Miyakogusa Predicted Gene

Lj3g3v2170490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2170490.1 Non Chatacterized Hit- tr|I1K3D2|I1K3D2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55096
PE,55.43,9e-19,ZFP1 (ARABIDOPSIS THALIANA ZINC-FINGER PROTEIN 1),
NUCLEIC ACID BINDING / TRANS,NULL; ZINC FINGER PR,CUFF.43593.1
         (262 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 | chr5:86875...   108   4e-24
AT5G10970.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...   107   8e-24
AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 | ch...   102   3e-22
AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 | chr1:87260...    78   7e-15
AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 | chr1:24620...    72   5e-13
AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 | ch...    70   2e-12
AT5G14010.1 | Symbols: KNU | C2H2 and C2HC zinc fingers superfam...    59   3e-09
AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    55   7e-08
AT3G58070.1 | Symbols: GIS | C2H2 and C2HC zinc fingers superfam...    52   3e-07
AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    52   4e-07
AT5G48890.1 | Symbols:  | C2H2-like zinc finger protein | chr5:1...    51   7e-07
AT2G41940.1 | Symbols: ZFP8 | zinc finger protein 8 | chr2:17507...    51   9e-07
AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 | chr1:25016...    50   1e-06
AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |...    50   2e-06
AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers sup...    49   3e-06
AT5G05120.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    49   3e-06
AT5G27880.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    49   3e-06
AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc fin...    49   3e-06
AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    48   6e-06
AT5G06650.1 | Symbols: GIS2 | C2H2 and C2HC zinc fingers superfa...    48   6e-06

>AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 |
           chr5:8687524-8688231 FORWARD LENGTH=235
          Length = 235

 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 104/219 (47%), Gaps = 22/219 (10%)

Query: 51  SKPELNLLNCFHTDLXXXXXXXXXXXXLDPRVFSCNYCQRKFYSSQALGGHQNAHKRERT 110
           S  ELNL++C                  + ++FSCNYCQR FYSSQALGGHQNAHKRERT
Sbjct: 32  SSHELNLIDCIDD---TTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERT 88

Query: 111 LXXXXXXXXXXXSLDFGQRYYPSMASLPSFGLCN--KSLGIQVHSMINKPSYQTPLFGFL 168
           L           S  FG  Y    + LP  G  N  +SLGIQ HS+ +K S      GF 
Sbjct: 89  LAKRGQRMAASASA-FGHPY--GFSPLPFHGQYNNHRSLGIQAHSISHKLSSYN---GFG 142

Query: 169 HSHGQNGWQRQGLPFDSQPAIGKLTSPRNF-HVGAESESPLPGGNPKFGMF----STRKV 223
             +GQ  W R  LPFD QPAIGK  S  NF H   +     P  N +        +T +V
Sbjct: 143 GHYGQINWSR--LPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSRSNNIDSPSNTGRV 200

Query: 224 TEXXXXXXXXXXXXXXXXXTTHLKSKQEKLQKLDLSLKL 262
            E                 T+H     E+ QKLDLSLKL
Sbjct: 201 LEGSPTLEQWHGDKGLLLSTSH----HEEQQKLDLSLKL 235


>AT5G10970.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:3469268-3470086 FORWARD LENGTH=272
          Length = 272

 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 100/213 (46%), Gaps = 21/213 (9%)

Query: 54  ELNLLNCFHTDLXXXXXXXXXXXXLDPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLXX 113
           ELNLL+C  T +             + ++FSCNYCQR FYSSQALGGHQNAHKRERTL  
Sbjct: 77  ELNLLDCLETGVVTPSFNGSTST--EQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAK 134

Query: 114 XXXXXXXXXSLDFGQRYYPSMASLPSFG-LCNKSLGIQVHSMINKPSYQTPLFGFLHSHG 172
                    +  FG  Y    A +P  G   N++LGIQ HSM +KPS      G    +G
Sbjct: 135 RGQRMASAAA--FGHPY--GFAPVPFHGQYSNRTLGIQAHSMSHKPSSYNVYGG---EYG 187

Query: 173 QNGWQRQGLPFDSQPAIGKLTSPRNF--HVGAESESPLPGGNPKFGMFSTRKVTEXXXXX 230
           Q  W R  +P   QPAI KLTS  N   H       PL       G F   ++       
Sbjct: 188 QINWSR--IPLVQQPAIAKLTSTENHYNHHQMMIAPPLTSTCENIGRFDVGRIPVEFPTS 245

Query: 231 XXXXXXXXXXXXTTHLKSKQEKLQK-LDLSLKL 262
                          LK  +E+ QK LDLSLKL
Sbjct: 246 ELWQRGEEL------LKPAEEEKQKNLDLSLKL 272


>AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 |
           chr1:30339493-30340179 REVERSE LENGTH=228
          Length = 228

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 103/227 (45%), Gaps = 54/227 (23%)

Query: 54  ELNLLNCFHTDLXXXXXXXXXXXXL-DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLX 112
           ELNL++ F T              L DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 
Sbjct: 38  ELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 97

Query: 113 XXXXXXXXXXS------LDFGQ---RYYPSMASLPSFGLCN--KSLGIQVHSMINKPSY- 160
                     S        FG      + SMASLP  G  N   +LGIQ HS I+KPS+ 
Sbjct: 98  KRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFL 157

Query: 161 --QTPLFGFLHSHGQNGWQRQGLPFDSQPAIGKLTSPRNFHVGAESESPLPGGNPKFGMF 218
             QT      H   Q+  Q+        P IGK+  P  FH+          GN    M 
Sbjct: 158 GRQTT--SLSHVFKQSIHQK--------PTIGKML-PEKFHLEV-------AGNNNSNMV 199

Query: 219 STRKVTEXXXXXXXXXXXXXXXXXTTHLKSKQE---KLQKLDLSLKL 262
           + +                       H KS QE   + +K+DL+LKL
Sbjct: 200 AAK------------------LERIGHFKSNQEDHNQFKKIDLTLKL 228


>AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 |
           chr1:8726009-8726638 REVERSE LENGTH=209
          Length = 209

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 15/133 (11%)

Query: 79  DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLXXXXXXXXXXXSLDFGQRYYPSMASLP 138
           +PRVFSCNYC+RKFYSSQALGGHQNAHKRERT+              FG  + P      
Sbjct: 55  NPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRM----FGHHHRP------ 104

Query: 139 SFGLCNKSLGIQVHSMI--NKPSYQTPLFGFLHSHGQNGWQRQGLPFDSQPAIGKLTSPR 196
            +   + SLG+Q HS +  +  S   PL    H  G  G     L FD          P 
Sbjct: 105 -YTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFG-NTVPLFFDYDDGGSDFFWPG 162

Query: 197 NF-HVGAESESPL 208
           +F  V  E+E+P+
Sbjct: 163 SFRQVVEEAEAPV 175


>AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 |
           chr1:24620063-24620845 REVERSE LENGTH=260
          Length = 260

 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/31 (100%), Positives = 31/31 (100%)

Query: 81  RVFSCNYCQRKFYSSQALGGHQNAHKRERTL 111
           RVFSCNYCQRKFYSSQALGGHQNAHKRERTL
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTL 113


>AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 |
           chr5:23296019-23296471 FORWARD LENGTH=150
          Length = 150

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/32 (96%), Positives = 31/32 (96%)

Query: 80  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 111
           PRVFSCNYCQRKFYSSQALGGHQNAHK ERTL
Sbjct: 49  PRVFSCNYCQRKFYSSQALGGHQNAHKLERTL 80


>AT5G14010.1 | Symbols: KNU | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:4522260-4522745 FORWARD LENGTH=161
          Length = 161

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 26/30 (86%)

Query: 81  RVFSCNYCQRKFYSSQALGGHQNAHKRERT 110
           R+F C YC RKFY+SQALGGHQNAHKRER 
Sbjct: 36  RLFPCQYCPRKFYTSQALGGHQNAHKRERA 65


>AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:335630-336277 FORWARD LENGTH=215
          Length = 215

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 29/31 (93%)

Query: 81  RVFSCNYCQRKFYSSQALGGHQNAHKRERTL 111
           RVF+C +C+++F +SQALGGHQNAHK+ER+L
Sbjct: 65  RVFACTFCKKEFSTSQALGGHQNAHKQERSL 95


>AT3G58070.1 | Symbols: GIS | C2H2 and C2HC zinc fingers superfamily
           protein | chr3:21506845-21507606 REVERSE LENGTH=253
          Length = 253

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 81  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLXXXXXXXXXXXSLD--FGQRYYPSMASLP 138
           R F C+YC R F +SQALGGHQNAHKRER L             +  +  R+YPS  + P
Sbjct: 89  RRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSSYFYHPDNNPYSYRHYPSWTNGP 148

Query: 139 -----SFGLCNKSLGIQVHSMINKPSYQTPL 164
                S+G    S G +      +PSY + L
Sbjct: 149 LTAARSYG--GFSSGPKPSGYYTRPSYGSQL 177


>AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr4:9906918-9907532 FORWARD LENGTH=204
          Length = 204

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 26/31 (83%)

Query: 80  PRVFSCNYCQRKFYSSQALGGHQNAHKRERT 110
           PR ++CN+C+R+F S+QALGGH N H+R+R 
Sbjct: 43  PRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73


>AT5G48890.1 | Symbols:  | C2H2-like zinc finger protein |
           chr5:19820353-19820874 FORWARD LENGTH=173
          Length = 173

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/28 (75%), Positives = 25/28 (89%)

Query: 81  RVFSCNYCQRKFYSSQALGGHQNAHKRE 108
           R+F C +C RKF+SSQALGGHQNAHK+E
Sbjct: 33  RIFPCLFCSRKFHSSQALGGHQNAHKKE 60


>AT2G41940.1 | Symbols: ZFP8 | zinc finger protein 8 |
           chr2:17507556-17508329 FORWARD LENGTH=257
          Length = 257

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/29 (75%), Positives = 24/29 (82%)

Query: 81  RVFSCNYCQRKFYSSQALGGHQNAHKRER 109
           R F C+YC R F +SQALGGHQNAHKRER
Sbjct: 93  RRFECHYCFRNFPTSQALGGHQNAHKRER 121


>AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 |
           chr1:25016644-25017237 FORWARD LENGTH=197
          Length = 197

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 26/33 (78%)

Query: 79  DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 111
           + R + C YC R+F +SQALGGHQNAHK+ER L
Sbjct: 37  ESRKYECQYCCREFANSQALGGHQNAHKKERQL 69


>AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |
           chr2:15827706-15828620 REVERSE LENGTH=304
          Length = 304

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 26/31 (83%)

Query: 80  PRVFSCNYCQRKFYSSQALGGHQNAHKRERT 110
           PR ++C++C+R+F S+QALGGH N H+R+R 
Sbjct: 36  PRSYTCSFCRREFKSAQALGGHMNVHRRDRA 66


>AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers
           superfamily protein | chr5:1828426-1829106 REVERSE
           LENGTH=226
          Length = 226

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 25/31 (80%)

Query: 80  PRVFSCNYCQRKFYSSQALGGHQNAHKRERT 110
           PR +SC++C R+F S+QALGGH N H+R+R 
Sbjct: 52  PRSYSCSFCGREFKSAQALGGHMNVHRRDRA 82


>AT5G05120.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:1511232-1511837 FORWARD LENGTH=201
          Length = 201

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 24/30 (80%)

Query: 82  VFSCNYCQRKFYSSQALGGHQNAHKRERTL 111
           ++ C YC RKF  +QALGGHQNAH++ER +
Sbjct: 26  IYKCKYCPRKFDKTQALGGHQNAHRKEREV 55


>AT5G27880.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:9885908-9886744 FORWARD LENGTH=278
          Length = 278

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 27/29 (93%)

Query: 81  RVFSCNYCQRKFYSSQALGGHQNAHKRER 109
           ++++C++C++ F +SQALGGHQNAHK+ER
Sbjct: 78  KIYTCHFCKKGFSTSQALGGHQNAHKQER 106


>AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc
           fingers superfamily protein | chr3:8242504-8243118
           FORWARD LENGTH=204
          Length = 204

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 26/31 (83%)

Query: 80  PRVFSCNYCQRKFYSSQALGGHQNAHKRERT 110
           PR ++C++C+R+F S+QALGGH N H+R+R 
Sbjct: 44  PRSYTCSFCKREFRSAQALGGHMNVHRRDRA 74


>AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr1:25621678-25622412 REVERSE LENGTH=244
          Length = 244

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/29 (68%), Positives = 24/29 (82%)

Query: 81  RVFSCNYCQRKFYSSQALGGHQNAHKRER 109
           R + C YC R+F +SQALGGHQNAHK+ER
Sbjct: 71  RKYECQYCCREFGNSQALGGHQNAHKKER 99


>AT5G06650.1 | Symbols: GIS2 | C2H2 and C2HC zinc fingers
           superfamily protein | chr5:2043486-2044061 FORWARD
           LENGTH=191
          Length = 191

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/27 (77%), Positives = 23/27 (85%)

Query: 83  FSCNYCQRKFYSSQALGGHQNAHKRER 109
           F C+YC R F +SQALGGHQNAHKRER
Sbjct: 55  FKCHYCFRNFPTSQALGGHQNAHKRER 81