 382
+A ++F+E++ +KPD A S+L K
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSILAK 398
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
VL M++ + D + Y+ V+ G +E ++ +EM + PD Y + +G
Sbjct: 342 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 401
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
A P+ A LL+ + V PN+V+ + + G C +GS K G PN+
Sbjct: 402 RAKEPKKAEELLETLIVE-SRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG-VSPNI 459
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
T+ +L+ + E Q +A VL MR G + T L ++ G +E+ + ++
Sbjct: 460 KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINA 519
Query: 331 L 331
L
Sbjct: 520 L 520
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
R T + NV+I ++G + + + ++ + P LI+Y T++ + + S
Sbjct: 46 RSRTKLMNVLI----ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS 101
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
++ ++ G + + +A+ + SG+ + G P TY +LI+ +
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELG-LNPTTSTYNTLIKGY 160
Query: 281 CERSQWNEALNVLDRMRAFGCL---ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
+ + +LD M G + N T L+ + C K VEEA+ +V K+ E GV
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 338 YGDCYSSLVISLIRIKRLE----EAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDG 393
D + I+ +++ E E+E + + ++ + KP+ +++ C + RV DG
Sbjct: 221 -PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDG 279
Query: 394 FYLLDAMENM 403
+ M+ M
Sbjct: 280 LRFVRRMKEM 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Query: 178 GDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVL 237
G+ +M ++L M + D+ITY T++ +AG E A + K+M G P+
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 393
Query: 238 SAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMR 297
S + G R+ + RPNVV +T++I +C ++A+ V ++M
Sbjct: 394 SILAKGYVRAKEPKKAEELLETLIV--ESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 451
Query: 298 AFGCLANHVTAFTLI 312
FG N T TL+
Sbjct: 452 KFGVSPNIKTFETLM 466
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 131/358 (36%), Gaps = 92/358 (25%)
Query: 47 ENSLSKIKPKL-DSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSLLG 105
E + +KP +S VI + ++ P L + F W Q GY+H+ Y
Sbjct: 63 ETWIQNLKPGFTNSDVVIALRAQSDP---DLALDIFRWTAQQRGYKHNHEAYHTMIKQAI 119
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTV 165
+ + LIE A C ++V
Sbjct: 120 TGKRNNFVETLIEEVIAGACEMSV-----------------------------------P 144
Query: 166 MYNVVIRLCCKKG-----DVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRP----- 215
+YN +IR CC + ++ K+LR D+ PDL TY ++ L
Sbjct: 145 LYNCIIRFCCGRKFLFNRAFDVYNKMLRS---DDSKPDLETYTLLLSSLLKRFNKLNVCY 201
Query: 216 ---EDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVT 272
SL K M+ +G P+ VL+ I
Sbjct: 202 VYLHAVRSLTKQMKSNGVIPDTFVLNMI-------------------------------- 229
Query: 273 YTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV 332
I+++ + + +EA+ V M +G N T L+ +C+KG V + ++
Sbjct: 230 ----IKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQ 285
Query: 333 EHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDR 389
G V G CY L+ SL +RL+EA ++ ++LA L PD L + +L ELC R
Sbjct: 286 VKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGR 343
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 40/319 (12%)
Query: 101 SSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFG 159
++L R+ + + ++ E +G + ++F ++K C E L + AL + +ME G
Sbjct: 316 TTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEG-LKEEALVIQTEMEKKG 374
Query: 160 SRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAY 219
R +T++YN ++ K +E E L EM P TY +++ +P+
Sbjct: 375 IRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVE 434
Query: 220 SLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQS 279
+LL++M G PN+ + + R+ K +P+ +YT+LI +
Sbjct: 435 TLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHA 494
Query: 280 FCERSQWNEA--------------------LNVLDRMRAFG----------------CLA 303
+ S W+E +VLD R G
Sbjct: 495 YS-VSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG 553
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLF 362
+T TL+D +G EA +V + + G+ Y+ L+ + R + + +L
Sbjct: 554 TRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLL 613
Query: 363 RELLAGELKPDTLASSLLL 381
+E+ A LKPD++ S ++
Sbjct: 614 KEMAALNLKPDSITYSTMI 632
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 114/283 (40%), Gaps = 11/283 (3%)
Query: 125 CVVTVNMFREVLKLCKEAQLADVALW-VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
C + + R+ + KE +W + KM + G + ++ +++ C +G E
Sbjct: 311 CAILITTLRKAGRSAKE-------VWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEA 363
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
+ EM + I Y T+++ + E+ L +MR G P+ + + D
Sbjct: 364 LVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA 423
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNE-ALNVLDRMRAFGCL 302
R G PNV +YT LI ++ + ++ A + RM+ G
Sbjct: 424 YARRMQPDIVETLLREMEDLG-LEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKL 361
+ + LI + G E+AY +++ + G+ + Y+S++ + R + ++
Sbjct: 483 PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 362 FRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
++ +L ++K + + LL + ++ ++ MG
Sbjct: 543 WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMG 585
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 7/259 (2%)
Query: 150 WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGL 209
W+LRK +PD + +N++I +K + E L ++ S P TY +I+
Sbjct: 166 WILRKS---SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 222
Query: 210 CNAGRPEDAYSLLKDMRVHGCSPNLV---VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
C AG E A +L +M+ H SP + V +A +GL + K C
Sbjct: 223 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 282
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYR 326
+P TY +I + + S+ + + MR+ C N T L+++ +G E+A
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 327 LVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
+ ++L E G+ Y++L+ S R A ++F + +PD + ++++
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402
Query: 386 MKDRVLDGFYLLDAMENMG 404
D + + M+ +G
Sbjct: 403 RAGLHSDAEAVFEEMKRLG 421
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 121/285 (42%), Gaps = 3/285 (1%)
Query: 99 KASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMED 157
KA + G+ +++ ++++ + V ++ ++ L K + A+ V ++M+
Sbjct: 220 KAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR 279
Query: 158 FGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPED 217
+P T YN++I L K M KL EM P++ TY ++ G E
Sbjct: 280 DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEK 339
Query: 218 AYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
A + + ++ G P++ V +A+ + R+G G C P+ +Y ++
Sbjct: 340 AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG-CEPDRASYNIMV 398
Query: 278 QSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
++ ++A V + M+ G + L+ + V + +V ++ E+GV
Sbjct: 399 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE 458
Query: 338 YGDCYSSLVISLI-RIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+ +++L R+ + + EK+ E+ G D ++L+
Sbjct: 459 PDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 503
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Query: 142 AQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLIT 201
A L A V +M+ G P + +++ K DV E +++EMS + PD
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 463
Query: 202 YITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXX 261
+M+ G+ +L +M C+ ++ + + + ++G
Sbjct: 464 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG-FLERIEELFVEL 522
Query: 262 KSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCV 321
K + RP+VVT+TS I ++ + + + L V + M GC + TA L+ + + V
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 582
Query: 322 EEAYRLVDKLVEHGVSYGDCYSSLVISLI 350
E+ ++ + + GV+ SSLV L+
Sbjct: 583 EQVTSVL-RTMHKGVT----VSSLVPKLM 606
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 134/330 (40%), Gaps = 7/330 (2%)
Query: 81 FIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREV----L 136
F W Q Y +Y K S++G +M L + GC +++ + L
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 137 KLCKEAQLADVALWVLRKMEDFGS-RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDA 195
+A+ + L KM+ +P+ V YN+++R + G V+ L +++ +S
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXX 255
PD+ T+ +++ G ++ ++L MR + C P+++ + + D +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
+S + +P + T+ S+I ++ + ++A V +M + + +T +I
Sbjct: 300 TFKSLMRSKE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMY 358
Query: 316 CDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
G V A + +++ E V ++++ R EA+KLF A + PD
Sbjct: 359 GYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDA 418
Query: 375 LASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L K D L+ ME G
Sbjct: 419 STYKFLYKAYTKADMKEQVQILMKKMEKDG 448
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 134/330 (40%), Gaps = 7/330 (2%)
Query: 81 FIWAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREV----L 136
F W Q Y +Y K S++G +M L + GC +++ + L
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 137 KLCKEAQLADVALWVLRKMEDFGS-RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDA 195
+A+ + L KM+ +P+ V YN+++R + G V+ L +++ +S
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXX 255
PD+ T+ +++ G ++ ++L MR + C P+++ + + D +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
+S + +P + T+ S+I ++ + ++A V +M + + +T +I
Sbjct: 300 TFKSLMRSKE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMY 358
Query: 316 CDKGCVEEAYRLVDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
G V A + +++ E V ++++ R EA+KLF A + PD
Sbjct: 359 GYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDA 418
Query: 375 LASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L K D L+ ME G
Sbjct: 419 STYKFLYKAYTKADMKEQVQILMKKMEKDG 448
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 7/259 (2%)
Query: 150 WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGL 209
W+LRK +PD + +N++I +K + E L ++ S P TY +I+
Sbjct: 144 WILRKS---SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 210 CNAGRPEDAYSLLKDMRVHGCSPNLV---VLSAIFDGLCRSGSXXXXXXXXXXXXKSGDC 266
C AG E A +L +M+ H SP + V +A +GL + K C
Sbjct: 201 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 267 RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYR 326
+P TY +I + + S+ + + MR+ C N T L+++ +G E+A
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 327 LVDKLVEHGVSYG-DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELC 385
+ ++L E G+ Y++L+ S R A ++F + +PD + ++++
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 386 MKDRVLDGFYLLDAMENMG 404
D + + M+ +G
Sbjct: 381 RAGLHSDAEAVFEEMKRLG 399
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 121/285 (42%), Gaps = 3/285 (1%)
Query: 99 KASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLK-LCKEAQLADVALWVLRKMED 157
KA + G+ +++ ++++ + V ++ ++ L K + A+ V ++M+
Sbjct: 198 KAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR 257
Query: 158 FGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPED 217
+P T YN++I L K M KL EM P++ TY ++ G E
Sbjct: 258 DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEK 317
Query: 218 AYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
A + + ++ G P++ V +A+ + R+G G C P+ +Y ++
Sbjct: 318 AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG-CEPDRASYNIMV 376
Query: 278 QSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
++ ++A V + M+ G + L+ + V + +V ++ E+GV
Sbjct: 377 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE 436
Query: 338 YGDCYSSLVISLI-RIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+ +++L R+ + + EK+ E+ G D ++L+
Sbjct: 437 PDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Query: 142 AQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLIT 201
A L A V +M+ G P + +++ K DV E +++EMS + PD
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 202 YITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXX 261
+M+ G+ +L +M C+ ++ + + + ++G
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG-FLERIEELFVEL 500
Query: 262 KSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCV 321
K + RP+VVT+TS I ++ + + + L V + M GC + TA L+ + + V
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 560
Query: 322 EEAYRLVDKLVEHGVSYGDCYSSLVISLI 350
E+ ++ + + GV+ SSLV L+
Sbjct: 561 EQVTSVL-RTMHKGVT----VSSLVPKLM 584
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 4/221 (1%)
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR 172
I LIES++ + T +++ A + D A+ + +M+ G+ V +N ++
Sbjct: 86 IEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLA 145
Query: 173 LCCKKGDVEMGEKLLREMS--LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
C E +L E ++ PD I+Y +I+ C++G+PE A +++DM V G
Sbjct: 146 ACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGV 205
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEAL 290
++ + I L ++G G N V L+ + E + + L
Sbjct: 206 EVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKEL 265
Query: 291 NVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
++ M + G + V+ L+ + C KG + EA ++ + L
Sbjct: 266 --MEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGL 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%)
Query: 264 GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEE 323
+ P+ ++Y LI+S+C+ + +A+ ++ M G + T++ SL G V+E
Sbjct: 168 NNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDE 227
Query: 324 AYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKE 383
A L ++V G + ++ + + E ++L E+ + LKPDT++ + L+
Sbjct: 228 AESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTA 287
Query: 384 LCMKDRVLDGFYLLDAME 401
C+K + + + + +E
Sbjct: 288 YCVKGMMSEAKKVYEGLE 305
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 137 KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC 196
+LCK ++A+ RK+ D D V + VI K GD+ +L + D+
Sbjct: 55 ELCKVGKIAEA-----RKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSR 106
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
+++T+ M+ G + + A L ++M N+V + + DG +SG
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSIAEMLFQEM----PERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
+ N+V++ S++++ +R + +EA+N+ +RM + V+ ++D L
Sbjct: 163 FDEMPER-----NIVSWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMVDGLA 213
Query: 317 DKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFR 363
G V+EA RL D + E + +++++ + R++EA++LF+
Sbjct: 214 KNGKVDEARRLFDCMPERNII---SWNAMITGYAQNNRIDEADQLFQ 257
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 15/187 (8%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK + D A + + G +PD YN++IR + EKL EM P
Sbjct: 24 LCKAGKF-DEAGNIFTNLLISGLQPDVQTYNMMIRF----SSLGRAEKLYAEMIRRGLVP 78
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
D ITY +MI GLC + A + K CS + + +G C++
Sbjct: 79 DTITYNSMIHGLCKQNKLAQARKVSKS-----CS----TFNTLINGYCKATRVKDGMNLF 129
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
+ G NV+TYT+LI F + +N AL++ M + G ++ +T ++ LC
Sbjct: 130 CEMYRRGIV-ANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCS 188
Query: 318 KGCVEEA 324
+ + +A
Sbjct: 189 RKELRKA 195
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 14/174 (8%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
DT YN++I CK G + + + +S PD+ TY MI + GR E Y+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEKLYA-- 69
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+M G P+ + +++ GLC+ S C T+ +LI +C+
Sbjct: 70 -EMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV------SKSCS----TFNTLINGYCK 118
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
++ + +N+ M G +AN +T TLI G A + ++V +GV
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 5/257 (1%)
Query: 106 IDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTV 165
+DR+ Q +L E YE V ++N + K+ + A+ + KM +G PD
Sbjct: 127 LDRSIQTFRNL-EQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKM--YGIEPDLE 183
Query: 166 MYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDM 225
YN +IR+ C+ G ++ EM P ++ MI+G + ++ +++ M
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 226 RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQ 285
G + + + LC+ S RPN VTY+ LI FC
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVM-SCRMRPNSVTYSLLIHGFCSEEN 302
Query: 286 WNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE-HGVSYGDCYSS 344
+EA+N+ + M G + FTLI LC G E A L + +E + V
Sbjct: 303 LDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKW 362
Query: 345 LVISLIRIKRLEEAEKL 361
LV L +++EA++L
Sbjct: 363 LVNGLASRSKVDEAKEL 379
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
V + V+I +KGD++ L M S PDL+T +++I G G E +
Sbjct: 323 VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDAR 382
Query: 225 MRVHGCS-PNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRP--NVVTYTSLIQSFC 281
++GC N+++ +A+ D + GS D P VVT+T++I +
Sbjct: 383 ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF-------DNTPEKTVVTWTTMIAGYA 435
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE-HGVSYG- 339
+ EAL + +M NH+T ++ + G +E+ + + + + +S G
Sbjct: 436 LNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGL 495
Query: 340 DCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
D YS +V L R +LEEA +L R + A KPD
Sbjct: 496 DHYSCMVDLLGRKGKLEEALELIRNMSA---KPDA 527
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 4/181 (2%)
Query: 129 VNMFREVL-KLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
+ F +V+ LC+ + D A +L M G P ++N+V+ C K GD++ +++L
Sbjct: 372 IKPFSDVIHSLCRMRNVKD-AKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVL 430
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
+ M PD+ TY +I G G ++A +L + + + V A+ G C+
Sbjct: 431 KLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKI 490
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS-QWNEALNVLDRMRAFGCLANHV 306
+ G +PN Y LIQSFC ++ W +A + + M+ G N +
Sbjct: 491 EEYDEALKLLNEMDRFG-VQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAI 549
Query: 307 T 307
+
Sbjct: 550 S 550
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 127/306 (41%), Gaps = 23/306 (7%)
Query: 113 ICDLI-ESYEAEGC-VVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVV 170
+ DL+ E E E C V+ + + E++ L + + A V K E+FG P+ Y +
Sbjct: 213 LWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLT 272
Query: 171 IRLCCKKGDVEMG----EKLLREMSLSDA--CPDLITYITMIEGLCNAGRPEDAYSL--L 222
+ CK+ ++ EK+L+ LS+ ++IT+ C G+ E+AYS+ L
Sbjct: 273 LEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITW------FCKEGKAEEAYSVYEL 326
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+ P V + + LC++ R + ++ +I S C
Sbjct: 327 AKTKEKSLPPRFV--ATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCR 384
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK-GCVEEAYRLVDKLVEHGVSYGDC 341
+A +L M + G + F L+ C K G ++EA ++ KL+E D
Sbjct: 385 MRNVKDAKALLLDMISKGPAPGNAV-FNLVVHACSKTGDLDEAKEVL-KLMESRGLKPDV 442
Query: 342 YSSLVI--SLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDA 399
Y+ VI + ++EA+++ E K + L++ C + + LL+
Sbjct: 443 YTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNE 502
Query: 400 MENMGC 405
M+ G
Sbjct: 503 MDRFGV 508
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
P++ Y+ +I L +PE A+ L ++M GC N V +A+ RSG
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
S +C+P+V TY+ LI+SF + +++ ++L MR G N +T TLID+
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 108/288 (37%), Gaps = 37/288 (12%)
Query: 87 QSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLAD 146
Q Y+ + +Y K +LG + P+ +L + EGCVV
Sbjct: 143 QLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVV------------------- 183
Query: 147 VALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC-PDLITYITM 205
+ +Y ++ + G + LL M S C PD+ TY +
Sbjct: 184 ----------------NHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSIL 227
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGD 265
I+ + LL DMR G PN + + + D ++ D
Sbjct: 228 IKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDD 287
Query: 266 CRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAY 325
C+P+ T S +++F Q N ++ ++ G N T L+DS G ++
Sbjct: 288 CKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMS 347
Query: 326 RLVDKLVEHGVSYGDCYSSLVISLI-RIKRLEEAEKLFRELLAGELKP 372
+++ + ++ S+ ++VI R L++ E LFR + + + P
Sbjct: 348 AVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFP 395
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 162/421 (38%), Gaps = 83/421 (19%)
Query: 31 LADTLYSHLHQCNGSVENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGY 90
++D + H + S ++L ++P + ++ C L +RFF++ S
Sbjct: 42 ISDAVSILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLC 101
Query: 91 RHSAY-------------MYRKASSLLGI-----------DRNPQMICDLIESYEAEGCV 126
H + + AS ++ + DR ++ LI+SY G
Sbjct: 102 SHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSA 161
Query: 127 VTVNMFREVLKLCKEAQLADVALWVLRKM------------------------------- 155
V F ++K C +++ D A+ V+RK+
Sbjct: 162 PFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKM 219
Query: 156 --EDFG---------------SRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDAC-P 197
E FG +P+ +N ++ ++G+ EM E++ REM C P
Sbjct: 220 YREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSP 279
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
++ +Y ++E C G +A + ++M+V G ++V + + GLC +
Sbjct: 280 NVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELF 339
Query: 258 XXXXKSG-DCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
G +C +TY L+ +C+ + L V M+ G A+ +T L++ LC
Sbjct: 340 RDMGLKGIEC--TCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
Query: 317 DK---GCVEEAYRLVDKLVEHGVSYG--DCYSSLVISLIRIKRLEEAEKLFRELLAGELK 371
D V EA +V V + Y +CY LV L +++ A + E++ K
Sbjct: 398 DDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFK 457
Query: 372 P 372
P
Sbjct: 458 P 458
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P T+ YN +I CK+ V+ +++L M+ PD++T+ T+I G C A R ++ +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+M G N V + + G C+ G G P+ +T+ ++ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG-VAPDYITFHCMLAGLC 126
Query: 282 ERSQWNEALNVLDRMR 297
+ + +A +L+ ++
Sbjct: 127 SKKELRKAFAILEDLQ 142
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
P +TY S+I FC++ + ++A +LD M + GC + VT TLI+ C V+ +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 328 VDKLVEHG-VSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCM 386
++ G V+ Y++L+ ++ L+ A+ L E+++ + PD + +L LC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 387 KDRVLDGFYLLDAME 401
K + F +L+ ++
Sbjct: 128 KKELRKAFAILEDLQ 142
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 36/141 (25%)
Query: 197 PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXX 256
P ITY +MI+G C R +DA +L M G
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG--------------------------- 40
Query: 257 XXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLC 316
C P+VVT+++LI +C+ + + + + M G +AN VT TLI C
Sbjct: 41 ---------CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 91
Query: 317 DKGCVEEAYRLVDKLVEHGVS 337
G ++ A L+++++ GV+
Sbjct: 92 QVGDLDAAQDLLNEMISCGVA 112
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
CK+ ++ D A +L M G PD V ++ +I CK V+ G ++ EM
Sbjct: 20 FCKQDRVDD-AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 78
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC 245
+ +TY T+I G C G + A LL +M G +P+ + + GLC
Sbjct: 79 NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%)
Query: 116 LIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCC 175
+++S ++GC V F ++ +A+ D + + +M G +TV Y +I C
Sbjct: 32 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 91
Query: 176 KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
+ GD++ + LL EM PD IT+ M+ GLC+ A+++L+D++
Sbjct: 92 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 142
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 9/233 (3%)
Query: 139 CKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPD 198
KE L A V +M G ++ +Y V +R+CC+KGDV+ E+LL EM S P
Sbjct: 315 AKEGDLVS-ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPY 373
Query: 199 LITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXX 258
T+ +I G G E + M G P+ + + + + +
Sbjct: 374 DETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILT 433
Query: 259 XXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDK 318
G P+ TY+ LI+ F E + ++AL + M +LI LC
Sbjct: 434 KSIDKGFV-PDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTC 492
Query: 319 GCVEEAYRLV----DKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLA 367
G VE + + +L+E D Y +L+ + +I A++++ E+++
Sbjct: 493 GKVEAGEKYLKIMKKRLIEPN---ADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 118/302 (39%), Gaps = 24/302 (7%)
Query: 71 PKQCQLGVRFFIWAGFQSGYRHSAYMYR-------KA-----------SSLLGIDRNPQM 112
P+ + + FF W+ RH Y KA SSLL + +
Sbjct: 90 PETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDL 149
Query: 113 ICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR 172
+ L+++YE V F +++ + + ++ V +++ D G + N +I
Sbjct: 150 VDSLLDTYEISSSTPLV--FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH 207
Query: 173 LCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSP 232
K ++ ++ P+ IT MI+ LC GR ++ LL + C P
Sbjct: 208 YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLP 267
Query: 233 NLVV-LSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALN 291
+++V S +F L K + + + Y+ ++ + + A
Sbjct: 268 SVIVNTSLVFRVLEEMRIEESMSLLKRLLMK--NMVVDTIGYSIVVYAKAKEGDLVSARK 325
Query: 292 VLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS-YGDCYSSLVISLI 350
V D M G AN + C+KG V+EA RL+ ++ E GVS Y + ++ L+
Sbjct: 326 VFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFA 385
Query: 351 RI 352
R
Sbjct: 386 RF 387
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
G + + + F E++K + + + A +L K D G PD Y+ +IR + D++
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
KL EM P + ++I GLC G+ E LK M+ PN + A+
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Query: 244 LCRSG 248
+ G
Sbjct: 524 FQKIG 528
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 5/234 (2%)
Query: 150 WVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGL 209
WV E+ P YNVV+R + ++ L EM PD TY T+I
Sbjct: 144 WV---HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSF 200
Query: 210 CNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPN 269
G + A S L+ M S +LV+ S + + L R K P+
Sbjct: 201 GKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE-LSRRLCDYSKAISIFSRLKRSGITPD 259
Query: 270 VVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVD 329
+V Y S+I + + + EA ++ M G L N V+ TL+ + EA +
Sbjct: 260 LVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFA 319
Query: 330 KLVEHGVSYGDCYSSLVISLI-RIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
++ E + +++I + ++ ++EA++LF L +++P+ ++ + +L+
Sbjct: 320 EMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 104/229 (45%), Gaps = 2/229 (0%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ + +++ G PD V YN +I + K L++EM+ + P+ ++Y T++
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
+ +A S+ +M+ C+ +L + + D + K D
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM-DIE 362
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRL 327
PNVV+Y ++++ + E + EA+++ M+ N VT T+I E+A L
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422
Query: 328 VDKLVEHGVSYGDCYSSLVISLI-RIKRLEEAEKLFRELLAGELKPDTL 375
V ++ G+ S +IS+ + +L+ A LF++L + ++ D +
Sbjct: 423 VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 471
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 15/303 (4%)
Query: 88 SGYRHSAYMYRKASSLLGIDRNPQMICDLIE-SYEAEGCVVTVNMFREVLKLCKEAQLAD 146
S Y+ R SLL + + Q L++ +E +V + VL+ A+ D
Sbjct: 113 STYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFD 172
Query: 147 VALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMI 206
+A + +M PD Y+ +I K+G + L++M DL+ Y +I
Sbjct: 173 IAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLI 232
Query: 207 E---GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKS 263
E LC+ + A S+ ++ G +P+LV +++ + ++ ++
Sbjct: 233 ELSRRLCDYSK---AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEA 289
Query: 264 GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEE 323
G PN V+Y++L+ + E ++ EAL+V M+ C + T +ID V+E
Sbjct: 290 G-VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKE 348
Query: 324 AYRLVDKL----VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSL 379
A RL L +E V Y++++ + EA LFR + +++ + + +
Sbjct: 349 ADRLFWSLRKMDIEPNVV---SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 380 LLK 382
++K
Sbjct: 406 MIK 408
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 1/198 (0%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
V++ E + VL +M+ PD V Y +V++ D +KL E+ L
Sbjct: 257 VMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLG 316
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
PD+ TY I GLC E A ++ M G PN+V + + L ++G
Sbjct: 317 LAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAK 376
Query: 255 XXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDS 314
+G R N T+ +I ++ E + A +L+ +I
Sbjct: 377 TLWKEMETNGVNR-NSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISR 435
Query: 315 LCDKGCVEEAYRLVDKLV 332
LC+KG +++A L+ LV
Sbjct: 436 LCEKGLMDQAVELLAHLV 453
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 4/213 (1%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKL--LREMSLSDA 195
LC+ ++ D A ++R M D +Y+ ++ CK D + + L ++ +
Sbjct: 189 LCRIGEV-DCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRF 247
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXX 255
P L Y ++ L GR ++ S+L M+ P+LV + + G+ +
Sbjct: 248 SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVI-ADEDYPKAD 306
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
P+V TY I C+++ AL ++ M G N VT LI +L
Sbjct: 307 KLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 366
Query: 316 CDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVIS 348
G + A L ++ +GV+ ++IS
Sbjct: 367 VKAGDLSRAKTLWKEMETNGVNRNSHTFDIMIS 399
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXX 257
+L +Y MI LC AGR ++Y+ L++M+ G +P+
Sbjct: 396 ELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPD------------------------ 431
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
V Y +LI++ C+ A + D M GC N T LI L +
Sbjct: 432 ------------VSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
+G EE+ RL DK++E G+ + Y SL+ L + ++E A ++FR+ + + K T
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVT 537
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK ++ + + L++M+ G PD +YN +I CCK + +KL EM +
Sbjct: 407 LCKAGRVRE-SYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKM 465
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR 246
+L TY +I L G E++ L M G P+ + ++ +GLC+
Sbjct: 466 NLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCK 514
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 73/200 (36%), Gaps = 38/200 (19%)
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
Y+++I CK G V L+EM PD+ Y +IE C A A L +M
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMF 459
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
V GC NL TY LI+ E +
Sbjct: 460 VEGCKMNL------------------------------------TTYNVLIRKLSEEGEA 483
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE--HGVSYGDCYSS 344
E+L + D+M G + +LI+ LC + +E A + K +E H S
Sbjct: 484 EESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSE 543
Query: 345 LVISLIRIKRLEEAEKLFRE 364
V++L EA +L RE
Sbjct: 544 FVLNLCSNGHSGEASQLLRE 563
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 125/332 (37%), Gaps = 38/332 (11%)
Query: 46 VENSLSKI--KPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSGYRHSAYMYRKASSL 103
+E SL + + + V +V+ L + FF WA Q GY H + Y
Sbjct: 32 IEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKS 91
Query: 104 LGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPD 163
L + R + L + ++ ++ +++R ++ + A A WVL E F +
Sbjct: 92 LSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLE--EAFST--- 146
Query: 164 TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLK 223
G+++ D C L+ GL + G + A L
Sbjct: 147 -------------------GQEI-----HPDVCNRLLA------GLTSDGCYDYAQKLFV 176
Query: 224 DMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCER 283
MR G S N + CRS K+ + ++ S C+
Sbjct: 177 KMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKC 236
Query: 284 SQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS-YGDCY 342
S+ +A +L+ +R C + + + ++ G + E ++ K + GV+ Y
Sbjct: 237 SREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDY 296
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDT 374
+ ++ LI KRL EA+++ +++G+ D
Sbjct: 297 RAFILDLISAKRLTEAKEVAEVIVSGKFPMDN 328
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK+ L A+ + M D G+ P+ V+Y V+ CK +E +++ R+M + P
Sbjct: 141 LCKDG-LVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAP 199
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR 246
+ +Y +++GL N +DA + +M G SPN+ + D LCR
Sbjct: 200 NAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 215 PEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYT 274
PED+ + K M+ G PN V A+ DGLC+ G G P VV YT
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTI-PEVVIYT 170
Query: 275 SLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEH 334
+++++FC+ + +A + +M+ G N + L+ L + +++A +++E
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLES 230
Query: 335 GVSYG-DCYSSLVISLIRIKRLEEAE 359
G S + LV +L R+K +E+A+
Sbjct: 231 GHSPNVPTFVELVDALCRVKGVEQAQ 256
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
E +++ ++M P+ + M++GLC G ++A L MR G P +V+ +A+
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
+ C++ +G PN +Y L+Q + ++A+ M G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNG-IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
N T L+D+LC VE+A +D L + G +
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
LCK+ L A+ + M D G+ P+ V+Y V+ CK +E +++ R+M + P
Sbjct: 141 LCKDG-LVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAP 199
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR 246
+ +Y +++GL N +DA + +M G SPN+ + D LCR
Sbjct: 200 NAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 215 PEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYT 274
PED+ + K M+ G PN V A+ DGLC+ G G P VV YT
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTI-PEVVIYT 170
Query: 275 SLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEH 334
+++++FC+ + +A + +M+ G N + L+ L + +++A +++E
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLES 230
Query: 335 GVSYG-DCYSSLVISLIRIKRLEEAE 359
G S + LV +L R+K +E+A+
Sbjct: 231 GHSPNVPTFVELVDALCRVKGVEQAQ 256
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 181 EMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAI 240
E +++ ++M P+ + M++GLC G ++A L MR G P +V+ +A+
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 241 FDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG 300
+ C++ +G PN +Y L+Q + ++A+ M G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNG-IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 301 CLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS 337
N T L+D+LC VE+A +D L + G +
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 17/196 (8%)
Query: 158 FGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPED 217
F D + + +I + K G+V K+ ++ D L+ + MI G N + ++
Sbjct: 146 FSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQD----LVVFNAMISGYANNSQADE 201
Query: 218 AYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
A +L+KDM++ G P+++ +A+ G + G +P+VV++TS+I
Sbjct: 202 ALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDG-YKPDVVSWTSII 260
Query: 278 QSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLID-----SLCDKGCVEEAYRLVDKLV 332
Q +A + +M G N T TL+ + G Y +V L
Sbjct: 261 SGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLE 320
Query: 333 EHGVS-------YGDC 341
+HG YG C
Sbjct: 321 DHGFVRSALLDMYGKC 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 109/278 (39%), Gaps = 53/278 (19%)
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
AD AL +++ M+ G +PD + +N +I + E ++L M L PD++++ +
Sbjct: 199 ADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTS 258
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD-----GLCRSGSXXXXXXXXXX 259
+I GL + + E A+ K M HG PN + + + G
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG 318
Query: 260 XXKSGDCRP-------------------------NVVTYTSLIQSFCERSQWNEALNVLD 294
G R VT+ S+I + ++A+ + D
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFD 378
Query: 295 RMRAFGCLANHVTAFTLIDSLCDKG-----------CVEEAYRLVDKLVEHGVSYGDCYS 343
+M A G +H+T FT I + C ++ YR+V +L EH Y+
Sbjct: 379 QMEATGEKLDHLT-FTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRL-EH-------YA 429
Query: 344 SLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+V L R +L EA ++ + A ++PD LL
Sbjct: 430 CMVDLLGRAGKLVEAYEMIK---AMRMEPDLFVWGALL 464
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 161 RPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
RPD V Y +I KKG + +L R M + PD+ +I+ LC R +A
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCR-SGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQS 279
+ +++ G PN+V +++ LC+ + K G C PN VT++ L++
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK- 397
Query: 280 FCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYG 339
+ +RS+ + VL+RM C + L+ L + EE R + +E
Sbjct: 398 YSQRSK--DVDIVLERMAKNKCEMTS-DLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 340 D--CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLD 392
D Y+ + L ++ EA F+E+++ + P+ + +LL + K RV D
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP-RTEMLLNQNKTKPRVED 508
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 170/456 (37%), Gaps = 70/456 (15%)
Query: 2 LHFLNFRFSPCLHKLKTLP--FSSQKMGMASLADTLYSHLHQCNGSVENSLSKIKPK--- 56
HFL F L P F+ K ++L +++ + GS + +I K
Sbjct: 48 FHFLGTHFLHSLGAPDKFPNRFNDDKDKQSAL--DVHNIIKHHRGSSPEKIKRILDKCGI 105
Query: 57 -LDSQCVIQVVSRCCPKQ------CQLGVRFFIWAGFQSGYRHSAYMYRKASSLLGIDRN 109
L + V++VV+R QL V+ QS + S+ +Y + +LG R
Sbjct: 106 DLTEELVLEVVNRNRSDWKPAYILSQLVVK-------QSVHLSSSMLYNEILDVLGKMRR 158
Query: 110 PQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNV 169
+ + + V + +L A D A+ V + ++FG D V ++
Sbjct: 159 FEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHG 218
Query: 170 VIRLCCKKGDVEMGEKLL----RE---------MSLSDAC-------------------- 196
++ C+ VE E L RE M L+ C
Sbjct: 219 LLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKC 278
Query: 197 -PDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXX 255
PD+++Y TMI L G+ A L + M +P++ + + + D LC
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFG--CLANHVTAFTLID 313
+ G PNVVTY SL++ C+ + + +++ M G C N VT L+
Sbjct: 339 VFREISEKG-PDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK 397
Query: 314 SLCDKGCVEEAYRLVDKLVEHGVS-----YGDCYSSLVISLIRIKRLEEAEKLFRELLAG 368
+ + VD ++E D Y+ + ++ + E+ +++ E+
Sbjct: 398 -------YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERS 450
Query: 369 ELKPDTLASSLLLKELCMKDRVLDGFYLLDAMENMG 404
L PD ++ + L K ++ + M + G
Sbjct: 451 GLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Query: 138 LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACP 197
L K+ +L A+ + R M D PD + N VI C K + ++ RE+S P
Sbjct: 292 LTKKGKLGK-AMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDP 350
Query: 198 DLITYITMIEGLCNAGRPEDAYSLLKDMRVHG--CSPNLVVLSAIFDGLCRSGSXXXXXX 255
+++TY ++++ LC R E + L+++M + G CSPN V S + RS
Sbjct: 351 NVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLE 410
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSL 315
C Y + + + + + + + M G + T I L
Sbjct: 411 RMA----KNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGL 466
Query: 316 CDKGCVEEAYRLVDKLVEHGV 336
KG + EA +++ G+
Sbjct: 467 HTKGKIGEALSYFQEMMSKGM 487
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 9/179 (5%)
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLC--RSGSXXXXXXXX 257
+++ + I L GR +A DM + G PN + A+ G SGS
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 258 XXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCD 317
K G R +V+ T++I + +R ++ +A V D M N VT T+ID
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMED----KNSVTWNTMIDGYMR 152
Query: 318 KGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLA 376
G V+ A ++ DK+ E + +++++ ++ EEA FRE+ +KPD +A
Sbjct: 153 SGQVDNAAKMFDKMPERDLI---SWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 28/237 (11%)
Query: 81 FIWAGFQSGYRHSAYMYR-----KASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREV 135
F W SG H+ Y+ + L G+ N I + + A C+ +N EV
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI---MSAVSACSCLKVINQGSEV 374
Query: 136 LKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDA 195
+ + D D ++ N ++ + K G +E K+ +
Sbjct: 375 HSIAVKMGFID----------------DVLVGNSLVDMYSKCGKLEDARKVFDSVK---- 414
Query: 196 CPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXX 255
D+ T+ +MI G C AG AY L M+ PN++ + + G ++G
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMD 474
Query: 256 XXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLI 312
K G + N T+ +I + + + +EAL + +M+ + N VT +L+
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 105/257 (40%), Gaps = 11/257 (4%)
Query: 125 CVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGE 184
C+ N V C E D A R+M + D + +N V+ C+ G E
Sbjct: 215 CLRVSNSILAVYAKCGEL---DFATKFFRRMRE----RDVIAWNSVLLAYCQNGKHEEAV 267
Query: 185 KLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGL 244
+L++EM P L+T+ +I G G+ + A L++ M G + ++ +A+ GL
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 245 CRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLAN 304
+G +G PN VT S + + N+ V G + +
Sbjct: 328 IHNGMRYQALDMFRKMFLAG-VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD 386
Query: 305 HVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRE 364
+ +L+D G +E+A ++ D + V ++S++ + +A +LF
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY---TWNSMITGYCQAGYCGKAYELFTR 443
Query: 365 LLAGELKPDTLASSLLL 381
+ L+P+ + + ++
Sbjct: 444 MQDANLRPNIITWNTMI 460
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 134/312 (42%), Gaps = 21/312 (6%)
Query: 97 YRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFRE-VLKLCKEAQ-LADVALWVLRK 154
+ K +LG+ +IC +V +RE V K+C E Q L+ ++L
Sbjct: 854 WMKVEEVLGLMVRKNIIC-------------SVKSYREYVRKMCLEPQSLSAISLKEFLL 900
Query: 155 MEDFGSRPD-TVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAG 213
+ + S P ++YN++I + + K+L EM PD T+ ++ G ++
Sbjct: 901 LGE--SNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSA 958
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
+ L M G PN L A+ LC +G G + V
Sbjct: 959 DYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQ 1018
Query: 274 TSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
T ++++ + + +A + L R+ G +A + +I L D+G ++ A L++ +++
Sbjct: 1019 TKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYD--NIIKKLSDRGNLDIAVHLLNTMLK 1076
Query: 334 H-GVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLD 392
+ + Y S++ L+R +L++A E++ L P S L+ + C +VL+
Sbjct: 1077 NQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLE 1136
Query: 393 GFYLLDAMENMG 404
L+ +M +G
Sbjct: 1137 SERLIKSMVGLG 1148
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%)
Query: 152 LRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCN 211
+ ++E G + D V + ++I CC +GD++ L E+ PD+ +Y ++ GL
Sbjct: 346 MEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFR 405
Query: 212 AGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
G + + +L +M+ +G +L + G C++
Sbjct: 406 KGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKA 441
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 9/255 (3%)
Query: 146 DVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITM 205
D+ V RK E G +Y+ + R G + E++ + M + PD ITY +
Sbjct: 352 DLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQL 411
Query: 206 IEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG- 264
+ GLC A R E+A +L M GC P++ + + G C++ + G
Sbjct: 412 VFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
Query: 265 DCRPNVVTYTSLIQSFCERSQWNEA-LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEE 323
D N++ LI F +++ A + +++ ++ T LID L EE
Sbjct: 472 DIDSNLLDV--LIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEE 529
Query: 324 AYRLVDKLVEHGV-SYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
A L+ + + +Y + + L + LE+A+K F ++L+ + P A +++
Sbjct: 530 ALDLLQMMKKQNYPAYAEAFDGY---LAKFGTLEDAKK-FLDVLSSKDSPSFAAYFHVIE 585
Query: 383 ELCMKDRVLDGFYLL 397
+ R+ D LL
Sbjct: 586 AFYREGRLTDAKNLL 600
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 134/320 (41%), Gaps = 9/320 (2%)
Query: 46 VENSLSKIKPKLDSQCVIQVVSRCCPKQCQLGVRFFIWAGFQSG---YRHSAYMYRKASS 102
VE L ++K L VI+V+ + + FF W G Y+HS Y A
Sbjct: 213 VERELQEMKLVLSDNFVIRVLKELREHPLK-ALAFFHWVGGGGSSSGYQHSTVTYNAALR 271
Query: 103 LLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRP 162
+L + +++ + G + ++ + +V + +++++ + + M D +P
Sbjct: 272 VLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKP 331
Query: 163 DTVMYNVVIRLCC--KKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYS 220
++++R D+++ ++ R+ + Y + L + GR ++A
Sbjct: 332 SIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEE 391
Query: 221 LLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSF 280
+ K MR G P+ + S + GLC++ G C P++ T+T LIQ
Sbjct: 392 ITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQG-CFPDIKTWTILIQGH 450
Query: 281 CERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG--VSY 338
C+ ++ ++AL M G + LID E A + ++V++ +
Sbjct: 451 CKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPW 510
Query: 339 GDCYSSLVISLIRIKRLEEA 358
Y L+ L++IK+ EEA
Sbjct: 511 QSTYKLLIDKLLKIKKSEEA 530
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 35/237 (14%)
Query: 129 VNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIR--LCCKKGDVEMGEKL 186
V ++ VL C + + + A WVL++++ G +P V Y +++ L C+K + + +
Sbjct: 593 VVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYN--LVHEF 650
Query: 187 LREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHG---------------CS 231
R+M S + P+ + Y ++ L G+ ++A ++DM G CS
Sbjct: 651 FRKMQKS-SIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 232 P-------------NLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQ 278
N VVL I + + ++ + + +P VVTYT LIQ
Sbjct: 710 AGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVAN-KPLVVTYTGLIQ 768
Query: 279 SFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
+ + A + D+M+ C N VT ++ + G EEA L K+ E G
Sbjct: 769 ACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDG 824
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 99/251 (39%), Gaps = 4/251 (1%)
Query: 124 GCVVTVNMFREVLK-LCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEM 182
GC +V F L+ L L + ++ +G D V +N+ I+ C+ G ++
Sbjct: 136 GCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDG 195
Query: 183 GEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD 242
+REM S PD++TY T+I L R L M + GC PNL +
Sbjct: 196 AYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQ 255
Query: 243 GLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
L K P+ +TY +I+ F + A V M G
Sbjct: 256 FLVNRRRAWDANDLLLLMPKL-QVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYK 314
Query: 303 ANHVTAFTLIDSLCDKGCVEEAYRL-VDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKL 361
N T+I LC G + AY + D + + D L+ L++ +L++A+ +
Sbjct: 315 PNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSI 374
Query: 362 FRELLAGELKP 372
EL+ + P
Sbjct: 375 M-ELVHRRVPP 384
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 137/334 (41%), Gaps = 59/334 (17%)
Query: 83 WAGFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAE-GCVVTVNMFREVLKLCKE 141
WA SG+ Y+ R+A L +M+ D E+ V+TV L KE
Sbjct: 519 WASMISGFNEYGYL-REAIGLFS-----EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 142 AQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDL-- 199
+ + + M D GS ++ + K G +++ ++ D P+L
Sbjct: 573 IHGYTLRAGIDKGM-DLGS--------ALVNMYSKCGSLKLARQVY------DRLPELDP 617
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFD----------------- 242
++ ++I G G +D + L +DM + G + + +S+I
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 243 ----GLCRSGSXXXXXXXXXXXXKSGD--CR-------PNVVTYTSLIQSFCERSQWNEA 289
GLC S S D C+ P+++ +T+LI S+ + + NEA
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEA 737
Query: 290 LNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV-EHGVSYGD-CYSSLVI 347
L V + M+ G + VT ++ + G VEE+Y ++ +V ++G+ + Y +V
Sbjct: 738 LQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVD 797
Query: 348 SLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+L R RL EAE + +KPD L LL
Sbjct: 798 ALGRSGRLREAESFINNM---HIKPDALVWGTLL 828
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 6/257 (2%)
Query: 131 MFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM 190
++ +L C WV ++ G RP+ Y + + + + G + R+M
Sbjct: 343 VYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKM 402
Query: 191 SLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSX 250
S P ITY ++ L G+ E+A ++DM G V + LC +G
Sbjct: 403 KSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRW 462
Query: 251 XXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFT 310
+ +CRP +T+T LI + ++ + + M+ C N TA
Sbjct: 463 CDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKD-KCDPNIGTANM 521
Query: 311 LIDSLCDKGCVEEAYRLVDKLVE----HGVSYGDCYSSLVISLIRIKRLEEAEKLFREL- 365
++ EA L +++V H V YS ++ + R + E E +++ +
Sbjct: 522 MLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMV 581
Query: 366 LAGELKPDTLASSLLLK 382
L+G T +S+L++
Sbjct: 582 LSGYQMDQTKHASMLIE 598
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 75/151 (49%)
Query: 97 YRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKME 156
Y + G +++ + I++ + +G V++ + +L + + + +L++M+
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 157 DFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPE 216
S PD YN++I + ++G ++ +L+E+ S PDL +Y T+I+ G E
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVE 855
Query: 217 DAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
+A L+K+MR P+ V + + L R+
Sbjct: 856 EAVGLVKEMRGRNIIPDKVTYTNLVTALRRN 886
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 104/263 (39%), Gaps = 45/263 (17%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
+ V++NV+I + GD + L +M ++++ TMI G G +DA +
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRS----VVSWNTMISGYSLNGFFKDAVEVF 262
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSG----------------DC 266
++M+ PN V L ++ + R GS SG C
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 267 --------------RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLI 312
R NV+T++++I F Q +A++ +MR G + V L+
Sbjct: 323 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 382
Query: 313 DSLCDKGCVEEAYRLVDKLV-----EHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLA 367
+ G VEE R ++V E + + Y +V L R L+EAE+ +L
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEH---YGCMVDLLGRSGLLDEAEEF---ILN 436
Query: 368 GELKPDTLASSLLLKELCMKDRV 390
+KPD + LL M+ V
Sbjct: 437 MPIKPDDVIWKALLGACRMQGNV 459
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 130/313 (41%), Gaps = 22/313 (7%)
Query: 90 YRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEG-CVVTVNMFREVLK-----LCKEA- 142
Y + ++ + +G++ +P C ++E++E G V +F+E L KE+
Sbjct: 189 YSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESG 248
Query: 143 --------QLADV-----ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLRE 189
LA AL VL +M+D G + +Y+++IR + +V + EKL +E
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 190 MSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGS 249
D + ++ G E ++ MR +L AI +G +
Sbjct: 309 AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 250 XXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAF 309
K +C VTY I ++C ++N+A + D M G V
Sbjct: 369 FAEAVKVYEWAMKE-ECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYS 427
Query: 310 TLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAG 368
++D + +A RL+ K+ + G Y+SL+ R L AEK+++E+
Sbjct: 428 NIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRA 487
Query: 369 ELKPDTLASSLLL 381
++ PD ++ + ++
Sbjct: 488 KVLPDKVSYTSMI 500
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMR 226
+NV++ K G++E +++ EM D +++ TMI G+ + G +++ ++++
Sbjct: 206 WNVMLAGYIKAGELESAKRIFSEMPHRDD----VSWSTMIVGIAHNGSFNESFLYFRELQ 261
Query: 227 VHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQW 286
G SPN V L+ + +SGS K+G V +LI +
Sbjct: 262 RAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI-VSVNNALIDMYSRCGNV 320
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY-GDCYSSL 345
A V + M+ C+ V+ ++I L G EEA RL +++ +GV+ G + SL
Sbjct: 321 PMARLVFEGMQEKRCI---VSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 346 VISLIRIKRLEEAEKLFREL 365
+ + +EE E F E+
Sbjct: 378 LHACSHAGLIEEGEDYFSEM 397
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 14/260 (5%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
++K+ +A++ AL V M+ G P+T ++ +I C G VE L EM S
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASG 439
Query: 195 ACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXX 254
P+ + ++ A + + A+ L + + + +L + G S +
Sbjct: 440 CEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNN 499
Query: 255 XXXXXXXKSGDC-----------RPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
++ + +P TY L+++ C + + ++D M++ G
Sbjct: 500 GPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CG-TDYYRGKELMDEMKSLGLSP 557
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLF 362
N +T TLID G VE A R++ + G Y++ + K L+ A LF
Sbjct: 558 NQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLF 617
Query: 363 RELLAGELKPDTLASSLLLK 382
E+ ++KP+ + + LLK
Sbjct: 618 EEMRRYQIKPNWVTYNTLLK 637
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 158 FGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPED 217
F +P T YN++++ C D G++L+ EM P+ IT+ T+I+ +G E
Sbjct: 520 FCFKPTTATYNILLKACGT--DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEG 577
Query: 218 AYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLI 277
A +L+ M G P++V + +C + +PN VTY +L+
Sbjct: 578 AVRILRTMHSAGTRPDVVAYTTAIK-ICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLL 636
Query: 278 QSFCERSQWNEALNV------LDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKL 331
++ RS++ L V MR G N LI+ C+ G ++E + DK+
Sbjct: 637 KA---RSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE-GVIQENGQSQDKI 692
Query: 332 VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
+ GD V LI E+ +E AG L D
Sbjct: 693 SDQE---GDNAGRPVSLLI-----EKVATHMQERTAGNLAID 726
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
+ ++ +C + + A+ +LR M G+RPD V Y I++C + +++ L EM
Sbjct: 562 WSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMR 621
Query: 192 LSDACPDLITYITMIEGLCNAG---RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG 248
P+ +TY T+++ G ++ +DMR G PN L + + C
Sbjct: 622 RYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGV 681
Query: 249 SXXXXXXXXXXXXKSGD--CRPNVVTYTSLIQSFCERSQWNEALNV 292
+ GD RP + + ER+ N A+++
Sbjct: 682 IQENGQSQDKISDQEGDNAGRPVSLLIEKVATHMQERTAGNLAIDL 727
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 113/277 (40%), Gaps = 29/277 (10%)
Query: 112 MICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVI 171
++C +I + +G +V+V E K Q+ D P+ + +I
Sbjct: 234 LLCRIIHGFGKKGDMVSVMTAYEACK-----QILDT--------------PNMYICRTMI 274
Query: 172 RLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL--LKDMRVHG 229
+C GD + ++ + P+ I +I L N + Y+L K+M++
Sbjct: 275 DVCGLCGDYVKSRYIYEDLLKENIKPN----IYVINSLMNVNSHDLGYTLKVYKNMQILD 330
Query: 230 CSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK---SGDCRPNVVTYTSLIQSFCERSQW 286
+ ++ + + C +G + SG + + TY ++I+ F + W
Sbjct: 331 VTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMW 390
Query: 287 NEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVS-YGDCYSSL 345
AL V D M++ G N T +LI + + G VE+A L ++++ G C++ L
Sbjct: 391 KWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNIL 450
Query: 346 VISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLK 382
+ + + + + A +LF+ + A ++ K
Sbjct: 451 LHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSK 487
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 141 EAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLS-DACPDL 199
E + D L +L++M+++ +PD + YN V+ + + G V +L M ++
Sbjct: 189 ETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNI 248
Query: 200 ITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXX 259
ITY T++ G+ A R + + +M G P+L+ +A+ D L RSG+
Sbjct: 249 ITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGN-VKESLRLFD 307
Query: 260 XXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCL 302
K RP+V Y +LI + + AL + D ++ L
Sbjct: 308 EMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSSL 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 101/232 (43%), Gaps = 2/232 (0%)
Query: 107 DRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDF-GSRP-DT 164
D N DL++S + + + +++F+ +L E ++ V R++ G P +
Sbjct: 83 DGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVLILPGKEPLSS 142
Query: 165 VMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKD 224
Y + R D LL+E+S S LI +I + + +LK+
Sbjct: 143 DCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKE 202
Query: 225 MRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERS 284
M+ C P+++ +++ D L R+G + N++TY +++ +
Sbjct: 203 MKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKAC 262
Query: 285 QWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGV 336
+++ L + + M G + ++ +IDSL G V+E+ RL D++ + +
Sbjct: 263 RFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQI 314
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 4/219 (1%)
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
E L+ M PD IT+ ++ G G+PE A ++ M+ G +PN+V +AIF G
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
++G+ + G PN T ++L++ S + V +
Sbjct: 371 CSKNGNFRNALKVFIKMQEEG-VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 304 NHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFR 363
+ A L+D G ++ A + + ++ +C +++ R EE F
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC---MLMGYAMFGRGEEGIAAFS 486
Query: 364 ELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAMEN 402
+L ++PD + + +L V +G+ D M +
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 125/332 (37%), Gaps = 61/332 (18%)
Query: 85 GFQSGYRHSAYMYRKASSLLGIDRNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQL 144
GF G + Y+ R LG++ N M LI Y G + + R+V K+ L
Sbjct: 104 GFAEGRQIHGYVLR-----LGLESNVSMCNSLIVMYSRNG---KLELSRKVFNSMKDRNL 155
Query: 145 ADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYIT 204
+ +N ++ K G V+ LL EM + PD++T+ +
Sbjct: 156 SS--------------------WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNS 195
Query: 205 MIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSG---------------- 248
++ G + G +DA ++LK M++ G P+ +S++ + G
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 249 ---SXXXXXXXXXXXXKSG------------DCRPNVVTYTSLIQSFCERSQWNEALNVL 293
K+G D + N+V + SL+ +A ++
Sbjct: 256 LWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK-NIVAWNSLVSGLSYACLLKDAEALM 314
Query: 294 DRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC-YSSLVISLIRI 352
RM G + +T +L G E+A ++ K+ E GV+ ++++ +
Sbjct: 315 IRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKN 374
Query: 353 KRLEEAEKLFRELLAGELKPDTLASSLLLKEL 384
A K+F ++ + P+ S LLK L
Sbjct: 375 GNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 108/256 (42%), Gaps = 9/256 (3%)
Query: 132 FREVLKLCKEA----QLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLL 187
FR++ + KE Q+ D W+ ++ RP V+Y +V+RL + G ++M E+
Sbjct: 155 FRDMCVVLKEQRGWRQVRDFFSWMKLQL---SYRPSVVVYTIVLRLYGQVGKIKMAEETF 211
Query: 188 REMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRS 247
EM PD + TM+ GR + K ++ + V + + L +
Sbjct: 212 LEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKK 271
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
+ G PN TYT ++ S+ ++ EAL M++ G + VT
Sbjct: 272 SFHGKVIDLWLEMVEEG-VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVT 330
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISL-IRIKRLEEAEKLFRELL 366
++I G E+A L + + G+ + + ++SL + + +A LF ++
Sbjct: 331 YSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADME 390
Query: 367 AGELKPDTLASSLLLK 382
++ D + L+++
Sbjct: 391 RNKIPADEVIRGLIIR 406
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
Query: 204 TMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKS 263
+MI+ G EDAY L + GC P V +S + + L G +
Sbjct: 709 SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK 768
Query: 264 GDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGC-VE 322
+ + V Y +LI++ E + A + +RM G + T T+I S+ +G ++
Sbjct: 769 -NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI-SVYGRGLQLD 826
Query: 323 EAYRLVDKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLL 381
+A + G+ + Y+++++ + ++ EA LF E+ +KP T + ++++
Sbjct: 827 KAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Query: 382 KELCMKDRVLDGF-YLLDAMENMG 404
K +C R+ LL AME G
Sbjct: 887 K-ICATSRLHHEVDELLQAMERNG 909
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 109 NPQMICDLIESYEAEGCV-VTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMY 167
+P+ + ++ EG V MF L K+ + + AL + +++D PD V +
Sbjct: 180 DPKNLQEIFHKMRTEGFTNEAVKMFD---ALSKDGRTHE-ALELFSQIKDKNRMPDVVAH 235
Query: 168 NVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRP-EDAYSLLKDMR 226
++ G + K+ M S P+ TY +I+GL G+ +DA L +M
Sbjct: 236 TAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMM 295
Query: 227 VHGCSPNLVVLSAIFDGLCRSG 248
+G SPN +A+F+ R G
Sbjct: 296 GNGMSPNAATYTAVFEAFVREG 317
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 51/131 (38%)
Query: 175 CKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNL 234
K G +L ++ + PD++ + ++E NAG+ ++ + M G SPN
Sbjct: 208 SKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNA 267
Query: 235 VVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLD 294
S + GL G PN TYT++ ++F + A +L
Sbjct: 268 YTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQ 327
Query: 295 RMRAFGCLANH 305
M+ G + +
Sbjct: 328 EMKGKGFVPDE 338
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 125/304 (41%), Gaps = 20/304 (6%)
Query: 115 DLIESYEAEGCVVTVNMFREVLKLCKEA----QLADVALWVLRKMEDFGSRPDTVMYNVV 170
DL E+ + N+ +V++ CK +L W + + GS +N V
Sbjct: 53 DLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSL---GSSLHDKEFNYV 109
Query: 171 IRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGC 230
+R+ +K D + LL ++ + D T+ + E L G+ EDA + K + C
Sbjct: 110 LRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSC 169
Query: 231 SPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXK--SGDCRPNVVTYTSLIQSFCERSQWNE 288
+ ++AI LC G SG+ + Y SL+ + + E
Sbjct: 170 PQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGN---ELSVYRSLLFGWSVQRNVKE 226
Query: 289 ALNVLDRMRAFGCLANHVTAFTLIDSLCDK-------GCVEEAYRLVDKLVEHGVSYGD- 340
A V+ M++ G + +L+ LC++ G V EA ++ ++ + +
Sbjct: 227 ARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSM 286
Query: 341 CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAM 400
Y+ L+ L R +R+ E+ ++ ++ PDT + +++ L + R G ++D M
Sbjct: 287 SYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEM 346
Query: 401 ENMG 404
G
Sbjct: 347 IERG 350
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
FR +++LC + + A +L +++F P++ M+N ++ ++ +V ++++M
Sbjct: 446 FRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVSSALMVVKQMK 505
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYS-LLKDMRVHGCSPNLVVLSAIFDGLCRSGSX 250
+ PD IT+ +I N EDA + ++M+ G + ++ D SG
Sbjct: 506 EAGVKPDSITFGYLI----NNCTQEDAITKYYEEMKQAGVQATKRIYMSLIDAYAASGK- 560
Query: 251 XXXXXXXXXXXKSGDCRPNVVTYTS------LIQSFCERSQWNEALNVLDRMRAFGCLAN 304
K P+V LI + R +W +AL++ + MR C +
Sbjct: 561 -------FEKAKQVLVDPDVPAINQNELKSVLISALASRGKWADALHIYEEMRKAECHVD 613
Query: 305 HVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCYSSLVISLIRIKR 354
+ +LI+ KG + +L D L + S+ D + +++ +R K+
Sbjct: 614 PKSIISLIEYSDSKGELSTLVQLADDL-QDDTSWIDGFFRMILFAVRNKK 662
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
Query: 167 YNVVIRLCCKKGDVEMGEKLLREMSLSDACP-DLITYITMIEGLCNAGRPEDAYSLLKDM 225
YN+ IR K G + L+++S + C ++ Y +M+ L + Y +L +M
Sbjct: 324 YNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEM 383
Query: 226 RVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQ 285
V G SPN ++A C++G + G P ++Y LI + C
Sbjct: 384 MVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFA-PTAMSYNYLIHTLCANES 442
Query: 286 WNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
+A +VL G T TL ++LC KG + A LV
Sbjct: 443 VEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV 485
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 5/184 (2%)
Query: 153 RKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA 212
R++ D G++ D V +NV+I GDVE L +M SD P T++ ++ +A
Sbjct: 588 RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA 647
Query: 213 GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVT 272
G E L M + PNL S + D L RSG+ S P+ V
Sbjct: 648 GLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFS----PDGVI 703
Query: 273 YTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV 332
+ +L+ S ++ + + +R A N L + G EEA R + +
Sbjct: 704 WGTLLSSCMTHGEFEMGIRMAERAVA-SDPQNDGYYIMLANMYSAAGKWEEAERAREMMR 762
Query: 333 EHGV 336
E GV
Sbjct: 763 ESGV 766
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 1/186 (0%)
Query: 151 VLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLC 210
+L KMED G +P +N V+ C K + ++ + M + P +I+Y ++ L
Sbjct: 445 LLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALE 504
Query: 211 NAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNV 270
++A+ + M G PNL + + L G P+V
Sbjct: 505 KGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKG-IEPSV 563
Query: 271 VTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDK 330
VT+ ++I A RM++ N +T LI++L + AY L K
Sbjct: 564 VTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVK 623
Query: 331 LVEHGV 336
G+
Sbjct: 624 AQNEGL 629
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
D + +N +I +KG + G + +M + PD T+ ++ R E
Sbjct: 173 DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAH 232
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
M N++V SA+ D + S NV+T+TSLI +
Sbjct: 233 AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-----NVITWTSLISGYGY 287
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSY---- 338
+ +E L ++M+ GC N VT F ++ + C+ G LVDK EH S
Sbjct: 288 HGKVSEVLKCFEKMKEEGCRPNPVT-FLVVLTACNHGG------LVDKGWEHFYSMKRDY 340
Query: 339 -----GDCYSSLVISLIRIKRLEEA 358
G Y+++V +L R RL+EA
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 2/149 (1%)
Query: 148 ALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIE 207
A+ V R+M DF PDT+ +N ++ C + EKL EM + PD TY +++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 208 GLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCR 267
G+ ++ + K M PNL V + + D L ++G +
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK--LK 486
Query: 268 PNVVTYTSLIQSFCERSQWNEALNVLDRM 296
+ Y ++++ E + +E L ++D M
Sbjct: 487 MDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 142 AQLADVALWVLRKMEDF----GSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSL----S 193
AQL L ++ F G P+ + YN++ + DV E L L +
Sbjct: 139 AQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYL---DVRKPEIALEHYKLFIDNA 195
Query: 194 DACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCR-SGSXXX 252
P + T+ +++GL + E A + +DM V G + VV S + G + S +
Sbjct: 196 PLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGV 255
Query: 253 XXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQ-------WNEALNVLDRMRAFGCLANH 305
K G + V Y L++ + + + EA+ ++R N+
Sbjct: 256 LKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNY 315
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLV-EH------GVSYGDCYSSLVISLIRIKRLEEA 358
V +++L + G +EA +L D + EH V+ G ++ +V + EEA
Sbjct: 316 V-----LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLG-TFNVMVNGYCAGGKFEEA 369
Query: 359 EKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
++FR++ + PDTL+ + L+ +LC + + + L ME
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEME 412
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
N+ T+ ++ +C ++ EA+ V +M F C + ++ L++ LCD + EA +L
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 329 DKLVEHGVSYGD-CYSSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMK 387
++ E V + Y L+ + + +++E ++ ++ L+P+ + L +L
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Query: 388 DRVLDGFYLLDAM 400
++ D D M
Sbjct: 469 GKLDDAKSFFDMM 481
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 131 MFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREM 190
++ +L E+ L+ AL + M+ G P+ + +N++I + G V+ + + +M
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 191 SLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPN 233
S P+LI++ TM+ G+ G E+A L+ M+ G PN
Sbjct: 503 QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 161 RPDTVMYNVVIRLCCKKG-DVEMGEKLLREMSLSDAC-PDLITYITMIEGLCNAGRPEDA 218
+ D V +N ++ KKG D +L EM++ + PD +T +++I G N G
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 219 ---YSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTS 275
+ L+ +++ G + + SA+ D C+ G + +V +TS
Sbjct: 388 RWVHGLVIRLQLKG---DAFLSSALIDMYCKCGIIERAFMVFKTATEK-----DVALWTS 439
Query: 276 LIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHG 335
+I +AL + RM+ G N+VT ++ + G VEE + + + +
Sbjct: 440 MITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKD-- 497
Query: 336 VSYG-----DCYSSLVISLIRIKRLEEAEKLFRE 364
+G + Y SLV L R R+EEA+ + ++
Sbjct: 498 -KFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQK 530
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 107/280 (38%), Gaps = 32/280 (11%)
Query: 96 MYRKASSLLGIDRNP--QMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLR 153
+ R+A LLG + P C+LI+ +C + + + V
Sbjct: 69 LLREAVQLLGRAKKPPASTYCNLIQ-------------------VCSQTRALEEGKKVHE 109
Query: 154 KMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAG 213
+ G P V++N ++R+ K G + K+ EM D C ++ M+ G G
Sbjct: 110 HIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLC----SWNVMVNGYAEVG 165
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
E+A L +M + +A+ G + + + RPN+ T
Sbjct: 166 LLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTV 221
Query: 274 TSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
+ + + + + G ++ V +L+D GC++EA + DK+VE
Sbjct: 222 SIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE 281
Query: 334 HGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAGELKPD 373
V ++S++ + R E LF EL+ +P+
Sbjct: 282 KDVV---SWTSMIDRYFKSSRWREGFSLFSELVGSCERPN 318
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 95/247 (38%), Gaps = 46/247 (18%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
D ++ +I K GD+E EKL EM + +++ +I G G A L
Sbjct: 244 DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNP----VSWTALIAGYVRQGSGNRALDLF 299
Query: 223 KDM-----------------------------RVHG------CSPNLVVLSAIFDGLCRS 247
+ M +HG PN +V+S++ D +S
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKS 359
Query: 248 GSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVT 307
GS DC V + ++I + + ++AL +LD M F N T
Sbjct: 360 GSLEASERVFRICDDKHDC----VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTT 415
Query: 308 AFTLIDSLCDKGCVEEAYRLVDKL-VEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELL 366
++++ G VEE R + + V+HG+ + + +I L + R ++L R++
Sbjct: 416 LVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL--LGRAGCFKELMRKIE 473
Query: 367 AGELKPD 373
+PD
Sbjct: 474 EMPFEPD 480
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 6/203 (2%)
Query: 162 PDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSL 221
P+ +++N +I K G + EM D PD I+ + I G E A S+
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 222 LKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFC 281
+ + ++ + SA+ D + GS +VV ++++I +
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR-----DVVVWSAMIVGYG 400
Query: 282 ERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDC 341
+ EA+++ M G N VT L+ + G V E + +++ +H ++
Sbjct: 401 LHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQ 460
Query: 342 YSSLVISLI-RIKRLEEAEKLFR 363
+ + VI L+ R L++A ++ +
Sbjct: 461 HYACVIDLLGRAGHLDQAYEVIK 483
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 116/292 (39%), Gaps = 45/292 (15%)
Query: 127 VTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRP---DTVMYNVVIRLCCKKGDVEMG 183
VT + + +LK E + + AL + R++E R D V+YN I LC + +V
Sbjct: 174 VTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYET 233
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPE---DAY--------------------- 219
E++ R M ITY ++ GR E D Y
Sbjct: 234 ERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISA 293
Query: 220 -----------SLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRP 268
+ + M G PNLV + + + L ++G G +P
Sbjct: 294 CTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGH-KP 352
Query: 269 NVVTYTSLIQSFCERSQWNEALNVLDRMRAFG--CLANHVTAFTLIDSLCDK-GCVEEAY 325
+ T+ +L+ + + +++ + L + D +R+ CL ++ ++ C K G E+A
Sbjct: 353 DEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVS--CQKLGYWEKAV 410
Query: 326 RLVDKLVEHGVSYGDCYSSLVISLIRIKRLEEAEKLFRELLAG-ELKPDTLA 376
+L+ ++ G++ +LVIS R + L E +A + KP+T
Sbjct: 411 KLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFT 462
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 8/183 (4%)
Query: 153 RKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNA 212
+K+ D S + V++N++IR C GDVE G L ++MS ++++ +MI L
Sbjct: 157 QKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER----SIVSWNSMISSLSKC 212
Query: 213 GRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVT 272
GR +A L +M G P+ + + G SG + +
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 273 YTSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLV 332
+L+ +C+ A + +M+ N V+ TLI G E L D ++
Sbjct: 273 GNALVDFYCKSGDLEAATAIFRKMQR----RNVVSWNTLISGSAVNGKGEFGIDLFDAMI 328
Query: 333 EHG 335
E G
Sbjct: 329 EEG 331
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 8/206 (3%)
Query: 132 FREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMS 191
F +LK C A+ + V ++ +F PD+V+YN +I L K GD E + M
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 192 LSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXX 251
D++++ M+ N GR DA + + G PN +A+ S
Sbjct: 125 RFGK-RDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 252 XXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE-RSQWNEALNVLDRMRAFGCLANHVTAFT 310
K+G +V SLI F + + + A V D+M +V +T
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL-----NVVTWT 238
Query: 311 LIDSLC-DKGCVEEAYRLVDKLVEHG 335
L+ + C G EA R +V G
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSG 264
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 96/239 (40%), Gaps = 11/239 (4%)
Query: 163 DTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLL 222
D V+ ++ K G +E + M +++ +MI G N G EDA +
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMK----DENVVCCTSMISGYMNQGFVEDAEEIF 229
Query: 223 KDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCE 282
+V ++VV +A+ +G RSG + PN+ T+ S+I +
Sbjct: 230 NTTKVK----DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 283 RSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGDCY 342
+ V ++ G + +L+D G + +A R+ D++ E V +
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVF---SW 342
Query: 343 SSLVISLIRIKRLEEAEKLFRELLAGELKPDTLASSLLLKELCMKDRVLDGFYLLDAME 401
+S++ + EEA +LF + ++P+ + L V G+ + ++M+
Sbjct: 343 TSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 14/261 (5%)
Query: 124 GCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMG 183
G + T F VL CK+ + ++ + + G DT + N ++ L G++
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 184 EKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRVHGCSPNLVVLSAIFDG 243
E + MS DA +TY T+I GL G E A L K M + G P+ L+++
Sbjct: 343 EHIFSNMSQRDA----VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 244 LCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLA 303
G+ K G N + +L+ + + + AL+ +
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIE-GALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 304 NHV--TAFTLIDSLCDKGCVEEAYRLVDKL-VEHGVSYGDCYSSLVISLIRIKRLEEAEK 360
+V A+ L+D L ++R+ ++ +E V Y S++ + IR+ LE E+
Sbjct: 458 WNVMLVAYGLLDDL------RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 361 LFRELLAGELKPDTLASSLLL 381
+ +++ + + S+L+
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLI 532
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 20/248 (8%)
Query: 135 VLKLCKEAQLADVALWVLRKMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSD 194
++ L + QL + V + +G R +T++ N V+ C G++++ ++ EM+
Sbjct: 49 IVLLTRRRQLGQIVEEVEAAKKRYG-RLNTIVMNSVLEACVHCGNIDLALRMFHEMAEPG 107
Query: 195 ACP-DLITYITMIEGLCNAGRPEDAYSLLKDMR--VHGCSPNLV--VLSAIFDGLCRSG- 248
D I+Y T+++GL A R ++A+ +L+ + +P L ++ + D L +G
Sbjct: 108 GIGVDSISYATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGLLDALINAGD 167
Query: 249 ---SXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWNEALNVLDRMRAFGCLANH 305
+ G P+V+ Y L++ + A+N+LD M +
Sbjct: 168 LRRANGLLARYDILLLDHGT--PSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDR 225
Query: 306 VTAFTLIDSLCDKGCVEEAYRLVDKLVEHGVSYGD--------CYSSLVISLIRIKRLEE 357
+T TLI + G ++ A + + + E Y D Y++LV L
Sbjct: 226 LTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLS 285
Query: 358 AEKLFREL 365
+++F E+
Sbjct: 286 LQEIFLEM 293
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 5/182 (2%)
Query: 154 KMEDFGSRPDTVMYNVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAG 213
+M+ G P +YN ++ + ++ + KL+++++ PD +TY +MI LC AG
Sbjct: 319 EMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAG 378
Query: 214 RPEDAYSLLKDMRVHGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTY 273
+ + A ++L M SP + A + + K D P T+
Sbjct: 379 KLDVARNVLATMISENLSPTVDTFHAFLEAV-----NFEKTLEVLGQMKISDLGPTEETF 433
Query: 274 TSLIQSFCERSQWNEALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLVDKLVE 333
++ + Q AL + M F +AN I L G +E+A + ++
Sbjct: 434 LLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKS 493
Query: 334 HG 335
G
Sbjct: 494 KG 495
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 85/221 (38%), Gaps = 9/221 (4%)
Query: 108 RNPQMICDLIESYEAEGCVVTVNMFREVLKLCKEAQLADVALWVLRKMEDFGSRPDTVMY 167
+NP + L + AE + F +K C + + V K DFG + D +
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 168 NVVIRLCCKKGDVEMGEKLLREMSLSDACPDLITYITMIEGLCNAGRPEDAYSLLKDMRV 227
+ V+ L K G ++ E L +M A D+I + TM+ G AG+ A ++M+
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKM----AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 228 HGCSPNLVVLSAIFDGLCRSGSXXXXXXXXXXXXKSGDCRPNVVTYTSLIQSFCERSQWN 287
G + VV+ + G ++G NVV TSL+ + +
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTG-LPMNVVVETSLVDMYAKVGFIE 269
Query: 288 EALNVLDRMRAFGCLANHVTAFTLIDSLCDKGCVEEAYRLV 328
A V RM V+ +LI G +A+ V
Sbjct: 270 VASRVFSRM----MFKTAVSWGSLISGFAQNGLANKAFEAV 306