Miyakogusa Predicted Gene
- Lj3g3v1261120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1261120.1 tr|Q6ZH57|Q6ZH57_ORYSJ Os02g0769900 protein
OS=Oryza sativa subsp. japonica GN=OJ1079_F11.25-2 PE=4
,29.15,2e-18,PPR,Pentatricopeptide repeat; PGR3 (PROTON GRADIENT
REGULATION 3),NULL; FAMILY NOT NAMED,NULL; PPR_2,CUFF.42383.1
(522 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 547 e-156
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 5e-94
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 3e-92
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 1e-91
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 330 1e-90
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 323 1e-88
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 323 2e-88
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 4e-88
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 317 1e-86
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 4e-86
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 312 3e-85
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 311 5e-85
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 311 6e-85
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 5e-84
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 4e-83
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 7e-83
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 303 2e-82
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 302 5e-82
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 1e-81
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 9e-81
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 8e-80
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 1e-79
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 4e-78
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 9e-78
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 4e-77
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 282 4e-76
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 9e-76
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 281 1e-75
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 4e-75
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 2e-74
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 276 2e-74
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 276 3e-74
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 274 1e-73
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 273 2e-73
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 4e-73
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 6e-73
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 271 9e-73
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 271 1e-72
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 2e-72
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 269 3e-72
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 266 3e-71
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 2e-70
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 3e-70
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 1e-69
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 2e-69
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 2e-69
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 258 5e-69
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 3e-68
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 4e-68
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 7e-68
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 9e-68
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 4e-67
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 251 9e-67
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 250 2e-66
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 249 3e-66
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 8e-66
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 8e-65
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 1e-64
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 242 5e-64
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 7e-64
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 7e-63
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 237 2e-62
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 9e-62
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 231 7e-61
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 9e-61
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 3e-60
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 228 5e-60
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 6e-60
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 7e-60
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 227 2e-59
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 224 1e-58
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 7e-57
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 5e-56
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 214 9e-56
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 1e-55
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 209 4e-54
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 206 4e-53
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 3e-51
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 8e-50
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 3e-48
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 6e-48
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 9e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 184 2e-46
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 2e-35
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 113 4e-25
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 105 1e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 103 3e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 99 8e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 98 2e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 89 1e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 2e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 2e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 87 3e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 86 6e-17
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 81 1e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 9e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 78 2e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 77 2e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 4e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 71 2e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 3e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 3e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 67 4e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 66 5e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 8e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 65 9e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 58 1e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 58 1e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 3e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 56 8e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 52 1e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 547 bits (1409), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/467 (58%), Positives = 343/467 (73%), Gaps = 3/467 (0%)
Query: 47 RHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPS 106
RHN ++ TV+WTS I R+G+L EAA F M A VEPN+IT I LLSGC + S
Sbjct: 27 RHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTS 86
Query: 107 PSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNT 166
S + G +H YA KLGLD N V VGTA+I MY+K G ARLVFD M +N V+WNT
Sbjct: 87 GSE-ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
M+DGYMRSG++++A ++FD+ P R+ ISWTA+I GFVKK + ++AL FREMQ+SGV PD
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
YV + WVHR V++QD K+NVRVSNSLID+Y RCGC+E ARQVF
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQD-FKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
M RT+VSWNS+IVGFAANG A E+L +F MQ++GF+PD V++TGALTACSH GL++
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
EGLR F MK RI+PRIEHYGCLVDLYSRAGRLE+AL ++++MPMKPNEVV+GSLLAA
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA 384
Query: 407 CRTKG-EIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKK 465
C G I LAE++MK+L +L+ SNYV+LSN+YAA GKW+GA+K+RR MK G++K+
Sbjct: 385 CSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ 444
Query: 466 PGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
PGFSSIEID ++ F+AGD +H E I LEL+S +L+L G V +
Sbjct: 445 PGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVE 491
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 136/350 (38%), Gaps = 78/350 (22%)
Query: 181 LQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX--XXX 238
+Q ++ +SWT+ I + +A + F +M L+GV P+++T
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYA------------------------ 274
+H +++V V ++I MY+
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 275 -------RCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEP 327
R G ++ A ++FD M R ++SW ++I GF G +EAL +F MQ G +P
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 328 DGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDV 387
D V+ AL AC++ G + GL + ++ + + L+DLY R G +E A V
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWV-HRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 388 IKNMP----------------------------------MKPNEVVLGSLLAACRTKGEI 413
NM KP+ V L AC +
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC---SHV 320
Query: 414 GLAEKVMKYL------VELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
GL E+ ++Y + P + +Y L ++Y+ G+ + A K+ ++M
Sbjct: 321 GLVEEGLRYFQIMKCDYRISPRIE-HYGCLVDLYSRAGRLEDALKLVQSM 369
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 342 bits (876), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 275/461 (59%), Gaps = 6/461 (1%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
H D V W + I +CR G + EA F M+++ V P+ + L ++S C ++
Sbjct: 174 HRD-VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR---TGNMR 229
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
+ ++ + + + M D + TAL+ MYA +G +D AR F +M +RNL M+ GY
Sbjct: 230 YNRAIYEFLIENDVRM-DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
+ G ++DA +FD+ ++ + WT +I +V+ D+ ++AL F EM SG+ PD V++
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
WVH + + L+ + ++N+LI+MYA+CG ++ R VF+ M
Sbjct: 349 SVISACANLGILDKAKWVHSCIHV-NGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
R +VSW+S+I + +G A +ALS F M++E EP+ V++ G L CSH+GL++EG +I
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
F M I P++EHYGC+VDL+ RA L EAL+VI++MP+ N V+ GSL++ACR G
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Query: 412 EIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
E+ L + K ++EL+P D VL+SNIYA +W+ +RR M+++ + K+ G S I
Sbjct: 528 ELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Query: 472 EIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
+ + ++F+ GDK H+++ IYA L+ + +L+L GYVPD
Sbjct: 588 DQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 4/300 (1%)
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G +H A K+ + D V T +DMYA G ++ AR VFD+M R++V+WNTM++ Y
Sbjct: 130 GMELHGVAFKIA-TLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 188
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
R G +++A +LF+E N + ++ V + R + + D
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+ R + S++ N+ VS +++ Y++CG ++ A+ +FD +
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+V W ++I + + EAL F M G +PD VS ++AC++ G++D+ +
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWV 366
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+ V + + L+++Y++ G L+ DV + MP + N V S++ A GE
Sbjct: 367 HSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGE 425
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 335 bits (860), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 264/458 (57%), Gaps = 5/458 (1%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
+W I+ + R + E+ V M V P ++TL+ +LS C+ VH
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKD---LCKRVH 259
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
Y + + + +++ AL++ YA G +D A +F M R+++SW +++ GY+ G +
Sbjct: 260 EYVSECKTEPS-LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
+ A FD+ PVR+ ISWT +I G+++ ++LE FREMQ +G+ PD T+
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
W+ + + ++ +K++V V N+LIDMY +CGC E A++VF M R +W
Sbjct: 379 AHLGSLEIGEWI-KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTW 437
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
+++VG A NG EA+ F MQ +PD ++Y G L+AC+H+G++D+ + F KM+
Sbjct: 438 TAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRS 497
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
RI P + HYGC+VD+ RAG ++EA ++++ MPM PN +V G+LL A R + +AE
Sbjct: 498 DHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAE 557
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSI 477
K ++EL+P + Y LL NIYA +W +VRR + D I+K PGFS IE++
Sbjct: 558 LAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFA 617
Query: 478 YKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFSD 515
++FVAGDKSH ++ IY LE L+ E Y+PD S+
Sbjct: 618 HEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSE 655
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 161/384 (41%), Gaps = 68/384 (17%)
Query: 43 SFSLRHNTKHTDP-TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGC 101
S++ + K +P V W + I + E ++ M + V P++ T LL+G
Sbjct: 85 SYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL 144
Query: 102 AHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL 161
+++ G +H + K GL N + V AL+ MY+ G +D AR VFD+
Sbjct: 145 KR--DGGALACGKKLHCHVVKFGLGSN-LYVQNALVKMYSLCGLMDMARGVFDR------ 195
Query: 162 VSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS 221
R E + SW +I G+ + +++++E EM+ +
Sbjct: 196 -----------RCKE--------------DVFSWNLMISGYNRMKEYEESIELLVEMERN 230
Query: 222 GVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEI 281
V+P VT+ VH V ++ + ++R+ N+L++ YA CG ++I
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV-SECKTEPSLRLENALVNAYAACGEMDI 289
Query: 282 ARQVFDGMLHRTMVSWNSIIVGFAANG---LA---------------------------- 310
A ++F M R ++SW SI+ G+ G LA
Sbjct: 290 AVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCF 349
Query: 311 DEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGC 370
+E+L F MQ G PD + LTAC+H G ++ G I + + +I +
Sbjct: 350 NESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDK-NKIKNDVVVGNA 408
Query: 371 LVDLYSRAGRLEEALDVIKNMPMK 394
L+D+Y + G E+A V +M +
Sbjct: 409 LIDMYFKCGCSEKAQKVFHDMDQR 432
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 133/355 (37%), Gaps = 73/355 (20%)
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G + A +LF + P + + W +I G+ K D + + + M GV PD T
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+ + L N+ V N+L+ MY+ CG +++AR VFD +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH------------- 341
SWN +I G+ +E++ M++ P V+ L+ACS
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 342 ----------------------AGLIDEGLRIFNKMKR-------------VRR------ 360
G +D +RIF MK V R
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 361 --------IAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAACRT 409
+ RI + ++D Y RAG E+L++ + M M P+E + S+L AC
Sbjct: 322 RTYFDQMPVRDRIS-WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 410 KGEIGLAEKVMKYLVELDPGGDSNYVLLSN----IYAAVGKWDGANKVRRAMKDR 460
G + + E + Y +D N V++ N +Y G + A KV M R
Sbjct: 381 LGSLEIGEWIKTY---IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
++WT I + R+G E+ F M+ A + P+ T++++L+ CAH S+ G +
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL---GSLEIGEWI 390
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
Y K + NDV VG ALIDMY K G + A+ VF M R+ +W M+ G +G+
Sbjct: 391 KTYIDKNKIK-NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 177 IEDALQLF 184
++A+++F
Sbjct: 450 GQEAIKVF 457
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 333 bits (855), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 258/455 (56%), Gaps = 8/455 (1%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W S I ++G VEA F M E+ VEP+ +TL +++S CA S S++ G
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA---SLSAIKVGQE 274
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH K ND+ + A +DMYAK + AR +FD M +RN+++ +M+ GY +
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ A +F + RN +SW ALI G+ + +++AL F ++ V P + +
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 236 XXXXXXXXXXXXWVHRLVMT-----QDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
H V+ Q +D++ V NSLIDMY +CGC+E VF M+
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
R VSWN++I+GFA NG +EAL F M + G +PD ++ G L+AC HAG ++EG
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
F+ M R +AP +HY C+VDL RAG LEEA +I+ MPM+P+ V+ GSLLAAC+
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 411 GEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
I L + V + L+E++P YVLLSN+YA +GKW+ VR++M+ G+ K+PG S
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 471 IEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
I+I + F+ DKSH I++ L++L E++
Sbjct: 635 IKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 152/298 (51%), Gaps = 4/298 (1%)
Query: 97 LLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM 156
LL C S S + VHA K G N++ + LID Y+K G+++ R VFD+M
Sbjct: 25 LLDSC--IKSKLSAIYVRYVHASVIKSGFS-NEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 157 GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFR 216
RN+ +WN+++ G + G +++A LF P R+ +W +++ GF + D ++AL F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 217 EMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC 276
M G + + VH L+ L D V + ++L+DMY++C
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSD-VYIGSALVDMYSKC 200
Query: 277 GCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGAL 336
G + A++VFD M R +VSWNS+I F NG A EAL F M + EPD V+ +
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 337 TACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
+AC+ I G + ++ + ++ I VD+Y++ R++EA + +MP++
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/474 (37%), Positives = 276/474 (58%), Gaps = 14/474 (2%)
Query: 42 QSFSLRHNTKHTDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG 100
S +L H T DP + +T++I +G +A +V++ +E+ PN T +LL
Sbjct: 82 HSLALFHQT--IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKS 139
Query: 101 CAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRN 160
C S G +H + K GL + D V T L+D+YAK G+V SA+ VFD+M R+
Sbjct: 140 C-------STKSGKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 161 LVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL 220
LVS M+ Y + G +E A LFD R+ +SW +I G+ + AL F+++
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 221 SGV-APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G PD +TV W+H V + ++ NV+V LIDMY++CG +
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKS-SRIRLNVKVCTGLIDMYSKCGSL 310
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK-EGFEPDGVSYTGALTA 338
E A VF+ + +V+WN++I G+A +G + +AL FN MQ G +P +++ G L A
Sbjct: 311 EEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQA 370
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEV 398
C+HAGL++EG+RIF M + I P+IEHYGCLV L RAG+L+ A + IKNM M + V
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSV 430
Query: 399 VLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMK 458
+ S+L +C+ G+ L +++ +YL+ L+ YVLLSNIYA+VG ++G KVR MK
Sbjct: 431 LWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMK 490
Query: 459 DRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
++GI K+PG S+IEI++ +++F AGD+ H ++ IY L +S ++ GYVP+
Sbjct: 491 EKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN 544
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 265/450 (58%), Gaps = 10/450 (2%)
Query: 53 TDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
++P V +T+ I SG+ + S + RM V P+N + ++L C +
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC-------DLK 140
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
+HA KLG + VG ++++Y KSG + +A+ +FD+M R+ V+ M++ Y
Sbjct: 141 VCREIHAQVLKLGFG-SSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCY 199
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
G I++AL+LF + +++ + WTA+I G V+ +ALE FREMQ+ V+ + T
Sbjct: 200 SECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAV 259
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
WVH V Q N V N+LI+MY+RCG I AR+VF M
Sbjct: 260 CVLSACSDLGALELGRWVHSFVENQRMELSNF-VGNALINMYSRCGDINEARRVFRVMRD 318
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
+ ++S+N++I G A +G + EA++ F M GF P+ V+ L ACSH GL+D GL +
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
FN MKRV + P+IEHYGC+VDL R GRLEEA I+N+P++P+ ++LG+LL+AC+ G
Sbjct: 379 FNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHG 438
Query: 412 EIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+ L EK+ K L E + YVLLSN+YA+ GKW + ++R +M+D GI K+PG S+I
Sbjct: 439 NMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTI 498
Query: 472 EIDSSIYKFVAGDKSHEENGSIYASLELLS 501
E+D+ I++F+ GD +H +IY L+ L+
Sbjct: 499 EVDNQIHEFLVGDIAHPHKEAIYQRLQELN 528
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 274/453 (60%), Gaps = 6/453 (1%)
Query: 64 AHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKL 123
+++ R G EA F M ++ V P+ I++++ +S C+ ++ +G + H Y +
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL---RNILWGKSCHGYVLRN 366
Query: 124 GLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQL 183
G + D + ALIDMY K D+A +FD+M + +V+WN+++ GY+ +GE++ A +
Sbjct: 367 GFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 184 FDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ-LSGVAPDYVTVXXXXXXXXXXXX 242
F+ P +N +SW +I G V+ ++A+E F MQ GV D VT+
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 243 XXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIV 302
W++ + ++ ++ +VR+ +L+DM++RCG E A +F+ + +R + +W + I
Sbjct: 486 LDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIA 362
A G A+ A+ F+ M ++G +PDGV++ GALTACSH GL+ +G IF M ++ ++
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 363 PRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKY 422
P HYGC+VDL RAG LEEA+ +I++MPM+PN+V+ SLLAACR +G + +A +
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 423 LVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVA 482
+ L P +YVLLSN+YA+ G+W+ KVR +MK++G+RK PG SSI+I ++F +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 483 GDKSHEENGSIYASLELLSFELQLCGYVPDFSD 515
GD+SH E +I A L+ +S G+VPD S+
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSN 757
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 160/384 (41%), Gaps = 49/384 (12%)
Query: 48 HNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSP 107
N++ + S I + SG EA F+RM + + P+ T LS CA +
Sbjct: 91 ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 108 SSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTM 167
+ G +H K+G YAK +L N++
Sbjct: 151 GN---GIQIHGLIVKMG---------------YAK-----------------DLFVQNSL 175
Query: 168 LDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECF-REMQLSGVAPD 226
+ Y GE++ A ++FDE RN +SWT++I G+ ++D K A++ F R ++ V P+
Sbjct: 176 VHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPN 235
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
VT+ V+ + +++ VS +L+DMY +C I++A+++F
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLF 294
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA---- 342
D + N++ + GL EAL FN M G PD +S A+++CS
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 343 -GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLG 401
G G + N + I L+D+Y + R + A + M K V
Sbjct: 355 WGKSCHGYVLRNGFESWDNIC------NALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWN 407
Query: 402 SLLAACRTKGEIGLAEKVMKYLVE 425
S++A GE+ A + + + E
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPE 431
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 42/238 (17%)
Query: 29 ANPTFSPYNPNTNQSFSLRHNTKHTDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAE- 86
N Y Q + R + ++ TV W S +A + +G++ A TF M E
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 87 -------------------------------VEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + +T++++ S C H ++
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL---GALDLAKW 491
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
++ Y K G+ + DV++GT L+DM+++ G+ +SA +F+ + R++ +W + +G
Sbjct: 492 IYYYIEKNGIQL-DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAG 550
Query: 176 EIEDALQLFDEFPVRN-AISWTALIGGFVKKDHH---KQALECFREM-QLSGVAPDYV 228
E A++LFD+ + A +G H +Q E F M +L GV+P+ V
Sbjct: 551 NAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/437 (38%), Positives = 263/437 (60%), Gaps = 5/437 (1%)
Query: 79 FVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALID 138
+ RM + N T +LL C++ S+ +HA KLG + NDV +LI+
Sbjct: 103 YQRMLCSSAPHNAYTFPSLLKACSNL---SAFEETTQIHAQITKLGYE-NDVYAVNSLIN 158
Query: 139 MYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTAL 198
YA +GN A L+FD++ + VSWN+++ GY+++G+++ AL LF + +NAISWT +
Sbjct: 159 SYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTM 218
Query: 199 IGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDS 258
I G+V+ D +K+AL+ F EMQ S V PD V++ W+H +
Sbjct: 219 ISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRI 278
Query: 259 LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFN 318
D+V + LIDMYA+CG +E A +VF + +++ +W ++I G+A +G EA+S F
Sbjct: 279 RMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFM 337
Query: 319 SMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
MQK G +P+ +++T LTACS+ GL++EG IF M+R + P IEHYGC+VDL RA
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRA 397
Query: 379 GRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLS 438
G L+EA I+ MP+KPN V+ G+LL ACR I L E++ + L+ +DP YV +
Sbjct: 398 GLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKA 457
Query: 439 NIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLE 498
NI+A KWD A + RR MK++G+ K PG S+I ++ + ++F+AGD+SH E I +
Sbjct: 458 NIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWR 517
Query: 499 LLSFELQLCGYVPDFSD 515
++ +L+ GYVP+ +
Sbjct: 518 IMRRKLEENGYVPELEE 534
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 274/453 (60%), Gaps = 6/453 (1%)
Query: 64 AHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKL 123
+++ R G EA F M ++ V P+ I++++ +S C+ ++ +G + H Y +
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL---RNILWGKSCHGYVLRN 366
Query: 124 GLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQL 183
G + D + ALIDMY K D+A +FD+M + +V+WN+++ GY+ +GE++ A +
Sbjct: 367 GFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 184 FDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ-LSGVAPDYVTVXXXXXXXXXXXX 242
F+ P +N +SW +I G V+ ++A+E F MQ GV D VT+
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 243 XXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIV 302
W++ + ++ ++ +VR+ +L+DM++RCG E A +F+ + +R + +W + I
Sbjct: 486 LDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIA 362
A G A+ A+ F+ M ++G +PDGV++ GALTACSH GL+ +G IF M ++ ++
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 363 PRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKY 422
P HYGC+VDL RAG LEEA+ +I++MPM+PN+V+ SLLAACR +G + +A +
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 423 LVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVA 482
+ L P +YVLLSN+YA+ G+W+ KVR +MK++G+RK PG SSI+I ++F +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 483 GDKSHEENGSIYASLELLSFELQLCGYVPDFSD 515
GD+SH E +I A L+ +S G+VPD S+
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSN 757
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 160/384 (41%), Gaps = 49/384 (12%)
Query: 48 HNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSP 107
N++ + S I + SG EA F+RM + + P+ T LS CA +
Sbjct: 91 ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 108 SSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTM 167
+ G +H K+G YAK +L N++
Sbjct: 151 GN---GIQIHGLIVKMG---------------YAK-----------------DLFVQNSL 175
Query: 168 LDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECF-REMQLSGVAPD 226
+ Y GE++ A ++FDE RN +SWT++I G+ ++D K A++ F R ++ V P+
Sbjct: 176 VHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPN 235
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
VT+ V+ + +++ VS +L+DMY +C I++A+++F
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLF 294
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA---- 342
D + N++ + GL EAL FN M G PD +S A+++CS
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 343 -GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLG 401
G G + N + I L+D+Y + R + A + M K V
Sbjct: 355 WGKSCHGYVLRNGFESWDNIC------NALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWN 407
Query: 402 SLLAACRTKGEIGLAEKVMKYLVE 425
S++A GE+ A + + + E
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPE 431
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 122/293 (41%), Gaps = 41/293 (13%)
Query: 106 SPSSVSFGATV------HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR 159
+PSS+ T+ H K GLD NDV T L+ + G +S L F +
Sbjct: 35 TPSSLKNCKTIDELKMFHRSLTKQGLD-NDVSTITKLVARSCELGTRES--LSFAKEVFE 91
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
N S+ T + +LI G+ +A+ F M
Sbjct: 92 NSESYGT-------------------------CFMYNSLIRGYASSGLCNEAILLFLRMM 126
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
SG++PD T +H L++ KD + V NSL+ YA CG +
Sbjct: 127 NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD-LFVQNSLVHFYAECGEL 185
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALS-FFNSMQKEGFEPDGVSYTGALTA 338
+ AR+VFD M R +VSW S+I G+A A +A+ FF ++ E P+ V+ ++A
Sbjct: 186 DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
C+ ++ G +++ R I LVD+Y + A+DV K +
Sbjct: 246 CAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDMYMKCN----AIDVAKRL 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 121/319 (37%), Gaps = 79/319 (24%)
Query: 29 ANPTFSPYNPNTNQSFSLRHNTKHTDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAE- 86
N Y Q + R + ++ TV W S +A + +G++ A TF M E
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 87 -------------------------------VEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + +T++++ S C H ++
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL---GALDLAKW 491
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
++ Y K G+ + DV++GT L+DM+++ G+ +SA +F+ + R++ +W + +G
Sbjct: 492 IYYYIEKNGIQL-DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAG 550
Query: 176 EIEDALQLFDEFPVRN-AISWTALIGGFVKKDHH---KQALECFREM-QLSGVAPDYVTV 230
E A++LFD+ + A +G H +Q E F M +L GV+P+ V
Sbjct: 551 NAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHY 610
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM- 289
++D+ R G +E A Q+ + M
Sbjct: 611 ------------------------------------GCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 290 LHRTMVSWNSIIVGFAANG 308
+ V WNS++ G
Sbjct: 635 MEPNDVIWNSLLAACRVQG 653
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 322 bits (825), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 271/465 (58%), Gaps = 13/465 (2%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V WT+ ++ R G LV + FV MR VE ++++++ L CA + F
Sbjct: 77 VDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKL---EDLGFAQQG 133
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H A K+G+ + VKV AL+DMY K G V + +F+++ +++VSW +LD ++
Sbjct: 134 HGVAVKMGV-LTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG 192
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL-SGVAPDYVTVXXXXX 235
+E ++F E P RNA++WT ++ G++ ++ LE EM G ++VT+
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 236 XXXXXXXXXXXXWVH------RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM 289
WVH ++M +++ D+V V +L+DMYA+CG I+ + VF M
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
Query: 290 LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGL 349
R +V+WN++ G A +G + F M +E +PD +++T L+ACSH+G++DEG
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGW 371
Query: 350 RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRT 409
R F+ + R + P+++HY C+VDL RAG +EEA +++ MP+ PNEVVLGSLL +C
Sbjct: 372 RCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV 430
Query: 410 KGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
G++ +AE++ + L+++ PG +L+SN+Y A G+ D A+ +R +++ RGIRK PG S
Sbjct: 431 HGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLS 490
Query: 470 SIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
SI ++ S+++F +GD+SH IY L + ++ GYVPD S
Sbjct: 491 SIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVS 535
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 256/420 (60%), Gaps = 5/420 (1%)
Query: 82 MREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYA 141
+R++ P+ T + CA S S G VH + K G + V ALIDMY
Sbjct: 100 LRKSFELPDRFTFPFMFKSCA---SLGSCYLGKQVHGHLCKFGPRFH-VVTENALIDMYM 155
Query: 142 KSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGG 201
K ++ A VFD+M R+++SWN++L GY R G+++ A LF + +SWTA+I G
Sbjct: 156 KFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISG 215
Query: 202 FVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKD 261
+ + +A++ FREMQL+G+ PD +++ W+H + LK
Sbjct: 216 YTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLK- 274
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
V N+LI+MY++CG I A Q+F M + ++SW+++I G+A +G A A+ FN MQ
Sbjct: 275 QTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQ 334
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL 381
+ +P+G+++ G L+ACSH G+ EGLR F+ M++ +I P+IEHYGCL+D+ +RAG+L
Sbjct: 335 RAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKL 394
Query: 382 EEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIY 441
E A+++ K MPMKP+ + GSLL++CRT G + +A M +LVEL+P NYVLL+NIY
Sbjct: 395 ERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIY 454
Query: 442 AAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLS 501
A +GKW+ +++R+ +++ ++K PG S IE+++ + +FV+GD S I L+L +
Sbjct: 455 ADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFT 514
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+WT+ I+ + G VEA F M+ A +EP+ I+LI++L CA S+ G +
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL---GSLELGKWI 263
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H YA + G + V ALI+MY+K G + A +F QM ++++SW+TM+ GY G
Sbjct: 264 HLYAERRGF-LKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGN 322
Query: 177 IEDALQLFDE 186
A++ F+E
Sbjct: 323 AHGAIETFNE 332
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/480 (36%), Positives = 270/480 (56%), Gaps = 12/480 (2%)
Query: 40 TNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLS 99
N F +RH + +I H+ S Q S ++RMR V P+ T LL
Sbjct: 11 ANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLP 70
Query: 100 GCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR 159
+ +P + G HA GLD D V T+L++MY+ G++ SA+ VFD G +
Sbjct: 71 S---FHNPLHLPLGQRTHAQILLFGLD-KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
+L +WN++++ Y ++G I+DA +LFDE P RN ISW+ LI G+V +K+AL+ FREMQ
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 220 L-----SGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYA 274
L + V P+ T+ WVH + + ++ ++ + +LIDMYA
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI-DKYHVEIDIVLGTALIDMYA 245
Query: 275 RCGCIEIARQVFDGMLHRTMV-SWNSIIVGFAANGLADEALSFFNSMQ-KEGFEPDGVSY 332
+CG +E A++VF+ + + V +++++I A GL DE F+ M + P+ V++
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTF 305
Query: 333 TGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP 392
G L AC H GLI+EG F M I P I+HYGC+VDLY R+G ++EA I +MP
Sbjct: 306 VGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 365
Query: 393 MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANK 452
M+P+ ++ GSLL+ R G+I E +K L+ELDP YVLLSN+YA G+W
Sbjct: 366 MEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKC 425
Query: 453 VRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
+R M+ +GI K PG S +E++ +++FV GD+S +E+ IYA L+ + L+ GYV D
Sbjct: 426 IRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTD 485
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 271/461 (58%), Gaps = 6/461 (1%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W S I + G +A F +M +V+ +++T++ +LS CA ++ FG
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI---RNLEFGRQ 253
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
V +Y + +++N + + A++DMY K G+++ A+ +FD M ++ V+W TMLDGY S
Sbjct: 254 VCSYIEENRVNVN-LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS-GVAPDYVTVXXXX 234
+ E A ++ + P ++ ++W ALI + + +AL F E+QL + + +T+
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
W+H + + ++ N V+++LI MY++CG +E +R+VF+ + R +
Sbjct: 373 SACAQVGALELGRWIHSYI-KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
W+++I G A +G +EA+ F MQ+ +P+GV++T ACSH GL+DE +F++
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M+ I P +HY C+VD+ R+G LE+A+ I+ MP+ P+ V G+LL AC+ +
Sbjct: 492 MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLN 551
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
LAE L+EL+P D +VLLSNIYA +GKW+ +++R+ M+ G++K+PG SSIEID
Sbjct: 552 LAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611
Query: 475 SSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFSD 515
I++F++GD +H + +Y L + +L+ GY P+ S
Sbjct: 612 GMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQ 652
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 190/472 (40%), Gaps = 108/472 (22%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
+ AW + I + V + F+ M E++ PN T L+ A SS+S G
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEV---SSLSLGQ 151
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
++H A K + +DV V N+++ Y
Sbjct: 152 SLHGMAVKSAVG-SDVFVA-------------------------------NSLIHCYFSC 179
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G+++ A ++F ++ +SW ++I GFV+K +ALE F++M+ V +VT+
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG------ 288
V + ++ + N+ ++N+++DMY +CG IE A+++FD
Sbjct: 240 SACAKIRNLEFGRQVCSYI-EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 289 -------------------------MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ-K 322
M + +V+WN++I + NG +EAL F+ +Q +
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLE 382
+ + + ++ L+AC+ G ++ G I + +K+ I L+ +YS+ G LE
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLE 417
Query: 383 -------------------------------EALDVIKNMP---MKPNEVVLGSLLAACR 408
EA+D+ M +KPN V ++ AC
Sbjct: 418 KSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 409 TKGEIGLAEKVMKYLVELDPG---GDSNYVLLSNIYAAVGKWDGANKVRRAM 457
G + AE + + +E + G + +Y + ++ G + A K AM
Sbjct: 478 HTGLVDEAESLF-HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 3/221 (1%)
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXXXX 235
+E A ++FDE P N+ +W LI + ++ F +M S P+ T
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H + + + ++ +V V+NSLI Y CG ++ A +VF + + +V
Sbjct: 140 AAAEVSSLSLGQSLHGMAV-KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWNS+I GF G D+AL F M+ E + V+ G L+AC+ ++ G ++ + +
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPN 396
+ R+ + ++D+Y++ G +E+A + M K N
Sbjct: 259 EE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 311 bits (798), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 252/444 (56%), Gaps = 5/444 (1%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W I + + G+ +A + M V+P+++T+I L+S C+ ++ G
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSML---GDLNRGKEF 279
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
+ Y ++ GL M + + AL+DM++K G++ AR +FD + R +VSW TM+ GY R G
Sbjct: 280 YEYVKENGLRMT-IPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGL 338
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
++ + +LFD+ ++ + W A+IGG V+ + AL F+EMQ S PD +T+
Sbjct: 339 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 398
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
W+HR + + SL NV + SL+DMYA+CG I A VF G+ R ++
Sbjct: 399 CSQLGALDVGIWIHRYI-EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
+ +II G A +G A A+S+FN M G PD +++ G L+AC H G+I G F++MK
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+ P+++HY +VDL RAG LEEA ++++MPM+ + V G+LL CR G + L
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
EK K L+ELDP YVLL +Y W+ A + RR M +RG+ K PG SSIE++
Sbjct: 578 EKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGI 637
Query: 477 IYKFVAGDKSHEENGSIYASLELL 500
+ +F+ DKS E+ IY L L
Sbjct: 638 VCEFIVRDKSRPESEKIYDRLHCL 661
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 164/377 (43%), Gaps = 72/377 (19%)
Query: 85 AEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSG 144
E P++ T L CA S G + + KL L++ V A I M+A G
Sbjct: 150 CESRPDHFTYPVLFKVCADLRLSS---LGHMILGHVLKLRLELVS-HVHNASIHMFASCG 205
Query: 145 NVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVK 204
++++AR VFD+ +R+LVSWN +++GY + GE E A+ +
Sbjct: 206 DMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYV--------------------- 244
Query: 205 KDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVR 264
++ M+ GV PD VT+ + V ++ L+ +
Sbjct: 245 ----------YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV-KENGLRMTIP 293
Query: 265 VSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLAD------------- 311
+ N+L+DM+++CG I AR++FD + RT+VSW ++I G+A GL D
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 312 ------------------EALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+AL+ F MQ +PD ++ L+ACS G +D G+ I
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
+++ ++ + LVD+Y++ G + EAL V + + N + +++ G+
Sbjct: 414 YIEKY-SLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD- 470
Query: 414 GLAEKVMKYLVELDPGG 430
A + Y E+ G
Sbjct: 471 --ASTAISYFNEMIDAG 485
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 191 NAISWTALIGGFVKKDHHKQALECFREMQLSGVA---PDYVTVXXXXXXXXXXXXXXXXX 247
N SW I GF + ++ K++ +++M G PD+ T
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 248 WVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAAN 307
+ V+ + L+ V N+ I M+A CG +E AR+VFD R +VSWN +I G+
Sbjct: 177 MILGHVL-KLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 308 GLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR--VRRIAPRI 365
G A++A+ + M+ EG +PD V+ G +++CS G ++ G + +K +R P +
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 366 EHYGCLVDLYSRAGRLEEALDVIKNM 391
L+D++S+ G + EA + N+
Sbjct: 296 ---NALMDMFSKCGDIHEARRIFDNL 318
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 258/463 (55%), Gaps = 40/463 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W + I+ + +G EA F M + V P+ T++T++S CA S+ G
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ---SGSIELGRQ 287
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH + G N +K+ ALID+Y+K G
Sbjct: 288 VHLWIDDHGFGSN-LKIVNALIDLYSKC-------------------------------G 315
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
E+E A LF+ P ++ ISW LIGG+ + +K+AL F+EM SG P+ VT+
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSN---SLIDMYARCGCIEIARQVFDGMLHR 292
W+H V LK S+ SLIDMYA+CG IE A QVF+ +LH+
Sbjct: 376 ACAHLGAIDIGRWIH--VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
++ SWN++I GFA +G AD + F+ M+K G +PD +++ G L+ACSH+G++D G IF
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 493
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
M + ++ P++EHYGC++DL +G +EA ++I M M+P+ V+ SLL AC+ G
Sbjct: 494 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 553
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
+ L E + L++++P +YVLLSNIYA+ G+W+ K R + D+G++K PG SSIE
Sbjct: 554 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 613
Query: 473 IDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFSD 515
IDS +++F+ GDK H N IY LE + L+ G+VPD S+
Sbjct: 614 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 197/404 (48%), Gaps = 40/404 (9%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
+ W + H S V A +V M + PN+ T +L CA + G +
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA---KSKAFKEGQQI 156
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + KLG D+ D+ V T+LI MY ++G ++ A VFD+ R++VS+ ++ GY G
Sbjct: 157 HGHVLKLGCDL-DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
IE+A +LFDE PV++ +SW A+I G+ + ++K+ALE F++M + V PD T+
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
VH L + N+++ N+LID+Y++CG +E A +F+ + ++ ++S
Sbjct: 276 CAQSGSIELGRQVH-LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM- 355
WN++I G+ L EAL F M + G P+ V+ L AC+H G ID G I +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDV---------------------------- 387
KR++ + L+D+Y++ G +E A V
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 388 ------IKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE 425
++ + ++P+++ LL+AC G + L + + + +
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/429 (38%), Positives = 254/429 (59%), Gaps = 8/429 (1%)
Query: 63 IAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARK 122
I + + G +EA + +M +EP+ T+++LL C H S + G VH + +
Sbjct: 204 IVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHL---SDIRLGKGVHGWIER 260
Query: 123 LG-LDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDAL 181
G + +++ + AL+DMY K A+ FD M +++ SWNTM+ G++R G++E A
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQ 320
Query: 182 QLFDEFPVRNAISWTALIGGFVKKDHHKQAL-ECFREMQL-SGVAPDYVTVXXXXXXXXX 239
+FD+ P R+ +SW +L+ G+ KK ++ + E F EM + V PD VT+
Sbjct: 321 AVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 240 XXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNS 299
WVH LV+ + LK + +S++LIDMY +CG IE A VF + + W S
Sbjct: 381 NGELSHGRWVHGLVI-RLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTS 439
Query: 300 IIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVR 359
+I G A +G +AL F MQ+EG P+ V+ LTACSH+GL++EGL +FN MK
Sbjct: 440 MITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKF 499
Query: 360 RIAPRIEHYGCLVDLYSRAGRLEEALDVI-KNMPMKPNEVVLGSLLAACRTKGEIGLAEK 418
P EHYG LVDL RAGR+EEA D++ K MPM+P++ + GS+L+ACR +I AE
Sbjct: 500 GFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAEL 559
Query: 419 VMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIY 478
+ L++L+P + YVLLSNIYA VG+W ++K R AM++RG++K G+SS+ ++
Sbjct: 560 ALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLH 619
Query: 479 KFVAGDKSH 487
+FVA +K +
Sbjct: 620 RFVAAEKQN 628
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 6/202 (2%)
Query: 164 WNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
WN+++ YM G A ++F P + S+ +I G+ K+ +AL+ + +M G+
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSL-KDNVRVSNSLIDMYARCGCIEIA 282
PD TV VH + + + N+ +SN+L+DMY +C +A
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
++ FD M + M SWN+++VGF G + A + F+ M K D VS+ L S
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR----DLVSWNSLLFGYSKK 344
Query: 343 GLIDEGLR-IFNKMKRVRRIAP 363
G +R +F +M V ++ P
Sbjct: 345 GCDQRTVRELFYEMTIVEKVKP 366
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
+H ++ L + NSL+ Y G +A +VF M H + S+N +IVG+A G
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRI-APRIEH 367
+ EAL + M +G EPD + L C H I G + ++R + + +
Sbjct: 212 FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 368 YGCLVDLYSR---AGRLEEALDVIKNMPMKP-NEVVLG 401
L+D+Y + +G + A D +K M+ N +V+G
Sbjct: 272 SNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVG 309
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 53 TDPTVA-WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
T+ VA WTS I G +A F RM+E V PNN+TL+ +L+ C+H V
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSH---SGLVE 486
Query: 112 FGATVHAYAR-KLGLDMNDVKVGTALIDMYAKSGNVDSAR-LVFDQMGLRNLVS-WNTML 168
G V + + K G D G+ L+D+ ++G V+ A+ +V +M +R S W ++L
Sbjct: 487 EGLHVFNHMKDKFGFDPETEHYGS-LVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSIL 545
Query: 169 DGYMRSGEIEDA 180
+IE A
Sbjct: 546 SACRGGEDIETA 557
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 264/472 (55%), Gaps = 11/472 (2%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W ++ RSG EA F ++ P+ +T+ ++L ++ G +
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVG---DSEMLNMGRLI 274
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H Y K GL + D V +A+IDMY KSG+V +F+Q + N + G R+G
Sbjct: 275 HGYVIKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 177 IEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
++ AL++F+ F + N +SWT++I G + +ALE FREMQ++GV P++VT+
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
H + + L DNV V ++LIDMYA+CG I +++ VF+ M +
Sbjct: 394 MLPACGNIAALGHGRSTHGFAV-RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+V WNS++ GF+ +G A E +S F S+ + +PD +S+T L+AC GL DEG + F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
M I PR+EHY C+V+L RAG+L+EA D+IK MP +P+ V G+LL +CR +
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
+ LAE + L L+P YVLLSNIYAA G W + +R M+ G++K PG S I+
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 473 IDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP--DFSDKETYEDD 522
+ + +Y +AGDKSH + I ++ +S E++ G+ P DF+ + E +
Sbjct: 633 VKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQE 684
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 187/444 (42%), Gaps = 83/444 (18%)
Query: 54 DPTVAWTSSIAHHCRSGQL-VEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
DPT+ SS+ + +L ++ F RM + P++ L L CA S+
Sbjct: 78 DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL---SAFKV 134
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G +H + GLDM D V ++ MY + G + AR VFD+M +++V+ + +L Y
Sbjct: 135 GKQIHCVSCVSGLDM-DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193
Query: 173 RSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
R G +E+ +++ E N +SW ++ GF + +HK+A+ F+++ G PD V
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMY--------------- 273
TV +H V+ Q LKD +S ++IDMY
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVIS-AMIDMYGKSGHVYGIISLFNQ 312
Query: 274 ----------------ARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEA 313
+R G ++ A ++F+ +TM VSW SII G A NG EA
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVD 373
L F MQ G +P+ V+ L AC + + G RV + + L+D
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV-HLLDNVHVGSALID 431
Query: 374 LYSRAGRLEEALDVIKNMP----------------------------------MKPNEVV 399
+Y++ GR+ + V MP +KP+ +
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 400 LGSLLAACRTKGEIGLAEKVMKYL 423
SLL+AC G++GL ++ KY
Sbjct: 492 FTSLLSAC---GQVGLTDEGWKYF 512
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 169 DGYMRSGEI---------EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
DGY+ + I DA + P S+++LI K Q++ F M
Sbjct: 49 DGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMF 108
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G+ PD + +H V L + V S+ MY RCG +
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIH-CVSCVSGLDMDAFVQGSMFHMYMRCGRM 167
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
AR+VFD M + +V+ ++++ +A G +E + + M+ G E + VS+ G L+
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227
Query: 340 SHAGLIDEGLRIFNKMKRV 358
+ +G E + +F K+ +
Sbjct: 228 NRSGYHKEAVVMFQKIHHL 246
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 263/459 (57%), Gaps = 7/459 (1%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
WT+ I + G+ EA + + MR+ E+ P + T LL C + ++ G HA
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACG---TMKDLNLGRQFHA 173
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
+L V VG +IDMY K ++D AR VFD+M R+++SW ++ Y R G +E
Sbjct: 174 QTFRLR-GFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
A +LF+ P ++ ++WTA++ GF + ++ALE F M+ SG+ D VTV
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 239 XXXXXXXXXWVHRLVMTQD-SLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
++ S D+V + ++LIDMY++CG +E A VF M ++ + ++
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 298 NSIIVGFAANGLADEALSFFNSM-QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
+S+I+G A +G A EAL F+ M + +P+ V++ GAL ACSH+GL+D+G ++F+ M
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY 412
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+ + P +HY C+VDL R GRL+EAL++IK M ++P+ V G+LL ACR +A
Sbjct: 413 QTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIA 472
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS-SIEIDS 475
E ++L EL+P NY+LLSN+YA+ G W G +VR+ +K++G++K P S ++ +
Sbjct: 473 EIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNG 532
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
++KF G+ +H + I LE L L + GY PD S
Sbjct: 533 QMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLS 571
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 252/443 (56%), Gaps = 6/443 (1%)
Query: 74 EAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVG 133
+A + +M ++ + P+NIT L+ + V G H+ + G NDV V
Sbjct: 100 KAFGFYTQMLKSRIWPDNITFPFLIKASSEM---ECVLVGEQTHSQIVRFGFQ-NDVYVE 155
Query: 134 TALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAI 193
+L+ MYA G + +A +F QMG R++VSW +M+ GY + G +E+A ++FDE P RN
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF 215
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
+W+ +I G+ K + ++A++ F M+ GV + + + V
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV 275
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+ + + N+ + +L+DM+ RCG IE A VF+G+ +SW+SII G A +G A +A
Sbjct: 276 V-KSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKA 334
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVD 373
+ +F+ M GF P V++T L+ACSH GL+++GL I+ MK+ I PR+EHYGC+VD
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 374 LYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSN 433
+ RAG+L EA + I M +KPN +LG+LL AC+ +AE+V L+++ P
Sbjct: 395 MLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGY 454
Query: 434 YVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAG-DKSHEENGS 492
YVLLSNIYA G+WD +R MK++ ++K PG+S IEID I KF G D+ H E G
Sbjct: 455 YVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGK 514
Query: 493 IYASLELLSFELQLCGYVPDFSD 515
I E + +++L GY + D
Sbjct: 515 IRRKWEEILGKIRLIGYKGNTGD 537
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
W+ I + ++ +A F M+ V N +++++S CAH ++ FG +
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHL---GALEFGERAY 272
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
Y K + +N + +GTAL+DM+ + G+++ A VF+ + + +SW++++ G G
Sbjct: 273 EYVVKSHMTVNLI-LGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHA 331
Query: 178 EDALQLFDEFP----VRNAISWTALI-----GGFVKKDHHKQALECFREMQLS-GVAP 225
A+ F + + +++TA++ GG V+K LE + M+ G+ P
Sbjct: 332 HKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK-----GLEIYENMKKDHGIEP 384
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 268/522 (51%), Gaps = 72/522 (13%)
Query: 43 SFSLRHNTKHTDPTVAWTSS-IAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGC 101
+ ++R + +P V +S I H ++ Q +A F M+ + +N T LL C
Sbjct: 68 NLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC 127
Query: 102 AHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYA-------------------- 141
+ S + +H + KLGL +D+ V ALID Y+
Sbjct: 128 S---GQSWLPVVKMMHNHIEKLGLS-SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 142 -------------KSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFP 188
K+G + AR +FD+M R+L+SWNTMLDGY R E+ A +LF++ P
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 189 VRNAISW---------------------------------TALIGGFVKKDHHKQALECF 215
RN +SW T +I G+ +K K+A
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 216 REMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYAR 275
+M SG+ D V +H ++ + +L N V N+L+DMYA+
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS-ILKRSNLGSNAYVLNALLDMYAK 362
Query: 276 CGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
CG ++ A VF+ + + +VSWN+++ G +G EA+ F+ M++EG PD V++
Sbjct: 363 CGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAV 422
Query: 336 LTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKP 395
L +C+HAGLIDEG+ F M++V + P++EHYGCLVDL R GRL+EA+ V++ MPM+P
Sbjct: 423 LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEP 482
Query: 396 NEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRR 455
N V+ G+LL ACR E+ +A++V+ LV+LDP NY LLSNIYAA W+G +R
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRS 542
Query: 456 AMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASL 497
MK G+ K G SS+E++ I++F DKSH ++ IY L
Sbjct: 543 KMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 305 bits (780), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 258/472 (54%), Gaps = 39/472 (8%)
Query: 75 AASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVG 133
+ + FV M R+ V P++ + ++ ++ S+ G +H A K GL+ + + VG
Sbjct: 89 SVAVFVEMMRKGFVFPDSFSFAFVIKAVENF---RSLRTGFQMHCQALKHGLE-SHLFVG 144
Query: 134 TALIDMYAKSGNVDSARLVFDQMGLRNLV------------------------------- 162
T LI MY G V+ AR VFD+M NLV
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHT 204
Query: 163 SWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG 222
SWN ML GY+++GE+E A ++F E P R+ +SW+ +I G ++ FRE+Q +G
Sbjct: 205 SWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG 264
Query: 223 VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIA 282
++P+ V++ +H V + V V+N+LIDMY+RCG + +A
Sbjct: 265 MSPNEVSLTGVLSACSQSGSFEFGKILHGFV-EKAGYSWIVSVNNALIDMYSRCGNVPMA 323
Query: 283 RQVFDGMLH-RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
R VF+GM R +VSW S+I G A +G +EA+ FN M G PDG+S+ L ACSH
Sbjct: 324 RLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSH 383
Query: 342 AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLG 401
AGLI+EG F++MKRV I P IEHYGC+VDLY R+G+L++A D I MP+ P +V
Sbjct: 384 AGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWR 443
Query: 402 SLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRG 461
+LL AC + G I LAE+V + L ELDP + VLLSN YA GKW +R++M +
Sbjct: 444 TLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQR 503
Query: 462 IRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQ-LCGYVPD 512
I+K +S +E+ ++YKF AG+K + + L+ + L+ GY P+
Sbjct: 504 IKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPE 555
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W++ I +G E+ F ++ A + PN ++L +LS C+ S FG +
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQ---SGSFEFGKIL 291
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMG-LRNLVSWNTMLDGYMRSG 175
H + K G V V ALIDMY++ GNV ARLVF+ M R +VSW +M+ G G
Sbjct: 292 HGFVEKAGYSW-IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHG 350
Query: 176 EIEDALQLFDE 186
+ E+A++LF+E
Sbjct: 351 QGEEAVRLFNE 361
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 27/297 (9%)
Query: 177 IEDAL----QLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-VAPDYVTVX 231
I DAL +L FP +A + L+ G+ + D ++ F EM G V PD +
Sbjct: 51 ISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFA 110
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
+H + + L+ ++ V +LI MY CGC+E AR+VFD M
Sbjct: 111 FVIKAVENFRSLRTGFQMHCQAL-KHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ 169
Query: 292 RTMVSWNSIIVG-FAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+V+WN++I F N +A A F+ M + S+ L AG ++ R
Sbjct: 170 PNLVAWNAVITACFRGNDVAG-AREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKR 224
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAAC 407
IF++M ++ + ++ + G E+ + + M PNEV L +L+AC
Sbjct: 225 IFSEMPHRDDVS-----WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 279
Query: 408 RTKGEIGLAEKVMKYLVELDPGGDSNYVLLSN----IYAAVGKWDGANKVRRAMKDR 460
G K++ VE G S V ++N +Y+ G A V M+++
Sbjct: 280 SQSGSFEFG-KILHGFVE--KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK 333
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 263/460 (57%), Gaps = 9/460 (1%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W S I+ + G + A F +M R++ + P+ TL ++LS CA+ + G
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL---EKLCIGKQ 300
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLV--SWNTMLDGYMR 173
+H++ G D++ + V ALI MY++ G V++AR + +Q G ++L + +LDGY++
Sbjct: 301 IHSHIVTTGFDISGI-VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
G++ A +F R+ ++WTA+I G+ + + +A+ FR M G P+ T+
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-LHR 292
+H + + +V VSN+LI MYA+ G I A + FD + R
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIY-SVSVSNALITMYAKAGNITSASRAFDLIRCER 478
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
VSW S+I+ A +G A+EAL F +M EG PD ++Y G +AC+HAGL+++G + F
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+ MK V +I P + HY C+VDL+ RAG L+EA + I+ MP++P+ V GSLL+ACR
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 598
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
I L + + L+ L+P Y L+N+Y+A GKW+ A K+R++MKD ++K+ GFS IE
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Query: 473 IDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
+ ++ F D +H E IY +++ + E++ GYVPD
Sbjct: 659 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPD 698
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 205/431 (47%), Gaps = 56/431 (12%)
Query: 89 PNNITLITLLSGCAHY----PSPSSVSFGAT-VHAYARKLGLDMNDVKVGTALIDMYAKS 143
P ++L TLL C + + S+ F A VH K GL M V + L+++Y+K+
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGL-MFSVYLMNNLMNVYSKT 62
Query: 144 GNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFV 203
G AR +FD+M LR SWNT+L Y + G+++ + FD+ P R+++SWT +I G+
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 204 KKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNV 263
+ +A+ +M G+ P T+ VH ++ + L+ NV
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV-KLGLRGNV 181
Query: 264 RVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKE 323
VSNSL++MYA+CG +A+ VFD M+ R + SWN++I G D A++ F M
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA-- 239
Query: 324 GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEE 383
E D V++ ++ + G L IF+KM
Sbjct: 240 --ERDIVTWNSMISGFNQRGYDLRALDIFSKM---------------------------- 269
Query: 384 ALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAA 443
+++ + P+ L S+L+AC ++ + +++ ++V G D + ++L+ + +
Sbjct: 270 ----LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT--TGFDISGIVLNALISM 323
Query: 444 VGKWDGANKVRRAMKDRGIR--KKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASL---E 498
+ G RR ++ RG + K GF+++ +D I GD + +N I+ SL +
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTAL-LDGYIK---LGDMNQAKN--IFVSLKDRD 377
Query: 499 LLSFELQLCGY 509
++++ + GY
Sbjct: 378 VVAWTAMIVGY 388
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 205/464 (44%), Gaps = 83/464 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V+WT+ I + GQ +A M + +EP TL +L+ A + + G
Sbjct: 111 SVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVA---ATRCMETGKK 167
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH++ KLGL N V V +L++MYAK G+ A+ VFD+M +R++ SWN M+ +M+ G
Sbjct: 168 VHSFIVKLGLRGN-VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXXX 234
+++ A+ F++ R+ ++W ++I GF ++ + +AL+ F +M + S ++PD T+
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ---------- 284
+H ++T + V N+LI MY+RCG +E AR+
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGI-VLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 285 -----------------------VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
+F + R +V+W ++IVG+ +G EA++ F SM
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 322 KEGFEPD----------------------------------GVSYTGAL-TACSHAGLID 346
G P+ VS + AL T + AG I
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPM---KPNEVVLGSL 403
R F+ ++ R + ++ ++ G EEAL++ + M M +P+ + +
Sbjct: 466 SASRAFDLIRCERDTVS----WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 404 LAACRTKGEIGLAEKVMKYLVELDP--GGDSNYVLLSNIYAAVG 445
+AC G + + + ++D S+Y + +++ G
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 254/452 (56%), Gaps = 20/452 (4%)
Query: 75 AASTFVRMREAE-VEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVG 133
A + F M E VEPN T ++L CA + G +H A K G D V
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACA---KTGKIQEGKQIHGLALKYGFG-GDEFVM 166
Query: 134 TALIDMYAKSGNVDSARLVF-------DQMGLRN-------LVSWNTMLDGYMRSGEIED 179
+ L+ MY G + AR++F D + + + +V WN M+DGYMR G+ +
Sbjct: 167 SNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKA 226
Query: 180 ALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXX 239
A LFD+ R+ +SW +I G+ K A+E FREM+ + P+YVT+
Sbjct: 227 ARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISR 286
Query: 240 XXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNS 299
W+H L ++ + + ++LIDMY++CG IE A VF+ + +++W++
Sbjct: 287 LGSLELGEWLH-LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA 345
Query: 300 IIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVR 359
+I GFA +G A +A+ F M++ G P V+Y LTACSH GL++EG R F++M V
Sbjct: 346 MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVD 405
Query: 360 RIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKV 419
+ PRIEHYGC+VDL R+G L+EA + I NMP+KP++V+ +LL ACR +G + + ++V
Sbjct: 406 GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
Query: 420 MKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYK 479
L+++ P YV LSN+YA+ G W +++R MK++ IRK PG S I+ID +++
Sbjct: 466 ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHE 525
Query: 480 FVAGDKSHEENGSIYASLELLSFELQLCGYVP 511
FV D SH + I + L +S +L+L GY P
Sbjct: 526 FVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 79/303 (26%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W + I+ + +G +A F M++ ++ PN +TL+++L + S+ G
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL---GSLELGEW 295
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H YA G+ ++DV +G+ALIDMY+K G ++ A VF+++ N+++W+ M++G+ G
Sbjct: 296 LHLYAEDSGIRIDDV-LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHG 354
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ D A++CF +M+ +GV P V
Sbjct: 355 QAGD-------------------------------AIDCFCKMRQAGVRPSDVAYI---- 379
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-----L 290
+L+ + G +E R+ F M L
Sbjct: 380 --------------------------------NLLTACSHGGLVEEGRRYFSQMVSVDGL 407
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ + ++ +GL DEA F +M +PD V + L AC G ++ G R
Sbjct: 408 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---IKPDDVIWKALLGACRMQGNVEMGKR 464
Query: 351 IFN 353
+ N
Sbjct: 465 VAN 467
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 57/292 (19%)
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQ--ALECFREMQLSG-VAPDYVTVXX 232
+++ A ++F++ P RN SW +I GF + D K A+ F EM V P+ T
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 233 XXXXXXXXXXXXXXXWVHRL---------------------------------------- 252
+H L
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 253 ---VMTQDSLKD-NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
VMT +D + + N +ID Y R G + AR +FD M R++VSWN++I G++ NG
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG--LRIFNKMKRVRRIAPRIE 366
+A+ F M+K P+ V+ L A S G ++ G L ++ + + RI+
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI-----RID 308
Query: 367 HY--GCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
L+D+YS+ G +E+A+ V + +P + N + +++ G+ G A
Sbjct: 309 DVLGSALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQAGDA 359
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 301 bits (770), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 263/476 (55%), Gaps = 14/476 (2%)
Query: 55 PTV-AWTSSIAHHCRSGQLVEAASTFVRMREA--EVEPNNITLITLLSGCAHYPSPSSVS 111
PT+ A S I HC+S ++ + R+ + +++P+N T+ L+ C +
Sbjct: 69 PTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET-- 126
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
G VH + G D ND V T LI +YA+ G +DS VF+ + + V M+
Sbjct: 127 -GLQVHGMTIRRGFD-NDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTAC 184
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
R G++ A +LF+ P R+ I+W A+I G+ + ++AL F MQL GV + V +
Sbjct: 185 ARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMI 244
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
W H + ++ +K VR++ +L+D+YA+CG +E A +VF GM
Sbjct: 245 SVLSACTQLGALDQGRWAHSYI-ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
+ + +W+S + G A NG ++ L F+ M+++G P+ V++ L CS G +DEG R
Sbjct: 304 KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRH 363
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
F+ M+ I P++EHYGCLVDLY+RAGRLE+A+ +I+ MPMKP+ V SLL A R
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYK 423
Query: 412 EIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+ L K ++EL+ YVLLSNIYA WD + VR++MK +G+RK+PG S +
Sbjct: 424 NLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVM 483
Query: 472 EIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS------DKETYED 521
E++ +++F GDKSH + I A + +S L+L GY D + D+E ED
Sbjct: 484 EVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKED 539
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 279 IEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG--FEPDGVSYTGAL 336
++ A Q+ D T+ + NS+I + + +++ F+ + G +PD + +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 337 TACSHAGLIDEGLRIFN-KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKP 395
AC+ + + GL++ ++R P ++ L+ LY+ G L+ V ++P P
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQ--TGLISLYAELGCLDSCHKVFNSIPC-P 172
Query: 396 NEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRR 455
+ V +++ AC G++ A K+ + + E DP + + + YA VG+ A V
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIA---WNAMISGYAQVGESREALNVFH 229
Query: 456 AMKDRGIRKKPGFSSIEIDSSIYKFVAGDK 485
M+ G+ K G + I + S+ + A D+
Sbjct: 230 LMQLEGV-KVNGVAMISVLSACTQLGALDQ 258
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 255/487 (52%), Gaps = 42/487 (8%)
Query: 63 IAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARK 122
I + +G E F M V P++ T +L C+ ++ G +H A K
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS---CSGTIVIGRKIHGSATK 168
Query: 123 LGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQ 182
+GL + + VG L+ MY K G + ARLV D+M R++VSWN+++ GY ++ +DAL+
Sbjct: 169 VGLS-STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALE 227
Query: 183 -------------------------------------LFDEFPVRNAISWTALIGGFVKK 205
+F + ++ +SW +IG ++K
Sbjct: 228 VCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 206 DHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRV 265
+A+E + M+ G PD V++ +H + + L N+ +
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI-ERKKLIPNLLL 346
Query: 266 SNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGF 325
N+LIDMYA+CGC+E AR VF+ M R +VSW ++I + +G +A++ F+ +Q G
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 326 EPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL 385
PD +++ L ACSHAGL++EG F M +I PR+EH C+VDL RAG+++EA
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 386 DVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVG 445
I++M M+PNE V G+LL ACR + + L +L P YVLLSNIYA G
Sbjct: 467 RFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 526
Query: 446 KWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
+W+ +R MK +G++K PG S++E++ I+ F+ GD+SH ++ IY L++L +++
Sbjct: 527 RWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Query: 506 LCGYVPD 512
GYVPD
Sbjct: 587 ELGYVPD 593
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 134/308 (43%), Gaps = 24/308 (7%)
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
++ Y ++ A ++FDE P RN I +I +V + + ++ F M V PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
+ T +H T+ L + V N L+ MY +CG + AR V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSA-TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
D M R +VSWNS++VG+A N D+AL M+ D + L A S+
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TT 256
Query: 347 EGLR----IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVV 399
E + +F KM + ++ + ++ +Y + EA+++ M +P+ V
Sbjct: 257 ENVMYVKDMFFKMGKKSLVS-----WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVS 311
Query: 400 LGSLLAACRTKGEIGLAEKVMKYL--VELDPGGDSNYVL---LSNIYAAVGKWDGANKVR 454
+ S+L AC + L +K+ Y+ +L P N +L L ++YA G + A V
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIP----NLLLENALIDMYAKCGCLEKARDVF 367
Query: 455 RAMKDRGI 462
MK R +
Sbjct: 368 ENMKSRDV 375
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W I + ++ VEA + RM EP+ +++ ++L C S++S G +
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG---DTSALSLGKKI 331
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H Y + L + ++ + ALIDMYAK G ++ AR VF+ M R++VSW M+ Y SG
Sbjct: 332 HGYIERKKL-IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGR 390
Query: 177 IEDALQLFDEFP----VRNAISWTALIGGFVKKDHHKQALECFREM 218
DA+ LF + V ++I++ + ++ CF+ M
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 6/157 (3%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
VH ++ +D L+ N + L+ YA + AR+VFD + R ++ N +I + NG
Sbjct: 61 VHSRIILED-LRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY 368
E + F +M PD ++ L ACS +G I G +I +V +
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 369 GCLVDLYSRAGRLEEALDVIKNMPMKP----NEVVLG 401
G LV +Y + G L EA V+ M + N +V+G
Sbjct: 180 G-LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 233/400 (58%), Gaps = 4/400 (1%)
Query: 108 SSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTM 167
S V FG +H G D + V V T LI MY G + AR +FD+M ++++ WN +
Sbjct: 130 SDVWFGRQIHGQVVVFGFD-SSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNAL 188
Query: 168 LDGYMRSGEIEDALQLFDEFP--VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP 225
L GY + GE+++A L + P VRN +SWT +I G+ K +A+E F+ M + V P
Sbjct: 189 LAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEP 248
Query: 226 DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
D VT+ + V + V ++N++IDMYA+ G I A V
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYV-DHRGMNRAVSLNNAVIDMYAKSGNITKALDV 307
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
F+ + R +V+W +II G A +G EAL+ FN M K G P+ V++ L+ACSH G +
Sbjct: 308 FECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWV 367
Query: 346 DEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLA 405
D G R+FN M+ I P IEHYGC++DL RAG+L EA +VIK+MP K N + GSLLA
Sbjct: 368 DLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
Query: 406 ACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKK 465
A ++ L E+ + L++L+P NY+LL+N+Y+ +G+WD + +R MK G++K
Sbjct: 428 ASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKM 487
Query: 466 PGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
G SSIE+++ +YKF++GD +H + I+ L+ + ++Q
Sbjct: 488 AGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+WT I+ + +SG+ EA F RM VEP+ +TL+ +LS CA S+ G +
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADL---GSLELGERI 272
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
+Y G++ V + A+IDMYAKSGN+ A VF+ + RN+V+W T++ G G
Sbjct: 273 CSYVDHRGMN-RAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 177 IEDALQLFDEF 187
+AL +F+
Sbjct: 332 GAEALAMFNRM 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V WT+ IA G EA + F RM +A V PN++T I +LS C+H V G
Sbjct: 316 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHV---GWVDLGKR 372
Query: 116 VHAYAR-KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR-NLVSWNTML 168
+ R K G+ N G +ID+ ++G + A V M + N W ++L
Sbjct: 373 LFNSMRSKYGIHPNIEHYG-CMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL 426
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 294 bits (753), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 240/415 (57%), Gaps = 20/415 (4%)
Query: 100 GCA-----HYPSPSSVSFGATVHAYARKLGLDM-----------NDVKVGTALIDMYAKS 143
GCA P S VS+ A + Y R LD+ DV + A++D + KS
Sbjct: 130 GCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKS 189
Query: 144 GNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFV 203
G++ SAR +FD+M + +++W TM+ GY +I+ A +LFD P RN +SW +IGG+
Sbjct: 190 GDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYC 249
Query: 204 KKDHHKQALECFREMQ-LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDN 262
+ ++ + F+EMQ + + PD VT+ W H V + L
Sbjct: 250 QNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV-QRKKLDKK 308
Query: 263 VRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK 322
V+V +++DMY++CG IE A+++FD M + + SWN++I G+A NG A AL F +M
Sbjct: 309 VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMI 368
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLE 382
E +PD ++ +TAC+H GL++EG + F+ M+ + + +IEHYGC+VDL RAG L+
Sbjct: 369 EE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMG-LNAKIEHYGCMVDLLGRAGSLK 426
Query: 383 EALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYA 442
EA D+I NMP +PN ++L S L+AC +I AE+++K VEL+P D NYVLL N+YA
Sbjct: 427 EAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYA 486
Query: 443 AVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASL 497
A +WD V+ M+ +K+ G S IEI+ + +F++GD +H SI+ L
Sbjct: 487 ADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL 541
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 130/317 (41%), Gaps = 39/317 (12%)
Query: 180 ALQLFDEFPVRN-AISWTALIGGFVKKDHHKQALECFREMQL-SGVAPDYVTVXXXXXXX 237
A +LFD+ P R+ + ++I +++ + + +R+++ + APD T
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H + D + VS ++DMYA+ G + AR FD M HR+ VSW
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCAD-MYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSW 147
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM-- 355
++I G+ G D A F+ M D V Y + +G + R+F++M
Sbjct: 148 TALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTH 204
Query: 356 KRVRRIAPRIEHYGCLVDL------------------------YSRAGRLEEALDVIKNM 391
K V I Y + D+ Y + + +E + + + M
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 392 ----PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLV--ELDPGGDSNYVLLSNIYAAVG 445
+ P++V + S+L A G + L E ++ +LD +L ++Y+ G
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAIL-DMYSKCG 323
Query: 446 KWDGANKVRRAMKDRGI 462
+ + A ++ M ++ +
Sbjct: 324 EIEKAKRIFDEMPEKQV 340
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR--TMVSWNSIIVGFAANGLAD 311
M + +++ NV++ + + A I AR++FD R + +S NS+I +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 312 EALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGC 370
++ + + ++KE F PD ++T +CS + + +GL++ +++ R A G
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTG- 118
Query: 371 LVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKV 419
+VD+Y++ G++ A + MP + +EV +L++ GE+ LA K+
Sbjct: 119 VVDMYAKFGKMGCARNAFDEMPHR-SEVSWTALISGYIRCGELDLASKL 166
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 248/433 (57%), Gaps = 10/433 (2%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
V+W I+ + +G+ +A F RM +E+ ++ + T+++ LS C+ + ++ G
Sbjct: 112 VVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACS---ALKNLEIGE 168
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
++ + +M+ V++G AL+DM+ K G +D AR VFD M +N+ W +M+ GY+ +
Sbjct: 169 RIYRFVVT-EFEMS-VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVST 226
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G I++A LF+ PV++ + WTA++ G+V+ + +ALE FR MQ +G+ PD +
Sbjct: 227 GRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLL 286
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
W+H + D V V +L+DMYA+CGCIE A +VF + R
Sbjct: 287 TGCAQTGALEQGKWIHGYINENRVTVDKV-VGTALVDMYAKCGCIETALEVFYEIKERDT 345
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
SW S+I G A NG++ AL + M+ G D +++ LTAC+H G + EG +IF+
Sbjct: 346 ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHS 405
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEV---VLGSLLAACRTKG 411
M + P+ EH CL+DL RAG L+EA ++I M + +E V SLL+A R G
Sbjct: 406 MTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYG 465
Query: 412 EIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+ +AE+V + L +++ S + LL+++YA+ +W+ VRR MKD GIRK PG SSI
Sbjct: 466 NVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSI 525
Query: 472 EIDSSIYKFVAGD 484
EID ++F+ GD
Sbjct: 526 EIDGVGHEFIVGD 538
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 139/342 (40%), Gaps = 70/342 (20%)
Query: 79 FVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALID 138
F +R + P+N TL +L V G VH YA K GL+ D V +L+
Sbjct: 34 FGELRGQGLYPDNFTLPVVLKSIGRL---RKVIEGEKVHGYAVKAGLEF-DSYVSNSLMG 89
Query: 139 MYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTAL 198
MYA G +IE ++FDE P R+ +SW L
Sbjct: 90 MYASLG-------------------------------KIEITHKVFDEMPQRDVVSWNGL 118
Query: 199 IGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQD 257
I +V + A+ F+ M Q S + D T+ ++R V+T+
Sbjct: 119 ISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEF 178
Query: 258 SLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLA------- 310
+ +VR+ N+L+DM+ +CGC++ AR VFD M + + W S++ G+ + G
Sbjct: 179 EM--SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 311 ------------------------DEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
DEAL F MQ G PD LT C+ G ++
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
+G I + R ++ LVD+Y++ G +E AL+V
Sbjct: 297 QGKWIHGYINENRVTVDKVVGTA-LVDMYAKCGCIETALEVF 337
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 10/256 (3%)
Query: 210 QALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSL 269
+ L F E++ G+ PD T+ VH + + L+ + VSNSL
Sbjct: 29 KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV-KAGLEFDSYVSNSL 87
Query: 270 IDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPD 328
+ MYA G IEI +VFD M R +VSWN +I + NG ++A+ F M +E + D
Sbjct: 88 MGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFD 147
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
+ L+ACS ++ G RI+ + ++ RI + LVD++ + G L++A V
Sbjct: 148 EGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARAVF 205
Query: 389 KNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSN-YVLLSNIYAAVGKW 447
+M K N S++ + G I A + L E P D + + N Y ++
Sbjct: 206 DSMRDK-NVKCWTSMVFGYVSTGRIDEA----RVLFERSPVKDVVLWTAMMNGYVQFNRF 260
Query: 448 DGANKVRRAMKDRGIR 463
D A ++ R M+ GIR
Sbjct: 261 DEALELFRCMQTAGIR 276
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 227/376 (60%), Gaps = 4/376 (1%)
Query: 134 TALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAI 193
T LI YAK G + AR VFD+M R++ WN M+ GY R G+++ A++LFD P +N
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 194 SWTALIGGFVKKDHHKQALECFREMQL-SGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRL 252
SWT +I GF + ++ +AL+ F M+ V P+++TV +
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 253 VMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-LHRTMVSWNSIIVGFAANGLAD 311
++ DN+ V N+ I+MY++CG I++A+++F+ + R + SWNS+I A +G D
Sbjct: 241 A-RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 312 EALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCL 371
EAL+ F M +EG +PD V++ G L AC H G++ +G +F M+ V +I+P++EHYGC+
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 372 VDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGD 431
+DL R G+L+EA D+IK MPMKP+ VV G+LL AC G + +AE + L +L+P
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNP 419
Query: 432 SNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS-IEIDSSIYKFVAGDKSHEEN 490
N V++SNIYAA KWDG ++R+ MK + K G+S +E+ ++KF DKSH +
Sbjct: 420 GNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRS 479
Query: 491 GSIYASLELLSFELQL 506
IY LE + ++L
Sbjct: 480 YEIYQVLEEIFRRMKL 495
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
+WT+ I+ ++G EA F+ M ++ V+PN+IT++++L CA+ + G
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANL---GELEIGR 235
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMG-LRNLVSWNTMLDGYMR 173
+ YAR+ G +++ V A I+MY+K G +D A+ +F+++G RNL SWN+M+
Sbjct: 236 RLEGYARENGF-FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 174 SGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQ 219
G+ ++AL LF + +A+++ L+ V + E F+ M+
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 344
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/468 (34%), Positives = 255/468 (54%), Gaps = 8/468 (1%)
Query: 39 NTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRM--REAEVEPNNITLIT 96
+ N ++ + H +P V W + I RS A S F+ M V+P +T +
Sbjct: 73 DMNYAYLVFTRINHKNPFV-WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPS 131
Query: 97 LLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM 156
+ Y G +H K GL+ +D + ++ MY G + A +F M
Sbjct: 132 VFKA---YGRLGQARDGRQLHGMVIKEGLE-DDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 157 GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFR 216
++V+WN+M+ G+ + G I+ A LFDE P RN +SW ++I GFV+ K AL+ FR
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 217 EMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC 276
EMQ V PD T+ W+H ++ ++ + N V +LIDMY +C
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV-RNRFELNSIVVTALIDMYCKC 306
Query: 277 GCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGAL 336
GCIE VF+ + + WNS+I+G A NG + A+ F+ +++ G EPD VS+ G L
Sbjct: 307 GCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVL 366
Query: 337 TACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPN 396
TAC+H+G + F MK I P I+HY +V++ AG LEEA +IKNMP++ +
Sbjct: 367 TACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEED 426
Query: 397 EVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRA 456
V+ SLL+ACR G + +A++ K L +LDP YVLLSN YA+ G ++ A + R
Sbjct: 427 TVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLL 486
Query: 457 MKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFEL 504
MK+R + K+ G SSIE+D +++F++ +H ++ IY+ L++L++++
Sbjct: 487 MKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDV 534
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 288 bits (738), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 248/461 (53%), Gaps = 38/461 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT+ I+ + ++G EA + F M ++ +PN T T+L+ C S + G
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR---ASGLGLGKQ 174
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H K D + + VG++L+DMYAK+ G
Sbjct: 175 IHGLIVKWNYD-SHIFVGSSLLDMYAKA-------------------------------G 202
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+I++A ++F+ P R+ +S TA+I G+ + ++ALE F + G++P+YVT
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLT 262
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
H V+ ++ L + NSLIDMY++CG + AR++FD M RT +
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRE-LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAI 321
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
SWN+++VG++ +GL E L F M+ E +PD V+ L+ CSH + D GL IF+
Sbjct: 322 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDG 381
Query: 355 MKRVRR-IAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
M P EHYGC+VD+ RAGR++EA + IK MP KP VLGSLL ACR +
Sbjct: 382 MVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSV 441
Query: 414 GLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEI 473
+ E V + L+E++P NYV+LSN+YA+ G+W N VR M + + K+PG S I+
Sbjct: 442 DIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQH 501
Query: 474 DSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
+ +++ F A D++H + A ++ +S +++ GYVPD S
Sbjct: 502 EQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLS 542
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 2/226 (0%)
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+L Y + +EDA ++ DE P +N +SWTA+I + + H +AL F EM S P+
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPN 152
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
T +H L++ + ++ V +SL+DMYA+ G I+ AR++F
Sbjct: 153 EFTFATVLTSCIRASGLGLGKQIHGLIVKWN-YDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
+ + R +VS +II G+A GL +EAL F+ + EG P+ V+Y LTA S L+D
Sbjct: 212 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP 392
G + + R R + L+D+YS+ G L A + NMP
Sbjct: 272 HGKQAHCHVLR-RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 6/177 (3%)
Query: 269 LIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
L+ Y +C C+E AR+V D M + +VSW ++I ++ G + EAL+ F M + +P+
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPN 152
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
++ LT+C A + G +I + + I L+D+Y++AG+++EA ++
Sbjct: 153 EFTFATVLTSCIRASGLGLGKQIHGLIVKW-NYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 389 KNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS-NYVLLSNIYAAV 444
+ +P + +VV S A ++GL E+ ++ L G S NYV +++ A+
Sbjct: 212 ECLPER--DVV--SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 252/466 (54%), Gaps = 17/466 (3%)
Query: 44 FSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEV-EPNNITLITLLSGCA 102
FS + + A++SS+ H S A S F M V PN+ +L
Sbjct: 83 FSFPNTHLYAAVLTAYSSSLPLHASS-----AFSFFRLMVNRSVPRPNHFIYPLVLKST- 136
Query: 103 HYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKS-GNVDSARLVFDQMGLRNL 161
P SS VH + K G + V V TAL+ YA S ++ AR +FD+M RN+
Sbjct: 137 --PYLSSAFSTPLVHTHLFKSGFHLY-VVVQTALLHSYASSVSHITLARQLFDEMSERNV 193
Query: 162 VSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QL 220
VSW ML GY RSG+I +A+ LF++ P R+ SW A++ + +A+ FR M
Sbjct: 194 VSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINE 253
Query: 221 SGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIE 280
+ P+ VTV +H +D L +V VSNSL+D+Y +CG +E
Sbjct: 254 PSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD-LSSDVFVSNSLVDLYGKCGNLE 312
Query: 281 IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK---EGFEPDGVSYTGALT 337
A VF +++ +WNS+I FA +G ++EA++ F M K +PD +++ G L
Sbjct: 313 EASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLN 372
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNE 397
AC+H GL+ +G F+ M I PRIEHYGCL+DL RAGR +EAL+V+ M MK +E
Sbjct: 373 ACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADE 432
Query: 398 VVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
+ GSLL AC+ G + LAE +K LV L+P +++N+Y +G W+ A + R+ +
Sbjct: 433 AIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMI 492
Query: 458 KDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLE-LLSF 502
K + K PG+S IEID+ +++F + DKSH E IY L+ L+SF
Sbjct: 493 KHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLISF 538
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 242/465 (52%), Gaps = 40/465 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W+++I+ + + G EA +M + ++PN +TLI++LSGCA S ++ G
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA---SVGALMHGKE 386
Query: 116 VHAYARKLGLDM------NDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLD 169
+H YA K +D+ ++ V LIDMYAK VD+AR +FD + +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE--------- 437
Query: 170 GYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM--QLSGVAPDY 227
R+ ++WT +IGG+ + +ALE EM + P+
Sbjct: 438 --------------------RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
T+ +H + + VSN LIDMYA+CG I AR VFD
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 288 GMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE 347
M+ + V+W S++ G+ +G +EAL F+ M++ GF+ DGV+ L ACSH+G+ID+
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 348 GLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
G+ FN+MK V ++P EHY CLVDL RAGRL AL +I+ MPM+P VV + L+ C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 408 RTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPG 467
R G++ L E + + EL D +Y LLSN+YA G+W ++R M+ +G++K+PG
Sbjct: 658 RIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717
Query: 468 FSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
S +E F GDK+H IY L ++ GYVP+
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPE 762
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 188/366 (51%), Gaps = 20/366 (5%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
V+W S I + + G+ A F RM E P+NITL+ +L CA S + S G
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA---SLGTHSLGK 249
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+H +A + + ++ VG L+DMYAK G +D A VF M ++++VSWN M+ GY +
Sbjct: 250 QLHCFAVTSEM-IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 175 GEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
G EDA++LF++ + ++W+A I G+ ++ +AL R+M SG+ P+ VT+
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 231 XXXXXXXXXXXXXXXXXWVH------RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
+H + + ++ D V N LIDMYA+C ++ AR
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 285 VFDGM--LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFE--PDGVSYTGALTACS 340
+FD + R +V+W +I G++ +G A++AL + M +E + P+ + + AL AC+
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 341 HAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVL 400
+ G +I R ++ A + CL+D+Y++ G + +A V NM M NEV
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTW 547
Query: 401 GSLLAA 406
SL+
Sbjct: 548 TSLMTG 553
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 192/455 (42%), Gaps = 97/455 (21%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W S I + +G + F M P+N T + C SSV G + HA
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI---SSVRCGESAHA 151
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
+ G +++V VG AL+ MY+ R +
Sbjct: 152 LSLVTGF-ISNVFVGNALVAMYS-------------------------------RCRSLS 179
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS-GVAPDYVTVXXXXXXX 237
DA ++FDE V + +SW ++I + K K ALE F M G PD +T+
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H +T + ++ N+ V N L+DMYA+CG ++ A VF M + +VSW
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N+++ G++ G ++A+ F MQ+E + D V+++ A++
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG------------------- 339
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIG 414
Y++ G EAL V + M +KPNEV L S+L+ C + G +
Sbjct: 340 -----------------YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 415 LAEKV----MKYLVEL--DPGGDSNYVL--LSNIYAAVGKWDGANKVRRAMKDRGIRKKP 466
+++ +KY ++L + GD N V+ L ++YA K D A RAM D
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA----RAMFD------- 431
Query: 467 GFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLS 501
S E D + + G + ++G +LELLS
Sbjct: 432 SLSPKERDVVTWTVMIG--GYSQHGDANKALELLS 464
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 249/459 (54%), Gaps = 38/459 (8%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMR-EAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
W + I + G + A S + MR VEP+ T YP
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHT----------YP------------ 125
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
+ K M DV++G + + +SG L++ Q N++L Y G++
Sbjct: 126 -FLIKAVTTMADVRLGETIHSVVIRSG---FGSLIYVQ---------NSLLHLYANCGDV 172
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
A ++FD+ P ++ ++W ++I GF + ++AL + EM G+ PD T+
Sbjct: 173 ASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSAC 232
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
VH + M + L N+ SN L+D+YARCG +E A+ +FD M+ + VSW
Sbjct: 233 AKIGALTLGKRVH-VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 291
Query: 298 NSIIVGFAANGLADEALSFFNSMQK-EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
S+IVG A NG EA+ F M+ EG P +++ G L ACSH G++ EG F +M+
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 351
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+I PRIEH+GC+VDL +RAG++++A + IK+MPM+PN V+ +LL AC G+ LA
Sbjct: 352 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
E +++L+P +YVLLSN+YA+ +W K+R+ M G++K PG S +E+ +
Sbjct: 412 EFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNR 471
Query: 477 IYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFSD 515
+++F+ GDKSH ++ +IYA L+ ++ L+ GYVP S+
Sbjct: 472 VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 510
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 147/317 (46%), Gaps = 31/317 (9%)
Query: 108 SSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTM 167
SS++ +HA++ + G+ ++D ++G LI L +L S M
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLI------------------FYLVSLPSPPPM 69
Query: 168 LDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-VAPD 226
+ +IE + +F W LI G+ + + A +REM++SG V PD
Sbjct: 70 SYAHKVFSKIEKPINVF---------IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPD 120
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
T +H +V+ + + V NSL+ +YA CG + A +VF
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVI-RSGFGSLIYVQNSLLHLYANCGDVASAYKVF 179
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
D M + +V+WNS+I GFA NG +EAL+ + M +G +PDG + L+AC+ G +
Sbjct: 180 DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
G R+ M +V + + L+DLY+R GR+EEA + M K N V SL+
Sbjct: 240 LGKRVHVYMIKV-GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVG 297
Query: 407 CRTKGEIGLAEKVMKYL 423
G A ++ KY+
Sbjct: 298 LAVNGFGKEAIELFKYM 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 47/278 (16%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
VAW S I +G+ EA + + M ++P+ T+++LLS CA +++ G V
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI---GALTLGKRV 244
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H Y K+GL N + L+D+YA+ G V+ A+ +FD+M +N VSW +++ G +G
Sbjct: 245 HVYMIKVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 303
Query: 177 IEDALQLFD-----EFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
++A++LF E + I++ ++ K+ E FR M+
Sbjct: 304 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR------------ 351
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-L 290
+ ++ + ++D+ AR G ++ A + M +
Sbjct: 352 -----------------------EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
+V W +++ +G D L+ F +Q EP+
Sbjct: 389 QPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPN 424
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 242/431 (56%), Gaps = 8/431 (1%)
Query: 87 VEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNV 146
+ P++ L+ CA+ S+ G VH + + ND V ++L+DMYAK G +
Sbjct: 101 LRPDDFVFSALVKACANL---GSIDHGRQVHCHF-IVSEYANDEVVKSSLVDMYAKCGLL 156
Query: 147 DSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKD 206
+SA+ VFD + ++N +SW M+ GY +SG E+AL+LF PV+N SWTALI GFV+
Sbjct: 157 NSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSG 216
Query: 207 HHKQALECFREMQLSGV-APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRV 265
+A F EM+ V D + + VH LV+ V +
Sbjct: 217 KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIAL-GFDSCVFI 275
Query: 266 SNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGF 325
SN+LIDMYA+C + A+ +F M HR +VSW S+IVG A +G A++AL+ ++ M G
Sbjct: 276 SNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGV 335
Query: 326 EPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL 385
+P+ V++ G + ACSH G +++G +F M + I P ++HY CL+DL R+G L+EA
Sbjct: 336 KPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAE 395
Query: 386 DVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGD-SNYVLLSNIYAAV 444
++I MP P+E +LL+AC+ +G + ++ +LV D S Y+LLSNIYA+
Sbjct: 396 NLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASA 455
Query: 445 GKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFEL 504
W ++ RR + + +RK PG SS+E+ F AG+ SH I+ L+ L E+
Sbjct: 456 SLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEM 515
Query: 505 QL-CGYVPDFS 514
++ GYVPD S
Sbjct: 516 RIRNGYVPDTS 526
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQAL-ECFREMQLSGV 223
NT+++ Y + G ALQ+FDE P R+ I+W +++ + + + L SG+
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
PD VH + + D V V +SL+DMYA+CG + A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV-VKSSLVDMYAKCGLLNSAK 160
Query: 284 QVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
VFD + + +SW +++ G+A +G +EAL F + + S+T ++ +G
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALISGFVQSG 216
Query: 344 LIDEGLRIFNKMKRVR 359
E +F +M+R R
Sbjct: 217 KGLEAFSVFTEMRRER 232
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 45/191 (23%)
Query: 56 TVAWTSSIAHHCRSGQL-------------------------------VEAASTFVRMRE 84
T++WT+ ++ + +SG+ +EA S F MR
Sbjct: 171 TISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRR 230
Query: 85 AEVEP-NNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKS 143
V+ + + L +++ CA+ + + G VH LG D + V + ALIDMYAK
Sbjct: 231 ERVDILDPLVLSSIVGACANLAASIA---GRQVHGLVIALGFD-SCVFISNALIDMYAKC 286
Query: 144 GNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALI 199
+V +A+ +F +M R++VSW +++ G + G+ E AL L+D+ N +++ LI
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 200 -----GGFVKK 205
GFV+K
Sbjct: 347 YACSHVGFVEK 357
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 33/162 (20%)
Query: 265 VSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEAL-SFFNSMQKE 323
++N+L+++Y +CG A QVFD M HR ++W S++ L+ + L F +
Sbjct: 40 LANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSS 99
Query: 324 GFEPDGVSYTGALTACSHAGLIDEGLRI----------------------------FNKM 355
G PD ++ + AC++ G ID G ++ N
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 356 KRVR---RIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
K V R+ I + +V Y+++GR EEAL++ + +P+K
Sbjct: 160 KAVFDSIRVKNTIS-WTAMVSGYAKSGRKEEALELFRILPVK 200
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 263/511 (51%), Gaps = 33/511 (6%)
Query: 30 NPTFSPYNPNTN-QSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVE 88
N S Y N+ + + ++ V+W + + ++VEA F M +V
Sbjct: 192 NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV- 250
Query: 89 PNNITLITLLSGCAHY-------------PSPSSVSFGATVHAY--------ARKLGLDM 127
++ T+++G A P ++ A V Y AR+L M
Sbjct: 251 ---VSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 128 ---NDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLF 184
N+V A++ Y + ++ A+ +FD M RN+ +WNTM+ GY + G+I +A LF
Sbjct: 308 PERNEVS-WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 185 DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXX 244
D+ P R+ +SW A+I G+ + H +AL F +M+ G + +
Sbjct: 367 DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE 426
Query: 245 XXXWVH-RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVG 303
+H RLV + + V N+L+ MY +CG IE A +F M + +VSWN++I G
Sbjct: 427 LGKQLHGRLV--KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484
Query: 304 FAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAP 363
++ +G + AL FF SM++EG +PD + L+ACSH GL+D+G + F M + + P
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544
Query: 364 RIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
+HY C+VDL RAG LE+A +++KNMP +P+ + G+LL A R G LAE +
Sbjct: 545 NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKI 604
Query: 424 VELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAG 483
++P YVLLSN+YA+ G+W K+R M+D+G++K PG+S IEI + + F G
Sbjct: 605 FAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVG 664
Query: 484 DKSHEENGSIYASLELLSFELQLCGYVPDFS 514
D+ H E I+A LE L ++ GYV S
Sbjct: 665 DEFHPEKDEIFAFLEELDLRMKKAGYVSKTS 695
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 174/370 (47%), Gaps = 55/370 (14%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAH------------- 103
V+W I + R+ L +A F M E +V N T+LSG A
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWN----TMLSGYAQNGCVDDARSVFDR 182
Query: 104 YPSPSSVSFGATVHAYARKLGLD----MNDVKVGTALIDM------YAKSGNVDSARLVF 153
P + VS+ A + AY + ++ + + AL+ + K + AR F
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 154 DQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALE 213
D M +R++VSWNT++ GY +SG+I++A QLFDE PV++ +WTA++ G+++ ++A E
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 214 CFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLK----DNVRVSNSL 269
F +M P+ V R+ M ++ NV N++
Sbjct: 303 LFDKM------PERNEVSWNAMLAGYVQG-------ERMEMAKELFDVMPCRNVSTWNTM 349
Query: 270 IDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDG 329
I YA+CG I A+ +FD M R VSW ++I G++ +G + EAL F M++EG +
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 330 VSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVD-----LYSRAGRLEEA 384
S++ AL+ C+ ++ G ++ R+ GC V +Y + G +EEA
Sbjct: 410 SSFSSALSTCADVVALELGKQLHG------RLVKGGYETGCFVGNALLLMYCKCGSIEEA 463
Query: 385 LDVIKNMPMK 394
D+ K M K
Sbjct: 464 NDLFKEMAGK 473
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 180/430 (41%), Gaps = 47/430 (10%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSG--------CAHYPSPSS 109
W +I+ + R+G+ EA F RM R + V N + L +G P
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 110 VSFGATVHAYARKLGLDM----------NDVKVGTALIDMYAKSGNVDSARLVFDQMGLR 159
VS+ + Y R L DV ++ YA++G VD AR VFD+M +
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
N VSWN +L Y+++ ++E+A LF +SW L+GGFVKK +A + F M
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
+ V + R + + ++D V +++ Y + +
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEA--------RQLFDESPVQD-VFTWTAMVSGYIQNRMV 297
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
E AR++FD M R VSWN+++ G+ + A F+ M ++ +T
Sbjct: 298 EEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGY 353
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPM---KPN 396
+ G I E +F+KM + ++ + ++ YS++G EAL + M + N
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVS-----WAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 397 EVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSN----IYAAVGKWDGANK 452
S L+ C + L +++ LV+ GG + N +Y G + AN
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVK---GGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 453 VRRAMKDRGI 462
+ + M + I
Sbjct: 466 LFKEMAGKDI 475
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 34/324 (10%)
Query: 128 NDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEF 187
+D+K I Y ++G + A VF +M + VS+N M+ GY+R+GE E A +LFDE
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 188 PVRNAISWTALIGGFVKKDHHKQALECFREM----------QLSGVAPDYVTVXXXXXXX 237
P R+ +SW +I G+V+ + +A E F M LSG A + V
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN-GCVDDARSVF 180
Query: 238 XXXXXXXXXXW------------VHRLVMTQDSLKDNVRVS-NSLIDMYARCGCIEIARQ 284
W + M S ++ VS N L+ + + I ARQ
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
FD M R +VSWN+II G+A +G DEA F+ E D ++T ++ +
Sbjct: 241 FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMVSGYIQNRM 296
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
++E +F+KM ++ + ++ Y + R+E A ++ MP + N +++
Sbjct: 297 VEEARELFDKMPERNEVS-----WNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMI 350
Query: 405 AACRTKGEIGLAEKVMKYLVELDP 428
G+I A+ + + + DP
Sbjct: 351 TGYAQCGKISEAKNLFDKMPKRDP 374
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 42/277 (15%)
Query: 157 GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFR 216
G ++ WN + YMR+G +AL++F P +++S+ +I G+++ + A + F
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 217 EMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC 276
EM D V+ + ++ +D V N+++ YA+
Sbjct: 120 EMP----ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD-----VCSWNTMLSGYAQN 170
Query: 277 GCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ--------------- 321
GC++ AR VFD M + VSWN+++ + N +EA F S +
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 322 --------KEGFEP----DGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG 369
++ F+ D VS+ +T + +G IDE ++F++ + +
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESP-----VQDVFTWT 285
Query: 370 CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
+V Y + +EEA ++ MP + NEV ++LA
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPER-NEVSWNAMLAG 321
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 220/378 (58%), Gaps = 2/378 (0%)
Query: 129 DVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFP 188
D+ + +I Y + GN+ AR +FDQM R+++SWNT+L+GY G++E ++FD+ P
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 189 VRNAISWTALIGGFVKKDHHKQALECFREMQLSG-VAPDYVTVXXXXXXXXXXXXXXXXX 247
RN SW LI G+ + + L F+ M G V P+ T+
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 248 WVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAAN 307
WVH+ T K +V V N+LIDMY +CG IEIA +VF G+ R ++SWN++I G AA+
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAH 268
Query: 308 GLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEH 367
G EAL+ F+ M+ G PD V++ G L AC H GL+++GL FN M I P IEH
Sbjct: 269 GHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEH 328
Query: 368 YGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELD 427
GC+VDL SRAG L +A++ I MP+K + V+ +LL A + ++ + E ++ L++L+
Sbjct: 329 CGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLE 388
Query: 428 PGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSH 487
P +N+V+LSNIY G++D A +++ AM+D G +K+ G S IE D + KF + + H
Sbjct: 389 PRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKH 448
Query: 488 EENGSIYASL-ELLSFEL 504
+ L EL SF +
Sbjct: 449 PRTEELQRILRELKSFNI 466
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 81/173 (46%), Gaps = 35/173 (20%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
+W I + ++G++ E +F RM E V PN+ T+ +LS CA + FG V
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL---GAFDFGKWV 210
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H Y LG + DV V ALIDMY K G ++ A VF + R+L+SWNTM++G G
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG- 269
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
H +AL F EM+ SG++PD VT
Sbjct: 270 ------------------------------HGTEALNLFHEMKNSGISPDKVT 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 257 DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSF 316
+ ++ NV + S+I+ Y + AR+ FD R +V WN++I G+ G EA S
Sbjct: 53 EMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSL 112
Query: 317 FNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYS 376
F+ M D +S+ L ++ G ++ R+F+ M + + L+ Y+
Sbjct: 113 FDQMPCR----DVMSWNTVLEGYANIGDMEACERVFDDMPE-----RNVFSWNGLIKGYA 163
Query: 377 RAGRLEEALDVIKNM----PMKPNEVVLGSLLAACRTKGEIGLAEKVMKY 422
+ GR+ E L K M + PN+ + +L+AC G + V KY
Sbjct: 164 QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 229/390 (58%), Gaps = 14/390 (3%)
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDE 186
M DV++G + + +SG L++ Q N++L Y G++ A ++FD+
Sbjct: 1 MADVRLGETIHSVVIRSG---FGSLIYVQ---------NSLLHLYANCGDVASAYKVFDK 48
Query: 187 FPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
P ++ ++W ++I GF + ++AL + EM G+ PD T+
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAA 306
VH + M + L N+ SN L+D+YARCG +E A+ +FD M+ + VSW S+IVG A
Sbjct: 109 KRVH-VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 167
Query: 307 NGLADEALSFFNSMQK-EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRI 365
NG EA+ F M+ EG P +++ G L ACSH G++ EG F +M+ +I PRI
Sbjct: 168 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 227
Query: 366 EHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE 425
EH+GC+VDL +RAG++++A + IK+MPM+PN V+ +LL AC G+ LAE +++
Sbjct: 228 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 287
Query: 426 LDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDK 485
L+P +YVLLSN+YA+ +W K+R+ M G++K PG S +E+ + +++F+ GDK
Sbjct: 288 LEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDK 347
Query: 486 SHEENGSIYASLELLSFELQLCGYVPDFSD 515
SH ++ +IYA L+ ++ L+ GYVP S+
Sbjct: 348 SHPQSDAIYAKLKEMTGRLRSEGYVPQISN 377
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 47/278 (16%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
VAW S I +G+ EA + + M ++P+ T+++LLS CA +++ G V
Sbjct: 55 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA---KIGALTLGKRV 111
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H Y K+GL N + L+D+YA+ G V+ A+ +FD+M +N VSW +++ G +G
Sbjct: 112 HVYMIKVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 170
Query: 177 IEDALQLFD-----EFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
++A++LF E + I++ ++ K+ E FR M+
Sbjct: 171 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR------------ 218
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-L 290
+ ++ + ++D+ AR G ++ A + M +
Sbjct: 219 -----------------------EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 255
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
+V W +++ +G D L+ F +Q EP+
Sbjct: 256 QPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPN 291
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 245/459 (53%), Gaps = 8/459 (1%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
VA+ + I+ + G EA RM + +E + T +++ CA + + G V
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACA---TAGLLQLGKQV 308
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HAY L + +L+ +Y K G D AR +F++M ++LVSWN +L GY+ SG
Sbjct: 309 HAYV--LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP-DYVTVXXXXX 235
I +A +F E +N +SW +I G + ++ L+ F M+ G P DY
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+ +L+ + ++ N+LI MYA+CG +E ARQVF M V
Sbjct: 427 CAVLGAYCNGQQYHAQLL--KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSV 484
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN++I +G EA+ + M K+G PD ++ LTACSHAGL+D+G + F+ M
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
+ V RI P +HY L+DL R+G+ +A VI+++P KP + +LL+ CR G + L
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
L L P D Y+LLSN++AA G+W+ +VR+ M+DRG++K+ S IE+++
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
++ F+ D SH E ++Y L+ L E++ GYVPD S
Sbjct: 665 QVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTS 703
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 200/473 (42%), Gaps = 84/473 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP--SPSSVSFG 113
TV + + I + A + F +M+ +P+N T ++L+G A V F
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF- 171
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGN----VDSARLVFDQMGLRNLVSWNTMLD 169
HA A K G V AL+ +Y+K + + SAR VFD++ ++ SW TM+
Sbjct: 172 ---HAAALKSGAGY-ITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 170 GYMRSGEIEDALQLFDEFPVR-NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
GY+++G + +L + +++ A+I G+V + +++ALE R M SG+ D
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T VH V+ ++ + NSL+ +Y +CG + AR +F+
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFDEARAIFEK 345
Query: 289 MLHRTMVSWNSI-------------------------------IVGFAANGLADEALSFF 317
M + +VSWN++ I G A NG +E L F
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 318 NSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSR 377
+ M++EGFEP +++GA+ +C+ G G + ++ ++ + L+ +Y++
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAK 464
Query: 378 AGRLEEALDVIKNMP----------------------------------MKPNEVVLGSL 403
G +EEA V + MP ++P+ + L ++
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 404 LAACRTKGEIGLAEKV---MKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKV 453
L AC G + K M+ + + PG D +Y L ++ GK+ A V
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGAD-HYARLIDLLCRSGKFSDAESV 576
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 143/328 (43%), Gaps = 41/328 (12%)
Query: 136 LIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPV--RNAI 193
LID+Y KS ++ AR +FD++ + ++ TM+ GY SG+I A +F++ PV R+ +
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
+ A+I GF + A+ F +M+ G PD T
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA 174
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGC----IEIARQVFDGMLHRTMVSWNSIIVGFAANGL 309
+ VSN+L+ +Y++C + AR+VFD +L + SW +++ G+ NG
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 310 AD--------------------------------EALSFFNSMQKEGFEPDGVSYTGALT 337
D EAL M G E D +Y +
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNE 397
AC+ AGL+ G ++ + R + ++ LV LY + G+ +EA + + MP K +
Sbjct: 295 ACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAK-DL 351
Query: 398 VVLGSLLAACRTKGEIGLAEKVMKYLVE 425
V +LL+ + G IG A+ + K + E
Sbjct: 352 VSWNALLSGYVSSGHIGEAKLIFKEMKE 379
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 258/529 (48%), Gaps = 81/529 (15%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSS---VSFG 113
V+W + +A + ++G A M E ++P+ IT++++L P+ S+ +S G
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVL------PAVSALRLISVG 255
Query: 114 ATVHAYARKLGLDMNDVKVGTAL-------------------------------IDMYAK 142
+H YA + G D + V + TAL ID Y +
Sbjct: 256 KEIHGYAMRSGFD-SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 143 SGNVDSARLVFDQM--------------------------------------GL-RNLVS 163
+ N A L+F +M GL RN+
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 164 WNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
N+++ Y + E++ A +F + R +SW A+I GF + AL F +M+ V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
PD T W+H +VM + L NV V+ +L+DMYA+CG I IAR
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVM-RSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 284 QVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
+FD M R + +WN++I G+ +G AL F MQK +P+GV++ ++ACSH+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSL 403
L++ GL+ F MK I ++HYG +VDL RAGRL EA D I MP+KP V G++
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 404 LAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
L AC+ + AEK + L EL+P +VLL+NIY A W+ +VR +M +G+R
Sbjct: 614 LGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLR 673
Query: 464 KKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
K PG S +EI + ++ F +G +H ++ IYA LE L ++ GYVPD
Sbjct: 674 KTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD 722
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 152/351 (43%), Gaps = 45/351 (12%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V + + + + L +A FVRMR +VEP LL C + + G +
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG---DEAELRVGKEI 157
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H K G + D+ T L +MYAK V+ AR
Sbjct: 158 HGLLVKSGFSL-DLFAMTGLENMYAKCRQVNEAR-------------------------- 190
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
++FD P R+ +SW ++ G+ + + ALE + M + P ++T+
Sbjct: 191 -----KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 237 XXXXXXXXXXXWVHRLVMTQ--DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H M DSL V +S +L+DMYA+CG +E ARQ+FDGML R +
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSL---VNISTALVDMYAKCGSLETARQLFDGMLERNV 302
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
VSWNS+I + N EA+ F M EG +P VS GAL AC+ G ++ G R +K
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHK 361
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKP----NEVVLG 401
+ + + L+ +Y + ++ A + + + N ++LG
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 246/471 (52%), Gaps = 40/471 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V WT+ + + SG+ EA F +M E V+P++ ++ +LS C H S G
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDS---GEW 233
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+ Y ++ + N V T L+++YAK G
Sbjct: 234 IVKYMEEMEMQKNSF-VRTTLVNLYAKCG------------------------------- 261
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++E A +FD ++ ++W+ +I G+ K+ +E F +M + PD ++
Sbjct: 262 KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLS 321
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
W L+ + L N+ ++N+LIDMYA+CG + +VF M + +V
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLT-NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
N+ I G A NG + + F +K G PDG ++ G L C HAGLI +GLR FN +
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
V + +EHYGC+VDL+ RAG L++A +I +MPM+PN +V G+LL+ CR + L
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
AE V+K L+ L+P NYV LSNIY+ G+WD A +VR M +G++K PG+S IE++
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD----FSDKETYEDD 522
+++F+A DKSH + IYA LE L E++L G+VP F D E E +
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKE 611
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 149/307 (48%), Gaps = 24/307 (7%)
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
A A +RKLG+D++ + V N D A + ++L Y
Sbjct: 120 ACTRASSRKLGIDLHSLVVKCGF--------NHDVAAM-------------TSLLSIYSG 158
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
SG + DA +LFDE P R+ ++WTAL G+ H++A++ F++M GV PD +
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
W+ + M + ++ N V +L+++YA+CG +E AR VFD M+ +
Sbjct: 219 LSACVHVGDLDSGEWIVK-YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKD 277
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+V+W+++I G+A+N E + F M +E +PD S G L++C+ G +D G +
Sbjct: 278 IVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGIS 337
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
+ R + L+D+Y++ G + +V K M K + V++ + ++ G +
Sbjct: 338 LIDR-HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK-DIVIMNAAISGLAKNGHV 395
Query: 414 GLAEKVM 420
L+ V
Sbjct: 396 KLSFAVF 402
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 34/200 (17%)
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGL------- 349
+NS+I GF N L E L F S++K G G ++ L AC+ A G+
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 350 ----------------------RIFNKMKRVRRIAPR-IEHYGCLVDLYSRAGRLEEALD 386
R+ + K I R + + L Y+ +GR EA+D
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 387 VIKNMP---MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNY-VLLSNIYA 442
+ K M +KP+ + +L+AC G++ E ++KY+ E++ +S L N+YA
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 443 AVGKWDGANKVRRAMKDRGI 462
GK + A V +M ++ I
Sbjct: 259 KCGKMEKARSVFDSMVEKDI 278
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 251/483 (51%), Gaps = 45/483 (9%)
Query: 62 SIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYAR 121
+ +H RS +L +VRM V P++ T +L+ S + FG ++ A+
Sbjct: 848 TCSHPIRSLEL------YVRMLRDSVSPSSYTYSSLVKA-----SSFASRFGESLQAHIW 896
Query: 122 KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTM-------------- 167
K G + VK+ T LID Y+ +G + AR VFD+M R+ ++W TM
Sbjct: 897 KFGFGFH-VKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSAN 955
Query: 168 -----------------LDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQ 210
++GYM G +E A LF++ PV++ ISWT +I G+ + +++
Sbjct: 956 SLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYRE 1015
Query: 211 ALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLI 270
A+ F +M G+ PD VT+ VH + Q+ +V + ++L+
Sbjct: 1016 AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL-QNGFVLDVYIGSALV 1074
Query: 271 DMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGV 330
DMY++CG +E A VF + + + WNSII G AA+G A EAL F M+ E +P+ V
Sbjct: 1075 DMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAV 1134
Query: 331 SYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKN 390
++ TAC+HAGL+DEG RI+ M I +EHYG +V L+S+AG + EAL++I N
Sbjct: 1135 TFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGN 1194
Query: 391 MPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGA 450
M +PN V+ G+LL CR + +AE L+ L+P Y LL ++YA +W
Sbjct: 1195 MEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDV 1254
Query: 451 NKVRRAMKDRGIRKK-PGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGY 509
++R M++ GI K PG SSI ID + F A DKSH + + L+ + ++ L GY
Sbjct: 1255 AEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGY 1314
Query: 510 VPD 512
V +
Sbjct: 1315 VQE 1317
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 151/355 (42%), Gaps = 76/355 (21%)
Query: 39 NTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLL 98
N Q+ SL N ++WT+ I + ++ + EA + F +M E + P+ +T+ T++
Sbjct: 981 NLEQAESL-FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 99 SGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL 158
S CAH + G VH Y + G + DV +G+AL+DMY+K G+++ A LVF +
Sbjct: 1040 SACAHL---GVLEIGKEVHMYTLQNGFVL-DVYIGSALVDMYSKCGSLERALLVFFNLPK 1095
Query: 159 RNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM 218
+NL WN++++G G ++AL++ F +M
Sbjct: 1096 KNLFCWNSIIEGLAAHGFAQEALKM-------------------------------FAKM 1124
Query: 219 QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDN-VRVSNSLIDMYARCG 277
++ V P+ VT T L D R+ S+ID Y+
Sbjct: 1125 EMESVKPNAVTFVSVFT-----------------ACTHAGLVDEGRRIYRSMIDDYSIVS 1167
Query: 278 CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALT 337
+E + GM+H F+ GL EAL +M+ FEP+ V + L
Sbjct: 1168 NVE----HYGGMVHL-----------FSKAGLIYEALELIGNME---FEPNAVIWGALLD 1209
Query: 338 ACS-HAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
C H L+ + FNK+ + + +Y LV +Y+ R + ++ M
Sbjct: 1210 GCRIHKNLVIAEI-AFNKLMVLEPMNSG--YYFLLVSMYAEQNRWRDVAEIRGRM 1261
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 129/336 (38%), Gaps = 76/336 (22%)
Query: 191 NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVH 250
N + AL GFV H ++LE + M V+P T H
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH 894
Query: 251 RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGF------ 304
+ + +V++ +LID Y+ G I AR+VFD M R ++W +++ +
Sbjct: 895 ---IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDM 951
Query: 305 -AANGLA------------------------DEALSFFNS-------------------- 319
+AN LA ++A S FN
Sbjct: 952 DSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNK 1011
Query: 320 -----------MQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY 368
M +EG PD V+ + ++AC+H G+++ G + M ++ +
Sbjct: 1012 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV--HMYTLQNGFVLDVYI 1069
Query: 369 G-CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELD 427
G LVD+YS+ G LE AL V N+P K N S++ G A++ +K +++
Sbjct: 1070 GSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAH---GFAQEALKMFAKME 1125
Query: 428 -PGGDSNYVLLSNIYAA---VGKWDGANKVRRAMKD 459
N V +++ A G D ++ R+M D
Sbjct: 1126 MESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMID 1161
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 233/447 (52%), Gaps = 35/447 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W S + G+ +A + M E +P+ T I L + C +P +++ G
Sbjct: 221 VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC---QNPETLTQGRL 277
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H++A LG D D++ I MY+KS + SARL
Sbjct: 278 IHSHAIHLGTD-QDIEAINTFISMYSKSEDTCSARL------------------------ 312
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
LFD R +SWT +I G+ +K +AL F M SG PD VT+
Sbjct: 313 -------LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
W+ +DNV + N+LIDMY++CG I AR +FD +T+V
Sbjct: 366 GCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+W ++I G+A NG+ EAL F+ M ++P+ +++ L AC+H+G +++G F+ M
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
K+V I+P ++HY C+VDL R G+LEEAL++I+NM KP+ + G+LL AC+ + +
Sbjct: 486 KQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKI 545
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
AE+ + L L+P + YV ++NIYAA G WDG ++R MK R I+K PG S I+++
Sbjct: 546 AEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNG 605
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSF 502
+ F G+ H EN IY +L LS
Sbjct: 606 KNHSFTVGEHGHVENEVIYFTLNGLSL 632
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 194/456 (42%), Gaps = 99/456 (21%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W + ++ C+SG +A S F MR E+ P+++T++TL+ + S+ +HA
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF---EKSLKLLEAMHA 177
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM--GLRNLVSWNTMLDGYMRSGE 176
+LG+D+ V V I Y K G++DSA+LVF+ + G R +VSWN+M Y GE
Sbjct: 178 VGIRLGVDVQ-VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE 236
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
DA L+ + ++ K L F + S P+ +T
Sbjct: 237 AFDAFGLY----------------CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHS 280
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
H + + D ++ N+ I MY++ AR +FD M RT VS
Sbjct: 281 -------------HAIHLGTDQ---DIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS 324
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W +I G+A G DEAL+ F++M K G +PD V+ ++ C G ++ G
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-------- 376
Query: 357 RVRRIAPRIEHYGC----------LVDLYSRAGRLEEALDVIKNMP-------------- 392
+ I R + YGC L+D+YS+ G + EA D+ N P
Sbjct: 377 --KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 434
Query: 393 --------------------MKPNEVVLGSLLAACRTKGEIGLAEK---VMKYLVELDPG 429
KPN + ++L AC G + + +MK + + PG
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG 494
Query: 430 GDSNYVLLSNIYAAVGKWDGANKVRRAMK---DRGI 462
D +Y + ++ GK + A ++ R M D GI
Sbjct: 495 LD-HYSCMVDLLGRKGKLEEALELIRNMSAKPDAGI 529
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 158/391 (40%), Gaps = 71/391 (18%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
AW I VE+ F M+ EPNN T + CA + V VH
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL---ADVGCCEMVH 75
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
A+ K +DV VGTA +DM+ K +VD A VF++M R+ +WN ML G+ +SG
Sbjct: 76 AHLIKSPF-WSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG-- 132
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
H +A FREM+L+ + PD VTV
Sbjct: 133 -----------------------------HTDKAFSLFREMRLNEITPDSVTVMTLIQSA 163
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH--RTMV 295
+H V + + V V+N+ I Y +CG ++ A+ VF+ + RT+V
Sbjct: 164 SFEKSLKLLEAMHA-VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWNS+ ++ G A +A + M +E F+PD ++ +C + + +G I +
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 356 ------KRVRRIAPRIEHYG------------------------CLVDLYSRAGRLEEAL 385
+ + I I Y ++ Y+ G ++EAL
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 386 DVIKNMPM---KPNEVVLGSLLAACRTKGEI 413
+ M KP+ V L SL++ C G +
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 248/464 (53%), Gaps = 36/464 (7%)
Query: 49 NTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPS 108
N+ TV+W S I+ + +SG L+EA F M E + ++IT + L+S +
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL---A 422
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTML 168
+ FG +H+ K G+ + D+ V ALIDMYAK
Sbjct: 423 DLKFGKGLHSNGIKSGICI-DLSVSNALIDMYAKC------------------------- 456
Query: 169 DGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
GE+ D+L++F + ++W +I V+ L+ +M+ S V PD
Sbjct: 457 ------GEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMA 510
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T +H + + + +++ N+LI+MY++CGC+E + +VF+
Sbjct: 511 TFLVTLPMCASLAAKRLGKEIH-CCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER 569
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
M R +V+W +I + G ++AL F M+K G PD V + + ACSH+GL+DEG
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACR 408
L F KMK +I P IEHY C+VDL SR+ ++ +A + I+ MP+KP+ + S+L ACR
Sbjct: 630 LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACR 689
Query: 409 TKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGF 468
T G++ AE+V + ++EL+P +L SN YAA+ KWD + +R+++KD+ I K PG+
Sbjct: 690 TSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGY 749
Query: 469 SSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
S IE+ +++ F +GD S ++ +IY SLE+L + GY+PD
Sbjct: 750 SWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD 793
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 175/383 (45%), Gaps = 40/383 (10%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W S I ++G EA + ++RE++V P+ T +++ CA G V+
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA---GLFDAEMGDLVYE 130
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
+G + +D+ VG AL+DMY+ R G +
Sbjct: 131 QILDMGFE-SDLFVGNALVDMYS-------------------------------RMGLLT 158
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
A Q+FDE PVR+ +SW +LI G+ ++++ALE + E++ S + PD TV
Sbjct: 159 RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG 218
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
+H + + + V V+N L+ MY + AR+VFD M R VS+N
Sbjct: 219 NLLVVKQGQGLHGFAL-KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYN 277
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRV 358
++I G+ + +E++ F + F+PD ++ + L AC H + I+N M +
Sbjct: 278 TMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA 336
Query: 359 RRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEK 418
+ L+D+Y++ G + A DV +M K + V S+++ G++ A K
Sbjct: 337 GFVLESTVR-NILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMK 394
Query: 419 VMKYLVELDPGGDS-NYVLLSNI 440
+ K ++ ++ D Y++L ++
Sbjct: 395 LFKMMMIMEEQADHITYLMLISV 417
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 152/326 (46%), Gaps = 35/326 (10%)
Query: 167 MLDGYMRSGEIEDALQLFDEF-PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP 225
++D Y E +L +F P +N W ++I F K +ALE + +++ S V+P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 226 DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
D T V+ ++ + ++ V N+L+DMY+R G + ARQV
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
FD M R +VSWNS+I G++++G +EAL ++ ++ PD + + L A + ++
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 346 DEG----------------------LRIFNKMKR---VRRIAPRIE-----HYGCLVDLY 375
+G + ++ K +R RR+ ++ Y ++ Y
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 376 SRAGRLEEALDV-IKNM-PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSN 433
+ +EE++ + ++N+ KP+ + + S+L AC ++ LA+ + Y+++ +S
Sbjct: 284 LKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 434 YV-LLSNIYAAVGKWDGANKVRRAMK 458
+L ++YA G A V +M+
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSME 369
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 247/464 (53%), Gaps = 37/464 (7%)
Query: 46 LRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP 105
N + + +V + + I+ + + ++ +AA F RM+E V +++T++ L+ C
Sbjct: 111 FEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCT--- 167
Query: 106 SPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWN 165
P + G ++H K GLD ++V V + I MY
Sbjct: 168 VPEYLWLGRSLHGQCVKGGLD-SEVAVLNSFITMY------------------------- 201
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP 225
M+ G +E +LFDE PV+ I+W A+I G+ + LE + +M+ SGV P
Sbjct: 202 ------MKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 226 DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
D T+ V +LV + NV VSN+ I MYARCG + AR V
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLV-ESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
FD M +++VSW ++I + +G+ + L F+ M K G PDG + L+ACSH+GL
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 346 DEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLA 405
D+GL +F MKR ++ P EHY CLVDL RAGRL+EA++ I++MP++P+ V G+LL
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
Query: 406 ACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKK 465
AC+ + +AE ++E +P YVL+SNIY+ +G ++R M++R RKK
Sbjct: 435 ACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKK 494
Query: 466 PGFSSIEIDSSIYKFVAGDKSHEENGSIYASL-ELLSFELQLCG 508
PG+S +E ++ F+AGD+SHE+ ++ L EL + ++L G
Sbjct: 495 PGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG 538
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 4/202 (1%)
Query: 195 WTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVM 254
W + + +++ +R M SG +PD + +H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV- 79
Query: 255 TQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS--WNSIIVGFAANGLADE 312
T+ + V +LI MY +CG + AR+VF+ + +S +N++I G+ AN +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
A F M++ G D V+ G + C+ + G + + + + + +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNSFI 198
Query: 373 DLYSRAGRLEEALDVIKNMPMK 394
+Y + G +E + MP+K
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVK 220
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 254/474 (53%), Gaps = 16/474 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V WTS ++ H + G+ + F MR + + L S CA ++S V
Sbjct: 260 VTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAEL---EALSIAEKV 316
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H Y K G + + ALI +Y K G V A +F Q+ + + SWN+++ ++ +G+
Sbjct: 317 HGYVIKGGFE-EYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGK 375
Query: 177 IEDALQLFDEFP--------VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
+++AL LF E N ++WT++I G + +LE FR+MQ S V + V
Sbjct: 376 LDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSV 435
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T+ +H V+ + S+ +N+ V N+L++MYA+CG + VF+
Sbjct: 436 TICCILSICAELPALNLGREIHGHVI-RTSMSENILVQNALVNMYAKCGLLSEGSLVFEA 494
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
+ + ++SWNSII G+ +G A++ALS F+ M GF PDG++ L+ACSHAGL+++G
Sbjct: 495 IRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKG 554
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACR 408
IF M + + P+ EHY C+VDL R G L+EA +++KNMPM+P VLG+LL +CR
Sbjct: 555 REIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCR 614
Query: 409 TKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGF 468
+ +AE + L L+P +Y+LLSNIY+A G+W+ + VR K + ++K G
Sbjct: 615 MHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGS 674
Query: 469 SSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFSDKETYEDD 522
S IE+ YKF +G E +IY LE L + G P D YEDD
Sbjct: 675 SWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG--PT-HDGNNYEDD 725
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 144/316 (45%), Gaps = 15/316 (4%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W S + + G A + MR+ + + L +L C + H
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYL---GRFGLCRAFHT 182
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
++GL N + V L+ +Y K+G + A +F +M +RN +SWN M+ G+ + + E
Sbjct: 183 QVIQIGLKEN-LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
Query: 179 DALQLF-----DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
A+++F +EF + ++WT+++ + + L+ F M++SG A +
Sbjct: 242 SAVKIFEWMQREEFK-PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVF 300
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
VH V+ + ++ + N+LI +Y + G ++ A +F + ++
Sbjct: 301 FSVCAELEALSIAEKVHGYVI-KGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKE----GFEPDGVSYTGALTACSHAGLIDEGL 349
+ SWNS+I F G DEALS F+ +++ + + V++T + C+ G D+ L
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 350 RIFNKMKRVRRIAPRI 365
F +M+ + +A +
Sbjct: 420 EYFRQMQFSKVLANSV 435
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 140/342 (40%), Gaps = 59/342 (17%)
Query: 167 MLDGYMRSGEIEDALQLFDEFPV---RNAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
++ Y R G + DA +F+ + + W +++ V ++ ALE +R M+ G+
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
D + H V+ Q LK+N+ V N L+ +Y + G + A
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVI-QIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 284 QVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
+F M R +SWN +I GF+ + A+ F MQ+E F+PD V++T L+ S G
Sbjct: 214 NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEV---VL 400
++ L+ F+ M+ M N V L
Sbjct: 274 KFEDVLKYFHLMR------------------------------------MSGNAVSGEAL 297
Query: 401 GSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV----LLSNIYAAVGKWDGANKVRRA 456
+ C + +AEKV Y+++ GG Y+ L ++Y GK A + R
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIK---GGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ 354
Query: 457 MKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLE 498
++++GI +S I FV K +E S+++ LE
Sbjct: 355 IRNKGIES--------WNSLITSFVDAGKL-DEALSLFSELE 387
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG---MLHRTMVSWNSIIVGFA 305
VH V+ D + + ++ +LI +YAR G + AR VF+ +L + WNSI+
Sbjct: 75 VHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANV 134
Query: 306 ANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGL-RIFNKMKRVRRIAPR 364
++GL + AL + M++ G DG L AC + G GL R F+ +
Sbjct: 135 SHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRF--GLCRAFHTQVIQIGLKEN 192
Query: 365 IEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
+ L+ LY +AGR+ +A ++ MP++
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVR 222
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 236/458 (51%), Gaps = 37/458 (8%)
Query: 55 PTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
V++TS IA + R G EA F M E + P+ T+ +L+ CA Y G
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE---GK 417
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
VH + ++ L D+ V AL+DMYAK
Sbjct: 418 RVHEWIKENDLGF-DIFVSNALMDMYAKC------------------------------- 445
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXX 233
G +++A +F E V++ ISW +IGG+ K + +AL F + + +PD TV
Sbjct: 446 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+H +M D V+NSL+DMYA+CG + +A +FD + +
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+VSW +I G+ +G EA++ FN M++ G E D +S+ L ACSH+GL+DEG R FN
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
M+ +I P +EHY C+VD+ +R G L +A I+NMP+ P+ + G+LL CR ++
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684
Query: 414 GLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEI 473
LAEKV + + EL+P YVL++NIYA KW+ ++R+ + RG+RK PG S IEI
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
Query: 474 DSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP 511
+ FVAGD S+ E +I A L + + GY P
Sbjct: 745 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 154/341 (45%), Gaps = 37/341 (10%)
Query: 54 DPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
+ + W + +SG + F +M + VE ++ T + + S SV G
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV---SKSFSSLRSVHGG 214
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
+H + K G + VG +L+ Y K+ VDS
Sbjct: 215 EQLHGFILKSGFGERN-SVGNSLVAFYLKNQRVDS------------------------- 248
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
A ++FDE R+ ISW ++I G+V ++ L F +M +SG+ D T+
Sbjct: 249 ------ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
VH + + +++ R N+L+DMY++CG ++ A+ VF M R+
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSRED-RFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+VS+ S+I G+A GLA EA+ F M++EG PD + T L C+ L+DEG R+
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
+K + I L+D+Y++ G ++EA V M +K
Sbjct: 422 WIKE-NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
Y G++++A ++FDE + A+ W L+ K ++ F++M SGV D T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H ++ + + V NSL+ Y + ++ AR+VFD M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFIL-KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
R ++SWNSII G+ +NGLA++ LS F M G E D + C+ + LI G
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 351 IFNKMKRVRRIAPRIEHY-GCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRT 409
+ + V+ R + + L+D+YS+ G L+ A V + M + + V S++A
Sbjct: 318 VHS--IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR-SVVSYTSMIAGYAR 374
Query: 410 KGEIGLAEKVMKYLVE 425
+G G A K+ + + E
Sbjct: 375 EGLAGEAVKLFEEMEE 390
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 240/463 (51%), Gaps = 46/463 (9%)
Query: 56 TVAWTSSIAHHCRSGQL-VEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
++WT+ I + ++ L EA + F M + VEPN+ T + C + P G
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR---VG 392
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
V A K GL N V ++I M+ KS ++ A+ F+ + +NLVS+NT LDG R
Sbjct: 393 KQVLGQAFKRGLASNS-SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 174 SGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
+ E A +L E R +A ++ +L+ G ++ +
Sbjct: 452 NLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ---------------- 495
Query: 230 VXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM 289
+H V+ + L N V N+LI MY++CG I+ A +VF+ M
Sbjct: 496 -------------------IHSQVV-KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 290 LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGL 349
+R ++SW S+I GFA +G A L FN M +EG +P+ V+Y L+ACSH GL+ EG
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 350 RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRT 409
R FN M +I P++EHY C+VDL RAG L +A + I MP + + +V + L ACR
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRV 655
Query: 410 KGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
L + + ++ELDP + Y+ LSNIYA GKW+ + ++RR MK+R + K+ G S
Sbjct: 656 HSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCS 715
Query: 470 SIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
IE+ I+KF GD +H IY L+ L E++ CGYVPD
Sbjct: 716 WIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPD 758
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 186/447 (41%), Gaps = 77/447 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W++ +A + +G+ ++A FV E + PN+ ++ C++ V G
Sbjct: 131 VVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN---SDFVGVGRV 187
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGN-VDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+ K G +DV VG +LIDM+ K N ++A VFD+M N+V+W M+ M+
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G FP ++A+ F +M LSG D T+
Sbjct: 248 G-----------FP--------------------REAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC---GCIEIARQVFDGMLH 291
+H + + D V SL+DMYA+C G ++ R+VFD M
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 292 RTMVSWNSIIVGFAAN-GLADEALSFFNSMQKEG-FEPDGVSYTGALTAC---------- 339
+++SW ++I G+ N LA EA++ F+ M +G EP+ +++ A AC
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 340 ------------SHAGLIDEGLRIFNKMKRVRRIAPRIE--------HYGCLVDLYSRAG 379
S++ + + + +F K R+ E Y +D R
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 380 RLEEALDVIKNMPMKP---NEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV- 435
E+A ++ + + + SLL+ G I E++ +V+L +
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 436 LLSNIYAAVGKWDGANKVRRAMKDRGI 462
L ++Y+ G D A++V M++R +
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNV 540
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 165/401 (41%), Gaps = 86/401 (21%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V WT I + G EA F+ M + E + TL ++ S CA ++S G
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL---ENLSLGKQ 290
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKS---GNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
+H++A + GL ++DV+ +L+DMYAK G+VD R VFD+M +++SW ++ GYM
Sbjct: 291 LHSWAIRSGL-VDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-VAPDYVTVX 231
++ + +A+ F EM G V P++ T
Sbjct: 348 KNCNLA------------------------------TEAINLFSEMITQGHVEPNHFTFS 377
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQ---DSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
V + V+ Q L N V+NS+I M+ + +E A++ F+
Sbjct: 378 SAFKACGNLSDPR----VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFES 433
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
+ + +VS+N+ + G N ++A + + + ++ L+ ++ G I +G
Sbjct: 434 LSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Query: 349 LRIFNKMKRVRRIAPRIEHYGC--LVDLYSRAGRLEEALDVIKNMP-------------- 392
+I ++ V ++ C L+ +YS+ G ++ A V M
Sbjct: 494 EQIHSQ---VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGF 550
Query: 393 --------------------MKPNEVVLGSLLAACRTKGEI 413
+KPNEV ++L+AC G +
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 180/435 (41%), Gaps = 56/435 (12%)
Query: 63 IAHHCRSGQLVEAASTFVRMREAEVEP-NNITLITLLSGCAHYPSPSSVSFGATVHAYAR 121
I H +G L A S M + P +++T +LL C G VHA R
Sbjct: 33 ILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIR---ARDFRLGKLVHA--R 87
Query: 122 KLGLDMN-DVKVGTALIDMYAKSGNVDSARLVFDQM---GLRNLVSWNTMLDGYMRSGEI 177
+ D+ D + +LI +Y+KSG+ A VF+ M G R++VSW+ M+ Y +G
Sbjct: 88 LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
DA+++F EF L G V D+ C+ + + D+V V
Sbjct: 148 LDAIKVFVEF----------LELGLVPNDY------CYTAVIRACSNSDFVGVGRVTLG- 190
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC-GCIEIARQVFDGMLHRTMVS 296
+M + +V V SLIDM+ + E A +VFD M +V+
Sbjct: 191 --------------FLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W +I G EA+ FF M GFE D + + +AC+ E L + ++
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL----ENLSLGKQLH 292
Query: 357 RVRRIAPRIEHYGC-LVDLYSRA---GRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+ ++ C LVD+Y++ G +++ V M+ + V+ + L K
Sbjct: 293 SWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDR--MEDHSVMSWTALITGYMKN- 349
Query: 413 IGLAEKVMKYLVELDPGG--DSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
LA + + E+ G + N+ S+ + A G +V + + + ++ +S
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP-RVGKQVLGQAFKRGLASNS 408
Query: 471 IEIDSSIYKFVAGDK 485
+S I FV D+
Sbjct: 409 SVANSVISMFVKSDR 423
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 242/454 (53%), Gaps = 49/454 (10%)
Query: 74 EAASTFVRMRE-AEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKV 132
EA + +M E E P+ T +L CA+ S G VH K G DV V
Sbjct: 133 EAFMLYRKMLERGESSPDKHTFPFVLKACAYI---FGFSEGKQVHCQIVKHGFG-GDVYV 188
Query: 133 GTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNA 192
LI +Y G +D AR ++FDE P R+
Sbjct: 189 NNGLIHLYGSCGCLDLAR-------------------------------KVFDEMPERSL 217
Query: 193 ISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRL 252
+SW ++I V+ + AL+ FREMQ S PD T+ W H
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 253 VMTQDSLKD--NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLA 310
++ + + +V V NSLI+MY +CG + +A QVF GM R + SWN++I+GFA +G A
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRA 336
Query: 311 DEALSFFNSM--QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY 368
+EA++FF+ M ++E P+ V++ G L AC+H G +++G + F+ M R I P +EHY
Sbjct: 337 EEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHY 396
Query: 369 GCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG-EIGLAEKVMKYLVELD 427
GC+VDL +RAG + EA+D++ +MPMKP+ V+ SLL AC KG + L+E++ + ++
Sbjct: 397 GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTK 456
Query: 428 PGGDSN-------YVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKF 480
+S+ YVLLS +YA+ +W+ VR+ M + GIRK+PG SSIEI+ ++F
Sbjct: 457 EDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEF 516
Query: 481 VAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
AGD SH + IY L+++ L+ GY+PD S
Sbjct: 517 FAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRS 550
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 158/383 (41%), Gaps = 63/383 (16%)
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQ-ALECFREMQLSG-VAPDYVTVXXX 233
++ A ++FD ++ W LI K+ A +R+M G +PD T
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
VH + + +V V+N LI +Y CGC+++AR+VFD M R+
Sbjct: 158 LKACAYIFGFSEGKQVH-CQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC-----------SHA 342
+VSWNS+I G D AL F MQ+ FEPDG + L+AC +HA
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 343 GL-----IDEGLRIFNKMKRVR--------RIAPRI---------EHYGCLVDLYSRAGR 380
L +D + + K + R+A ++ + ++ ++ GR
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR 335
Query: 381 LEEALDVIKNM-----PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE---LDPGGDS 432
EEA++ M ++PN V LL AC +G + + +V ++P +
Sbjct: 336 AEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALE- 394
Query: 433 NYVLLSNIYAAVGKWDGA------------NKVRRAMKDRGIRKKPGFSSIEIDSSIYKF 480
+Y + ++ A G A + R++ D +K +S+E+ I +
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG---ASVELSEEIARN 451
Query: 481 VAGDKSHEE--NGSIYASLELLS 501
+ G K E NG+ + LLS
Sbjct: 452 IIGTKEDNESSNGNCSGAYVLLS 474
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W S I R G+ A F M+ + EP+ T+ ++LS CA S+S G
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACA---GLGSLSLGTWA 273
Query: 117 HAYA-RKLGLDMN-DVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
HA+ RK +D+ DV V +LI+MY K G++ A VF M R+L SWN M+ G+
Sbjct: 274 HAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATH 333
Query: 175 GEIEDALQLFDEF-----PVR-NAISWTALI-----GGFVKK 205
G E+A+ FD VR N++++ L+ GFV K
Sbjct: 334 GRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 375
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 254/463 (54%), Gaps = 37/463 (7%)
Query: 53 TDPTVAWTSSIAH-HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
++P + +S+A + R +E S FV + E + P+N T +LL CA ++
Sbjct: 90 SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA---VAKALE 146
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
G +H + KLGLD ++V V LI+MY + +VDSAR VFD++ +V +N
Sbjct: 147 EGRQLHCLSMKLGLD-DNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYN------ 199
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
A+I G+ +++ +AL FREMQ + P+ +T+
Sbjct: 200 -------------------------AMITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
W+H+ + S V+V+ +LIDM+A+CG ++ A +F+ M +
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYA-KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY 293
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
+ +W+++IV +A +G A++++ F M+ E +PD +++ G L ACSH G ++EG +
Sbjct: 294 KDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKY 353
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
F++M I P I+HYG +VDL SRAG LE+A + I +P+ P ++ LLAAC +
Sbjct: 354 FSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Query: 412 EIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+ LAEKV + + ELD +YV+LSN+YA KW+ + +R+ MKDR K PG SSI
Sbjct: 414 NLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSI 473
Query: 472 EIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
E+++ +++F +GD ++ +L+ + EL+L GYVPD S
Sbjct: 474 EVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTS 516
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 242/457 (52%), Gaps = 37/457 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V +T+ I+ + +G +++ F + + ++ PN ITL+++L + + G
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA---LKLGRE 462
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H + K G D N +G A+IDMYAK G +M L
Sbjct: 463 LHGFIIKKGFD-NRCNIGCAVIDMYAKCG----------RMNL----------------- 494
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
A ++F+ R+ +SW ++I + D+ A++ FR+M +SG+ D V++
Sbjct: 495 ----AYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 550
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H M + SL +V ++LIDMYA+CG ++ A VF M + +V
Sbjct: 551 ACANLPSESFGKAIHGF-MIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV 609
Query: 296 SWNSIIVGFAANGLADEALSFFNSM-QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
SWNSII +G ++L F+ M +K G PD +++ +++C H G +DEG+R F
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRS 669
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M I P+ EHY C+VDL+ RAGRL EA + +K+MP P+ V G+LL ACR +
Sbjct: 670 MTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVE 729
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
LAE L++LDP YVL+SN +A +W+ KVR MK+R ++K PG+S IEI+
Sbjct: 730 LAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Query: 475 SSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP 511
+ FV+GD +H E+ IY+ L L EL+L GY+P
Sbjct: 790 KRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 186/413 (45%), Gaps = 41/413 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
TV W I+ + +SG + E+ + F M + V P+ IT +LL + + ++ +
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF---ENLEYCKQ 361
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H Y + + + D+ + +ALID Y K V A+ +F Q N++
Sbjct: 362 IHCYIMRHSISL-DIFLTSALIDAYFKCRGVSMAQNIFSQC--------NSV-------- 404
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ + +TA+I G++ + +LE FR + ++P+ +T+
Sbjct: 405 ---------------DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILP 449
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H ++ + + + ++IDMYA+CG + +A ++F+ + R +V
Sbjct: 450 VIGILLALKLGRELHGFII-KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 508
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWNS+I A + A+ F M G D VS + AL+AC++ G I M
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 568
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
+ +A + L+D+Y++ G L+ A++V K M K N V S++AAC G++
Sbjct: 569 IK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLKD 626
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAA--VGKWDGANKVRRAM-KDRGIRKK 465
+ + +VE L I + VG D + R+M +D GI+ +
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQ 679
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 148/352 (42%), Gaps = 40/352 (11%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V W + + + G L F MR ++ PN +T +LS CA S + G +
Sbjct: 205 VIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA---SKLLIDLGVQL 261
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H G+D G++ N++L Y + G
Sbjct: 262 HGLVVVSGVDFE---------------GSIK-----------------NSLLSMYSKCGR 289
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+DA +LF + ++W +I G+V+ +++L F EM SGV PD +T
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H +M + S+ ++ ++++LID Y +C + +A+ +F +V
Sbjct: 350 VSKFENLEYCKQIHCYIM-RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVV 408
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
+ ++I G+ NGL ++L F + K P+ ++ L + G + +
Sbjct: 409 FTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI- 467
Query: 357 RVRRIAPRIEHYGC-LVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
+++ + GC ++D+Y++ GR+ A ++ + + K + V S++ C
Sbjct: 468 -IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 36/282 (12%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W S I+ R+G L +A + + +M V P+ T L+ C + + F +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDT-- 163
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
LG+D N+ V ++LI Y + G +D
Sbjct: 164 -VSSLGMDCNEF-VASSLIKAYLEYGKIDVPS---------------------------- 193
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
+LFD ++ + W ++ G+ K ++ F M++ ++P+ VT
Sbjct: 194 ---KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
+H LV+ + + NSL+ MY++CG + A ++F M V+WN
Sbjct: 251 SKLLIDLGVQLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWN 309
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
+I G+ +GL +E+L+FF M G PD ++++ L + S
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 13/287 (4%)
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAI--SWTALIGGFVKKDHHKQALECFREMQLSGVA 224
+L Y G D ++F +R + W ++I FV+ QAL + +M GV+
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
PD T ++ V + + N V++SLI Y G I++ +
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTV-SSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
+FD +L + V WN ++ G+A G D + F+ M+ + P+ V++ L+ C+ L
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
ID G+++ + + V + L+ +YS+ GR ++A + + M + + V
Sbjct: 255 IDLGVQL-HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWN--- 309
Query: 405 AACRTKGEI--GLAEKVMKYLVELDPGGD-SNYVLLSNIYAAVGKWD 448
C G + GL E+ + + E+ G + + S++ +V K++
Sbjct: 310 --CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 231/435 (53%), Gaps = 8/435 (1%)
Query: 40 TNQSFSLRHNTKHTDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLL 98
+N ++ R + +P V + + I + G +E+ S F M+ + + T LL
Sbjct: 50 SNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLL 109
Query: 99 SGCAHYPSPSSVSFGATVHAYARKLGLD-MNDVKVGTALIDMYAKSGNVDSARLVFDQMG 157
C+ S S + FG VH + G + +++G ++++Y G + A+ VFD+M
Sbjct: 110 KSCS---SLSDLRFGKCVHGELIRTGFHRLGKIRIG--VVELYTSGGRMGDAQKVFDEMS 164
Query: 158 LRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFRE 217
RN+V WN M+ G+ SG++E L LF + R+ +SW ++I K ++ALE F E
Sbjct: 165 ERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 218 MQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG 277
M G PD TV W+H + KD + V N+L+D Y + G
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 278 CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGAL 336
+E A +F M R +VSWN++I G A NG + + F++M +EG P+ ++ G L
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 337 TACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPN 396
CS+ G ++ G +F M ++ R EHYG +VDL SR+GR+ EA +KNMP+ N
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNAN 404
Query: 397 EVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRA 456
+ GSLL+ACR+ G++ LAE LV+++PG NYVLLSN+YA G+W KVR
Sbjct: 405 AAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTL 464
Query: 457 MKDRGIRKKPGFSSI 471
MK +RK G S+I
Sbjct: 465 MKKNRLRKSTGQSTI 479
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 261/497 (52%), Gaps = 44/497 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V W S ++ + G +A + RM+ A ++P+ ++ +LL A P + G +
Sbjct: 191 VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE---PGHLKLGKAI 247
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDG------ 170
H Y + L DV V T LIDMY K+G + AR+VFD M +N+V+WN+++ G
Sbjct: 248 HGYILRNQL-WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 171 -----------------------------YMRSGEIEDALQLFDEFPVR----NAISWTA 197
Y G+ E AL + + + N +SWTA
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 198 LIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQD 257
+ G K + + AL+ F +MQ GV P+ T+ VH + ++
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 258 SLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFF 317
+ D V+ +L+DMY + G ++ A ++F G+ ++++ SWN +++G+A G +E ++ F
Sbjct: 427 LICD-AYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 318 NSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSR 377
+ M + G EPD +++T L+ C ++GL+ EG + F+ M+ I P IEH C+VDL R
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 378 AGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLL 437
+G L+EA D I+ M +KP+ + G+ L++C+ ++ LAE K L L+P +NY+++
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605
Query: 438 SNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASL 497
N+Y+ + +W+ ++R M++ +R + +S I+ID +++ F A K+H + G IY L
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Query: 498 ELLSFELQLCGYVPDFS 514
L E++ GYVPD S
Sbjct: 666 YKLVSEMKKSGYVPDTS 682
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 180/355 (50%), Gaps = 13/355 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
+AW + + RSG +A F M+ + + + T++ LL C++ + G +
Sbjct: 55 LAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN---KEGFAEGRQI 111
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H Y +LGL+ N V + +LI MY+++G ++ +R VF+ M RNL SWN++L Y + G
Sbjct: 112 HGYVLRLGLESN-VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGY 170
Query: 177 IEDALQLFDEFPV----RNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
++DA+ L DE + + ++W +L+ G+ K K A+ + MQ++G+ P ++
Sbjct: 171 VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+H ++ ++ L +V V +LIDMY + G + AR VFD M +
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYIL-RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK 289
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+V+WNS++ G + L +A + M+KEG +PD +++ + + G ++ L +
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLL 404
KMK + +AP + + + S+ G AL V M + PN + +LL
Sbjct: 350 GKMKE-KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 165/389 (42%), Gaps = 74/389 (19%)
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
G T+H K GLD +D +V +A + Y + + +G N
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVS----------LGFAN----------- 43
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
+LFDE P R+ ++W ++ ++ + ++A+E FREMQ SG T+
Sbjct: 44 ----------KLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
+H V+ + L+ NV + NSLI MY+R G +E++R+VF+ M
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVL-RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
R + SWNSI+ + G D+A+ + M+ G +PD V++ L+ + GL + + +
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 352 FNKMKRV---------------------RRIAPRIEHY-------------GCLVDLYSR 377
+M+ ++ I Y L+D+Y +
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 378 AGRLEEALDVIKNMPMKPNEVVLGSLLA----ACRTKGEIGLAEKVMKYLVELDPGGDSN 433
G L A V M K N V SL++ AC K L ++ K ++ D
Sbjct: 273 TGYLPYARMVFDMMDAK-NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA---IT 328
Query: 434 YVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
+ L++ YA +GK + A V MK++G+
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGV 357
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 258/472 (54%), Gaps = 10/472 (2%)
Query: 32 TFSPYNPNTNQSFSLRHNTKHTDP-TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPN 90
+FS + + + ++ + +K +DP W I S ++ S +++M + P+
Sbjct: 48 SFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPD 107
Query: 91 NITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSAR 150
++T L+ + S+ G ++H K GL+ D+ + LI MY + SAR
Sbjct: 108 HMTYPFLMKSSSRL---SNRKLGGSLHCSVVKSGLEW-DLFICNTLIHMYGSFRDQASAR 163
Query: 151 LVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQ 210
+FD+M +NLV+WN++LD Y +SG++ A +FDE R+ ++W+++I G+VK+ + +
Sbjct: 164 KLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNK 223
Query: 211 ALECFREMQLSGVA-PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSL 269
ALE F +M G + + VT+ VHR ++ L V + SL
Sbjct: 224 ALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVILQTSL 282
Query: 270 IDMYARCGCIEIARQVF--DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEP 327
IDMYA+CG I A VF + + WN+II G A++G E+L F+ M++ +P
Sbjct: 283 IDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDP 342
Query: 328 DGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDV 387
D +++ L ACSH GL+ E F +K P+ EHY C+VD+ SRAG +++A D
Sbjct: 343 DEITFLCLLAACSHGGLVKEAWHFFKSLKE-SGAEPKSEHYACMVDVLSRAGLVKDAHDF 401
Query: 388 IKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKW 447
I MP+KP +LG+LL C G + LAE V K L+EL P D YV L+N+YA ++
Sbjct: 402 ISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQF 461
Query: 448 DGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLEL 499
A +R AM+ +G++K G S +++D + ++F+A DK+H + IYA L+L
Sbjct: 462 RAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQL 513
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 247/463 (53%), Gaps = 15/463 (3%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMRE-AEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
V+W S I+ + +SG + + M ++ +PN +T+I++ C S + FG
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ---SSDLIFGL 254
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
VH + + M D+ + A+I YAK G++D AR +FD+M ++ V++ ++ GYM
Sbjct: 255 EVHKKMIENHIQM-DLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAH 313
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G +++A+ LF E +W A+I G ++ +HH++ + FREM G P+ VT+
Sbjct: 314 GLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLL 373
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H + ++ +N+ V+ S+ID YA+ G + A++VFD R++
Sbjct: 374 PSLTYSSNLKGGKEIHAFAI-RNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSL 432
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
++W +II +A +G +D A S F+ MQ G +PD V+ T L+A +H+G D IF+
Sbjct: 433 IAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDS 492
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M I P +EHY C+V + SRAG+L +A++ I MP+ P V G+LL G++
Sbjct: 493 MLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLE 552
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
+A L E++P NY +++N+Y G+W+ A VR MK G++K PG S IE +
Sbjct: 553 IARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETE 612
Query: 475 SSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFSDKE 517
+ F+A D S E + +Y +E G V SDKE
Sbjct: 613 KGLRSFIAKDSSCERSKEMYEIIE---------GLVESMSDKE 646
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 162/380 (42%), Gaps = 80/380 (21%)
Query: 89 PNNITL---ITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGN 145
P++I++ + LSGC + S VH + + G D +DV VG +I Y K N
Sbjct: 127 PDSISISCVLKALSGCDDFWLGS---LARQVHGFVIRGGFD-SDVFVGNGMITYYTKCDN 182
Query: 146 VDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKK 205
++SAR VFD+M R++VSWN+M+ GY +SG ED K
Sbjct: 183 IESARKVFDEMSERDVVSWNSMISGYSQSGSFEDC------------------------K 218
Query: 206 DHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRV 265
+K L C S P+ VTV VH+ M ++ ++ ++ +
Sbjct: 219 KMYKAMLAC------SDFKPNGVTVISVFQACGQSSDLIFGLEVHK-KMIENHIQMDLSL 271
Query: 266 SNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGF 325
N++I YA+CG ++ AR +FD M + V++ +II G+ A+GL EA++ F+ M+ G
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 326 EPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL 385
+G + H +I N + + R R
Sbjct: 332 STWNAMISGLMQNNHHEEVI-------NSFREMIRCGSR--------------------- 363
Query: 386 DVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNI---YA 442
PN V L SLL + + +++ + + G D+N + ++I YA
Sbjct: 364 ---------PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIR--NGADNNIYVTTSIIDNYA 412
Query: 443 AVGKWDGANKVRRAMKDRGI 462
+G GA +V KDR +
Sbjct: 413 KLGFLLGAQRVFDNCKDRSL 432
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 130/296 (43%), Gaps = 17/296 (5%)
Query: 149 ARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHH 208
AR+V + N ++ + ++ Y R AL +FDE VRNA S+ AL+ + ++ +
Sbjct: 46 ARIVVFSIKPDNFLA-SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMY 104
Query: 209 KQALECFREMQLS------GVAPDYVTVXXXXXXXXXXX---XXXXXXWVHRLVMTQDSL 259
A F S PD +++ VH V+ +
Sbjct: 105 FDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI-RGGF 163
Query: 260 KDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNS 319
+V V N +I Y +C IE AR+VFD M R +VSWNS+I G++ +G ++ + +
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 320 MQK-EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
M F+P+GV+ AC + + GL + KM I + ++ Y++
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE-NHIQMDLSLCNAVIGFYAKC 282
Query: 379 GRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNY 434
G L+ A + M K + V G++++ GL ++ M E++ G S +
Sbjct: 283 GSLDYARALFDEMSEK-DSVTYGAIISGYMAH---GLVKEAMALFSEMESIGLSTW 334
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 255/471 (54%), Gaps = 44/471 (9%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+WT+ ++ + ++G+ +EA F +MR+ +V+P+ + L+++L+ + + G ++
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA---FTCLQDLKQGRSI 244
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA K+GL++ D+ L+S NTM Y + G+
Sbjct: 245 HASVVKMGLEIEP--------DL---------------------LISLNTM---YAKCGQ 272
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+ A LFD+ N I W A+I G+ K + ++A++ F EM V PD +++
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
++ V D +D+V +S++LIDM+A+CG +E AR VFD L R +V
Sbjct: 333 CAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W+++IVG+ +G A EA+S + +M++ G P+ V++ G L AC+H+G++ EG FN+M
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA 451
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+I P+ +HY C++DL RAG L++A +VIK MP++P V G+LL+AC+ + L
Sbjct: 452 D-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG 510
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
E + L +DP +YV LSN+YAA WD +VR MK++G+ K G S +E+
Sbjct: 511 EYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGR 570
Query: 477 IYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP-------DFSDKETYE 520
+ F GDKSH I +E + L+ G+V D +D+E E
Sbjct: 571 LEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEE 621
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 164/390 (42%), Gaps = 71/390 (18%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W + I + R+ +A + M+ A V P++ T LL C+ S + G VHA
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS---GLSHLQMGRFVHA 143
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL--RNLVSWNTMLDGYMRSGE 176
+LG D DV V LI +YAK + SAR VF+ + L R +VSW ++ Y ++GE
Sbjct: 144 QVFRLGFDA-DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
P+ +ALE F +M+ V PD+V +
Sbjct: 203 -----------PM--------------------EALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H V+ L+ + SL MYA+CG + A+ +FD M ++
Sbjct: 232 FTCLQDLKQGRSIHASVVKM-GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLIL 290
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WN++I G+A NG A EA+ F+ M + PD +S T A++AC+ G +++ ++ +
Sbjct: 291 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350
Query: 357 RV------------------------------RRIAPRIEHYGCLVDLYSRAGRLEEALD 386
R R + + + ++ Y GR EA+
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410
Query: 387 VIKNMP---MKPNEVVLGSLLAACRTKGEI 413
+ + M + PN+V LL AC G +
Sbjct: 411 LYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 150/335 (44%), Gaps = 59/335 (17%)
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G+I A Q+FD+ P W A+I G+ + +H + AL + MQL+ V+PD T
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG--MLHR 292
+VH V + +V V N LI +YA+C + AR VF+G + R
Sbjct: 127 KACSGLSHLQMGRFVHAQVF-RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS-----------H 341
T+VSW +I+ +A NG EAL F+ M+K +PD V+ L A + H
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 342 AGLIDEGLRI------------------------FNKMKRVRRIAPRIEHYGCLVDLYSR 377
A ++ GL I F+KMK +P + + ++ Y++
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-----SPNLILWNAMISGYAK 300
Query: 378 AGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNY 434
G EA+D+ M ++P+ + + S ++AC G + A + +Y+ G S+Y
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV------GRSDY 354
Query: 435 ---VLLS----NIYAAVGKWDGANKVRRAMKDRGI 462
V +S +++A G +GA V DR +
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 269 LIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
LI + G I ARQVFD + + WN+II G++ N +AL +++MQ PD
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
++ L ACS + G + ++ R+ A G L+ LY++ RL A V
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNG-LIALYAKCRRLGSARTVF 177
Query: 389 KNMPMKPNEVV-LGSLLAACRTKGEIGLAEKVMKYLVELDPGGD 431
+ +P+ +V ++++A GE A ++ + ++D D
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPD 221
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/541 (31%), Positives = 271/541 (50%), Gaps = 87/541 (16%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V W + ++ C++ QL+EA M VEP+ T+ ++L C+H + G +
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL---EMLRTGKEL 324
Query: 117 HAYARKLG-LDMN----------------------------DVKVG--TALIDMYAKSGN 145
HAYA K G LD N D K+G A+I Y+++ +
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 146 VDSARLVFDQM---------------------------------------GL-RNLVSWN 165
A L+F M GL R+ N
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 444
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ------ 219
T++D Y R G+I+ A+++F + R+ ++W +I G+V +HH+ AL +MQ
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 504
Query: 220 -----LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYA 274
+ P+ +T+ +H + +++L +V V ++L+DMYA
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGSALVDMYA 563
Query: 275 RCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTG 334
+CGC++++R+VFD + + +++WN II+ + +G EA+ M +G +P+ V++
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 335 ALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
ACSH+G++DEGLRIF MK + P +HY C+VDL RAGR++EA ++ MP
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 395 PNEV-VLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKV 453
N+ SLL A R + + E + L++L+P S+YVLL+NIY++ G WD A +V
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 454 RRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDF 513
RR MK++G+RK+PG S IE ++KFVAGD SH ++ + LE L ++ GYVPD
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDT 803
Query: 514 S 514
S
Sbjct: 804 S 804
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 45/341 (13%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W S I+ C + A F M + VEP++ TL+++++ C++ P P + G V
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HAY + G ++N + T L+ MY K G + S+++
Sbjct: 225 HAYGLRKG-ELNSFIINT-LVAMYGKLGKLASSKV------------------------- 257
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
L F R+ ++W ++ + + +ALE REM L GV PD T+
Sbjct: 258 ------LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA 311
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H + SL +N V ++L+DMY C + R+VFDGM R +
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL 371
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKE-GFEPDGVSYTGALTACSHAGLIDE-----GLR 350
WN++I G++ N EAL F M++ G + + G + AC +G G
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
+ + R R + L+D+YSR G+++ A+ + M
Sbjct: 432 VKRGLDRDRFVQ------NTLMDMYSRLGKIDIAMRIFGKM 466
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 169/450 (37%), Gaps = 89/450 (19%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W + RS L EA T+V M ++P+N LL A + G +HA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADL---QDMELGKQIHA 121
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
+ K G ++ V V L+++Y K G+
Sbjct: 122 HVYKFGYGVDSVTVANTLVNLYRKC-------------------------------GDFG 150
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD---YVTVXXXXX 235
++FD RN +SW +LI + + ALE FR M V P V+V
Sbjct: 151 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 210
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH + + L N + N+L+ MY + G + ++ + R +V
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRKGEL--NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA------------- 342
+WN+++ N EAL + M EG EPD + + L ACSH
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 343 ---GLIDE--------------------GLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAG 379
G +DE G R+F+ M +I + ++ YS+
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-----FDRKIGLWNAMIAGYSQNE 383
Query: 380 RLEEALDVIKNMP----MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV 435
+EAL + M + N + ++ AC G E + ++V+ G D +
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK--RGLDRDRF 441
Query: 436 L---LSNIYAAVGKWDGANKVRRAMKDRGI 462
+ L ++Y+ +GK D A ++ M+DR +
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 268/512 (52%), Gaps = 55/512 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLS------GCAHY---PS 106
V+WT+ + + +G++ A S F +M E + LI L C Y P
Sbjct: 110 VVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD 169
Query: 107 PSSVSFGATVHAY--------ARKLGLDMND--VKVGTALIDMYAKSGNVDSARLVFDQM 156
+++ + +H AR++ +M++ V T ++ Y ++ VD AR +FD M
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Query: 157 GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGF-------------- 202
+ VSW +ML GY+++G IEDA +LF+ PV+ I+ A+I G
Sbjct: 230 PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFD 289
Query: 203 ------------VKKDHHK-----QALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXX 245
V K H + +AL+ F MQ GV P + T+
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 246 XXWVH-RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGF 304
VH +LV Q + +V V++ L+ MY +CG + ++ +FD + ++ WNSII G+
Sbjct: 350 GKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 305 AANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAP 363
A++GL +EAL F M G +P+ V++ L+ACS+AG+++EGL+I+ M+ V + P
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 364 RIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
HY C+VD+ RAGR EA+++I +M ++P+ V GSLL ACRT ++ +AE K L
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKL 527
Query: 424 VELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAG 483
+E++P Y+LLSN+YA+ G+W ++R+ MK R +RK PG S E+++ ++ F G
Sbjct: 528 IEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRG 587
Query: 484 D-KSHEENGSIYASLELLSFELQLCGYVPDFS 514
SH E SI L+ L L+ GY PD S
Sbjct: 588 GINSHPEQESILKILDELDGLLREAGYNPDCS 619
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 169/389 (43%), Gaps = 60/389 (15%)
Query: 120 ARKL--GLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
ARKL D + +++ Y + AR +FD+M RN++SWN ++ GYM++GEI
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEI 95
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
++A ++FD P RN +SWTAL+ G+V A F +M P+ V
Sbjct: 96 DEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKVSWTVMLI 149
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
M D KDN+ S+I + G ++ AR++FD M R++++W
Sbjct: 150 GFLQDGRIDDACKLYEMIPD--KDNI-ARTSMIHGLCKEGRVDEAREIFDEMSERSVITW 206
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
+++ G+ N D+A F+ M E VS+T L
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMG------------------- 243
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
Y + GR+E+A ++ + MP+KP + ++++ KGEI A
Sbjct: 244 -----------------YVQNGRIEDAEELFEVMPVKP-VIACNAMISGLGQKGEIAKAR 285
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSI 477
+V + E + D+++ + I+ G A + M+ +G+R P F ++ SI
Sbjct: 286 RVFDSMKERN---DASWQTVIKIHERNGFELEALDLFILMQKQGVR--PTFPTL---ISI 337
Query: 478 YKFVAGDKSHEENGSIYASLELLSFELQL 506
A S ++A L F++ +
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDV 366
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 186/512 (36%), Gaps = 123/512 (24%)
Query: 46 LRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCA--- 102
LR T P I H R G++ EA F + N + +
Sbjct: 7 LRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRD 66
Query: 103 ------HYPSPSSVSFGATVHAYARKLGLDM----------NDVKVGTALIDMYAKSGNV 146
P + +S+ V Y + +D +V TAL+ Y +G V
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 147 DSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQL----------------------- 183
D A +F +M +N VSW ML G+++ G I+DA +L
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 184 --------FDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
FDE R+ I+WT ++ G+ + + A + F V P+ V
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEV----- 235
Query: 236 XXXXXXXXXXXXWVHRLV--MTQDSLKDN-----------VRVSNSLIDMYARCGCIEIA 282
W L+ + ++D V N++I + G I A
Sbjct: 236 -----------SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKA 284
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
R+VFD M R SW ++I NG EAL F MQK+G P + L+ C+
Sbjct: 285 RRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASL 344
Query: 343 GLIDEGLRIFNKMKRV------------------------------RRIAPRIEHYGCLV 372
+ G ++ ++ R R + I + ++
Sbjct: 345 ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 373 DLYSRAGRLEEALDVIKNMPM----KPNEVVLGSLLAACRTKGEIGLAEKV---MKYLVE 425
Y+ G EEAL V MP+ KPNEV + L+AC G + K+ M+ +
Sbjct: 405 SGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFG 464
Query: 426 LDPGGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
+ P ++Y + ++ G+++ A ++ +M
Sbjct: 465 VKP-ITAHYACMVDMLGRAGRFNEAMEMIDSM 495
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
NVR+++ +R G I AR++FD +++ SWNS++ G+ AN + +A F+ M
Sbjct: 21 NVRITH-----LSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP 75
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL 381
+S+ G ++ G IDE ++F+ M ++ + LV Y G++
Sbjct: 76 DRNI----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS-----WTALVKGYVHNGKV 126
Query: 382 EEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIY 441
+ A + MP K N+V +L G I A K L E+ P D N S I+
Sbjct: 127 DVAESLFWKMPEK-NKVSWTVMLIGFLQDGRIDDACK----LYEMIPDKD-NIARTSMIH 180
Query: 442 AAV--GKWDGANKVRRAMKDRGI 462
G+ D A ++ M +R +
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSV 203
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 239/452 (52%), Gaps = 8/452 (1%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
AW I+ H G+L S F M E+E +P+ T +L++ C+ S+V +G VH
Sbjct: 171 AWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS--ADSSNVVYGRMVH 228
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
A K G + V+ +++ Y K G+ D A + + + VSWN+++D M+ GE
Sbjct: 229 AVMLKNGWS-SAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGET 287
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
E AL++F P +N ++WT +I G+ + +QAL F EM SGV D+
Sbjct: 288 EKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H ++ + V N+L+++YA+CG I+ A + F + ++ +VSW
Sbjct: 348 SGLALLGHGKMIHGCLI-HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSW 406
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N+++ F +GLAD+AL +++M G +PD V++ G LT CSH+GL++EG IF M +
Sbjct: 407 NTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVK 466
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKN----MPMKPNEVVLGSLLAACRTKGEI 413
RI ++H C++D++ R G L EA D+ + N +LL AC T
Sbjct: 467 DYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHT 526
Query: 414 GLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEI 473
L +V K L +P + ++VLLSN+Y + G+W VRR M +RG++K PG S IE+
Sbjct: 527 ELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEV 586
Query: 474 DSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
+ + FV GD SH + +L L E++
Sbjct: 587 GNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 175/403 (43%), Gaps = 50/403 (12%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
TVAW + + + R G EA + F ++R ++ +P++ + +LS CA S +V FG
Sbjct: 35 TVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCA---SLGNVKFGRK 91
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL--RNLVSWNTMLDGYMR 173
+ + + G + V +LIDMY K + SA VF M RN V+W ++L YM
Sbjct: 92 IQSLVIRSGF-CASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMN 150
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
+ + E AL +F E P R A +W +I G + L F+EM S PD T
Sbjct: 151 AEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSL 210
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG---------------- 277
+ VM ++ V NS++ Y + G
Sbjct: 211 MNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLT 270
Query: 278 ----------CIEI-----ARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK 322
C++I A +VF + +V+W ++I G+ NG ++AL FF M K
Sbjct: 271 QVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMK 330
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG----CLVDLYSRA 378
G + D +Y L ACS L+ G KM I + Y LV+LY++
Sbjct: 331 SGVDSDHFAYGAVLHACSGLALLGHG-----KMIHGCLIHCGFQGYAYVGNALVNLYAKC 385
Query: 379 GRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMK 421
G ++EA ++ K + V ++L A G GLA++ +K
Sbjct: 386 GDIKEADRAFGDIANK-DLVSWNTMLFA---FGVHGLADQALK 424
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 137/332 (41%), Gaps = 50/332 (15%)
Query: 161 LVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL 220
LV + + +SG I A Q+FD P + ++W ++ + + H++A+ F +++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 221 SGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG--- 277
S PD + + LV+ + ++ V+NSLIDMY +C
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVI-RSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 278 ---------C---------------------IEIARQVFDGMLHRTMVSWNSIIVGFAAN 307
C E A VF M R +WN +I G A
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 308 GLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRI----AP 363
G + LS F M + F+PD +++ + ACS D ++ +M + +
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSS 238
Query: 364 RIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
+E ++ Y++ G ++A+ ++++ + +V S++ AC +IG EK ++ +
Sbjct: 239 AVEAKNSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACM---KIGETEKALE-V 293
Query: 424 VELDPGGDSNYVLLSNIYAAVGK-WDGANKVR 454
L P + N V + + G+ DG +R
Sbjct: 294 FHLAP--EKNIVTWTTMITGYGRNGDGEQALR 323
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V WT+ I + R+G +A FV M ++ V+ ++ +L C+ + + G +
Sbjct: 303 VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS---GLALLGHGKMI 359
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H G VG AL+++YAK G++ A F + ++LVSWNTML + G
Sbjct: 360 HGCLIHCGFQ-GYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGL 418
Query: 177 IEDALQLFD 185
+ AL+L+D
Sbjct: 419 ADQALKLYD 427
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 238/457 (52%), Gaps = 41/457 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
++WT+ I+ + + +A V M V PN T ++L C + +S
Sbjct: 127 VISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC------NGMSDVRM 180
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H K GL+ +DV V +ALID++AK G
Sbjct: 181 LHCGIIKEGLE-SDVFVRSALIDVFAKLG------------------------------- 208
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
E EDAL +FDE +AI W ++IGGF + ALE F+ M+ +G + T+
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
H ++ D ++ ++N+L+DMY +CG +E A +VF+ M R ++
Sbjct: 269 ACTGLALLELGMQAHVHIVKYDQ---DLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+W+++I G A NG + EAL F M+ G +P+ ++ G L ACSHAGL+++G F M
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
K++ I P EHYGC++DL +AG+L++A+ ++ M +P+ V +LL ACR + + L
Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 445
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
AE K ++ LDP Y LLSNIYA KWD ++R M+DRGI+K+PG S IE++
Sbjct: 446 AEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNK 505
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
I+ F+ GD SH + + L L L GYVP+
Sbjct: 506 QIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE 542
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 145/334 (43%), Gaps = 51/334 (15%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N +++ Y++ + DA QLFD+ P RN ISWT +I + K H++ALE M V
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
P+ T + ++ L+ +V V ++LID++A+ G E A
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRML----HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
VFD M+ + WNSII GFA N +D AL F M++ GF + + T L AC+ L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP------------ 392
++ G++ + + + LVD+Y + G LE+AL V M
Sbjct: 276 LELGMQAH---VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 393 ----------------------MKPNEVVLGSLLAACRTKGEIGLAE------KVMKYLV 424
KPN + + +L AC GL E + MK L
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFAC---SHAGLLEDGWYYFRSMKKLY 389
Query: 425 ELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMK 458
+DP + +Y + ++ GK D A K+ M+
Sbjct: 390 GIDPVRE-HYGCMIDLLGKAGKLDDAVKLLNEME 422
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 11/178 (6%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
T + W S I ++ + A F RM+ A TL ++L C + +
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT---GLALLEL 278
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G H + K D+ + AL+DMY K G+++ A VF+QM R++++W+TM+ G
Sbjct: 279 GMQAHVHIVKYD---QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALE----CFREM-QLSGVAP 225
++G ++AL+LF+ I G + H LE FR M +L G+ P
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 232/452 (51%), Gaps = 36/452 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V WT+ I R+G EA FV M++ V N +T++++L V FG +
Sbjct: 169 VVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAG---KVEDVRFGRS 225
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH + G DV +G++L+DMY K D
Sbjct: 226 VHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD---------------------------- 257
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
DA ++FDE P RN ++WTALI G+V+ + + F EM S VAP+ T+
Sbjct: 258 ---DAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH M ++S++ N +LID+Y +CGC+E A VF+ + + +
Sbjct: 315 ACAHVGALHRGRRVH-CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 373
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+W ++I GFAA+G A +A F +M P+ V++ L+AC+H GL++EG R+F M
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
K + P+ +HY C+VDL+ R G LEEA +I+ MPM+P VV G+L +C + L
Sbjct: 434 KGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYEL 493
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
+ +++L P Y LL+N+Y+ WD +VR+ MKD+ + K PGFS IE+
Sbjct: 494 GKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKG 553
Query: 476 SIYKFVA-GDKSHEENGSIYASLELLSFELQL 506
+ +F+A DK E+ +Y +L+ + +++L
Sbjct: 554 KLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 151/330 (45%), Gaps = 39/330 (11%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N+++ GY SG + A +LFD ++ ++WTA+I GFV+ +A+ F EM+ +GVA
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
+ +TV VH L + +K +V + +SL+DMY +C C + A++
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
VFD M R +V+W ++I G+ + D+ + F M K P+ + + L+AC+H G
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---------- 394
+ G R+ M + I L+DLY + G LEEA+ V + + K
Sbjct: 322 LHRGRRVHCYMIK-NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 395 ------------------------PNEVVLGSLLAACRTKGEIGLAEKV---MKYLVELD 427
PNEV ++L+AC G + ++ MK ++
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 428 PGGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
P D +Y + +++ G + A + M
Sbjct: 441 PKAD-HYACMVDLFGRKGLLEEAKALIERM 469
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 103/267 (38%), Gaps = 38/267 (14%)
Query: 195 WTALIGGFVK--KDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRL 252
W +LIG F + + + +R M+ +GV P T + +
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHI 129
Query: 253 VMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADE 312
V + L + V NSLI Y+ G + A ++FDG + +V+W ++I GF NG A E
Sbjct: 130 V--KFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASE 187
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
A+ +F M+K G + ++ L A + G + R+ + LV
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLV 247
Query: 373 DLYSRAGRLEEALDVIKNMPMK----------------------------------PNEV 398
D+Y + ++A V MP + PNE
Sbjct: 248 DMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEK 307
Query: 399 VLGSLLAACRTKGEIGLAEKVMKYLVE 425
L S+L+AC G + +V Y+++
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIK 334
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 246/428 (57%), Gaps = 15/428 (3%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V++ S I + + G +V A F M E++ N I+ +++SG A S G
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLM-PMEMK-NLISWNSMISGYAQ------TSDGVD 238
Query: 116 VHAYARKLGLDM--NDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
+ A KL DM D+ ++ID Y K G ++ A+ +FD M R++V+W TM+DGY +
Sbjct: 239 I---ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAK 295
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL-SGVAPDYVTVXX 232
G + A LFD+ P R+ +++ +++ G+V+ +H +ALE F +M+ S + PD T+
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+H L + + ++ +LIDMY++CG I+ A VF+G+ ++
Sbjct: 356 VLPAIAQLGRLSKAIDMH-LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 414
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
++ WN++I G A +GL + A +++ +PD +++ G L ACSH+GL+ EGL F
Sbjct: 415 SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCF 474
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
M+R +I PR++HYGC+VD+ SR+G +E A ++I+ MP++PN+V+ + L AC E
Sbjct: 475 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKE 534
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
E V K+L+ S+YVLLSN+YA+ G W +VR MK+R I K PG S IE
Sbjct: 535 FETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
Query: 473 IDSSIYKF 480
+D +++F
Sbjct: 595 LDGRVHEF 602
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 162/350 (46%), Gaps = 29/350 (8%)
Query: 54 DPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
DP + W + I H +A M E V + +L +L C+ V G
Sbjct: 85 DPFL-WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRL---GFVKGG 140
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
+H + +K GL +D+ + LI +Y K G + +R +FD+M R+ VS+N+M+DGY++
Sbjct: 141 MQIHGFLKKTGL-WSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 174 SGEIEDALQLFDEFP--VRNAISWTALIGGFVK-KDHHKQALECFREMQLSGVAPDYVTV 230
G I A +LFD P ++N ISW ++I G+ + D A + F +M D ++
Sbjct: 200 CGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMP----EKDLISW 255
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+ ++ +D V ++ID YA+ G + A+ +FD M
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRD-----VVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDEGL 349
HR +V++NS++ G+ N EAL F+ M+KE PD + L A + G
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG------ 364
Query: 350 RIFNKMKRVRRIAPRIEHYG-----CLVDLYSRAGRLEEALDVIKNMPMK 394
R+ + I + + G L+D+YS+ G ++ A+ V + + K
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 414
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 9/207 (4%)
Query: 189 VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXW 248
V + W A+I +QAL M +GV+ D ++
Sbjct: 83 VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 142
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
+H + + L ++ + N LI +Y +CGC+ ++RQ+FD M R VS+NS+I G+ G
Sbjct: 143 IHGF-LKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG-LIDEGLRIFNKMKRVRRIAPRIEH 367
L A F+ M E + +S+ ++ + +D ++F M I+
Sbjct: 202 LIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS----- 254
Query: 368 YGCLVDLYSRAGRLEEALDVIKNMPMK 394
+ ++D Y + GR+E+A + MP +
Sbjct: 255 WNSMIDGYVKHGRIEDAKGLFDVMPRR 281
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 253/507 (49%), Gaps = 61/507 (12%)
Query: 63 IAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPS--------------PS 108
IA RSG + A F MR N IT +LL G + PS P
Sbjct: 68 IARCVRSGDIDGALRVFHGMRA----KNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPD 123
Query: 109 SVSFGATVHAYARKLGLD----------MNDVKVGTALIDMYAKSGNVDSARLVFDQMGL 158
+ S+ + Y R + + D +I YA+ G ++ AR +F M
Sbjct: 124 TFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMME 183
Query: 159 RNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR---------------------------- 190
+N VSWN M+ GY+ G++E A F PVR
Sbjct: 184 KNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDM 243
Query: 191 ----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
N ++W A+I G+V+ + L+ FR M G+ P+ +
Sbjct: 244 TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLG 303
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAA 306
+H++V ++ +L ++V SLI MY +CG + A ++F+ M + +V+WN++I G+A
Sbjct: 304 RQIHQIV-SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 362
Query: 307 NGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIE 366
+G AD+AL F M PD +++ L AC+HAGL++ G+ F M R ++ P+ +
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422
Query: 367 HYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
HY C+VDL RAG+LEEAL +I++MP +P+ V G+LL ACR + LAE + L++L
Sbjct: 423 HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 482
Query: 427 DPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKS 486
+ + YV L+NIYA+ +W+ +VR+ MK+ + K PG+S IEI + ++ F + D+
Sbjct: 483 NSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI 542
Query: 487 HEENGSIYASLELLSFELQLCGYVPDF 513
H E SI+ L+ L +++L GY P+
Sbjct: 543 HPELDSIHKKLKELEKKMKLAGYKPEL 569
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 161/411 (39%), Gaps = 93/411 (22%)
Query: 126 DMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDG--------------- 170
D + + +I +SG++D A VF M +N ++WN++L G
Sbjct: 57 DQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLF 116
Query: 171 -----------------YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALE 213
Y+R+ E A FD P ++A SW +I G+ ++ ++A E
Sbjct: 117 DEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARE 176
Query: 214 CFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMY 273
F M + + V+ ++ + V ++I Y
Sbjct: 177 LFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVR-----GVVAWTAMITGY 227
Query: 274 ARCGCIEIARQVFDGM-LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSY 332
+ +E+A +F M +++ +V+WN++I G+ N ++ L F +M +EG P+
Sbjct: 228 MKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGL 287
Query: 333 TGALTACSH-----------------------------------AGLIDEGLRIFNKMKR 357
+ AL CS G + + ++F MK+
Sbjct: 288 SSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKG--E 412
+A + ++ Y++ G ++AL + + M ++P+ + ++L AC G
Sbjct: 348 KDVVA-----WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVN 402
Query: 413 IGLA---EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDR 460
IG+A V Y VE P +Y + ++ GK + A K+ R+M R
Sbjct: 403 IGMAYFESMVRDYKVEPQP---DHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAAN-GLADE 312
+T+ S +D + N +I R G I+ A +VF GM + ++WNS+++G + + E
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME 111
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
A F+ + EPD SY L+ ++ F++M + ++
Sbjct: 112 AHQLFDEIP----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP-----FKDAASWNTMI 162
Query: 373 DLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMK 421
Y+R G +E+A ++ +M M+ NEV ++++ G++ A K
Sbjct: 163 TGYARRGEMEKARELFYSM-MEKNEVSWNAMISGYIECGDLEKASHFFK 210
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 245/466 (52%), Gaps = 43/466 (9%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNN------ITLITLLSGCAHYPSPSSV 110
V+WTS I + +G ++A S F + E + ++ + L++++S C+ P+
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG-- 200
Query: 111 SFGATVHAYARKLGLDMNDVKVGTALIDMYAK--SGNVDSARLVFDQMGLRNLVSWNTML 168
++H++ K G D V VG L+D YAK G V AR +FDQ+ ++ VS+N+++
Sbjct: 201 -LTESIHSFVIKRGFD-RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIM 258
Query: 169 DGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
Y +SG +A ++F +++ A +
Sbjct: 259 SVYAQSGMSNEAFEVFRRLVKNKVVTFNA------------------------------I 288
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T+ +H V+ L+D+V V S+IDMY +CG +E AR+ FD
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
M ++ + SW ++I G+ +G A +AL F +M G P+ +++ L ACSHAGL EG
Sbjct: 348 MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEG 407
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACR 408
R FN MK + P +EHYGC+VDL RAG L++A D+I+ M MKP+ ++ SLLAACR
Sbjct: 408 WRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACR 467
Query: 409 TKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGF 468
+ LAE + L ELD Y+LLS+IYA G+W +VR MK+RG+ K PGF
Sbjct: 468 IHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGF 527
Query: 469 SSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
S +E++ ++ F+ GD+ H + IY L L+ +L GYV + S
Sbjct: 528 SLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS 573
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 179/408 (43%), Gaps = 59/408 (14%)
Query: 51 KHTDPT--VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPS 108
++ D T +W S IA RSG EA F MR+ + P + + C+ S
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS---SLF 90
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTML 168
+ G H A G +D+ V +ALI MY+ G
Sbjct: 91 DIFSGKQTHQQAFVFGYQ-SDIFVSSALIVMYSTCG------------------------ 125
Query: 169 DGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL------SG 222
++EDA ++FDE P RN +SWT++I G+ + A+ F+++ +
Sbjct: 126 -------KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDA 178
Query: 223 VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC--GCIE 280
+ D + + +H V+ + V V N+L+D YA+ G +
Sbjct: 179 MFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR-GFDRGVSVGNTLLDAYAKGGEGGVA 237
Query: 281 IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEP-DGVSYTGALTAC 339
+AR++FD ++ + VS+NSI+ +A +G+++EA F + K + ++ + L A
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLE---EALDVIKNMPMKPN 396
SH+G + G I +++ R+ + + ++D+Y + GR+E +A D +KN ++
Sbjct: 298 SHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR-- 354
Query: 397 EVVLGSLLAACRTKGEIGLAEKVMK-YLVELDPGGDSNYVLLSNIYAA 443
S A G G A K ++ + +D G NY+ ++ AA
Sbjct: 355 -----SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 144/337 (42%), Gaps = 49/337 (14%)
Query: 173 RSGEIEDALQLFDEFPVR-NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
R E ++ LF+ + + + SW ++I + +AL F M+ + P +
Sbjct: 21 RHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFP 80
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
H+ + ++ VS++LI MY+ CG +E AR+VFD +
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVF-GYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK 139
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSM------QKEGFEPDGVSYTGALTACS----- 340
R +VSW S+I G+ NG A +A+S F + + D + ++ACS
Sbjct: 140 RNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAK 199
Query: 341 ------HAGLI----DEGLRIFNKM------------KRVRRIAPRI-----EHYGCLVD 373
H+ +I D G+ + N + R+I +I Y ++
Sbjct: 200 GLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMS 259
Query: 374 LYSRAGRLEEALDV----IKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPG 429
+Y+++G EA +V +KN + N + L ++L A G + + + + ++ + G
Sbjct: 260 VYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM--G 317
Query: 430 GDSNYVLLSNI---YAAVGKWDGANKVRRAMKDRGIR 463
+ + ++ ++I Y G+ + A K MK++ +R
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR 354
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 230/433 (53%), Gaps = 6/433 (1%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W + + + + G L EA + R + ++ N + LL+ C +
Sbjct: 144 VVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV---KSRQLQLNRQ 200
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
H G +++V + ++ID YAK G ++SA+ FD+M ++++ W T++ GY + G
Sbjct: 201 AHGQVLVAGF-LSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++E A +LF E P +N +SWTALI G+V++ +AL+ FR+M GV P+ T
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR-TM 294
+H M + +++ N V +SLIDMY++ G +E + +VF +
Sbjct: 320 ASASIASLRHGKEIHGY-MIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
V WN++I A +GL +AL + M K +P+ + L ACSH+GL++EGLR F
Sbjct: 379 VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFES 438
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M I P EHY CL+DL RAG +E + I+ MP +P++ + ++L CR G
Sbjct: 439 MTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEE 498
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
L +K L++LDP + Y+LLS+IYA GKW+ K+R MK R + K+ S IEI+
Sbjct: 499 LGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIE 558
Query: 475 SSIYKFVAGDKSH 487
+ F D SH
Sbjct: 559 KKVEAFTVSDGSH 571
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 172/400 (43%), Gaps = 39/400 (9%)
Query: 55 PTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
P S ++ H +L +A S + + + L +LL C S+ G
Sbjct: 10 PICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCG---DTKSLKQGK 66
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+H + + G + + LI MY K G A VFDQM LRNL SWN M+ GY++S
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKS 126
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G + A +FD P R+ +SW ++ G+ + + +AL ++E + SG+ + +
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----L 290
H V+ L NV +S S+ID YA+CG +E A++ FD M +
Sbjct: 187 TACVKSRQLQLNRQAHGQVLVAGFL-SNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 291 H---------------------------RTMVSWNSIIVGFAANGLADEALSFFNSMQKE 323
H + VSW ++I G+ G + AL F M
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 324 GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEE 383
G +P+ +++ L A + + G I M R + P L+D+YS++G LE
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEA 364
Query: 384 ALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
+ V + K + V ++++A + GL K ++ L
Sbjct: 365 SERVFRICDDKHDCVFWNTMISAL---AQHGLGHKALRML 401
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 256/491 (52%), Gaps = 62/491 (12%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAH------------ 103
V WT+ ++ + RS QL A F M E V ++ T++ G A
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFD 164
Query: 104 -YPSPSSVSFGATVHAYARKLGLD--MN--------DVKVGTALIDMYAKSGNVDSARLV 152
P + VS+ + V A ++ +D MN DV TA++D AK+G VD AR +
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRL 224
Query: 153 FDQMGLRNLVSWNTMLDGYMRSGEIEDALQLF---------------------------- 184
FD M RN++SWN M+ GY ++ I++A QLF
Sbjct: 225 FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKAC 284
Query: 185 ---DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-VAPDYVTVXXXXXXXXXX 240
D P +N ISWT +I G+V+ +++AL F +M G V P+ T
Sbjct: 285 GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDL 344
Query: 241 XXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML--HRTMVSWN 298
+H+L+ K+ + V+++L++MY++ G + AR++FD L R ++SWN
Sbjct: 345 AGLVEGQQIHQLISKSVHQKNEI-VTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRV 358
S+I +A +G EA+ +N M+K GF+P V+Y L ACSHAGL+++G+ F + R
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Query: 359 RRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEK 418
+ R EHY CLVDL RAGRL++ + I + + G++L+AC E+ +A++
Sbjct: 464 ESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKE 523
Query: 419 VMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIY 478
V+K ++E YVL+SNIYAA GK + A ++R MK++G++K+PG S +++ +
Sbjct: 524 VVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNH 583
Query: 479 KFVAGDKSHEE 489
FV GDKSH +
Sbjct: 584 LFVVGDKSHPQ 594
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 165/370 (44%), Gaps = 33/370 (8%)
Query: 55 PTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
P W I C+ G++ EA F + E +V +T +++G + G
Sbjct: 47 PQPEWL--IGELCKVGKIAEARKLFDGLPERDV----VTWTHVITG--------YIKLGD 92
Query: 115 TVHAYARKLGLD-MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
A +D +V TA++ Y +S + A ++F +M RN+VSWNTM+DGY +
Sbjct: 93 MREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQ 152
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
SG I+ AL+LFDE P RN +SW +++ V++ +A+ F M V V
Sbjct: 153 SGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGL 212
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKD-NVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
RL D + + N+ N++I YA+ I+ A Q+F M R
Sbjct: 213 AKNGKVDE-------ARRLF---DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
SWN++I GF N ++A F+ M E + +S+T +T +E L +F
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVF 318
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDV---IKNMPMKPNEVVLGSLLAACRT 409
+KM R + P + Y ++ S L E + I + NE+V +LL
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSK 378
Query: 410 KGEIGLAEKV 419
GE+ A K+
Sbjct: 379 SGELIAARKM 388
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 49/255 (19%)
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
+ G+I +A +LFD P R+ ++WT +I G++K ++A E F +
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV-------------- 103
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
DS K NV +++ Y R + IA +F M R
Sbjct: 104 ------------------------DSRK-NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER 138
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+VSWN++I G+A +G D+AL F+ M E + VS+ + A G IDE + +F
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+M R ++ + +VD ++ G+++EA + MP + N + +++
Sbjct: 195 ERMPRRDVVS-----WTAMVDGLAKNGKVDEARRLFDCMPER-NIISWNAMITGYAQNNR 248
Query: 413 IGLAEKVMKYLVELD 427
I A+++ + + E D
Sbjct: 249 IDEADQLFQVMPERD 263
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 241/464 (51%), Gaps = 36/464 (7%)
Query: 49 NTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPS 108
N + V W+ IA C++G EA F+RMREA V PN TL ++L+GCA
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA---IGK 362
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTML 168
G +H K+G D+ D+ V ALID+YAK +D+
Sbjct: 363 CSGLGEQLHGLVVKVGFDL-DIYVSNALIDVYAKCEKMDT-------------------- 401
Query: 169 DGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
A++LF E +N +SW +I G+ +A FRE + V+ V
Sbjct: 402 -----------AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T VH L + ++ K V VSNSLIDMYA+CG I+ A+ VF+
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNE 509
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
M + SWN++I G++ +GL +AL + M+ +P+G+++ G L+ CS+AGLID+G
Sbjct: 510 METIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQG 569
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACR 408
F M R I P +EHY C+V L R+G+L++A+ +I+ +P +P+ ++ ++L+A
Sbjct: 570 QECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASM 629
Query: 409 TKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGF 468
+ A + + +++++P ++ YVL+SN+YA +W +R++MK+ G++K+PG
Sbjct: 630 NQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGL 689
Query: 469 SSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
S IE ++ F G H + I LE L+ + GYVPD
Sbjct: 690 SWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPD 733
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 180/438 (41%), Gaps = 83/438 (18%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V W ++ + +G ++ MR A PNN T T L + F V
Sbjct: 213 VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASI---GLGAFDFAKGV 269
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H K + D +VG L+ +Y + G++ A VF++M ++V W+ M+ + ++G
Sbjct: 270 HGQILKTCYVL-DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 177 IEDALQLF----DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
+A+ LF + F V N + ++++ G + SG+
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG-------------KCSGLGEQ------ 369
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+H LV+ + ++ VSN+LID+YA+C ++ A ++F + +
Sbjct: 370 ----------------LHGLVV-KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
VSWN++IVG+ G +A S F + V+++ AL AC+ +D G+++
Sbjct: 413 NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVH 472
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA---------------------------- 384
+ A ++ L+D+Y++ G ++ A
Sbjct: 473 GLAIKTNN-AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLG 531
Query: 385 ------LDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGD---SNYV 435
LD++K+ KPN + +L+ C G I ++ + ++ D G + +Y
Sbjct: 532 RQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR-DHGIEPCLEHYT 590
Query: 436 LLSNIYAAVGKWDGANKV 453
+ + G+ D A K+
Sbjct: 591 CMVRLLGRSGQLDKAMKL 608
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 143/332 (43%), Gaps = 47/332 (14%)
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
+L + N +L+ Y+++G +DAL LFDE P RN +S+ L G+ +D + + +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLH 138
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G + W+H ++ + N V +LI+ Y+ CG +
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIV-KLGYDSNAFVGAALINAYSVCGSV 197
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
+ AR VF+G+L + +V W I+ + NG +++L + M+ GF P+ ++ AL A
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 340 SHAGLIDEGLRIFNK-MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP------ 392
G D + + +K + PR+ G L+ LY++ G + +A V MP
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRV-GVG-LLQLYTQLGDMSDAFKVFNEMPKNDVVP 315
Query: 393 ----------------------------MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLV 424
+ PNE L S+L C GL E++ +V
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 425 ELDPGGDSNYVL---LSNIYAAVGKWDGANKV 453
++ G D + + L ++YA K D A K+
Sbjct: 376 KV--GFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 127/303 (41%), Gaps = 39/303 (12%)
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H+ KLG D N VG ALI+ Y+ G+VDSAR V
Sbjct: 168 LHSPIVKLGYDSNAF-VGAALINAYSVCGSVDSARTV----------------------- 203
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
F+ ++ + W ++ +V+ + + +L+ M+++G P+ T
Sbjct: 204 --------FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALK 255
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH ++ + D RV L+ +Y + G + A +VF+ M +V
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCYVLDP-RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
W+ +I F NG +EA+ F M++ P+ + + L C+ G ++
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHG-- 372
Query: 356 KRVRRIAPRIEHY--GCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
V ++ ++ Y L+D+Y++ +++ A+ + + K NEV +++ GE
Sbjct: 373 -LVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVGYENLGEG 430
Query: 414 GLA 416
G A
Sbjct: 431 GKA 433
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 229/429 (53%), Gaps = 39/429 (9%)
Query: 80 VRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDM 139
V+ E ++ P+ +T L+ C S G +H + K G+ ++D V T ++ +
Sbjct: 105 VKEEEEDIAPSYLTFHFLIVACL---KACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRI 161
Query: 140 YAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALI 199
Y + D++ L DA ++FDE P + + W L+
Sbjct: 162 YVE-----------DKLLL--------------------DARKVFDEIPQPDVVKWDVLM 190
Query: 200 GGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSL 259
G+V+ + LE FREM + G+ PD +V W+H V + +
Sbjct: 191 NGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWI 250
Query: 260 KDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNS 319
+ +V V +L+DMYA+CGCIE A +VF + R + SW ++I G+AA G A +A++
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLER 310
Query: 320 MQKE-GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
+++E G +PD V G L AC+H G ++EG + M+ I P+ EHY C+VDL RA
Sbjct: 311 LEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRA 370
Query: 379 GRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGG----DSNY 434
GRL++AL++I+ MPMKP V G+LL CRT + L E +K L++L+ G ++
Sbjct: 371 GRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAAL 430
Query: 435 VLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIY 494
V LSNIY +V + A+KVR ++ RG+RK PG+S +E+D ++ KFV+GD SH I+
Sbjct: 431 VQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIH 490
Query: 495 ASLELLSFE 503
+ LLS +
Sbjct: 491 TVIHLLSVD 499
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W + + R G E F M +EP+ ++ T L+ CA +++ G
Sbjct: 183 VVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQV---GALAQGKW 239
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H + +K +DV VGTAL+DMYAK G +++A VF ++ RN+ SW ++ GY G
Sbjct: 240 IHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYG 299
Query: 176 EIEDALQLFDEFPVRNAI 193
+ A+ + + I
Sbjct: 300 YAKKAMTCLERLEREDGI 317
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 232/443 (52%), Gaps = 36/443 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+WTS I + R GQ V+A TF++MR ++V PN T ++ S CA S S + +G +
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA---SLSRLVWGEQL 332
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H LGL+ + + V +++ MY+ GN+ SA +
Sbjct: 333 HCNVLSLGLN-DSLSVSNSMMKMYSTCGNLVSASV------------------------- 366
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
LF R+ ISW+ +IGG+ + ++ + F M+ SG P +
Sbjct: 367 ------LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSV 420
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
VH L + L+ N V +SLI+MY++CG I+ A +F +VS
Sbjct: 421 SGNMAVIEGGRQVHALALCF-GLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVS 479
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
++I G+A +G + EA+ F K GF PD V++ LTAC+H+G +D G FN M+
Sbjct: 480 LTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQ 539
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+ P EHYGC+VDL RAGRL +A +I M K ++VV +LL AC+ KG+I
Sbjct: 540 ETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERG 599
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
+ + ++ELDP + V L+NIY++ G + A VR+ MK +G+ K+PG+SSI+I
Sbjct: 600 RRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDC 659
Query: 477 IYKFVAGDKSHEENGSIYASLEL 499
+ FV+GD+ H ++ IY LEL
Sbjct: 660 VSAFVSGDRFHPQSEDIYNILEL 682
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAE--VEPNNITLITLLSGCAHYPSPSSVSFGA 114
V+WTS I + + EA F MR + V P+ L +L C S++++G
Sbjct: 72 VSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ---SSNIAYGE 128
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
++HAYA K L ++ V VG++L+DMY + G +D + VF +M RN V+W ++ G + +
Sbjct: 129 SLHAYAVKTSL-LSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHA 187
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G ++ L F E +S T +K A R+++ +V V
Sbjct: 188 GRYKEGLTYFSEMSRSEELSDTYTFAIALK------ACAGLRQVKYGKAIHTHVIVR--- 238
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+ V+NSL MY CG ++ +F+ M R +
Sbjct: 239 -----------------------GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
VSW S+IV + G +A+ F M+ P+ ++ +AC+
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 6/260 (2%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL--SG 222
N+ L + +G + A Q+FD+ P + +SWT++I +V ++ +AL F M++
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 223 VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIA 282
V+PD + +H + + SL +V V +SL+DMY R G I+ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAV-KTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
+VF M R V+W +II G G E L++F+ M + D ++ AL AC+
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGS 402
+ G I + VR + L +Y+ G +++ L + +NM + + V S
Sbjct: 223 RQVKYGKAIHTHVI-VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER-DVVSWTS 280
Query: 403 LLAACRTKG-EIGLAEKVMK 421
L+ A + G E+ E +K
Sbjct: 281 LIVAYKRIGQEVKAVETFIK 300
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 242/477 (50%), Gaps = 42/477 (8%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
H W + + R+ E+ + +MR+ V P+ T ++ + S
Sbjct: 70 HKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL---GDFS 126
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
G +HA+ K G + V T L+ MY K G + SA
Sbjct: 127 CGFALHAHVVKYGFGCLGI-VATELVMMYMKFGELSSAEF-------------------- 165
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
LF+ V++ ++W A + V+ + ALE F +M V D TV
Sbjct: 166 -----------LFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
++ ++ + N+ V N+ +DM+ +CG E AR +F+ M
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRA-RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQ 273
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
R +VSW+++IVG+A NG + EAL+ F +MQ EG P+ V++ G L+ACSHAGL++EG R
Sbjct: 274 RNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRY 333
Query: 352 FNKMKRV--RRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRT 409
F+ M + + + PR EHY C+VDL R+G LEEA + IK MP++P+ + G+LL AC
Sbjct: 334 FSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAV 393
Query: 410 KGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
++ L +KV LVE P S +VLLSNIYAA GKWD +KVR M+ G +K +S
Sbjct: 394 HRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYS 453
Query: 470 SIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD----FSDKETYEDD 522
S+E + I+ F GDKSH ++ +IY L+ + +++ GYVPD F D E E +
Sbjct: 454 SVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKE 510
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 121/289 (41%), Gaps = 5/289 (1%)
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+L+ + G++ A Q+FDE W L G+V+ ++L +++M+ GV PD
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPD 108
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
T +H V+ + V+ L+ MY + G + A +F
Sbjct: 109 EFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI-VATELVMMYMKFGELSSAEFLF 167
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
+ M + +V+WN+ + G + AL +FN M + + D + L+AC G ++
Sbjct: 168 ESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLE 227
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
G I+++ ++ I I +D++ + G E A + + M + N V +++
Sbjct: 228 IGEEIYDRARK-EEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR-NVVSWSTMIVG 285
Query: 407 CRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRR 455
G+ E + + + G NYV + +A N+ +R
Sbjct: 286 YAMNGDS--REALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKR 332
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 149/459 (32%), Positives = 242/459 (52%), Gaps = 36/459 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V++ + IA + +SG +A M +++P++ TL ++L + Y V G
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD---VIKGKE 263
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H Y + G+D +DV +G++L+DMYAKS
Sbjct: 264 IHGYVIRKGID-SDVYIGSSLVDMYAKSA------------------------------- 291
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
IED+ ++F R+ ISW +L+ G+V+ + +AL FR+M + V P V
Sbjct: 292 RIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIP 351
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H V+ + N+ ++++L+DMY++CG I+ AR++FD M V
Sbjct: 352 ACAHLATLHLGKQLHGYVL-RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEV 410
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SW +II+G A +G EA+S F M+++G +P+ V++ LTACSH GL+DE FN M
Sbjct: 411 SWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
+V + +EHY + DL RAG+LEEA + I M ++P V +LL++C + L
Sbjct: 471 TKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLEL 530
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
AEKV + + +D YVL+ N+YA+ G+W K+R M+ +G+RKKP S IE+ +
Sbjct: 531 AEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKN 590
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
+ FV+GD+SH I L+ + +++ GYV D S
Sbjct: 591 KTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 182/413 (44%), Gaps = 48/413 (11%)
Query: 50 TKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSS 109
T + P +AW S I +A ++FV MR + P++ ++L C
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM---MD 120
Query: 110 VSFGATVHAYARKLGLDMNDVKVGTALIDMYAK---SGNVDSARLVFDQMGLR--NLVSW 164
+ FG +VH + +LG+D D+ G AL++MYAK G+ S VFD+M R N
Sbjct: 121 LRFGESVHGFIVRLGMDC-DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
+ + + I+ ++F+ P ++ +S+ +I G+ + ++ AL REM + +
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
PD T+ +H V+ + + +V + +SL+DMYA+ IE + +
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVI-RKGIDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
VF + R +SWNS++ G+ NG +EAL F M +P V+++ + AC+H
Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDV----------------- 387
+ G ++ + R I LVD+YS+ G ++ A +
Sbjct: 359 LHLGKQLHGYVLR-GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 388 -----------------IKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
+K +KPN+V ++L AC +GL ++ Y
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC---SHVGLVDEAWGYF 467
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 235/458 (51%), Gaps = 39/458 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+WT+ I+ ++ EA F M+ V PN T +L+ SPS V
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP-VISPSEV------ 415
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA K + + VGTAL LD Y++ G+
Sbjct: 416 HAQVVKTNYERSST-VGTAL-------------------------------LDAYVKLGK 443
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+E+A ++F ++ ++W+A++ G+ + + A++ F E+ G+ P+ T
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+ L ++ VS++L+ MYA+ G IE A +VF + +VS
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WNS+I G+A +G A +AL F M+K + DGV++ G AC+HAGL++EG + F+ M
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
R +IAP EH C+VDLYSRAG+LE+A+ VI+NMP + ++LAACR + L
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
+ ++ + P + YVLLSN+YA G W KVR+ M +R ++K+PG+S IE+ +
Sbjct: 684 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 743
Query: 477 IYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
Y F+AGD+SH IY LE LS L+ GY PD S
Sbjct: 744 TYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTS 781
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 172/423 (40%), Gaps = 77/423 (18%)
Query: 81 RMREAEVEPNNITLITLLSGCAHYPSPSSVS-------FGATVHAYARKLGLDMNDVKVG 133
R +EA+ NI + + C+ + S VS FG +H K G ++DV VG
Sbjct: 73 RTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVG 131
Query: 134 TALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAI 193
T+L+D Y K N +D ++FDE RN +
Sbjct: 132 TSLVDTYMKGSN-------------------------------FKDGRKVFDEMKERNVV 160
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
+WT LI G+ + + + L F MQ G P+ T VH +V
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+ ++ L + VSNSLI++Y +CG + AR +FD +++V+WNS+I G+AANGL EA
Sbjct: 221 V-KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACS-----------------HAGLIDEGLRI----- 351
L F SM+ S+ + C+ + L D+ +R
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRL---------EEALDVIKNMPMK---PNEVV 399
++K + + GC+ ++ S + EEA+D+ M K PNE
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 400 LGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKD 459
+L A + +V+K E + L + Y +GK + A KV + D
Sbjct: 400 YSVILTALPVISPSEVHAQVVKTNYERSSTVGT---ALLDAYVKLGKVEEAAKVFSGIDD 456
Query: 460 RGI 462
+ I
Sbjct: 457 KDI 459
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 179/440 (40%), Gaps = 72/440 (16%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V WT+ I+ + R+ E + F+RM+ +PN+ T L A G V
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR---GLQV 216
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H K GLD + V +LI++Y ++ G
Sbjct: 217 HTVVVKNGLD-KTIPVSNSLINLY-------------------------------LKCGN 244
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+ A LFD+ V++ ++W ++I G+ +AL F M+L+ V +
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKD-NVRVSNSLIDMYARCGCIEIARQVFDGM-LHRTM 294
+H V+ L D N+R +L+ Y++C + A ++F + +
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIR--TALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS-------HAGLIDE 347
VSW ++I GF N +EA+ F+ M+++G P+ +Y+ LTA HA ++
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKT 422
Query: 348 G-----------LRIFNKMKRVRRIA--------PRIEHYGCLVDLYSRAGRLEEALDVI 388
L + K+ +V A I + ++ Y++ G E A+ +
Sbjct: 423 NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 389 KNMP---MKPNEVVLGSLLAAC-RTKGEIGLAEKVMKYLVE--LDPGGDSNYVLLSNIYA 442
+ +KPNE S+L C T +G ++ + ++ LD + LL+ +YA
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT-MYA 541
Query: 443 AVGKWDGANKVRRAMKDRGI 462
G + A +V + +++ +
Sbjct: 542 KKGNIESAEEVFKRQREKDL 561
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 170 GYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
G + S + +A LFD+ P R+ S+ +L+ GF + ++A F + G+ D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 230 VXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM 289
+H + L D+V V SL+D Y + + R+VFD M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFL-DDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 290 LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGL 349
R +V+W ++I G+A N + DE L+ F MQ EG +P+ ++ AL + G+ GL
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 350 RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
++ + + + I L++LY + G + +A
Sbjct: 215 QVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKA 248
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/348 (39%), Positives = 205/348 (58%), Gaps = 7/348 (2%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
T+LD Y ++G++ A +LFDE PVR+ SW ALI G V + +A+E ++ M+ G+
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
VTV + DNV VSN+ IDMY++CG ++ A Q
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 285 VFDGML-HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
VF+ +++V+WN++I GFA +G A AL F+ ++ G +PD VSY ALTAC HAG
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSL 403
L++ GL +FN M + + ++HYGC+VDL SRAGRL EA D+I +M M P+ V+ SL
Sbjct: 323 LVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL 381
Query: 404 LAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
L A ++ +AE + + E+ D ++VLLSN+YAA G+W +VR M+ + ++
Sbjct: 382 LGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVK 441
Query: 464 KKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP 511
K PG S IE +I++F DKSHE+ IY ++ + F+++ GYV
Sbjct: 442 KIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVA 489
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 23/266 (8%)
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV------ 228
G++ A+Q+F P W A+I GF H A +R M + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 229 ----TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
T+ ++R ++ DSL + +L+D Y++ G + A +
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSL-----LCTTLLDAYSKNGDLISAYK 165
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
+FD M R + SWN++I G + A EA+ + M+ EG V+ AL ACSH G
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
+ EG IF+ I +D+YS+ G +++A V + K + V +++
Sbjct: 226 VKEGENIFHGYSNDNVIVS-----NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 405 AACRTKGEIGLAEKVMKYLVELDPGG 430
GE A + ++ +L+ G
Sbjct: 281 TGFAVHGE---AHRALEIFDKLEDNG 303
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/458 (32%), Positives = 248/458 (54%), Gaps = 12/458 (2%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
T ++W + + S + + + + + +++T+++LL C + V
Sbjct: 394 TKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVK- 452
Query: 113 GATVHAYARKLGL--DMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL---RNLVSWNTM 167
VH Y+ K GL D + K+G AL+D YAK GNV+ A +F +GL R LVS+N++
Sbjct: 453 --EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIF--LGLSERRTLVSYNSL 508
Query: 168 LDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
L GY+ SG +DA LF E + +W+ ++ + + +A+ FRE+Q G+ P+
Sbjct: 509 LSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNT 568
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
VT+ H ++ + L D +R+ +L+D+YA+CG ++ A VF
Sbjct: 569 VTIMNLLPVCAQLASLHLVRQCHGYII-RGGLGD-IRLKGTLLDVYAKCGSLKHAYSVFQ 626
Query: 288 GMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE 347
R +V + +++ G+A +G EAL ++ M + +PD V T LTAC HAGLI +
Sbjct: 627 SDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQD 686
Query: 348 GLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
GL+I++ ++ V + P +E Y C VDL +R GRL++A + MP++PN + G+LL AC
Sbjct: 687 GLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRAC 746
Query: 408 RTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPG 467
T + L V +L++ + N+VL+SN+YAA KW+G ++R MK + ++K G
Sbjct: 747 TTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAG 806
Query: 468 FSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
S +E+D FV+GD SH SI+ + L +++
Sbjct: 807 CSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 120/309 (38%), Gaps = 50/309 (16%)
Query: 105 PSPSSVSF---------------GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSA 149
P PSSV+F G ++H+Y K GL+ D VG AL+ MYAK G +
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLE-KDTLVGNALVSMYAKFGFI--- 173
Query: 150 RLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHK 209
DA FD ++ +SW A+I GF + +
Sbjct: 174 ---------------------------FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMA 206
Query: 210 QALECFREMQLSGVAPDYVTVXXXX---XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVS 266
A F M P+Y T+ +H V+ + L+ +V V
Sbjct: 207 DAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVC 266
Query: 267 NSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-F 325
NSL+ Y R G IE A +F M + +VSWN +I G+A+N +A F+++ +G
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 326 EPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL 385
PD V+ L C+ + G I + + R + L+ Y+R G A
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 386 DVIKNMPMK 394
M K
Sbjct: 387 WAFSLMSTK 395
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 160/413 (38%), Gaps = 41/413 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W + IA + + +A +F M + EPN T+ +L CA + G
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H+Y + V V +L+ Y +R G
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFY-------------------------------LRVG 277
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-VAPDYVTVXXXX 234
IE+A LF ++ +SW +I G+ +A + F + G V+PD VT+
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H ++ L ++ V N+LI YAR G A F M + +
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
+SWN+I+ FA + + L+ + + E D V+ L C + I + +
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGY 457
Query: 355 MKRVRRI----APRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
+ + P++ + L+D Y++ G +E A + + + V SLL+
Sbjct: 458 SVKAGLLHDEEEPKLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNS 515
Query: 411 GEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
G A+ + E+ + + L+ IYA + A V R ++ RG+R
Sbjct: 516 GSHDDAQML---FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 6/163 (3%)
Query: 30 NPTFSPY-NPNTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVE 88
N S Y N ++ + T W+ + + S EA F ++ +
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Query: 89 PNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDS 148
PN +T++ LL CA S V H Y + GL D+++ L+D+YAK G++
Sbjct: 566 PNTVTIMNLLPVCAQLASLHLVR---QCHGYIIRGGL--GDIRLKGTLLDVYAKCGSLKH 620
Query: 149 ARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRN 191
A VF R+LV + M+ GY G ++AL ++ N
Sbjct: 621 AYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESN 663
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 224/431 (51%), Gaps = 37/431 (8%)
Query: 72 LVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVK 131
L EA F M V P+ IT T++ C P S++ G H K G
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEAC---HKPESLTLGTQFHGQITKRGFSSEGEY 666
Query: 132 VGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPV-R 190
+G +L+ MY M S + +A LF E +
Sbjct: 667 LGISLLGMY-------------------------------MNSRGMTEACALFSELSSPK 695
Query: 191 NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVH 250
+ + WT ++ G + +++AL+ ++EM+ GV PD T +H
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH 755
Query: 251 RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT-MVSWNSIIVGFAANGL 309
L+ D + SN+LIDMYA+CG ++ + QVFD M R+ +VSWNS+I G+A NG
Sbjct: 756 SLIFHLAHDLDEL-TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG 369
A++AL F+SM++ PD +++ G LTACSHAG + +G +IF M I R++H
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 370 CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPG 429
C+VDL R G L+EA D I+ +KP+ + SLL ACR G+ E + L+EL+P
Sbjct: 875 CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ 934
Query: 430 GDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEE 489
S YVLLSNIYA+ G W+ AN +R+ M+DRG++K PG+S I+++ + F AGDKSH E
Sbjct: 935 NSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSE 994
Query: 490 NGSIYASLELL 500
G I LE L
Sbjct: 995 IGKIEMFLEDL 1005
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 172/376 (45%), Gaps = 41/376 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
AW S ++ + G+ + +FV + E ++ PN T +LS CA ++V FG
Sbjct: 125 VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCAR---ETNVEFGRQ 181
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDG----- 170
+H K+GL+ N G AL+DMYAK + AR VF+ + N V W + G
Sbjct: 182 IHCSMIKMGLERNSY-CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 240
Query: 171 ------------------------------YMRSGEIEDALQLFDEFPVRNAISWTALIG 200
Y+R G+++DA LF E + ++W +I
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 300
Query: 201 GFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLK 260
G K+ A+E F M+ S V T+ VH + + L
Sbjct: 301 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI-KLGLA 359
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM 320
N+ V +SL+ MY++C +E A +VF+ + + V WN++I G+A NG + + + F M
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 321 QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
+ G+ D ++T L+ C+ + ++ G + F+ + +++A + LVD+Y++ G
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 381 LEEALDVIKNMPMKPN 396
LE+A + + M + N
Sbjct: 479 LEDARQIFERMCDRDN 494
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 206/483 (42%), Gaps = 69/483 (14%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
VAW I+ H + G A F MR++ V+ TL ++LS +++ G
Sbjct: 292 VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG---IVANLDLGLV 348
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VHA A KLGL N + VG++L+ MY+K
Sbjct: 349 VHAEAIKLGLASN-IYVGSSLVSMYSKCE------------------------------- 376
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++E A ++F+ +N + W A+I G+ + +E F +M+ SG D T
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
H +++ + L N+ V N+L+DMYA+CG +E ARQ+F+ M R V
Sbjct: 437 TCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+WN+II + + EA F M G DG L AC+H + +G ++
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV--HC 553
Query: 356 KRVRRIAPRIEHYG-CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
V+ R H G L+D+YS+ G +++A V ++P + + V + +L+A +
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAG---YSQNN 609
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNI------------------------YAAVGKWDGA 450
L E V+ + L G + + + + I +++ G++ G
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 451 NKVRRAMKDRGIRKKPG-FSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGY 509
+ + M RG+ + FS + SI + H +NG +L+ E++ G
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK-EMRHDGV 728
Query: 510 VPD 512
+PD
Sbjct: 729 LPD 731
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 161/362 (44%), Gaps = 55/362 (15%)
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTML 168
++ G VH+ + LG+D ++ ++G A++D+YAK V A FD + +++ +WN+ML
Sbjct: 75 ALRIGKAVHSKSLILGID-SEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSML 132
Query: 169 DGYMRSGE----IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
Y G+ + + LF+ N +++ ++ ++ + +E R++ S
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETN----VEFGRQIHCS--- 185
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
M + L+ N +L+DMYA+C I AR+
Sbjct: 186 -----------------------------MIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
VF+ ++ V W + G+ GL +EA+ F M+ EG PD +++ + G
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLG 401
+ + +F +M +P + + ++ + + G A++ NM +K LG
Sbjct: 277 LKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 402 SLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL---LSNIYAAVGKWDGANKVRRAMK 458
S+L+A + L V ++L G SN + L ++Y+ K + A KV A++
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKL--GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 459 DR 460
++
Sbjct: 390 EK 391
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V WT ++ H ++G EA + MR V P+ T +T+L C+ SS+ G +
Sbjct: 698 VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS---VLSSLREGRAI 754
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR-NLVSWNTMLDGYMRSG 175
H+ L D++++ T LIDMYAK G++ + VFD+M R N+VSWN++++GY ++G
Sbjct: 755 HSLIFHLAHDLDELTSNT-LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Query: 176 EIEDALQLFD 185
EDAL++FD
Sbjct: 814 YAEDALKIFD 823
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/459 (32%), Positives = 239/459 (52%), Gaps = 36/459 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V+W + I ++G EA F M+ ++ + ++L C +++ G
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACG---GLGAINEGKQ 291
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA + + + VG+ALIDMY K + A+ VF
Sbjct: 292 IHACIIRTNFQ-DHIYVGSALIDMYCKCKCLHYAKTVF---------------------- 328
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
D +N +SWTA++ G+ + ++A++ F +MQ SG+ PD+ T+
Sbjct: 329 ---------DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
H +T L V VSNSL+ +Y +CG I+ + ++F+ M R V
Sbjct: 380 ACANVSSLEEGSQFHGKAIT-SGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SW +++ +A G A E + F+ M + G +PDGV+ TG ++ACS AGL+++G R F M
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
I P I HY C++DL+SR+GRLEEA+ I MP P+ + +LL+ACR KG + +
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
+ + L+ELDP + Y LLS+IYA+ GKWD ++RR M+++ ++K+PG S I+
Sbjct: 559 GKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKG 618
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
++ F A D+S IYA LE L+ ++ GY PD S
Sbjct: 619 KLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTS 657
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 194/406 (47%), Gaps = 53/406 (13%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTF-VRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W I + SG + A + MR+ +TL+T+L + S VS G
Sbjct: 104 VTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSS---SNGHVSLGKQ 160
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H KLG + + + VG+ L+ MYA G + A+ VF + RN V +N+++ G + G
Sbjct: 161 IHGQVIKLGFE-SYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
IEDALQLF ++++SW A+I G + K+A+ECFREM++ G+ D
Sbjct: 220 MIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H ++ + + +D++ V ++LIDMY +C C+ A+ VFD M + +V
Sbjct: 279 ACGGLGAINEGKQIHACII-RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH-------------- 341
SW +++VG+ G A+EA+ F MQ+ G +PD + A++AC++
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 342 ---------------------AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
G ID+ R+FN+M ++ + +V Y++ GR
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-----WTAMVSAYAQFGR 452
Query: 381 LEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
E + + M +KP+ V L +++AC GL EK +Y
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISAC---SRAGLVEKGQRYF 495
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 137/326 (42%), Gaps = 37/326 (11%)
Query: 136 LIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISW 195
++ YA + AR VFD++ NL SWN +L Y ++G I + F++ P R+ ++W
Sbjct: 47 IVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTW 106
Query: 196 TALIGGFVKKDHHKQALECFREMQLSGVAP-DYVTVXXXXXXXXXXXXXXXXXWVHRLVM 254
LI G+ A++ + M A VT+ +H V+
Sbjct: 107 NVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI 166
Query: 255 TQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM------------------------- 289
+ + + V + L+ MYA GCI A++VF G+
Sbjct: 167 -KLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDAL 225
Query: 290 -LHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
L R M VSW ++I G A NGLA EA+ F M+ +G + D + L AC G
Sbjct: 226 QLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGA 285
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
I+EG +I + R I L+D+Y + L A V MK VV S
Sbjct: 286 INEGKQIHACIIRT-NFQDHIYVGSALIDMYCKCKCLHYAKTVFDR--MKQKNVV--SWT 340
Query: 405 AACRTKGEIGLAEKVMKYLVELDPGG 430
A G+ G AE+ +K +++ G
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRSG 366
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 240/456 (52%), Gaps = 10/456 (2%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
++ T+ I + + VEA+ F R+ + PN T T++ + V G
Sbjct: 58 VISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST---TSRDVKLGKQ 114
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H YA K+GL N V VG+A+++ Y K + AR FD N+VS ++ GY++
Sbjct: 115 LHCYALKMGLASN-VFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKH 173
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA-PDYVTVXXXX 234
E E+AL LF P R+ ++W A+IGGF + +++A+ F +M GV P+ T
Sbjct: 174 EFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAI 233
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML--HR 292
+H + + NV V NSLI Y++CG +E + F+ + R
Sbjct: 234 TAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQR 293
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKE-GFEPDGVSYTGALTACSHAGLIDEGLRI 351
+VSWNS+I G+A NG +EA++ F M K+ P+ V+ G L AC+HAGLI EG
Sbjct: 294 NIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMY 353
Query: 352 FNKMKRVRRIAP--RIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRT 409
FNK +EHY C+VD+ SR+GR +EA ++IK+MP+ P +LL C+
Sbjct: 354 FNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQI 413
Query: 410 KGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
LA+ ++ELDP S+YV+LSN Y+A+ W + +RR MK+ G+++ G S
Sbjct: 414 HSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCS 473
Query: 470 SIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
IE+ I FV DK++E +Y L L+S L+
Sbjct: 474 WIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 157/374 (41%), Gaps = 85/374 (22%)
Query: 168 LDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
L ++ S I +A ++FDE P + IS TA+IG FVK+ H +A + F+ + G+ P+
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
T +H + L NV V +++++ Y + + AR+ FD
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKM-GLASNVFVGSAVLNCYVKLSTLTDARRCFD 152
Query: 288 -------------------------------GMLHRTMVSWNSIIVGFAANGLADEALSF 316
M R++V+WN++I GF+ G +EA++
Sbjct: 153 DTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 317 FNSMQKEGFE-PDGVSYTGALTACS-----------HA---------------------- 342
F M +EG P+ ++ A+TA S HA
Sbjct: 213 FVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFY 272
Query: 343 ---GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL----DVIKNMPMKP 395
G +++ L FNK++ +R I + ++ Y+ GR EEA+ ++K+ ++P
Sbjct: 273 SKCGNMEDSLLAFNKLEEEQR---NIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRP 329
Query: 396 NEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSN------YVLLSNIYAAVGKWDG 449
N V + +L AC G I E M + ++ D N Y + ++ + G++
Sbjct: 330 NNVTILGVLFACNHAGLI--QEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKE 387
Query: 450 ANKVRRAMK-DRGI 462
A ++ ++M D GI
Sbjct: 388 AEELIKSMPLDPGI 401
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 232/432 (53%), Gaps = 32/432 (7%)
Query: 74 EAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSS--------VSFGATVHAYARK--- 122
+ S + M + V P+ T +L C+ S+ V G ++ Y +
Sbjct: 95 KTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALI 154
Query: 123 -LGLDMNDVKVGTALID---------------MYAKSGNVDSARLVFDQMGLRNLVSWNT 166
+ D+ + + L D YAK G +D A +FD+M ++ V+WN
Sbjct: 155 LFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNV 214
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
M+ G ++ E++ A +LFD F ++ ++W A+I G+V + K+AL F+EM+ +G PD
Sbjct: 215 MITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPD 274
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVS----NSLIDMYARCGCIEIA 282
VT+ +H ++ S+ ++ V N+LIDMYA+CG I+ A
Sbjct: 275 VVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRA 334
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
+VF G+ R + +WN++IVG A + A+ ++ F MQ+ P+ V++ G + ACSH+
Sbjct: 335 IEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHS 393
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGS 402
G +DEG + F+ M+ + I P I+HYGC+VD+ RAG+LEEA +++M ++PN +V +
Sbjct: 394 GRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRT 453
Query: 403 LLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
LL AC+ G + L + + L+ + +YVLLSNIYA+ G+WDG KVR+ D +
Sbjct: 454 LLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRV 513
Query: 463 RKKPGFSSIEID 474
+K G S IE D
Sbjct: 514 KKPTGVSLIEED 525
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 232/458 (50%), Gaps = 37/458 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V WT+ I+ + + + +A F +M PN TL +++ A + G +
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA---AERRGCCGHQL 183
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + K G D N V VG+AL+D+Y R G
Sbjct: 184 HGFCVKCGFDSN-VHVGSALLDLYT-------------------------------RYGL 211
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
++DA +FD RN +SW ALI G ++ ++ALE F+ M G P + +
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
WVH M + K N+L+DMYA+ G I AR++FD + R +VS
Sbjct: 272 CSSTGFLEQGKWVH-AYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WNS++ +A +G EA+ +F M++ G P+ +S+ LTACSH+GL+DEG + MK
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+ I P HY +VDL RAG L AL I+ MP++P + +LL ACR L
Sbjct: 391 K-DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELG 449
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
+++ ELDP +V+L NIYA+ G+W+ A +VR+ MK+ G++K+P S +EI+++
Sbjct: 450 AYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENA 509
Query: 477 IYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
I+ FVA D+ H + I E + +++ GYVPD S
Sbjct: 510 IHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTS 547
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 5/253 (1%)
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
++V NT+L+ Y + G +E+A ++F++ P R+ ++WT LI G+ + D AL F +M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G +P+ T+ +H + + NV V ++L+D+Y R G +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV-KCGFDSNVHVGSALLDLYTRYGLM 212
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
+ A+ VFD + R VSWN++I G A ++AL F M ++GF P SY AC
Sbjct: 213 DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYG-CLVDLYSRAGRLEEALDVIKNMPMKPNEV 398
S G +++G + M ++ + G L+D+Y+++G + +A + + K + V
Sbjct: 273 SSTGFLEQGKWVHAYM--IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVV 329
Query: 399 VLGSLLAACRTKG 411
SLL A G
Sbjct: 330 SWNSLLTAYAQHG 342
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 50/251 (19%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+ Q + ++ + N+L++MYA+CG +E AR+VF+ M R V+W ++I G++ + +A
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA 145
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTA--------CSHA----------------------- 342
L FFN M + G+ P+ + + + A C H
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 205
Query: 343 ----GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKP 395
GL+D+ +F+ ++ ++ + L+ ++R E+AL++ + M +P
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVS-----WNALIAGHARRSGTEKALELFQGMLRDGFRP 260
Query: 396 NEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSN----IYAAVGKWDGAN 451
+ SL AC + G + + V Y+++ G+ N +YA G A
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIK---SGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 452 KVRRAMKDRGI 462
K+ + R +
Sbjct: 318 KIFDRLAKRDV 328
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 228/429 (53%), Gaps = 39/429 (9%)
Query: 80 VRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDM 139
V+ E ++ P+ +T L+ C S G +H + K G+ ++D V T ++ +
Sbjct: 105 VKEEEEDITPSYLTFHFLIVACL---KACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRI 161
Query: 140 YAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALI 199
Y + +L+FD A ++FDE P + + W L+
Sbjct: 162 YVED------KLLFD-------------------------ARKVFDEIPQPDVVKWDVLM 190
Query: 200 GGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSL 259
G+V+ + LE F+EM + G+ PD +V W+H V + +
Sbjct: 191 NGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWI 250
Query: 260 KDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNS 319
+ +V V +L+DMYA+CGCIE A +VF+ + R + SW ++I G+AA G A +A + +
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDR 310
Query: 320 MQKE-GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
+++E G +PD V G L AC+H G ++EG + M+ I P+ EHY C+VDL RA
Sbjct: 311 IEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRA 370
Query: 379 GRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGG----DSNY 434
GRL++ALD+I+ MPMKP V G+LL CRT + L E ++ L++L+ G ++
Sbjct: 371 GRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAAL 430
Query: 435 VLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIY 494
V LSNIY +V + A KVR ++ RGIRK PG+S +E+D + KFV+GD SH I+
Sbjct: 431 VQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIH 490
Query: 495 ASLELLSFE 503
+ LLS +
Sbjct: 491 TLIHLLSVD 499
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W + + R G E F M +EP+ ++ T L+ CA +++ G
Sbjct: 183 VVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQV---GALAQGKW 239
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H + +K +DV VGTAL+DMYAK G +++A VF+++ RN+ SW ++ GY G
Sbjct: 240 IHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYG 299
Query: 176 EIEDALQLFDEFPVRNAI 193
+ A D + I
Sbjct: 300 YAKKATTCLDRIEREDGI 317
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 242/457 (52%), Gaps = 36/457 (7%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
++W S I + + Q + A S F MR + ++P+ +TLI+L S + + +V
Sbjct: 314 ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL---GDIRACRSV 370
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
+ + G + D+ +G A++ MYAK G VDSAR VF +W
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF---------NW------------ 409
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-VAPDYVTVXXXXX 235
P + ISW +I G+ + +A+E + M+ G +A + T
Sbjct: 410 ----------LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 459
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H ++ ++ L +V V SL DMY +CG +E A +F + V
Sbjct: 460 ACSQAGALRQGMKLHGRLL-KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
WN++I +G ++A+ F M EG +PD +++ L+ACSH+GL+DEG F M
Sbjct: 519 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 578
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
+ I P ++HYGC+VD+Y RAG+LE AL IK+M ++P+ + G+LL+ACR G + L
Sbjct: 579 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDL 638
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
+ ++L E++P +VLLSN+YA+ GKW+G +++R +G+RK PG+SS+E+D+
Sbjct: 639 GKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDN 698
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
+ F G+++H +Y L L +L++ GYVPD
Sbjct: 699 KVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPD 735
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 190/388 (48%), Gaps = 46/388 (11%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
+W + I+ +C+SG EA + +R + ++T+++LLS C + G T+H
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACT---EAGDFNRGVTIH 270
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
+Y+ K GL+ +++ V LID+YA+ G +
Sbjct: 271 SYSIKHGLE-SELFVSNKLIDLYAEFG-------------------------------RL 298
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
D ++FD VR+ ISW ++I + + +A+ F+EM+LS + PD +T+
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
V + + +++ + N+++ MYA+ G ++ AR VF+ + + ++SW
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
N+II G+A NG A EA+ +N M++EG + ++ L ACS AG + +G+++ ++
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+ + + L D+Y + GRLE+AL + +P + N V +L+A G G
Sbjct: 479 K-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIAC---HGFHGHG 533
Query: 417 EK-VMKYLVELDPGGDSNYVLLSNIYAA 443
EK VM + LD G +++ + +A
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 142/349 (40%), Gaps = 46/349 (13%)
Query: 47 RHNTKHTD--PTVAWTSSIAHHCRSGQLVEAASTF-VRMREAEVEPNNITLITLLSGCAH 103
RH H AW I+ + R+G E F + M + + P+ T ++L C
Sbjct: 106 RHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC-- 163
Query: 104 YPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVS 163
+V G +H A K G M DV V +LI +Y++ V +AR+
Sbjct: 164 ----RTVIDGNKIHCLALKFGF-MWDVYVAASLIHLYSRYKAVGNARI------------ 206
Query: 164 WNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
LFDE PVR+ SW A+I G+ + + K+AL ++
Sbjct: 207 -------------------LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR---- 243
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
A D VTV +H + + L+ + VSN LID+YA G + +
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSI-KHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 284 QVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
+VFD M R ++SWNSII + N A+S F M+ +PD ++ + S G
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP 392
I + R I +V +Y++ G ++ A V +P
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 11/254 (4%)
Query: 142 KSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGG 201
+S ARLV + ++N+ +++ Y G + A FD R+ +W +I G
Sbjct: 68 QSAKCLHARLVVSKQ-IQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 202 FVKKDHHKQALECFREMQLS-GVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLK 260
+ + + + + CF LS G+ PDY T +H L + +
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK---IHCLALKFGFMW 183
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM 320
D V V+ SLI +Y+R + AR +FD M R M SWN++I G+ +G A EAL+ N +
Sbjct: 184 D-VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 321 QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
+ D V+ L+AC+ AG + G+ I + + + + L+DLY+ GR
Sbjct: 243 RA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGR 297
Query: 381 LEEALDVIKNMPMK 394
L + V M ++
Sbjct: 298 LRDCQKVFDRMYVR 311
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 244/450 (54%), Gaps = 18/450 (4%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + IA H ++G+ E FV M + +EP+ T ++L C + S+ +G +
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC----TGGSLGYGMEI 504
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H+ K G+ N VG +LIDMY+K G ++ A + + R VS G
Sbjct: 505 HSSIVKSGMASNS-SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GT 552
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+E+ ++ ++ +SW ++I G+V K+ + A F M G+ PD T
Sbjct: 553 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 612
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H V+ ++ L+ +V + ++L+DMY++CG + +R +F+ L R V+
Sbjct: 613 CANLASAGLGKQIHAQVIKKE-LQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT 671
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WN++I G+A +G +EA+ F M E +P+ V++ L AC+H GLID+GL F MK
Sbjct: 672 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 731
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRT-KGEIGL 415
R + P++ HY +VD+ ++G+++ AL++I+ MP + ++V+ +LL C + + +
Sbjct: 732 RDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEV 791
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
AE+ L+ LDP S Y LLSN+YA G W+ + +RR M+ ++K+PG S +E+
Sbjct: 792 AEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKD 851
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQ 505
++ F+ GDK+H IY L L+ E++
Sbjct: 852 ELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 149/330 (45%), Gaps = 40/330 (12%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V+W++ IA ++ L A F M++ + ++L CA + S + G
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA---ALSELRLGGQ 302
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA+A K + + V TA +DMYAK N
Sbjct: 303 LHAHALKSDFAADGI-VRTATLDMYAKCDN------------------------------ 331
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++DA LFD N S+ A+I G+ +++H +AL F + SG+ D +++
Sbjct: 332 -MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
++ L + + SL +V V+N+ IDMY +C + A +VFD M R V
Sbjct: 391 ACALVKGLSEGLQIYGLAI-KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 449
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN+II NG E L F SM + EPD ++ L AC+ G + G+ I + +
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI 508
Query: 356 KRVRRIAPRIEHYGC-LVDLYSRAGRLEEA 384
V+ GC L+D+YS+ G +EEA
Sbjct: 509 --VKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 2/259 (0%)
Query: 132 VGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRN 191
V L+ +Y S + SA +VFD+M LR++VSWN M++GY +S ++ A F+ PVR+
Sbjct: 85 VLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRD 144
Query: 192 AISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHR 251
+SW +++ G+++ +++E F +M G+ D T +H
Sbjct: 145 VVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHG 204
Query: 252 LVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLAD 311
+V+ D V S +L+DMYA+ + +VF G+ + VSW++II G N L
Sbjct: 205 IVVRVGCDTDVVAAS-ALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 263
Query: 312 EALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCL 371
AL FF MQK Y L +C+ + G ++ + A I L
Sbjct: 264 LALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 323
Query: 372 VDLYSRAGRLEEALDVIKN 390
D+Y++ +++A + N
Sbjct: 324 -DMYAKCDNMQDAQILFDN 341
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 180/441 (40%), Gaps = 73/441 (16%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W S ++ + ++G+ +++ FV M +E + T +L C+ S G
Sbjct: 145 VVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTS---LGMQ 201
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H ++G D DV +AL+DMYAK + VF + +N VSW+ ++ G +++
Sbjct: 202 IHGIVVRVGCD-TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ AL+ F E NA ++ ++ + E++L G
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLR------SCAALSELRLGG------------- 301
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H + D D + V + +DMYA+C ++ A+ +FD +
Sbjct: 302 ------------QLHAHALKSDFAADGI-VRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
S+N++I G++ +AL F+ + G D +S +G AC+ + EGL+I+
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM------------------------ 391
+ ++ + +D+Y + L EA V M
Sbjct: 409 IK-SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 467
Query: 392 ----------PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNY-VLLSNI 440
++P+E GS+L AC T G +G ++ +V+ +S+ L ++
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 526
Query: 441 YAAVGKWDGANKVRRAMKDRG 461
Y+ G + A K+ R
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRA 547
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 40 TNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLS 99
T + HN + + V+W S I+ + Q +A F RM E + P+ T T+L
Sbjct: 552 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 611
Query: 100 GCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR 159
CA+ +S G +HA K L +DV + + L+DMY+K G++ +RL+F++ R
Sbjct: 612 TCANL---ASAGLGKQIHAQVIKKELQ-SDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRN 191
+ V+WN M+ GY G+ E+A+QLF+ + N
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERMILEN 699
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 149/474 (31%), Positives = 240/474 (50%), Gaps = 38/474 (8%)
Query: 51 KHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSV 110
+H VAW + +A + +S + F M + ++ TL T+ C ++
Sbjct: 477 RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL---FAI 533
Query: 111 SFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDG 170
+ G VHAYA K G D+ D+ V + ++DMY K G++ +A+
Sbjct: 534 NQGKQVHAYAIKSGYDL-DLWVSSGILDMYVKCGDMSAAQFA------------------ 574
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
FD PV + ++WT +I G ++ ++A F +M+L GV PD T+
Sbjct: 575 -------------FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H + + D V SL+DMYA+CG I+ A +F +
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPF-VGTSLVDMYAKCGSIDDAYCLFKRIE 680
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ +WN+++VG A +G E L F M+ G +PD V++ G L+ACSH+GL+ E +
Sbjct: 681 MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK 740
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
M I P IEHY CL D RAG +++A ++I++M M+ + + +LLAACR +
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQ 800
Query: 411 GEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
G+ ++V L+EL+P S YVLLSN+YAA KWD R MK ++K PGFS
Sbjct: 801 GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 860
Query: 471 IEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP--DFSDKETYEDD 522
IE+ + I+ FV D+S+ + IY ++ + +++ GYVP DF+ + E++
Sbjct: 861 IEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEE 914
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 175/405 (43%), Gaps = 61/405 (15%)
Query: 30 NPTFSPYNPNTNQSFSLRHNTKHTD-PTVAWTSSIAHHCRSGQLV-----EAASTFVRMR 83
N S Y+ + +++ R K D V+W S +A + +S + V +A F +R
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 84 EAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKS 143
+ V + +TL +L C H V + H YA K+GLD D V AL+++Y K
Sbjct: 138 QDVVYTSRMTLSPMLKLCLH---SGYVWASESFHGYACKIGLD-GDEFVAGALVNIYLKF 193
Query: 144 GNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEF------PVRNAISWTA 197
G V +++F++M R++V WN ML Y+ G E+A+ L F P + A
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 198 LIGG--------------------------------FVKKDHHKQALECFREMQLSGVAP 225
I G ++ + L+CF +M S V
Sbjct: 254 RISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 226 DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
D VT VH + + + L + VSNSLI+MY + AR V
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMAL-KLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
FD M R ++SWNS+I G A NGL EA+ F + + G +PD + T L A S +
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---L 429
Query: 346 DEGLRIFNKMKRVRRIAPRIEHYG------CLVDLYSRAGRLEEA 384
EGL + K+V A +I + L+D YSR ++EA
Sbjct: 430 PEGLSL---SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 156/378 (41%), Gaps = 52/378 (13%)
Query: 42 QSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGC 101
+SF+ ++ + ++ + SGQ F M E++VE + +T I +L
Sbjct: 266 KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML--- 322
Query: 102 AHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL 161
A S++ G VH A KLGLD+ + V +LI+MY K AR VFD M
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLM-LTVSNSLINMYCKLRKFGFARTVFDNMS---- 377
Query: 162 VSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS 221
R+ ISW ++I G + +A+ F ++
Sbjct: 378 ---------------------------ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 222 GVAPD-YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIE 280
G+ PD Y VH + +++ D+ VS +LID Y+R C++
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF-VSTALIDAYSRNRCMK 469
Query: 281 IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
A +F+ + +V+WN+++ G+ + + L F M K+G D + C
Sbjct: 470 EAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 341 HAGLIDEGLRIFNKMKRVRRIAPRIEH------YGCLVDLYSRAGRLEEALDVIKNMPMK 394
I++G K+V A + + ++D+Y + G + A ++P+
Sbjct: 529 FLFAINQG-------KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV- 580
Query: 395 PNEVVLGSLLAACRTKGE 412
P++V ++++ C GE
Sbjct: 581 PDDVAWTTMISGCIENGE 598
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 267 NSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLA-----DEALSFFNSMQ 321
N+LI MY++CG + AR+VFD M R +VSWNSI+ +A + +A F ++
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL 381
++ ++ + L C H+G + ++ G LV++Y + G++
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA-GALVNIYLKFGKV 196
Query: 382 EEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVM 420
+E + + MP + +VVL +L+ + E+G E+ +
Sbjct: 197 KEGKVLFEEMPYR--DVVLWNLML--KAYLEMGFKEEAI 231
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
Query: 144 GNVDSAR-LVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGF 202
G AR L F++ R L+ N ++ Y + G + A ++FD+ P R+ +SW +++ +
Sbjct: 58 GKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 203 VKK-----DHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQD 257
+ ++ +QA FR ++ V +T+ H +
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA-CKI 174
Query: 258 SLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFF 317
L + V+ +L+++Y + G ++ + +F+ M +R +V WN ++ + G +EA+
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 318 NSMQKEGFEPDGVS 331
++ G P+ ++
Sbjct: 235 SAFHSSGLNPNEIT 248
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 210/369 (56%), Gaps = 5/369 (1%)
Query: 152 VFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQA 211
+F L + + T++D Y DA ++FDE P R+ +SW L +++ +
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 212 LECFREMQ--LSG-VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNS 268
L F +M+ + G V PD VT VH + ++ L + +SN+
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI-DENGLSGALNLSNT 257
Query: 269 LIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
L+ MY+RCG ++ A QVF GM R +VSW ++I G A NG EA+ FN M K G P+
Sbjct: 258 LVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPE 317
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVR-RIAPRIEHYGCLVDLYSRAGRLEEALDV 387
+ TG L+ACSH+GL+ EG+ F++M+ +I P + HYGC+VDL RA L++A +
Sbjct: 318 EQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSL 377
Query: 388 IKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKW 447
IK+M MKP+ + +LL ACR G++ L E+V+ +L+EL +YVLL N Y+ VGKW
Sbjct: 378 IKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKW 437
Query: 448 DGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLC 507
+ ++R MK++ I KPG S+IE+ ++++F+ D SH IY L ++ +L++
Sbjct: 438 EKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIA 497
Query: 508 GYVPDFSDK 516
GYV + + +
Sbjct: 498 GYVAEITSE 506
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 133/343 (38%), Gaps = 75/343 (21%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMR---EAEVEPNNITLITLLSGCAHYPSPSSVSF 112
TV+W + + R+ + + F +M+ + V+P+ +T + L CA+ ++ F
Sbjct: 179 TVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANL---GALDF 235
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G VH + + GL + + L+ MY++ G++D A VF M RN+VSW ++ G
Sbjct: 236 GKQVHDFIDENGLS-GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLA 294
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX- 231
+G K+A+E F EM G++P+ T+
Sbjct: 295 MNG-------------------------------FGKEAIEAFNEMLKFGISPEEQTLTG 323
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
+ R+ + +K N+ ++D+ R AR
Sbjct: 324 LLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR------AR-------- 369
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
L D+A S SM+ +PD + L AC G ++ G R+
Sbjct: 370 -----------------LLDKAYSLIKSME---MKPDSTIWRTLLGACRVHGDVELGERV 409
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
+ + ++ A Y L++ YS G+ E+ ++ M K
Sbjct: 410 ISHLIELK--AEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEK 450
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 249/483 (51%), Gaps = 37/483 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMR-EAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
+ WT+ I + ++G + F+RMR E +V+ N+ TL + C + G+
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE---GS 295
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVF--------------------- 153
+H ++ L+ D+ +G +L+ MY+K G + A+ VF
Sbjct: 296 QIHGLVSRMPLEF-DLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQR 354
Query: 154 ----------DQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFV 203
++M +++VSW M+ G+ GEI ++LF P ++ I+WTA+I FV
Sbjct: 355 KQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFV 414
Query: 204 KKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNV 263
++++AL F +M V P+ T +H V+ + + D +
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND-L 473
Query: 264 RVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKE 323
V NSL+ MY +CG A ++F + +VS+N++I G++ NG +AL F+ ++
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESS 533
Query: 324 GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEE 383
G EP+GV++ L+AC H G +D G + F MK I P +HY C+VDL R+G L++
Sbjct: 534 GKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDD 593
Query: 384 ALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAA 443
A ++I MP KP+ V GSLL+A +T + LAE K L+EL+P + YV+LS +Y+
Sbjct: 594 ASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSI 653
Query: 444 VGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFE 503
+GK +++ K + I+K PG S I + ++ F+AGD+S I +L+++ E
Sbjct: 654 IGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKE 713
Query: 504 LQL 506
++L
Sbjct: 714 MEL 716
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 189/463 (40%), Gaps = 38/463 (8%)
Query: 28 QANPTFSPYNPNTN-QSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAE 86
Q N S + N N Q V+W + I+ + +G++ +A F M
Sbjct: 52 QCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRV 111
Query: 87 VEPNNITLITLLS-----GCAH-----YPSPSSVSFGATVHAYARKLGLD---------- 126
N + ++ G A+ P ++VS+ + + R D
Sbjct: 112 TTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETP 171
Query: 127 --MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLF 184
D L+ Y ++G + A VF M ++ +VS ++M+ GY + G I DA LF
Sbjct: 172 VKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLF 231
Query: 185 DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-VAPDYVTVXXXXXXXXXXXXX 243
D RN I+WTA+I G+ K + F M+ G V + T+
Sbjct: 232 DRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRY 291
Query: 244 XXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVG 303
+H LV ++ L+ ++ + NSL+ MY++ G + A+ VF M ++ VSWNS+I G
Sbjct: 292 REGSQIHGLV-SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITG 350
Query: 304 FAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAP 363
EA F M + D VS+T + S G I + + +F M I
Sbjct: 351 LVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT- 405
Query: 364 RIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKGEIGLAEKVM 420
+ ++ + G EEAL M K PN S+L+A + ++ ++
Sbjct: 406 ----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 421 KYLVELDPGGD-SNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
+V+++ D S L ++Y G + A K+ + + I
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 230/420 (54%), Gaps = 42/420 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT I R+G EA TF +M +VEPN T + +L +S G
Sbjct: 172 VVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRV---GCLSLGKG 225
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H L+ + L +L + N ++D Y++
Sbjct: 226 IHG--------------------------------LILKRASLISLETGNALIDMYVKCE 253
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS-GVAPDYVTVXXXX 234
++ DA+++F E ++ +SW ++I G V + K+A++ F MQ S G+ PD +
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
WVH ++T +K + + +++DMYA+CG IE A ++F+G+ + +
Sbjct: 314 SACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 372
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
+WN+++ G A +G E+L +F M K GF+P+ V++ AL AC H GL+DEG R F+K
Sbjct: 373 FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK 432
Query: 355 MK-RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
MK R + P++EHYGC++DL RAG L+EAL+++K MP+KP+ + G++L+AC+ +G +
Sbjct: 433 MKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTL 492
Query: 414 -GLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
L ++++ ++++ YVLLSNI+AA +WD ++RR MK +GI K PG S IE
Sbjct: 493 MELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N+++ Y GE +A ++F E PVR+ +SWT +I GF + +K+AL+ F +M V
Sbjct: 145 NSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VE 201
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
P+ T +H L++ + SL ++ N+LIDMY +C + A +
Sbjct: 202 PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI-SLETGNALIDMYVKCEQLSDAMR 260
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ-KEGFEPDGVSYTGALTACSHAG 343
VF + + VSWNS+I G + EA+ F+ MQ G +PDG T L+AC+ G
Sbjct: 261 VFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLG 320
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
+D G R ++ I +VD+Y++ G +E AL++ + K
Sbjct: 321 AVDHG-RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK 370
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 128/311 (41%), Gaps = 43/311 (13%)
Query: 189 VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXW 248
V ++ S+ L+ + D + + ++ +G +PD T
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
+H +V T+ D++ V NSL+ Y CG A +VF M R +VSW II GF G
Sbjct: 128 IHGIV-TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK-MKRVRRIAPRIEH 367
L EAL F+ M EP+ +Y L + G + G I +KR I+ +E
Sbjct: 187 LYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS--LET 241
Query: 368 YGCLVDLYSRA----------GRLE---------------------EALDVIKNMP---- 392
L+D+Y + G LE EA+D+ M
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 393 MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNY-VLLSNIYAAVGKWDGAN 451
+KP+ +L S+L+AC + G + V +Y++ D++ + ++YA G + A
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 452 KVRRAMKDRGI 462
++ ++ + +
Sbjct: 362 EIFNGIRSKNV 372
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 246/463 (53%), Gaps = 20/463 (4%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
VA T+ I CR G++ EA F MRE V +T T+++G Y + V
Sbjct: 172 VVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITG---YRQNNRVDV--- 221
Query: 116 VHAYARKLGLDMND-VKVG-TALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
ARKL M + +V T+++ Y SG ++ A F+ M ++ +++ N M+ G+
Sbjct: 222 ----ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGE 277
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
GEI A ++FD R+ +W +I + +K +AL+ F +MQ GV P + ++
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337
Query: 234 XXXXXXXXXXXXXXWVH-RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
VH LV Q D+V V++ L+ MY +CG + A+ VFD +
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQ--FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK 395
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
++ WNSII G+A++GL +EAL F+ M G P+ V+ LTACS+AG ++EGL IF
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
M+ + P +EHY C VD+ RAG++++A+++I++M +KP+ V G+LL AC+T
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
+ LAE K L E +P YVLLS+I A+ KW VR+ M+ + K PG S IE
Sbjct: 516 LDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575
Query: 473 IDSSIYKFVAGD-KSHEENGSIYASLELLSFELQLCGYVPDFS 514
+ ++ F G K+H E I LE L+ GY PD S
Sbjct: 576 VGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCS 618
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 154/393 (39%), Gaps = 89/393 (22%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT+ + + + G + EA S F RM E N ++ + G
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDK------ 159
Query: 116 VHAYARKL--GLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
ARKL + + DV T +I + G VD ARL+FD+M RN+V+W TM+ GY +
Sbjct: 160 ----ARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
+ ++ A +LF+ P + +SWT+++ G+ + A E F M + V
Sbjct: 216 NNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVI--------- 266
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
N++I + G I AR+VFD M R
Sbjct: 267 -------------------------------ACNAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+W +I + G EAL F MQK+G P S L+ C+ + G ++
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 354 KMKRV------------------------------RRIAPRIEHYGCLVDLYSRAGRLEE 383
+ R R + I + ++ Y+ G EE
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 384 ALDVIKNMP---MKPNEVVLGSLLAACRTKGEI 413
AL + MP PN+V L ++L AC G++
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 28/335 (8%)
Query: 120 ARKLGLDMNDVKVGT--ALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
AR+L +M++ V + L+ Y K+ + AR VF+ M RN+VSW M+ GYM+ G +
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMV 126
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
+A LF P RN +SWT + GG + +A + + M + V +
Sbjct: 127 GEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREG 186
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKD-NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
RL+ D +++ NV ++I Y + +++AR++F+ M +T VS
Sbjct: 187 RVDEA--------RLIF--DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS 236
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W S+++G+ +G ++A FF M + ++ + G I + R+F+ M+
Sbjct: 237 WTSMLLGYTLSGRIEDAEEFFEVMPMKPV----IACNAMIVGFGEVGEISKARRVFDLME 292
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAACRTKGEI 413
R ++ Y R G EALD+ M ++P+ L S+L+ C T +
Sbjct: 293 DRDNATWR-----GMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Query: 414 GLAEKVMKYLVELDPGGDSNYV--LLSNIYAAVGK 446
+V +LV D YV +L +Y G+
Sbjct: 348 QYGRQVHAHLVRCQFDDDV-YVASVLMTMYVKCGE 381
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 267 NSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFE 326
NS++ Y G + ARQ+FD M R +VSWN ++ G+ N + EA + F M E
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP----E 107
Query: 327 PDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALD 386
+ VS+T + G++ E +F +M ++ + +G L+D GR+++A
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTV-MFGGLID----DGRIDKARK 162
Query: 387 VIKNMPMK 394
+ MP+K
Sbjct: 163 LYDMMPVK 170
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 13/193 (6%)
Query: 270 IDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDG 329
I +R G I AR+ FD + + + SWNSI+ G+ +NGL EA F+ M E +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS----ERNV 79
Query: 330 VSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIK 389
VS+ G ++ +I E +F M ++ + +V Y + G + EA +
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVS-----WTAMVKGYMQEGMVGEAESLFW 134
Query: 390 NMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDG 449
MP + NEV + G I A K+ + D +N + G+ D
Sbjct: 135 RMPER-NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMI---GGLCREGRVDE 190
Query: 450 ANKVRRAMKDRGI 462
A + M++R +
Sbjct: 191 ARLIFDEMRERNV 203
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 235/445 (52%), Gaps = 41/445 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
T +W IA +G EA S F +MR + P+ I+L +LL CA P ++S G
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQ-TKPMALSQGMQ 392
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H+Y K G L +L N++L Y
Sbjct: 393 IHSYIIKWGF--------------------------------LADLTVCNSLLTMYTFCS 420
Query: 176 EIEDALQLFDEFPVRN---AISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
++ LF++F RN ++SW ++ ++ + + L F+ M +S PD++T+
Sbjct: 421 DLYCCFNLFEDF--RNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGN 478
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
VH + + L + N LIDMYA+CG + AR++FD M +R
Sbjct: 479 LLRGCVEISSLKLGSQVHCYSL-KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+VSW+++IVG+A +G +EAL F M+ G EP+ V++ G LTACSH GL++EGL+++
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
M+ I+P EH C+VDL +RAGRL EA I M ++P+ VV +LL+AC+T+G
Sbjct: 598 ATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGN 657
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
+ LA+K + ++++DP + +VLL +++A+ G W+ A +R +MK ++K PG S IE
Sbjct: 658 VHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIE 717
Query: 473 IDSSIYKFVAGDKSHEENGSIYASL 497
I+ I+ F A D H E IY L
Sbjct: 718 IEDKIHIFFAEDIFHPERDDIYTVL 742
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 187/444 (42%), Gaps = 76/444 (17%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V++TS I + ++GQ EA +++M + ++ P+ +++ CA S S V G +
Sbjct: 134 VSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA---SSSDVGLGKQL 190
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA KL +S+ +L++ N ++ Y+R +
Sbjct: 191 HAQVIKL-----------------------ESSS---------HLIAQNALIAMYVRFNQ 218
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV-APDYVTVXXXXX 235
+ DA ++F P+++ ISW+++I GF + +AL +EM GV P+
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H L + + L N SL DMYARCG + AR+VFD +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSE-LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTA 337
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN II G A NG ADEA+S F+ M+ GF PD +S L A + + +G++I + +
Sbjct: 338 SWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYI 397
Query: 356 KRVRRIA------PRIEHYGCLVDLYSRAGRLE-------------------------EA 384
+ +A + Y DLY E E
Sbjct: 398 IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEM 457
Query: 385 LDVIKNMPM---KPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL---LS 438
L + K M + +P+ + +G+LL C + L +V Y L G + L
Sbjct: 458 LRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY--SLKTGLAPEQFIKNGLI 515
Query: 439 NIYAAVGKWDGANKVRRAMKDRGI 462
++YA G A ++ +M +R +
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDV 539
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 36/266 (13%)
Query: 44 FSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAH 103
F+L + ++ +V+W + + + Q VE F M +E EP++IT+ LL GC
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVE 485
Query: 104 YPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVS 163
SS+ G+ VH Y+ K GL + LIDMYAK G++ AR +FD M R++VS
Sbjct: 486 I---SSLKLGSQVHCYSLKTGLAPEQF-IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS 541
Query: 164 WNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
W+T++ GY +SG E+AL L F+EM+ +G+
Sbjct: 542 WSTLIVGYAQSGFGEEALIL-------------------------------FKEMKSAGI 570
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
P++VT ++ + T+ + + ++D+ AR G + A
Sbjct: 571 EPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAE 630
Query: 284 QVFDGM-LHRTMVSWNSIIVGFAANG 308
+ D M L +V W +++ G
Sbjct: 631 RFIDEMKLEPDVVVWKTLLSACKTQG 656
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 6/249 (2%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N +L Y + G + DA ++FD P RN +S+T++I G+ + +A+ + +M +
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
PD +H V+ +S ++ N+LI MY R + A +
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES-SSHLIAQNALIAMYVRFNQMSDASR 224
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAG 343
VF G+ + ++SW+SII GF+ G EALS M G F P+ + +L ACS
Sbjct: 225 VFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLL 284
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGC-LVDLYSRAGRLEEALDVIKNMPMKPNEVVLGS 402
D G +I + I GC L D+Y+R G L A V + +P+
Sbjct: 285 RPDYGSQIHGLCIKSELAGNAIA--GCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNV 341
Query: 403 LLAACRTKG 411
++A G
Sbjct: 342 IIAGLANNG 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
+H ++ + D + ++N ++ MY +CG + AR+VFD M R +VS+ S+I G++ NG
Sbjct: 89 IHDHILNSNCKYDTI-LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNG 147
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY 368
EA+ + M +E PD ++ + AC+ + + G ++ ++ ++ + I
Sbjct: 148 QGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ- 206
Query: 369 GCLVDLYSRAGRLEEALDVIKNMPMK---------------------------------- 394
L+ +Y R ++ +A V +PMK
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 395 -PNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS-NYVLLSNIYAAVGKWDGANK 452
PNE + GS L AC + ++ ++ + G++ L ++YA G + A +
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARR 326
Query: 453 V 453
V
Sbjct: 327 V 327
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 228/459 (49%), Gaps = 39/459 (8%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
W + + R+G +A +V M + +EP N ++ L C
Sbjct: 203 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKAC---------------- 246
Query: 118 AYARKLGLDMNDVKVGTAL-IDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
+D+ D++VG + + + VD V +N +L YM SG
Sbjct: 247 -------VDLKDLRVGRGIHAQIVKRKEKVDQ-------------VVYNVLLKLYMESGL 286
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+DA ++FD RN ++W +LI KK + FR+MQ + + T+
Sbjct: 287 FDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPA 346
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H ++ K +V + NSL+DMY +CG +E +R+VFD ML + + S
Sbjct: 347 CSRVAALLTGKEIHAQILKSKE-KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS 405
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WN ++ +A NG +E ++ F M + G PDG+++ L+ CS GL + GL +F +MK
Sbjct: 406 WNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMK 465
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
R++P +EHY CLVD+ RAG+++EA+ VI+ MP KP+ + GSLL +CR G + +
Sbjct: 466 TEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVG 525
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
E K L L+P NYV++SNIYA WD +K+R MK RG++K+ G S +++
Sbjct: 526 EIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDK 585
Query: 477 IYKFVAGDKSHEENGSIYASLEL-LSFELQLCGYVPDFS 514
I FVAG N Y + L ++ GY P+ S
Sbjct: 586 IQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTS 624
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W S I+ + ++ E + F +M+E + + TL T+L C+ +++ G
Sbjct: 302 VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV---AALLTGKE 358
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA K + DV + +L+DMY K G V+ +R VFD M ++L SWN ML+ Y +G
Sbjct: 359 IHAQILK-SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAING 417
Query: 176 EIEDALQLFDEF----PVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
IE+ + LF+ + I++ AL+ G + L F M+
Sbjct: 418 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMK 465
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 252 LVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS---WNSIIVGFAANG 308
L++ SL+ N ++ + LI +++ C +++AR++FD + ++++ W ++ +G++ NG
Sbjct: 156 LILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNG 215
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM-KRVRRIAPRIEH 367
+AL + M EP S + AL AC + G I ++ KR ++ +
Sbjct: 216 SPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVV-- 273
Query: 368 YGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
Y L+ LY +G ++A V M + N V SL++ K
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSER-NVVTWNSLISVLSKK 315
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 235/453 (51%), Gaps = 40/453 (8%)
Query: 56 TVAWTSSIAHHCRSG---QLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
V + + I + R G +L EA + F MR + P+ +T ++LL A S +S+
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA---SLTSLGL 472
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
+H K GL++ D+ G+ALID+Y+ + +RLVF
Sbjct: 473 SKQIHGLMFKYGLNL-DIFAGSALIDVYSNCYCLKDSRLVF------------------- 512
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
DE V++ + W ++ G+V++ +++AL F E+QLS PD T
Sbjct: 513 ------------DEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFAN 560
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
H ++ + L+ N ++N+L+DMYA+CG E A + FD R
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR 619
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+V WNS+I +A +G +AL M EG EP+ +++ G L+ACSHAGL+++GL+ F
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF 679
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
M R I P EHY C+V L RAGRL +A ++I+ MP KP +V SLL+ C G
Sbjct: 680 ELMLRFG-IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN 738
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
+ LAE + + DP ++ +LSNIYA+ G W A KVR MK G+ K+PG S I
Sbjct: 739 VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIG 798
Query: 473 IDSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
I+ ++ F++ DKSH + IY L+ L +++
Sbjct: 799 INKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 168/383 (43%), Gaps = 62/383 (16%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
TV WT+ I+ + G+ + F ++ E V P+ L T+LS C+ P G
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG---GKQ 270
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA+ + GL+M+ A L+ N ++D Y++ G
Sbjct: 271 IHAHILRYGLEMD--------------------ASLM------------NVLIDSYVKCG 298
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ A +LF+ P +N ISWT L+ G+ + HK+A+E F M G+ PD
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH + + +L ++ V+NSLIDMYA+C C+ AR+VFD +V
Sbjct: 359 SCASLHALGFGTQVHAYTI-KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 296 SWNSIIVGFAANGLA---DEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+N++I G++ G EAL+ F M+ P +++ L A A L GL
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLS-- 473
Query: 353 NKMKRVRRIAPRIEHYG---------CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSL 403
++I + YG L+D+YS L+++ V M +K + V+ S+
Sbjct: 474 ------KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSM 526
Query: 404 LAACRTKGEIGLAEKVMKYLVEL 426
A + E E+ + +EL
Sbjct: 527 FAGYVQQSE---NEEALNLFLEL 546
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 191/438 (43%), Gaps = 79/438 (18%)
Query: 63 IAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHY------------------ 104
I + R+G +V A F +M E N ++ T++S C H+
Sbjct: 86 INLYSRAGGMVYARKVFEKMPE----RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRK 141
Query: 105 PSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSW 164
SP+ + + A + GLD + L KSG FD R++
Sbjct: 142 DSPNEYILSSFIQACS---GLDGRGRWMVFQLQSFLVKSG--------FD----RDVYVG 186
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
++D Y++ G I+ A +FD P ++ ++WT +I G VK +L+ F ++ V
Sbjct: 187 TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
PD + +H ++ + L+ + + N LID Y +CG + A +
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHIL-RYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS---- 340
+F+GM ++ ++SW +++ G+ N L EA+ F SM K G +PD + + LT+C+
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 341 -------HAGLIDEGL-----------RIFNK---MKRVRRI-----APRIEHYGCLVDL 374
HA I L ++ K + R++ A + + +++
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 375 YSRAG---RLEEALDVIKNMP---MKPNEVVLGSLLAACRTKGEIGLAEKV----MKYLV 424
YSR G L EAL++ ++M ++P+ + SLL A + +GL++++ KY +
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 425 ELDPGGDSNYV-LLSNIY 441
LD S + + SN Y
Sbjct: 486 NLDIFAGSALIDVYSNCY 503
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 152/385 (39%), Gaps = 88/385 (22%)
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
VH GL++ D + LI++Y+++G + AR VF++M RNLVSW+TM+
Sbjct: 65 VVHGQIIVWGLEL-DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHH 123
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP-DYVTVXXX 233
G E++L +F EF W +KD +P +Y+
Sbjct: 124 GIYEESLVVFLEF-------WRT------RKD-----------------SPNEYILSSFI 153
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+ + + + +V V LID Y + G I+ AR VFD + ++
Sbjct: 154 QACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
V+W ++I G G + +L F + ++ PDG + L+ACS ++ G
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG----- 268
Query: 354 KMKRVRRIAPRIEHYG---------CLVDLYSRAGRLEEALDVIKNMP------------ 392
++I I YG L+D Y + GR+ A + MP
Sbjct: 269 -----KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 393 ----------------------MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGG 430
+KP+ S+L +C + +G +V Y ++ + G
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 431 DSNYVL--LSNIYAAVGKWDGANKV 453
DS YV L ++YA A KV
Sbjct: 384 DS-YVTNSLIDMYAKCDCLTDARKV 407
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 22/273 (8%)
Query: 259 LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFN 318
L+ + +SN LI++Y+R G + AR+VF+ M R +VSW++++ +G+ +E+L F
Sbjct: 75 LELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFL 134
Query: 319 SMQKEGFE-PDGVSYTGALTACSHAGLIDEGLRIFNKMKR--VRRIAPRIEHYGC-LVDL 374
+ + P+ + + ACS GL G + +++ V+ R + G L+D
Sbjct: 135 EFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDF 192
Query: 375 YSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE--LDPGGDS 432
Y + G ++ A V +P K V ++++ C G ++ ++ L+E + P G
Sbjct: 193 YLKDGNIDYARLVFDALPEKST-VTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG-- 249
Query: 433 NYVLLSNIYAAVGK---WDGANKVRRAMKDRGIRKKPGFSSIEIDSSIY--KFVAGDKSH 487
+LS + +A +G ++ + G+ ++ IDS + + +A K
Sbjct: 250 --YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 488 EENGSIYASLELLSFELQLCGYVPDFSDKETYE 520
NG + ++S+ L GY + KE E
Sbjct: 308 --NG--MPNKNIISWTTLLSGYKQNALHKEAME 336
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 192/342 (56%), Gaps = 1/342 (0%)
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
Y + EIE A +LFDE P ++ SW A+I G+ + + A+ FREMQ S +P+ VT+
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
WVH LV + D + ++ VS +LI MYA+CG I AR++FD M
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTD-FESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ V+WN++I G+ +G EAL+ F M G P V++ L ACSHAGL+ EG
Sbjct: 483 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 542
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
IFN M P ++HY C+VD+ RAG L+ AL I+ M ++P V +LL ACR
Sbjct: 543 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
Query: 411 GEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
+ LA V + L ELDP +VLLSNI++A + A VR+ K R + K PG++
Sbjct: 603 KDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 662
Query: 471 IEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
IEI + + F +GD+SH + IY LE L +++ GY P+
Sbjct: 663 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPE 704
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 156/358 (43%), Gaps = 42/358 (11%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
T+ W + I+ + ++ VE+ F + E+ + TL+ +L A + G
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL---QELRLGM 241
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+H+ A K G +D V T I +Y+K G + +MG
Sbjct: 242 QIHSLATKTGCYSHDY-VLTGFISLYSKCGKI--------KMGS---------------- 276
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
LF EF + +++ A+I G+ + +L F+E+ LSG T+
Sbjct: 277 -------ALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H + + L + VS +L +Y++ IE AR++FD +++
Sbjct: 330 PVSGHLMLIYA---IHGYCLKSNFL-SHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
SWN++I G+ NGL ++A+S F MQK F P+ V+ T L+AC+ G + G + +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHD 444
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+ R I L+ +Y++ G + EA + M K NEV ++++ G+
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLHGQ 501
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 4/129 (3%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
+W + I+ + ++G +A S F M+++E PN +T+ +LS CA ++S G VH
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL---GALSLGKWVH 443
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
R + + + V TALI MYAK G++ AR +FD M +N V+WNTM+ GY G+
Sbjct: 444 DLVRSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 178 EDALQLFDE 186
++AL +F E
Sbjct: 503 QEALNIFYE 511
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 174/417 (41%), Gaps = 69/417 (16%)
Query: 77 STFVRMREA-EVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTA 135
S F +R++ +++PN+ T +S + + + G +H A G D +++ +G+
Sbjct: 104 SVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA---GRVIHGQAVVDGCD-SELLLGSN 159
Query: 136 LIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISW 195
++ MY K V+ AR VFD+M ++ + WNTM+ GY ++ +++Q+F R+ I+
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF-----RDLINE 214
Query: 196 TALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMT 255
+ C R D T+ +H L T
Sbjct: 215 S-----------------CTR--------LDTTTLLDILPAVAELQELRLGMQIHSLA-T 248
Query: 256 QDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALS 315
+ + V I +Y++CG I++ +F +V++N++I G+ +NG + +LS
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 316 FFNSMQKEGFEPDG------VSYTGALTAC-------------SHAGLIDEGLRIFNKMK 356
F + G V +G L SHA + +++K+
Sbjct: 309 LFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLN 368
Query: 357 RV---RRI---APR--IEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLA 405
+ R++ +P + + ++ Y++ G E+A+ + + M PN V + +L+
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 406 ACRTKGEIGLAEKVMKYLVELDPGGDSNYV--LLSNIYAAVGKWDGANKVRRAMKDR 460
AC G + L + V LV S YV L +YA G A ++ M +
Sbjct: 429 ACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 235/423 (55%), Gaps = 13/423 (3%)
Query: 55 PTV-AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSV--S 111
PT+ A+ I+ + + G + E RM + + + TL +L S + S
Sbjct: 98 PTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRS 157
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
VHA K ++++DV + TAL+D Y KSG ++SAR VF+ M N+V +M+ GY
Sbjct: 158 LCRLVHARIIKCDVELDDVLI-TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGY 216
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKK-DHHKQALECFREMQLSGVAPDYVTV 230
M G +EDA ++F+ V++ + + A++ GF + + K++++ + MQ +G P+ T
Sbjct: 217 MNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTF 276
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
VH +M + + ++++ +SL+DMYA+CG I AR+VFD M
Sbjct: 277 ASVIGACSVLTSHEVGQQVHAQIM-KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ 335
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ + SW S+I G+ NG +EAL F M++ EP+ V++ GAL+ACSH+GL+D+G
Sbjct: 336 EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYE 395
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
IF M+R + P++EHY C+VDL RAG L +A + + MP +P+ + +LL++C
Sbjct: 396 IFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLH 455
Query: 411 GEIGLAEKVMKYLVELD----PGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKP 466
G + LA L +L+ PG Y+ LSN+YA+ KWD +K+R MK R I K
Sbjct: 456 GNVELASIAASELFKLNADKRPGA---YLALSNVYASNDKWDNVSKIREVMKRRRISKTI 512
Query: 467 GFS 469
G S
Sbjct: 513 GRS 515
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 143/363 (39%), Gaps = 75/363 (20%)
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
+++ G + A Q+FDE P ++ +I G++K K+ L + M SG D T+
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 231 XXXXXXXXXXXXXXXX-----XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
VH ++ D D+V ++ +L+D Y + G +E AR V
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLIT-ALVDTYVKSGKLESARTV 197
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFN--------------------------- 318
F+ M +V S+I G+ G ++A FN
Sbjct: 198 FETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRS 257
Query: 319 -----SMQKEGFEPDGVSYTGALTACS-----------HAGLIDEGLRIFNKM------- 355
SMQ+ GF P+ ++ + ACS HA ++ G+ KM
Sbjct: 258 VDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDM 317
Query: 356 -------KRVRRIAPRIEH-----YGCLVDLYSRAGRLEEALDV---IKNMPMKPNEVVL 400
RR+ +++ + ++D Y + G EEAL++ +K ++PN V
Sbjct: 318 YAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTF 377
Query: 401 GSLLAACRTKGEIGLAEKV---MKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
L+AC G + ++ M+ + P + +Y + ++ G + A + RAM
Sbjct: 378 LGALSACSHSGLVDKGYEIFESMQRDYSMKPKME-HYACIVDLMGRAGDLNKAFEFARAM 436
Query: 458 KDR 460
+R
Sbjct: 437 PER 439
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+ + + ++ +S L+ ++ +CGC+ ARQVFD + T+ ++N +I G+ +GL E
Sbjct: 60 IIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKEL 119
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIE----HYG 369
L M G + DG + + L A + G R ++ R I +E
Sbjct: 120 LLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLIT 179
Query: 370 CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKV 419
LVD Y ++G+LE A V + M N V S+++ +G + AE++
Sbjct: 180 ALVDTYVKSGKLESARTVFETMK-DENVVCCTSMISGYMNQGFVEDAEEI 228
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 245/471 (52%), Gaps = 38/471 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREA--EVEPNNITLITLLSGCA----------HY 104
V+WT+ I+ + EA F+ M++ V PN TLI+L C
Sbjct: 263 VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQ 322
Query: 105 PSPSSVSFG------------ATVHAYA--------RKLGLDMNDVKVGTALIDMYAKSG 144
+S G + VH YA + L + D++ +I+ Y K+G
Sbjct: 323 LHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNG 382
Query: 145 NVDSARLVFDQM-GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFV 203
+++ A +F+++ L + VSW +M+DGY+ +G++ A LF + ++ ++WT +I G V
Sbjct: 383 DLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLV 442
Query: 204 KKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKD-N 262
+ + +A +M G+ P T +H ++ + D +
Sbjct: 443 QNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPD 502
Query: 263 VRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK 322
+ + NSL+ MYA+CG IE A ++F M+ + VSWNS+I+G + +GLAD+AL+ F M
Sbjct: 503 LILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLD 562
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLE 382
G +P+ V++ G L+ACSH+GLI GL +F MK I P I+HY ++DL RAG+L+
Sbjct: 563 SGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLK 622
Query: 383 EALDVIKNMPMKPNEVVLGSLLAAC----RTKGEIGLAEKVMKYLVELDPGGDSNYVLLS 438
EA + I +P P+ V G+LL C R K G+AE+ L+ELDP +V L
Sbjct: 623 EAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALC 682
Query: 439 NIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEE 489
N+YA +G+ D ++R+ M +G++K PG S + ++ F++GDKS E
Sbjct: 683 NVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASE 733
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 186/457 (40%), Gaps = 85/457 (18%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT + C G+ +A F M E V N TL+T L V F A
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN-TLVTGLIRNGDMEKAKQV-FDA- 194
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+ DV A+I Y ++ ++ A+L+F M +N+V+W +M+ GY R G
Sbjct: 195 ---------MPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYG 245
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ--LSGVAPDYVTVXXX 233
++ +A +LF E P RN +SWTA+I GF + +++AL F EM+ + V+P+ T+
Sbjct: 246 DVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL 305
Query: 234 XXXX--XXXXXXXXXXWVHRLVMTQ--DSLKDNVRVSNSLIDMYARCGCIE--------- 280
+H V++ +++ + R++ SL+ MYA G I
Sbjct: 306 AYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNES 365
Query: 281 ---------IARQVFDGMLHRT------------MVSWNSIIVGF--------------- 304
I R + +G L R VSW S+I G+
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 305 ----------------AANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
N L EA S + M + G +P +Y+ L++ +D+G
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 349 LRIFNKMKRVRRIA-PRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
I + + P + LV +Y++ G +E+A ++ M K + V S++
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK-DTVSWNSMIMGL 544
Query: 408 RTKGEIGLAEKVMKYLVE-LDPGGDSNYVLLSNIYAA 443
GLA+K + E LD G N V + +A
Sbjct: 545 SHH---GLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 55/286 (19%)
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDE 186
+N V T+L+ YAK+G +D AR++F+ M RN+V+ N ML GY++ + +A LF E
Sbjct: 74 INRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFRE 133
Query: 187 FPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
P +N +SWT ++ + A+E F EM
Sbjct: 134 MP-KNVVSWTVMLTALCDDGRSEDAVELFDEMP--------------------------- 165
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAA 306
+ NV N+L+ R G +E A+QVFD M R +VSWN++I G+
Sbjct: 166 -------------ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE 212
Query: 307 NGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIE 366
N +EA F M E + V++T + G + E R+F +M I
Sbjct: 213 NDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE-----RNIV 263
Query: 367 HYGCLVDLYSRAGRLEEALDVIKNM-----PMKPNEVVLGSLLAAC 407
+ ++ ++ EAL + M + PN L SL AC
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
H V WT I+ ++ EAAS M ++P N T LLS + S++
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG---ATSNLD 483
Query: 112 FGATVHAY-ARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDG 170
G +H A+ D+ + +L+ MYAK G ++ A +F +M ++ VSWN+M+ G
Sbjct: 484 QGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMG 543
Query: 171 YMRSGEIEDALQLFDEF----PVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
G + AL LF E N++++ ++ + LE F+ M+
Sbjct: 544 LSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 234/468 (50%), Gaps = 45/468 (9%)
Query: 46 LRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP 105
L H++ T T W + S VE+ + M+ ++PN +T LL CA +
Sbjct: 70 LLHSSDSTPST--WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFL 127
Query: 106 SPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWN 165
++ G + K G D DV VG LI +Y AR
Sbjct: 128 GLTA---GRQIQVEVLKHGFDF-DVYVGNNLIHLYGTCKKTSDAR--------------- 168
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP 225
++FDE RN +SW +++ V+ ECF EM P
Sbjct: 169 ----------------KVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCP 212
Query: 226 DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
D T+ VH VM ++ L+ N R+ +L+DMYA+ G +E AR V
Sbjct: 213 DETTMVVLLSACGGNLSLGKL--VHSQVMVRE-LELNCRLGTALVDMYAKSGGLEYARLV 269
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGL 344
F+ M+ + + +W+++IVG A G A+EAL F+ M KE P+ V++ G L ACSH GL
Sbjct: 270 FERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGL 329
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
+D+G + F++M+++ +I P + HYG +VD+ RAGRL EA D IK MP +P+ VV +LL
Sbjct: 330 VDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLL 389
Query: 405 AACRT---KGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRG 461
+AC + + G+ EKV K L+EL+P N V+++N +A W A +VRR MK+
Sbjct: 390 SACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETK 449
Query: 462 IRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGY 509
++K G S +E+ S ++F +G E SIY L+L F+L C Y
Sbjct: 450 MKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQLT-CDY 496
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 209/370 (56%), Gaps = 34/370 (9%)
Query: 135 ALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNA-- 192
++I Y K G+V SARL+FDQM R+ +SWNTM+DGY+ +EDA LF E P R+A
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHS 345
Query: 193 -----------------------------ISWTALIGGFVKKDHHKQALECFREMQLSGV 223
+SW ++I + K +K+A++ F M + G
Sbjct: 346 WNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE 405
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
PD T+ +H++V+ ++ +V V N+LI MY+RCG I +R
Sbjct: 406 KPDPHTLTSLLSASTGLVNLRLGMQMHQIVV--KTVIPDVPVHNALITMYSRCGEIMESR 463
Query: 284 QVFDGM-LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
++FD M L R +++WN++I G+A +G A EAL+ F SM+ G P +++ L AC+HA
Sbjct: 464 RIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHA 523
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGS 402
GL+DE F M V +I P++EHY LV++ S G+ EEA+ +I +MP +P++ V G+
Sbjct: 524 GLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGA 583
Query: 403 LLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
LL ACR +GLA + + L+P + YVLL N+YA +G WD A++VR M+ + I
Sbjct: 584 LLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRI 643
Query: 463 RKKPGFSSIE 472
+K+ G S ++
Sbjct: 644 KKERGSSWVD 653
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 157/360 (43%), Gaps = 49/360 (13%)
Query: 68 RSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLG--L 125
RSG + EA F ++ EA N +T T++SG + ARKL +
Sbjct: 52 RSGYIAEARDIFEKL-EAR---NTVTWNTMISGYVKRREMNQ----------ARKLFDVM 97
Query: 126 DMNDVKVGTALIDMYAKSGNV---DSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQ 182
DV +I Y G + + AR +FD+M R+ SWNTM+ GY ++ I +AL
Sbjct: 98 PKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALL 157
Query: 183 LFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXX 242
LF++ P RNA+SW+A+I GF + A+ FR+M + +P V
Sbjct: 158 LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEA 217
Query: 243 XXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM------------- 289
LV ++ L V N+LI Y + G +E AR +FD +
Sbjct: 218 AWVLGQYGSLVSGREDL---VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 290 --LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE 347
+ +VSWNS+I + G A F+ M+ + D +S+ + H +++
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMED 330
Query: 348 GLRIFNKMKRVRRIAPRIEH-YGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
+F++M R H + +V Y+ G +E A + P K + V S++AA
Sbjct: 331 AFALFSEMPN------RDAHSWNMMVSGYASVGNVELARHYFEKTPEK-HTVSWNSIIAA 383
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 115/273 (42%), Gaps = 74/273 (27%)
Query: 137 IDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWT 196
++ +SG + AR +F+++ RN V+WNTM+ GY++ E+ A +LFD P R+ ++W
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 197 ALIGGFVK---KDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
+I G+V ++A + F EM
Sbjct: 107 TMISGYVSCGGIRFLEEARKLFDEMP---------------------------------- 132
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
++DS N++I YA+ I A +F+ M R VSW+++I GF NG D A
Sbjct: 133 -SRDSFS-----WNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSA 186
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV- 372
+ F M + P AL AGLI K +R+ A + YG LV
Sbjct: 187 VVLFRKMPVKDSSP-----LCALV----AGLI--------KNERLSEAAWVLGQYGSLVS 229
Query: 373 ---DL----------YSRAGRLEEALDVIKNMP 392
DL Y + G++E A + +P
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIP 262
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N L+ +RSG I +A +F++ RN ++W +I G+VK+ QA + F M
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP----- 98
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI---EI 281
K +V N++I Y CG I E
Sbjct: 99 -----------------------------------KRDVVTWNTMISGYVSCGGIRFLEE 123
Query: 282 ARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
AR++FD M R SWN++I G+A N EAL F M E + VS++ +T
Sbjct: 124 ARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP----ERNAVSWSAMITGFCQ 179
Query: 342 AGLIDEGLRIFNKM 355
G +D + +F KM
Sbjct: 180 NGEVDSAVVLFRKM 193
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 136/353 (38%), Gaps = 99/353 (28%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
TV+W S IA + ++ EA F+RM +P+ TL +LLS ++ G
Sbjct: 374 TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST---GLVNLRLGMQ 430
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL-RNLVSWNTMLDGYMRS 174
+H K + DV V ALI MY++ G + +R +FD+M L R +++WN M+ GY
Sbjct: 431 MHQIVVKTVIP--DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFH 488
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G +AL LF M+ +G+ P ++T
Sbjct: 489 GNASEALNLFG-------------------------------SMKSNGIYPSHITFV--- 514
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML---- 290
S+++ A G ++ A+ F M+
Sbjct: 515 ---------------------------------SVLNACAHAGLVDEAKAQFVSMMSVYK 541
Query: 291 -HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGL 349
M ++S++ + G +EA+ SM FEPD + L AC
Sbjct: 542 IEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP---FEPDKTVWGALLDAC---------- 588
Query: 350 RIFNKM-------KRVRRIAPRIEH-YGCLVDLYSRAGRLEEALDVIKNMPMK 394
RI+N + + + R+ P Y L ++Y+ G +EA V NM K
Sbjct: 589 RIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESK 641
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 264 RVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKE 323
R +N ++ R G I AR +F+ + R V+WN++I G+ ++A F+ M K
Sbjct: 41 RATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR 100
Query: 324 GFEPDGVSYTGALT---ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
D V++ ++ +C ++E ++F++M + + ++ Y++ R
Sbjct: 101 ----DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFS-----WNTMISGYAKNRR 151
Query: 381 LEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
+ EAL + + MP + N V +++ GE+
Sbjct: 152 IGEALLLFEKMPER-NAVSWSAMITGFCQNGEV 183
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 230/459 (50%), Gaps = 37/459 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V++ I+ + ++ Q + F M+ + N T+LS A+ SS+ G +
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL---SSLQMGRQL 373
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H A D + + VG +L+DMYAK + A L
Sbjct: 374 HCQALLATAD-SILHVGNSLVDMYAKCEMFEEAEL------------------------- 407
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+F P R +SWTALI G+V+K H L+ F +M+ S + D T
Sbjct: 408 ------IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H ++ +L +NV + L+DMYA+CG I+ A QVF+ M R VS
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNL-ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WN++I A NG + A+ F M + G +PD VS G LTACSH G +++G F M
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+ I P+ +HY C++DL R GR EA ++ MP +P+E++ S+L ACR LA
Sbjct: 581 PIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLA 640
Query: 417 EKVMKYLVELDPGGD-SNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
E+ + L ++ D + YV +SNIYAA G+W+ V++AM++RGI+K P +S +E++
Sbjct: 641 ERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNH 700
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
I+ F + D++H I + L+ E++ GY PD S
Sbjct: 701 KIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 19/298 (6%)
Query: 105 PSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSW 164
PSP++ V A K G D + + + D+ + G V +AR V+D+M +N VS
Sbjct: 24 PSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLL-RRGQVSAARKVYDEMPHKNTVST 82
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM--QLSG 222
NTM+ G++++G++ A LFD P R ++WT L+G + + H +A + FR+M S
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 223 VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQD-SLKDNVRVSNSLIDMYARCGCIEI 281
PD+VT VH + + VSN L+ Y +++
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 282 ARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
A +F+ + + V++N++I G+ +GL E++ F M++ G +P +++G L A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV-- 260
Query: 342 AGLID-------EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP 392
GL D L + R + +I +D YS+ R+ E + MP
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQI------LDFYSKHDRVLETRMLFDEMP 312
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 157/383 (40%), Gaps = 42/383 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V + + I + + G E+ F++MR++ +P++ T +L + G
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV---GLHDFALGQQ 271
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA + G D VG ++D Y+K V R+
Sbjct: 272 LHALSVTTGFS-RDASVGNQILDFYSKHDRVLETRM------------------------ 306
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
LFDE P + +S+ +I + + D ++ +L FREMQ G
Sbjct: 307 -------LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
Query: 236 XXXXXXXXXXXXWVH--RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+H L+ T DS+ + V NSL+DMYA+C E A +F + RT
Sbjct: 360 IAANLSSLQMGRQLHCQALLATADSI---LHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
VSW ++I G+ GL L F M+ D ++ L A + + G ++
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
+ R + G LVD+Y++ G +++A+ V + MP + N V +L++A G+
Sbjct: 477 FIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDG 534
Query: 414 GLAEKVMKYLVELDPGGDSNYVL 436
A ++E DS +L
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSIL 557
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 152/367 (41%), Gaps = 40/367 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAE--VEPNNITLITLLSGCAHYPSPSSVSFGA 114
V WT + + R+ EA F +M + P+++T TLL GC ++V
Sbjct: 111 VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV---G 167
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
VHA+A KLG D N L N +L Y
Sbjct: 168 QVHAFAVKLGFDTNPF------------------------------LTVSNVLLKSYCEV 197
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
++ A LF+E P ++++++ LI G+ K + +++ F +M+ SG P T
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H L +T +D V N ++D Y++ + R +FD M
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRD-ASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
VS+N +I ++ + +L FF MQ GF+ + L+ ++ + G ++
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--H 374
Query: 355 MKRVRRIAPRIEHYG-CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
+ + A I H G LVD+Y++ EEA + K++P + V +L++ KG
Sbjct: 375 CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT-VSWTALISGYVQKGLH 433
Query: 414 GLAEKVM 420
G K+
Sbjct: 434 GAGLKLF 440
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 231/445 (51%), Gaps = 32/445 (7%)
Query: 69 SGQLVEAASTFVRMREAEVEPNNITLITLLSGC-AHYPSPSSVSFGATVHAYARKLGLDM 127
+G E + +M VE + T +L C A + + + G +HA+ + G
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS- 214
Query: 128 NDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEF 187
+ V + T L+DMYA+ G VD A VF M +RN+VSW+ M+ Y ++G+ +AL+ F E
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 188 PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXX 247
RE + S +P+ VT+
Sbjct: 275 ---------------------------MRETKDS--SPNSVTMVSVLQACASLAALEQGK 305
Query: 248 WVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAAN 307
+H ++ + L + V ++L+ MY RCG +E+ ++VFD M R +VSWNS+I + +
Sbjct: 306 LIHGYILRR-GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364
Query: 308 GLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEH 367
G +A+ F M G P V++ L ACSH GL++EG R+F M R I P+IEH
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 368 YGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELD 427
Y C+VDL RA RL+EA ++++M +P V GSLL +CR G + LAE+ + L L+
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE 484
Query: 428 PGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSH 487
P NYVLL++IYA WD +V++ ++ RG++K PG +E+ +Y FV+ D+ +
Sbjct: 485 PKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN 544
Query: 488 EENGSIYASLELLSFELQLCGYVPD 512
I+A L L+ +++ GY+P
Sbjct: 545 PLMEQIHAFLVKLAEDMKEKGYIPQ 569
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 138/332 (41%), Gaps = 49/332 (14%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
C+ G+L +A +R+ E P+ T L+ C H SS+S VH + G D
Sbjct: 57 CKEGKLKQA----IRVLSQESSPSQQTYELLILCCGHR---SSLSDALRVHRHILDNGSD 109
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDE 186
D + T LI MY+ G+VD AR ++FD+
Sbjct: 110 -QDPFLATKLIGMYSDLGSVDYAR-------------------------------KVFDK 137
Query: 187 FPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
R W AL H ++ L + +M GV D T
Sbjct: 138 TRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH 197
Query: 247 XWVHRLV---MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVG 303
+ + +T+ +V + +L+DMYAR GC++ A VF GM R +VSW+++I
Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 257
Query: 304 FAANGLADEALSFFNSMQKEGFE--PDGVSYTGALTACSHAGLIDEGLRIFNKMKR--VR 359
+A NG A EAL F M +E + P+ V+ L AC+ +++G I + R +
Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 360 RIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
I P I LV +Y R G+LE V M
Sbjct: 318 SILPVI---SALVTMYGRCGKLEVGQRVFDRM 346
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 91/152 (59%), Gaps = 10/152 (6%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRM-REA-EVEPNNITLITLLSGCAHYPSPSSVSFG 113
V+W++ IA + ++G+ EA TF M RE + PN++T++++L CA S +++ G
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACA---SLAALEQG 304
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
+H Y + GLD + + V +AL+ MY + G ++ + VFD+M R++VSWN+++ Y
Sbjct: 305 KLIHGYILRRGLD-SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363
Query: 174 SGEIEDALQLFDEFPVRNA----ISWTALIGG 201
G + A+Q+F+E A +++ +++G
Sbjct: 364 HGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 47/257 (18%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
VHR ++ S +D ++ LI MY+ G ++ AR+VFD RT+ WN++ G
Sbjct: 99 VHRHILDNGSDQDPF-LATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL----IDEGLRIFNKMKRVRRIAPR 364
+E L + M + G E D +YT L AC + + +G I + R R +
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTR-RGYSSH 216
Query: 365 IEHYGCLVDLYSRAGRLEEALDVIKNMPMK------------------------------ 394
+ LVD+Y+R G ++ A V MP++
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 395 ------PNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLS---NIYAAVG 445
PN V + S+L AC + + + + Y+ L G DS ++S +Y G
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI--LRRGLDSILPVISALVTMYGRCG 334
Query: 446 KWDGANKVRRAMKDRGI 462
K + +V M DR +
Sbjct: 335 KLEVGQRVFDRMHDRDV 351
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 249/490 (50%), Gaps = 45/490 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W I+ + + G + +A MR +++ + +TL TL+S A ++ G
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR---TENLKLGKE 396
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
V Y + + +D+ + + ++DMYAK G++ A+ VFD ++L+ WNT+L Y SG
Sbjct: 397 VQCYCIRHSFE-SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESG 455
Query: 176 EIEDALQLF--------------------------------DEF-------PVRNAISWT 196
+AL+LF D F + N ISWT
Sbjct: 456 LSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT 515
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
++ G V+ ++A+ R+MQ SG+ P+ ++ +H ++
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN 575
Query: 257 DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSF 316
V + SL+DMYA+CG I A +VF L+ + N++I +A G EA++
Sbjct: 576 LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIAL 635
Query: 317 FNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYS 376
+ S++ G +PD ++ T L+AC+HAG I++ + IF + R + P +EHYG +VDL +
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695
Query: 377 RAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL 436
AG E+AL +I+ MP KP+ ++ SL+A+C + + L + + + L+E +P NYV
Sbjct: 696 SAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVT 755
Query: 437 LSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEI--DSSIYKFVAGDKSHEENGSIY 494
+SN YA G WD K+R MK +G++KKPG S I+I + ++ FVA DK+H I
Sbjct: 756 ISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQ 815
Query: 495 ASLELLSFEL 504
L LL +++
Sbjct: 816 MMLALLLYDM 825
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 200/461 (43%), Gaps = 76/461 (16%)
Query: 31 PTFSPYNPNTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRM--REAEVE 88
P P++ ++ S H+ + ++ ++ C++G++ EA S M R +
Sbjct: 10 PNKVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIG 69
Query: 89 PNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDS 148
P +L GC + +S G +HA K G D YA++ +++
Sbjct: 70 PE--IYGEILQGCVY---ERDLSTGKQIHARILKNG-------------DFYARNEYIET 111
Query: 149 ARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHH 208
++F Y + +E A LF + VRN SW A+IG +
Sbjct: 112 KLVIF-----------------YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLC 154
Query: 209 KQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNS 268
+ AL F EM + + PD V VH V+ + L+D V V++S
Sbjct: 155 EGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVV-KSGLEDCVFVASS 213
Query: 269 LIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
L DMY +CG ++ A +VFD + R V+WN+++VG+ NG +EA+ F+ M+K+G EP
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 329 GVSYTGALTACSHAGLIDEG-----LRIFNKMKRVRRIAPRIEHYGCLVDL--------- 374
V+ + L+A ++ G ++EG + I N M+ + + ++ C V L
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333
Query: 375 ----------------YSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGL 415
Y + G +E+A+ + + M +K + V L +L++A + L
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNI---YAAVGKWDGANKV 453
++V Y + +S+ VL S + YA G A KV
Sbjct: 394 GKEVQCYCIR--HSFESDIVLASTVMDMYAKCGSIVDAKKV 432
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 226/452 (50%), Gaps = 38/452 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
++W++ IA + ++G EA F M + EPN T++ +L CA + + G
Sbjct: 229 VISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACA---AAHDLEQGRK 285
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
H A + GL+ +VKV TAL+DMY M+
Sbjct: 286 THELAIRKGLE-TEVKVSTALVDMY-------------------------------MKCF 313
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL-SGVAPDYVTVXXXX 234
E+A +F P ++ +SW ALI GF +++E F M L + PD + +
Sbjct: 314 SPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVL 373
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
H V+ + N + SL+++Y+RCG + A +VF+G+ +
Sbjct: 374 GSCSELGFLEQAKCFHSYVI-KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT 432
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDEGLRIFN 353
V W S+I G+ +G +AL FN M K +P+ V++ L+ACSHAGLI EGLRIF
Sbjct: 433 VVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
M R+AP +EHY LVDL R G L+ A+++ K MP P +LG+LL ACR
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNG 552
Query: 414 GLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEI 473
+AE V K L EL+ Y+L+SN+Y G+W+ K+R ++K RGI+K S IEI
Sbjct: 553 EMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEI 612
Query: 474 DSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
+++FVA D+ H E +Y L+ L ++
Sbjct: 613 RRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 188/442 (42%), Gaps = 79/442 (17%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W + + R Q E F M E +P+N TL L C V++G +H
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGEL---REVNYGEMIHG 84
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
+ +K +D+ VG++LI MY K G R++
Sbjct: 85 FVKKDVTLGSDLYVGSSLIYMYIKCG-----RMI-------------------------- 113
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL-SGVAPDYVTVXXXXXXX 237
+AL++FDE + ++W++++ GF K QA+E FR M + S V PD VT+
Sbjct: 114 EALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSAC 173
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
VH V+ + +++ + NSL++ YA+ + A +F + + ++SW
Sbjct: 174 TKLSNSRLGRCVHGFVIRR-GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISW 232
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
+++I + NG A EAL FN M +G EP+ + L AC+ A +++G R +++
Sbjct: 233 STVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG-RKTHELAI 291
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK----------------------- 394
+ + ++ LVD+Y + EEA V +P K
Sbjct: 292 RKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIE 351
Query: 395 ------------PNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL---LSN 439
P+ +++ +L +C G + A+ Y+++ G DSN + L
Sbjct: 352 EFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKY--GFDSNPFIGASLVE 409
Query: 440 IYAAVGKWDGANKVRR--AMKD 459
+Y+ G A+KV A+KD
Sbjct: 410 LYSRCGSLGNASKVFNGIALKD 431
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
DA Q+F E R+ W L+ ++ ++ L F M PD T+
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
+H V +L ++ V +SLI MY +CG + A ++FD + +V+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 299 SIIVGFAANGLADEALSFFNSM-QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
S++ GF NG +A+ FF M PD V+ ++AC+ G + + R
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
R + + L++ Y+++ +EA+++ K + K +V+ S + AC + AE
Sbjct: 192 -RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK--DVISWSTVIACYVQNGAA-AE 247
Query: 418 KVMKYLVELDPGGDSN 433
++ + +D G + N
Sbjct: 248 ALLVFNDMMDDGTEPN 263
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 244/461 (52%), Gaps = 45/461 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
TV+W S I+ + +G +A F +M E EP+ TL+++L C+H +
Sbjct: 198 TVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEE 257
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+ A +K+GL +G+ LI MY K G++DSAR V
Sbjct: 258 M-AITKKIGLS---TFLGSKLISMYGKCGDLDSARRV----------------------- 290
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
F++ ++ ++WTA+I + + +A + F EM+ +GV+PD T+
Sbjct: 291 --------FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS 342
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+ ++ SL+ N+ V+ L+DMY +CG +E A +VF+ M +
Sbjct: 343 ACGSVGALELGKQIETHA-SELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA 401
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+WN++I +A G A EAL F+ M P +++ G L+AC HAGL+ +G R F++M
Sbjct: 402 TWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEM 458
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
+ + P+IEHY ++DL SRAG L+EA + ++ P KP+E++L ++L AC + ++ +
Sbjct: 459 SSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAI 518
Query: 416 AEKVMKYLVELDPGGDS-NYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
EK M+ L+E+ ++ NYV+ SN+ A + WD + K+R M+DRG+ K PG S IEI+
Sbjct: 519 REKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIE 578
Query: 475 SSIYKFVAGDK----SHEENGSIYASL-ELLSFELQLCGYV 510
+ +F+AG E++GS++ L E + E GY+
Sbjct: 579 GELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERYEFGYI 619
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 157/356 (44%), Gaps = 53/356 (14%)
Query: 139 MYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTAL 198
+ K +V+ R + QM L ++ N ++ + G+ + LF N S+ +
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYM 102
Query: 199 IGGFVKK-DHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQD 257
I G + H+ AL +R M+ SG+ PD T VH + +
Sbjct: 103 IRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS-SLFKV 161
Query: 258 SLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFF 317
L+ +V +++SLI MYA+CG + AR++FD + R VSWNS+I G++ G A +A+ F
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLF 221
Query: 318 NSMQKEGFEPDGVSYTGALTACSH-----------------------------------A 342
M++EGFEPD + L ACSH
Sbjct: 222 RKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKC 281
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVV 399
G +D R+FN+M + R+A + ++ +YS+ G+ EA + M + P+
Sbjct: 282 GDLDSARRVFNQMIKKDRVA-----WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 400 LGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRR 455
L ++L+AC + G + L +++ + EL L NIY A G D K R
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELS--------LQHNIYVATGLVDMYGKCGR 384
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 217/412 (52%), Gaps = 36/412 (8%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W + + + R ++A ++ M + V P+ +L ++ + G +H+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQI---HDFTLGKELHS 141
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
A +LG VG D + +SG + Y ++GE E
Sbjct: 142 VAVRLGF------VG----DEFCESG----------------------FITLYCKAGEFE 169
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
+A ++FDE P R SW A+IGG +A+E F +M+ SG+ PD T+
Sbjct: 170 NARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG 229
Query: 239 XXXXXXXXXWVHRLVM-TQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H+ V+ + K ++ + NSLIDMY +CG +++A +F+ M R +VSW
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSW 289
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
+S+IVG+AANG EAL F M++ G P+ +++ G L+AC H GL++EG F MK
Sbjct: 290 SSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKS 349
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
+ P + HYGC+VDL SR G+L+EA V++ MPMKPN +V G L+ C G++ +AE
Sbjct: 350 EFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
V Y+VEL+P D YV+L+N+YA G W +VR+ MK + + K P +S
Sbjct: 410 WVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 36/248 (14%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
+W + I +G+ EA FV M+ + +EP++ T++++ + C +S +H
Sbjct: 185 SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG---GLGDLSLAFQLH 241
Query: 118 AYARKLGL-DMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
+ + +D+ + +LIDMY K G +D A +F++M RN+VSW++M+ GY +G
Sbjct: 242 KCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGN 301
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+A LECFR+M+ GV P+ +T
Sbjct: 302 TLEA-------------------------------LECFRQMREFGVRPNKITFVGVLSA 330
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-LHRTMV 295
++ ++ L+ + ++D+ +R G ++ A++V + M + ++
Sbjct: 331 CVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVM 390
Query: 296 SWNSIIVG 303
W ++ G
Sbjct: 391 VWGCLMGG 398
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W+S I + +G +EA F +MRE V PN IT + +LS C H V G T
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVH---GGLVEEGKT 342
Query: 116 VHAYAR-KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR-NLVSWNTMLDGYMR 173
A + + L+ G ++D+ ++ G + A+ V ++M ++ N++ W ++ G +
Sbjct: 343 YFAMMKSEFELEPGLSHYG-CIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
Query: 174 SGEIEDA 180
G++E A
Sbjct: 402 FGDVEMA 408
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 213/420 (50%), Gaps = 78/420 (18%)
Query: 71 QLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS-FGATVHAYARKLGLDM-- 127
Q++ + S FVR PN T YPS S F A H + R L +
Sbjct: 99 QILSSRSNFVR-------PNEFT----------YPSLFKASGFDAQWHRHGRALHAHVLK 141
Query: 128 ------NDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI---E 178
+D V AL+ YA G + AR +F+++ +L +WNT+L Y S EI E
Sbjct: 142 FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDE 201
Query: 179 DALQLFDEFPVR-NAISWTALI------GGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
+ L LF VR N +S ALI G FV+ GV
Sbjct: 202 EVLLLFMRMQVRPNELSLVALIKSCANLGEFVR-----------------GV-------- 236
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
W H V+ +++L N V SLID+Y++CGC+ AR+VFD M
Sbjct: 237 ----------------WAHVYVL-KNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ 279
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
R + +N++I G A +G E + + S+ +G PD ++ ++ACSH+GL+DEGL+I
Sbjct: 280 RDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQI 339
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
FN MK V I P++EHYGCLVDL R+GRLEEA + IK MP+KPN + S L + +T G
Sbjct: 340 FNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Query: 412 EIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+ E +K+L+ L+ NYVLLSNIYA V +W K R MKD + K PG S++
Sbjct: 400 DFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 54 DPTVA-WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
+P +A W + +A + S ++ + +V PN ++L+ L+ CA+
Sbjct: 178 EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANL---GEFVR 234
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G H Y K L +N VGT+LID+Y+K G + AR VFD+M R++ +N M+ G
Sbjct: 235 GVWAHVYVLKNNLTLNQF-VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLA 293
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHK----QALECFREMQ-LSGVAP 225
G ++ ++L+ + + +A + H + L+ F M+ + G+ P
Sbjct: 294 VHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEP 351
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 217/422 (51%), Gaps = 44/422 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRM----REAEVEPNNITLITLLSGCAHYPSPSSVSF 112
V W++ I + + + EA F +M A V P I LI L GCA + +S
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLI--LMGCARF---GDLSG 326
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G VH YA K G + +L NT++ Y
Sbjct: 327 GRCVHCYAVKAGF--------------------------------ILDLTVQNTIISFYA 354
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
+ G + DA + F E +++ IS+ +LI G V +++ F EM+ SG+ PD T+
Sbjct: 355 KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
H + N + N+L+DMY +CG +++A++VFD M R
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVH-GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKR 473
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+VSWN+++ GF +GL EALS FNSMQ+ G PD V+ L+ACSH+GL+DEG ++F
Sbjct: 474 DIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLF 533
Query: 353 NKMKRVR-RIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
N M R + PRI+HY C+ DL +RAG L+EA D + MP +P+ VLG+LL+AC T
Sbjct: 534 NSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYK 593
Query: 412 EIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
L +V K + L +S VLLSN Y+A +W+ A ++R K RG+ K PG+S +
Sbjct: 594 NAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Query: 472 EI 473
++
Sbjct: 653 DV 654
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 11/280 (3%)
Query: 135 ALIDMYAKSGNVDSARLVFDQMGLRNL-VSWNTMLDG----YMRSGEIEDALQLFDEFP- 188
+L++ +S N+ +++ + R+L +S +T+L Y E+E A +FDE P
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 189 -VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXX 247
N I+W +I + D ++AL+ + +M SGV P T
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 248 WVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAAN 307
+H V D D + V +L+D YA+CG +E+A +VFD M R MV+WN++I GF+ +
Sbjct: 124 LIHSHVNCSDFATD-MYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 308 GLADEALSFFNSMQK-EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIE 366
+ + F M++ +G P+ + G A AG + EG + R+ +
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 367 HYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
G ++D+Y+++ + A V ++ K NEV +++
Sbjct: 243 KTG-ILDVYAKSKCIIYARRVF-DLDFKKNEVTWSAMIGG 280
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 168/448 (37%), Gaps = 83/448 (18%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
+AW I + + +A + +M + V P T +L CA ++ G +
Sbjct: 69 IAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACA---GLRAIDDGKLI 125
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H++ D+ V TAL+D YAK G E
Sbjct: 126 HSHVNCSDF-ATDMYVCTALVDFYAKCG-------------------------------E 153
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ-LSGVAPDYVTVXXXXX 235
+E A+++FDE P R+ ++W A+I GF + F +M+ + G++P+ T+
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH T+ +++ V ++D+YA+ CI AR+VFD + V
Sbjct: 214 ALGRAGALREGKAVHGYC-TRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEV 272
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQ---------------------------------- 321
+W+++I G+ N + EA F M
Sbjct: 273 TWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHC 332
Query: 322 ---KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
K GF D ++ + G + + R F+++ I+ GC+V+
Sbjct: 333 YAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNC---- 388
Query: 379 GRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV 435
R EE+ + M ++P+ L +L AC +G Y V +++
Sbjct: 389 -RPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSIC 447
Query: 436 -LLSNIYAAVGKWDGANKVRRAMKDRGI 462
L ++Y GK D A +V M R I
Sbjct: 448 NALMDMYTKCGKLDVAKRVFDTMHKRDI 475
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 192/318 (60%), Gaps = 3/318 (0%)
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
Y SGE+E+A ++F+E P RN +SWTA+I GF ++ L+ + +M+ S P+ T
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
VH + LK + +SNSLI MY +CG ++ A ++FD
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHM-GLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS 283
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQ-KEGFEPDGVSYTGALTACSHAGLIDEGL 349
++ +VSWNS+I G+A +GLA +A+ F M K G +PD ++Y G L++C HAGL+ EG
Sbjct: 284 NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR 343
Query: 350 RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRT 409
+ FN M + P + HY CLVDL R G L+EAL++I+NMPMKPN V+ GSLL +CR
Sbjct: 344 KFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRV 402
Query: 410 KGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
G++ + + + L+P + +V L+N+YA+VG W A VR+ MKD+G++ PG S
Sbjct: 403 HGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCS 462
Query: 470 SIEIDSSIYKFVAGDKSH 487
IEI++ ++ F A D S+
Sbjct: 463 WIEINNYVFMFKAEDGSN 480
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 36/254 (14%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT+ I+ + ++ + +MR++ +PN+ T LLS C ++ G +
Sbjct: 186 VVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT---GSGALGQGRS 242
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH +GL + + + +LI MY K G++ A +FDQ +++VSWN+M+ GY + G
Sbjct: 243 VHCQTLHMGLK-SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG 301
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
A++LF+ M SG PD +T
Sbjct: 302 LAMQAIELFELM------------------------------MPKSGTKPDAITYLGVLS 331
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-LHRTM 294
L M + LK + + L+D+ R G ++ A ++ + M +
Sbjct: 332 SCRHAGLVKEGRKFFNL-MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 295 VSWNSIIVGFAANG 308
V W S++ +G
Sbjct: 391 VIWGSLLFSCRVHG 404
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
+V + +SL+ +Y G +E A +VF+ M R +VSW ++I GFA D L ++ M+
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL 381
K +P+ ++T L+AC+ +G + +G + + + + + L+ +Y + G L
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHM-GLKSYLHISNSLISMYCKCGDL 272
Query: 382 EEALDVIKNMPMK 394
++A + K
Sbjct: 273 KDAFRIFDQFSNK 285
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 199/354 (56%), Gaps = 5/354 (1%)
Query: 122 KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDAL 181
KLG + + V V TAL+ MY GN+ A VFD+M RN V+WN M+ G G+ E AL
Sbjct: 151 KLGFE-SHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKAL 209
Query: 182 QLFDEFPVRNAISWTALIGGFVKKDHHKQALECF-REMQLSGVAPDYVTVXXXXXXXXXX 240
++ P R +SWT +I G+ + D K+A+ F R + + P+ +T+
Sbjct: 210 CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 269
Query: 241 XXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH--RTMVSWN 298
VH V + + ++RV+NSLID YA+CGCI+ A + F + + + +VSW
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG-LRIFNKMKR 357
++I FA +G+ EA+S F M++ G +P+ V+ L ACSH GL +E L FN M
Sbjct: 330 TMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVN 389
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
+I P ++HYGCLVD+ R GRLEEA + +P++ VV LL AC + LAE
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 449
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+V + L+EL+ +YVL+SNI+ G++ A + R+ M RG+ K PG S +
Sbjct: 450 RVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 195/350 (55%), Gaps = 1/350 (0%)
Query: 162 VSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS 221
V W++++D Y + G I++A +FD+ ++ +SWT++I + K ++ F E+ S
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 222 GVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEI 281
P+ T VH MT+ S+SL+DMY +CG IE
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGY-MTRVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 282 ARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
A+ V DG +VSW S+I G A NG DEAL +F+ + K G +PD V++ L+AC+H
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 342 AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLG 401
AGL+++GL F + R++ +HY CLVDL +R+GR E+ VI MPMKP++ +
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 402 SLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRG 461
S+L C T G I LAE+ + L +++P YV ++NIYAA GKW+ K+R+ M++ G
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Query: 462 IRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP 511
+ K+PG S EI + F+A D SH I L L +++ GYVP
Sbjct: 553 VTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVP 602
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 195/406 (48%), Gaps = 25/406 (6%)
Query: 49 NTKHTDPTVAWTSSIAHHCRSGQLVEAASTFV---RMREA------EVEPNNITLITLLS 99
N H D V + CR+ + EA +REA +P T L+
Sbjct: 38 NPNHEDGGVV----VERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQ 93
Query: 100 GCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR 159
C+ ++ G VH + R G + + + L+ MYAK G++ AR VFD+M R
Sbjct: 94 VCSQ---TRALEEGKKVHEHIRTSGF-VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR 149
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
+L SWN M++GY G +E+A +LFDE +++ SWTA++ G+VKKD ++AL + MQ
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
Query: 220 -LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGC 278
+ P+ TV +H ++ D V + +SL+DMY +CGC
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV-LWSSLMDMYGKCGC 268
Query: 279 IEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTA 338
I+ AR +FD ++ + +VSW S+I + + E S F+ + P+ ++ G L A
Sbjct: 269 IDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNA 328
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEV 398
C+ + G ++ M RV P LVD+Y++ G +E A V+ P KP+ V
Sbjct: 329 CADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLV 386
Query: 399 VLGSLLAACRTKGEIGLAEKVMKYL-VELDPGGDSNYVLLSNIYAA 443
SL+ C G+ ++ +KY + L G ++V N+ +A
Sbjct: 387 SWTSLIGGCAQNGQ---PDEALKYFDLLLKSGTKPDHVTFVNVLSA 429
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 224/437 (51%), Gaps = 40/437 (9%)
Query: 79 FVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALID 138
+ RM + V P+N T +++ CA S++ G VH +A G + D V AL+
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCA---DLSALRIGKGVHCHAVVSGFGL-DTYVQAALVT 150
Query: 139 MYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTAL 198
Y+K G+++ AR Q+FD P ++ ++W +L
Sbjct: 151 FYSKCGDMEGAR-------------------------------QVFDRMPEKSIVAWNSL 179
Query: 199 IGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDS 258
+ GF + +A++ F +M+ SG PD T WVH+ ++++
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-G 238
Query: 259 LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFN 318
L NV++ +LI++Y+RCG + AR+VFD M + +W ++I + +G +A+ FN
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 319 SMQKE-GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSR 377
M+ + G P+ V++ L+AC+HAGL++EG ++ +M + R+ P +EH+ C+VD+ R
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGR 358
Query: 378 AGRLEEALDVIKNMPMKPNEV---VLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNY 434
AG L+EA I + + ++L AC+ L ++ K L+ L+P ++
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHH 418
Query: 435 VLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIY 494
V+LSNIYA GK D + +R M +RK+ G+S IE+++ Y F GD+SH+E G IY
Sbjct: 419 VMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIY 478
Query: 495 ASLELLSFELQLCGYVP 511
LE L + GY P
Sbjct: 479 RYLETLISRCKEIGYAP 495
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 9/148 (6%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
VAW S ++ ++G EA F +MRE+ EP++ T ++LLS CA +VS G+ V
Sbjct: 174 VAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ---TGAVSLGSWV 230
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H Y GLD+N VK+GTALI++Y++ G+V AR VFD+M N+ +W M+ Y G
Sbjct: 231 HQYIISEGLDLN-VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY 289
Query: 177 IEDALQLFDEF-----PVRNAISWTALI 199
+ A++LF++ P+ N +++ A++
Sbjct: 290 GQQAVELFNKMEDDCGPIPNNVTFVAVL 317
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 219/422 (51%), Gaps = 37/422 (8%)
Query: 75 AASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGT 134
A + F M V P+ + +L CA + G +H K GL + DV V
Sbjct: 124 ALTVFREMLLGPVFPDKYSFTFVLKACAAF---CGFEEGRQIHGLFIKSGL-VTDVFVEN 179
Query: 135 ALIDMYAKSGN-------------------------------VDSARLVFDQMGLRNLVS 163
L+++Y +SG VD AR +FD+M RN+ S
Sbjct: 180 TLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVES 239
Query: 164 WNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSG 222
WN M+ GY +G +++A ++FD PVR+ +SW A++ + + + LE F +M S
Sbjct: 240 WNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 223 VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIA 282
PD T+ WVH + + + ++ ++ +L+DMY++CG I+ A
Sbjct: 300 EKPDGFTLVSVLSACASLGSLSQGEWVH-VYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
+VF R + +WNSII + +GL +AL F+ M EGF+P+G+++ G L+AC+H
Sbjct: 359 LEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGS 402
G++D+ ++F M V R+ P IEHYGC+VDL R G++EEA +++ +P ++L S
Sbjct: 419 GMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLES 478
Query: 403 LLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
LL AC+ G++ AE++ L+EL+ S Y +SN+YA+ G+W+ RR M+ +
Sbjct: 479 LLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERV 538
Query: 463 RK 464
+
Sbjct: 539 NR 540
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 21/280 (7%)
Query: 191 NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVH 250
N + ++I + + AL FREM L V PD + +H
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 251 RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLA 310
L + + L +V V N+L+++Y R G EIAR+V D M R VSWNS++ + GL
Sbjct: 164 GLFI-KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 311 DEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGC 370
DEA + F+ M++ E S+ ++ + AGL+ E +F+ M VR + +
Sbjct: 223 DEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMP-VRDVVS----WNA 273
Query: 371 LVDLYSRAGRLEEALDVIKNM----PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL--- 423
+V Y+ G E L+V M KP+ L S+L+AC + G + E V Y+
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 424 -VELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
+E++ + V ++Y+ GK D A +V RA R +
Sbjct: 334 GIEIEGFLATALV---DMYSKCGKIDKALEVFRATSKRDV 370
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVE-PNNITLITLLSGCAHYPSPSSVSFGA 114
V+W + + + G E F +M + E P+ TL+++LS CA S S+S G
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACA---SLGSLSQGE 324
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
VH Y K G+++ + TAL+DMY+K G +D A VF R++ +WN+++
Sbjct: 325 WVHVYIDKHGIEIEGF-LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVH 383
Query: 175 GEIEDALQLFDE 186
G +DAL++F E
Sbjct: 384 GLGKDALEIFSE 395
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/450 (32%), Positives = 233/450 (51%), Gaps = 35/450 (7%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
++W S IA + A F++M+ VE + T LLS C+ FG ++
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS---GEEHQIFGKSL 327
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H K GL+ ALI MY + +G
Sbjct: 328 HGMVIKKGLE-QVTSATNALISMYIQ-----------------------------FPTGT 357
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+EDAL LF+ ++ ISW ++I GF +K + A++ F ++ S + D
Sbjct: 358 MEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRS 417
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR-TMV 295
+H L T+ N V +SLI MY++CG IE AR+ F + + + V
Sbjct: 418 CSDLATLQLGQQIHALA-TKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTV 476
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+WN++I+G+A +GL +L F+ M + + D V++T LTACSH GLI EGL + N M
Sbjct: 477 AWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLM 536
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
+ V +I PR+EHY VDL RAG + +A ++I++MP+ P+ +VL + L CR GEI +
Sbjct: 537 EPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEM 596
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
A +V +L+E++P YV LS++Y+ + KW+ V++ MK+RG++K PG+S IEI +
Sbjct: 597 ATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRN 656
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQ 505
+ F A D+S+ IY ++ L+ E+Q
Sbjct: 657 QVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 164/376 (43%), Gaps = 50/376 (13%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V+W + I+ + G+L +A F M+ + + + + LL G A S G
Sbjct: 66 SVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIA---SVKRFDLGEQ 122
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH K G + N V VG++L+DMYAK V
Sbjct: 123 VHGLVIKGGYECN-VYVGSSLVDMYAKCERV----------------------------- 152
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL-SGVAPDYVTVXXXX 234
EDA + F E N++SW ALI GFV+ K A M++ + V D T
Sbjct: 153 --EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML-HRT 293
VH V+ + L+ + + N++I YA CG + A++VFDG+ +
Sbjct: 211 TLLDDPMFCNLLKQVHAKVL-KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKD 269
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
++SWNS+I GF+ + L + A F MQ+ E D +YTG L+ACS E +IF
Sbjct: 270 LISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS-----GEEHQIFG 324
Query: 354 KMKRVRRIAPRIEHY----GCLVDLYSR--AGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
K I +E L+ +Y + G +E+AL + +++ K + + S++
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK-DLISWNSIITGF 383
Query: 408 RTKGEIGLAEKVMKYL 423
KG A K YL
Sbjct: 384 AQKGLSEDAVKFFSYL 399
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H YA K G ++D+ V ++D Y K G + A ++FD+M R+ VSWNTM+ GY G+
Sbjct: 23 HCYAIKCG-SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+EDA LF C M+ SG D +
Sbjct: 82 LEDAWCLF----------------------------TC---MKRSGSDVDGYSFSRLLKG 110
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
VH LV+ + + NV V +SL+DMYA+C +E A + F + VS
Sbjct: 111 IASVKRFDLGEQVHGLVI-KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 297 WNSIIVGF 304
WN++I GF
Sbjct: 170 WNALIAGF 177
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
++ VSN ++D Y + G + A +FD M R VSWN++I G+ + G ++A F M+
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGC-------LVDL 374
+ G + DG S++ L + D G ++ + + Y C LVD+
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK--------GGYECNVYVGSSLVDM 145
Query: 375 YSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI-------GLAEKVMKYLVELD 427
Y++ R+E+A + K + +PN V +L+A +I GL E MK V +D
Sbjct: 146 YAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTAFWLLGLME--MKAAVTMD 202
Query: 428 PG 429
G
Sbjct: 203 AG 204
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 43 SFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCA 102
+ SL + K D ++W S I + G +A F +R +E++ ++ LL C+
Sbjct: 361 ALSLFESLKSKD-LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
Query: 103 HYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRN-L 161
+++ G +HA A K G N+ + ++LI MY+K G ++SAR F Q+ ++
Sbjct: 420 DL---ATLQLGQQIHALATKSGFVSNEFVI-SSLIVMYSKCGIIESARKCFQQISSKHST 475
Query: 162 VSWNTMLDGYMRSGEIEDALQLFDEFPVRNA----ISWTALIGGFVKKDHHKQALECFRE 217
V+WN M+ GY + G + +L LF + +N +++TA++ ++ LE
Sbjct: 476 VAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 535
Query: 218 MQ 219
M+
Sbjct: 536 ME 537
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 225/416 (54%), Gaps = 8/416 (1%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITL-LSGCAHYPSPSSVSFGAT 115
++ T ++ + G +A + F++M + P + + +L L CA P G +
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPV---LGGS 69
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VHA++ K N VG AL+DMY K +V AR +FD++ RN V WN M+ Y G
Sbjct: 70 VHAHSVKSNFLSNPF-VGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 176 EIEDALQLFDEFPVR-NAISWTALIGGFV-KKDHHKQALECFREMQLSGVAPDYVTVXXX 233
++++A++L++ V N S+ A+I G V +D +A+E +R+M P+ +T+
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLAL 188
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+H ++ ++ + ++ + L++ Y RCG I + VFD M R
Sbjct: 189 VSACSAIGAFRLIKEIHSYAF-RNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+V+W+S+I +A +G A+ AL F M+ PD +++ L ACSHAGL DE L F
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
+M+ + +HY CLVD+ SR GR EEA VI+ MP KP G+LL ACR GEI
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 414 GLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
LAE + L+ ++P +NYVLL IY +VG+ + A ++R MK+ G++ PG S
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 253/489 (51%), Gaps = 44/489 (8%)
Query: 29 ANPTFSPYNPNTNQSFSLRHNTKHTDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAEV 87
AN + Y + S++ R TV +W + I H +S + ++M+ + +
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492
Query: 88 EPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVD 147
P++ T+ +LLS C+ S + G VH + + L+
Sbjct: 493 LPDSFTVCSLLSACSKLKS---LRLGKEVHGFIIRNWLE--------------------- 528
Query: 148 SARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDH 207
R+L + ++L Y+ GE+ LFD ++ +SW +I G+++
Sbjct: 529 -----------RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 577
Query: 208 HKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSN 267
+AL FR+M L G+ +++ H + + L+D+ ++
Sbjct: 578 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL-KHLLEDDAFIAC 636
Query: 268 SLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEP 327
SLIDMYA+ G I + +VF+G+ ++ SWN++I+G+ +GLA EA+ F MQ+ G P
Sbjct: 637 SLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 696
Query: 328 DGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDV 387
D +++ G LTAC+H+GLI EGLR ++MK + P ++HY C++D+ RAG+L++AL V
Sbjct: 697 DDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 756
Query: 388 I-KNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGK 446
+ + M + + + SLL++CR + + EKV L EL+P NYVLLSN+YA +GK
Sbjct: 757 VAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGK 816
Query: 447 WDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDK---SHEENGSIYASLELLSFE 503
W+ KVR+ M + +RK G S IE++ ++ FV G++ EE S+++ LE+ +
Sbjct: 817 WEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEM---K 873
Query: 504 LQLCGYVPD 512
+ GY PD
Sbjct: 874 ISKMGYRPD 882
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 118/294 (40%), Gaps = 43/294 (14%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
W + I+ + R+ E TF+ M ++ P++ T ++ CA S V G VH
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA---GMSDVGIGLAVH 210
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
K GL + DV VG AL+ Y G V
Sbjct: 211 GLVVKTGL-VEDVFVGNALVSFYGTHGFV------------------------------- 238
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS----GVAPDYVTVXXX 233
DALQLFD P RN +SW ++I F +++ EM PD T+
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
VH + + L + ++N+L+DMY++CGCI A+ +F ++
Sbjct: 299 LPVCAREREIGLGKGVHGWAV-KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEG--FEPDGVSYTGALTACSHAGLI 345
+VSWN+++ GF+A G M G + D V+ A+ C H +
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 126/308 (40%), Gaps = 39/308 (12%)
Query: 110 VSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLD 169
+ G +H ND + T +I MYA G+ D +R VFD +
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL------------- 146
Query: 170 GYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYV 228
RS +N W A+I + + + + + LE F EM + + PD+
Sbjct: 147 ---RS---------------KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 188
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T VH LV+ + L ++V V N+L+ Y G + A Q+FD
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVV-KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDI 247
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKE----GFEPDGVSYTGALTACSHAGL 344
M R +VSWNS+I F+ NG ++E+ M +E F PD + L C+
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
I G + ++ R+ + L+D+YS+ G + A + K M N V +++
Sbjct: 308 IGLGKGVHGWAVKL-RLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMV 365
Query: 405 AACRTKGE 412
+G+
Sbjct: 366 GGFSAEGD 373
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 119/290 (41%), Gaps = 42/290 (14%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVE----PNNITLITLLSGCAHYPSPSSVSF 112
V+W S I +G E+ M E + P+ TL+T+L CA +
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR---EREIGL 310
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G VH +A KL LD + LV N ++D Y
Sbjct: 311 GKGVHGWAVKLRLD--------------------------------KELVLNNALMDMYS 338
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG--VAPDYVTV 230
+ G I +A +F +N +SW ++GGF + + R+M G V D VT+
Sbjct: 339 KCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI 398
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H + Q+ + + + V+N+ + YA+CG + A++VF G+
Sbjct: 399 LNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANAFVASYAKCGSLSYAQRVFHGIR 457
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
+T+ SWN++I G A + +L M+ G PD + L+ACS
Sbjct: 458 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
+H+LV L+++ + +I MYA CG + +R VFD + + + WN++I ++ N
Sbjct: 106 IHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNE 165
Query: 309 LADEAL-SFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRR-IAPRIE 366
L DE L +F + PD +Y + AC AG+ D G+ + V+ + +
Sbjct: 166 LYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVGIGLAVHGLVVKTGLVEDVF 223
Query: 367 HYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE- 425
LV Y G + +AL + MP + N V S++ R + G +E+ L E
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPER-NLVSWNSMI---RVFSDNGFSEESFLLLGEM 279
Query: 426 LDPGGDSNYV 435
++ GD ++
Sbjct: 280 MEENGDGAFM 289
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 222/457 (48%), Gaps = 38/457 (8%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W + I++ G+ EA F+ R + PN+IT L+ C+ + ++ G +H
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW---LHLNLGMQLHG 233
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
+ G D DV V LID Y K + RS EI
Sbjct: 234 LVLRSGFD-TDVSVCNGLIDFYGKCKQI--------------------------RSSEI- 265
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
+F E +NA+SW +L+ +V+ ++A + + V +
Sbjct: 266 ----IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
+H + + ++ + V ++L+DMY +CGCIE + Q FD M + +V+ N
Sbjct: 322 GMAGLELGRSIHAHAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGF--EPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
S+I G+A G D AL+ F M G P+ +++ L+ACS AG ++ G++IF+ M+
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
I P EHY C+VD+ RAG +E A + IK MP++P V G+L ACR G+ L
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 500
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
+ L +LDP N+VLLSN +AA G+W AN VR +K GI+K G+S I + +
Sbjct: 501 LLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQ 560
Query: 477 IYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDF 513
++ F A D+SH N I +L L E++ GY PD
Sbjct: 561 VHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDL 597
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 164/404 (40%), Gaps = 43/404 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WTS I+ ++G A F MR V PN+ T A P + G
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT---GKQ 129
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA A K G + DV VG + DMY K+ D AR +FD++ RNL +WN + + G
Sbjct: 130 IHALAVKCGRIL-DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+A++ F EF + D H P+ +T
Sbjct: 189 RPREAIEAFIEFR---------------RIDGH----------------PNSITFCAFLN 217
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H LV+ + +V V N LID Y +C I + +F M + V
Sbjct: 218 ACSDWLHLNLGMQLHGLVL-RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 276
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SW S++ + N ++A + +K+ E + L+AC+ ++ G I
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI--HA 334
Query: 356 KRVRRIAPRIEHYG-CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
V+ R G LVD+Y + G +E++ MP K N V SL+ +G++
Sbjct: 335 HAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVD 393
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMK 458
+A + + + G NY+ ++ +A + A V MK
Sbjct: 394 MALALFEEMAPRGCGPTPNYMTFVSLLSACSR---AGAVENGMK 434
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 120/301 (39%), Gaps = 34/301 (11%)
Query: 106 SPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWN 165
S SS+ G VHA K + LI+MY+K + +SARLV
Sbjct: 18 SASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT--------- 68
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP 225
P RN +SWT+LI G + H AL F EM+ GV P
Sbjct: 69 ----------------------PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP 106
Query: 226 DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
+ T +H L + + D V V S DMY + + AR++
Sbjct: 107 NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD-VFVGCSAFDMYCKTRLRDDARKL 165
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
FD + R + +WN+ I +G EA+ F ++ P+ +++ L ACS +
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 346 DEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLA 405
+ G+++ + R + L+D Y + ++ + + M K N V SL+A
Sbjct: 226 NLGMQLHGLVLR-SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVA 283
Query: 406 A 406
A
Sbjct: 284 A 284
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 232/455 (50%), Gaps = 36/455 (7%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + I + R+ EA F+ MR + + T+ ++LS C +
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK---KL 184
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + K +D+N + VGTAL+D+YAK G
Sbjct: 185 HCLSVKTCIDLN-LYVGTALLDLYAKC-------------------------------GM 212
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
I+DA+Q+F+ +++++W++++ G+V+ ++++AL +R Q + + T+
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 272
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H V+ + NV V++S +DMYA+CG + + +F + + +
Sbjct: 273 CSNLAALIEGKQMHA-VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WN+II GFA + E + F MQ++G P+ V+++ L+ C H GL++EG R F M+
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
++P + HY C+VD+ RAG L EA ++IK++P P + GSLLA+CR + LA
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELA 451
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
E + L EL+P N+VLLSNIYAA +W+ K R+ ++D ++K G S I+I
Sbjct: 452 EVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDK 511
Query: 477 IYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP 511
++ F G+ H I ++L+ L + + GY P
Sbjct: 512 VHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 141/317 (44%), Gaps = 39/317 (12%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N +++ Y + G +E A Q+FD R+ +SW +IG + + +AL+ F EM+ G
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
T+ +H L + + + N+ V +L+D+YA+CG I+ A Q
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSV-KTCIDLNLYVGTALLDLYAKCGMIKDAVQ 218
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
VF+ M ++ V+W+S++ G+ N +EAL + Q+ E + + + + ACS+
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
Query: 345 IDEG----------------------LRIFNKMKRVRRI--------APRIEHYGCLVDL 374
+ EG + ++ K +R +E + ++
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 375 YSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAACRTKGEIGLAEKVMKY--LVELDPG 429
+++ R +E + + + M M PNEV SLL+ C G GL E+ ++ L+ G
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC---GHTGLVEEGRRFFKLMRTTYG 395
Query: 430 GDSNYVLLSNIYAAVGK 446
N V S + +G+
Sbjct: 396 LSPNVVHYSCMVDILGR 412
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 6/150 (4%)
Query: 259 LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFN 318
L+ +V + N LI+ Y++CG +E+ARQVFDGML R++VSWN++I + N + EAL F
Sbjct: 92 LEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFL 151
Query: 319 SMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY--GCLVDLYS 376
M+ EGF+ + + L+AC G+ + L + + Y L+DLY+
Sbjct: 152 EMRNEGFKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYA 208
Query: 377 RAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
+ G +++A+ V ++M K + V S++A
Sbjct: 209 KCGMIKDAVQVFESMQDKSS-VTWSSMVAG 237
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V W+S +A + ++ EA + R + +E N TL +++ C++ +++ G
Sbjct: 228 SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL---AALIEGKQ 284
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA K G N V V ++ +DMYAK G++ + ++F ++ +NL WNT++
Sbjct: 285 MHAVICKSGFGSN-VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTII------- 336
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
GF K K+ + F +MQ G+ P+ VT
Sbjct: 337 ------------------------SGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-LHRTM 294
+L+ T L NV + ++D+ R G + A ++ + T
Sbjct: 373 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA 432
Query: 295 VSWNSII 301
W S++
Sbjct: 433 SIWGSLL 439
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 201/349 (57%), Gaps = 5/349 (1%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSGV 223
N +++ M+ GE A ++ +N I+W +IGG+V+ +++AL+ + M + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
P+ + WVH L M ++ N +S++L+D+YA+CG I +R
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSL-MIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 284 QVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
+VF + + WN++I GFA +GLA EA+ F+ M+ E PD +++ G LT CSH G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSL 403
L++EG F M R I P++EHYG +VDL RAGR++EA ++I++MP++P+ V+ SL
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 404 LAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
L++ RT L E ++ L + G +YVLLSNIY++ KW+ A KVR M GIR
Sbjct: 341 LSSSRTYKNPELGEIAIQNLSKAKSG---DYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 464 KKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
K G S +E I++F AGD SH E +IY LE L + + G+V D
Sbjct: 398 KAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSD 446
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMRE-AEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
+ W I + R+ Q EA M +++PN + + L+ CA +
Sbjct: 129 VITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL---GDLHHAK 185
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
VH+ G+++N + + +AL+D+YAK G++ ++R VF + ++ WN M+ G+
Sbjct: 186 WVHSLMIDSGIELNAI-LSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATH 244
Query: 175 GEIEDALQLFDEF 187
G +A+++F E
Sbjct: 245 GLATEAIRVFSEM 257
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 223/443 (50%), Gaps = 37/443 (8%)
Query: 74 EAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVG 133
EA + M + EP+N T LL C S+ G +H KLGL+ DV V
Sbjct: 115 EALCFYNEMMQRGNEPDNFTYPCLLKACTRL---KSIREGKQIHGQVFKLGLEA-DVFVQ 170
Query: 134 TALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAI 193
+LI+MY R GE+E + +F++ + A
Sbjct: 171 NSLINMYG-------------------------------RCGEMELSSAVFEKLESKTAA 199
Query: 194 SWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRL 252
SW++++ + L FR M + + + + +H
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 253 VMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADE 312
++ S + N+ V SL+DMY +CGC++ A +F M R ++++++I G A +G +
Sbjct: 260 LLRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
AL F+ M KEG EPD V Y L ACSH+GL+ EG R+F +M + ++ P EHYGCLV
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
Query: 373 DLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS 432
DL RAG LEEAL+ I+++P++ N+V+ + L+ CR + I L + + L++L
Sbjct: 379 DLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPG 438
Query: 433 NYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGS 492
+Y+L+SN+Y+ WD + R + +G+++ PGFS +E+ ++FV+ D+SH +
Sbjct: 439 DYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKE 498
Query: 493 IYASLELLSFELQLCGYVPDFSD 515
IY L + ++L+ GY PD +
Sbjct: 499 IYKMLHQMEWQLKFEGYSPDLTQ 521
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 195 WTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVM 254
+ +I G+V ++AL + EM G PD T +H V
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 255 TQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEAL 314
+ L+ +V V NSLI+MY RCG +E++ VF+ + +T SW+S++ A G+ E L
Sbjct: 160 -KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECL 218
Query: 315 SFFNSMQKE-GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAP-RIEHYGCLV 372
F M E + + AL AC++ G ++ G+ I + +R I+ I LV
Sbjct: 219 LLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL--LRNISELNIIVQTSLV 276
Query: 373 DLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
D+Y + G L++AL + + M K N + ++++ GE
Sbjct: 277 DMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGE 315
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVS 111
+ +W+S ++ G E F M E ++ +++ L CA + +++
Sbjct: 195 SKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACA---NTGALN 251
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
G ++H + + ++N + V T+L+DMY K G +D A +F +M RN ++++ M+ G
Sbjct: 252 LGMSIHGFLLRNISELNII-VQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGL 310
Query: 172 MRSGEIEDALQLFDEF 187
GE E AL++F +
Sbjct: 311 ALHGEGESALRMFSKM 326
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 282 ARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
A +F G+ +N++I G+ +EAL F+N M + G EPD +Y L AC+
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 342 AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
I EG +I ++ ++ + + L+++Y R G +E + V + + K
Sbjct: 145 LKSIREGKQIHGQVFKL-GLEADVFVQNSLINMYGRCGEMELSSAVFEKLESK 196
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 229/457 (50%), Gaps = 36/457 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT+ IA + + +A +TF +M + + + + L +S CA ++ G
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA---GLQALKEGQQ 612
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA A G +D+ AL+ +Y+ R G
Sbjct: 613 IHAQACVSGFS-SDLPFQNALVTLYS-------------------------------RCG 640
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+IE++ F++ + I+W AL+ GF + ++++AL F M G+ + T
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH V+T+ V N+LI MYA+CG I A + F + + V
Sbjct: 701 AASETANMKQGKQVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV 759
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN+II ++ +G EAL F+ M P+ V+ G L+ACSH GL+D+G+ F M
Sbjct: 760 SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 819
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
++P+ EHY C+VD+ +RAG L A + I+ MP+KP+ +V +LL+AC + +
Sbjct: 820 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 879
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
E +L+EL+P + YVLLSN+YA KWD + R+ MK++G++K+PG S IE+ +
Sbjct: 880 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 939
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
SI+ F GD++H I+ + L+ GYV D
Sbjct: 940 SIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 165/380 (43%), Gaps = 45/380 (11%)
Query: 66 HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGL 125
C G+ +A F RM +EP++ TL +L+ C+ + ++ G +HAY KLG
Sbjct: 366 QCGYGE--KAMELFKRMHLDGLEPDSNTLASLVVACS---ADGTLFRGQQLHAYTTKLGF 420
Query: 126 DMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFD 185
N+ K+ AL+++YAK +IE AL F
Sbjct: 421 ASNN-KIEGALLNLYAKCA-------------------------------DIETALDYFL 448
Query: 186 EFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXX 245
E V N + W ++ + D + + FR+MQ+ + P+ T
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 246 XXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFA 305
+H ++ + + + N V + LIDMYA+ G ++ A + + +VSW ++I G+
Sbjct: 509 GEQIHSQII-KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 306 ANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRI 365
D+AL+ F M G D V T A++AC+ + EG +I + V + +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDL 626
Query: 366 EHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE 425
LV LYSR G++EE+ + N + +L++ + G E+ ++ V
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGN---NEEALRVFVR 682
Query: 426 LDPGG--DSNYVLLSNIYAA 443
++ G ++N+ S + AA
Sbjct: 683 MNREGIDNNNFTFGSAVKAA 702
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 176/440 (40%), Gaps = 77/440 (17%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W I + E FVRM V PN T +L C SV+F
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC----RGGSVAFDVVEQI 209
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRN-LVSWNTMLDGYMRSGEI 177
+AR L GLR+ V N ++D Y R+G +
Sbjct: 210 HARIL-------------------------------YQGLRDSTVVCNPLIDLYSRNGFV 238
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
+ A ++FD +++ SW A+I G K + +A+ F +M + G+ P
Sbjct: 239 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H LV+ + + V N+L+ +Y G + A +F M R V++
Sbjct: 299 KKIESLEIGEQLHGLVL-KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N++I G + G ++A+ F M +G EPD + + ACS G + G ++ +
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALD------------------------------- 386
+ A + G L++LY++ +E ALD
Sbjct: 418 L-GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 387 VIKNMPMK---PNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV--LLSNIY 441
+ + M ++ PN+ S+L C G++ L E++ +++ + ++ YV +L ++Y
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA-YVCSVLIDMY 535
Query: 442 AAVGKWDGANK--VRRAMKD 459
A +GK D A +R A KD
Sbjct: 536 AKLGKLDTAWDILIRFAGKD 555
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 163/408 (39%), Gaps = 72/408 (17%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
+ V W + + L + F +M+ E+ PN T ++L C +
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL---GDLEL 508
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G +H+ K +N V + LIDMYAK G +D+A + + +++VSW TM+ GY
Sbjct: 509 GEQIHSQIIKTNFQLN-AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
+ FD+ +AL FR+M G+ D V +
Sbjct: 568 QYN--------FDD-----------------------KALTTFRQMLDRGIRSDEVGLTN 596
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+H ++ N+L+ +Y+RCG IE + F+
Sbjct: 597 AVSACAGLQALKEGQQIHAQACV-SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAG 655
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR-- 350
++WN+++ GF +G +EAL F M +EG + + ++ A+ A S + +G +
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH 715
Query: 351 ---------------------------IFNKMKRVRRIAPRIE-HYGCLVDLYSRAGRLE 382
I + K+ ++ + E + +++ YS+ G
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGS 775
Query: 383 EALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELD 427
EALD M ++PN V L +L+AC IGL +K + Y ++
Sbjct: 776 EALDSFDQMIHSNVRPNHVTLVGVLSAC---SHIGLVDKGIAYFESMN 820
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 175/419 (41%), Gaps = 55/419 (13%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
+W + I+ ++ EA F M + P ++LS C S+ G +H
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC---KKIESLEIGEQLH 311
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
KLG +D V AL+ +Y GN+ SA +F M R+ V++NT+++G + G
Sbjct: 312 GLVLKLGFS-SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG-- 368
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
+ ++A+E F+ M L G+ PD T+
Sbjct: 369 -----------------------------YGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H T+ N ++ +L+++YA+C IE A F +V W
Sbjct: 400 SADGTLFRGQQLHAYT-TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 298 NSIIVGFAANGLADE---ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
N ++V + GL D+ + F MQ E P+ +Y L C G ++ G +I ++
Sbjct: 459 NVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 355 MKRVRRIAPRIEHYGC--LVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+ + ++ Y C L+D+Y++ G+L+ A D++ K +VV + + A T +
Sbjct: 516 IIKTNF---QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK--DVVSWTTMIAGYT--Q 568
Query: 413 IGLAEKVMKYLVE-LDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
+K + + LD G S+ V L+N AV G ++ + GFSS
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTN---AVSACAGLQALKEGQQIHAQACVSGFSS 624
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 155/398 (38%), Gaps = 84/398 (21%)
Query: 87 VEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNV 146
+ PN+ TL LL GC + S+ G +H+ KLGLD N
Sbjct: 80 IRPNHQTLKWLLEGC--LKTNGSLDEGRKLHSQILKLGLDSNGCLS-------------- 123
Query: 147 DSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKD 206
+ D Y+ G++ A ++FDE P R +W +I ++
Sbjct: 124 ------------------EKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 207 HHKQALECFREMQLSGVAPDYVTVXXXXXXXXX-XXXXXXXXWVHRLVMTQDSLKDNVRV 265
+ F M V P+ T +H ++ Q L+D+ V
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ-GLRDSTVV 224
Query: 266 SNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGF 325
N LID+Y+R G +++AR+VFDG+ + SW ++I G + N EA+ F M G
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 284
Query: 326 EPDGVSYTGALTACS-----------------------------------HAGLIDEGLR 350
P +++ L+AC H G +
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAAC 407
IF+ M + + Y L++ S+ G E+A+++ K M ++P+ L SL+ AC
Sbjct: 345 IFSNMSQRDAVT-----YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 408 RTKGEIGLAEKVMKYLVELDPGGDSNYVL---LSNIYA 442
G + +++ Y +L G SN + L N+YA
Sbjct: 400 SADGTLFRGQQLHAYTTKL--GFASNNKIEGALLNLYA 435
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 194/351 (55%), Gaps = 1/351 (0%)
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP 225
+++ Y +G +E A ++FDE PVR+ +SW +I F H QAL ++ M GV
Sbjct: 147 SLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCG 206
Query: 226 DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
D T+ +HR + + V VSN+LIDMYA+CG +E A V
Sbjct: 207 DSYTLVALLSSCAHVSALNMGVMLHR-IACDIRCESCVFVSNALIDMYAKCGSLENAIGV 265
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
F+GM R +++WNS+I+G+ +G EA+SFF M G P+ +++ G L CSH GL+
Sbjct: 266 FNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLV 325
Query: 346 DEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLA 405
EG+ F M + P ++HYGC+VDLY RAG+LE +L++I + V+ +LL
Sbjct: 326 KEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
Query: 406 ACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKK 465
+C+ + L E MK LV+L+ +YVL+++IY+A +R+ ++ ++
Sbjct: 386 SCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTV 445
Query: 466 PGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFSDK 516
PG+S IEI ++KFV DK H E+ IY+ L + L GY P+ S++
Sbjct: 446 PGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNR 496
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 20/240 (8%)
Query: 174 SGEIEDALQLFDEFPVRNAIS-WTALIGGFVKKDHHKQALECFREMQLSGVA-PDYVTVX 231
+G + A LFD F + S W LI GF ++ + M LS V+ PD T
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFN 111
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
+H V+ L D + V+ SL+ Y+ G +EIA +VFD M
Sbjct: 112 FALKSCERIKSIPKCLEIHGSVIRSGFLDDAI-VATSLVRCYSANGSVEIASKVFDEMPV 170
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
R +VSWN +I F+ GL ++ALS + M EG D + L++C+H ++ G+ +
Sbjct: 171 RDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVML 230
Query: 352 FNKMKRVRRIAPRIEHYGC------LVDLYSRAGRLEEALDVIKNMPMKP----NEVVLG 401
RIA I C L+D+Y++ G LE A+ V M + N +++G
Sbjct: 231 -------HRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIG 283
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 36/246 (14%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W I G +A S + RM V ++ TL+ LLS CAH S+++ G +
Sbjct: 174 VSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHV---SALNMGVML 230
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H A + + + V V ALIDMYAK G++++A VF+ M R++++WN+M+ GY G
Sbjct: 231 HRIACDIRCE-SCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG- 288
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
H +A+ FR+M SGV P+ +T
Sbjct: 289 ------------------------------HGVEAISFFRKMVASGVRPNAITFLGLLLG 318
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ-VFDGMLHRTMV 295
++ +Q L NV+ ++D+Y R G +E + + ++ H V
Sbjct: 319 CSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPV 378
Query: 296 SWNSII 301
W +++
Sbjct: 379 LWRTLL 384
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 246/470 (52%), Gaps = 39/470 (8%)
Query: 39 NTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLL 98
+ ++SF + + + D V+W + I+ ++G E M++ + + IT+ LL
Sbjct: 368 SVHKSFGVFLSMRERD-VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426
Query: 99 SGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL 158
S ++ + G HA+ + G+ + + LIDMY+KSG + ++ +F+ G
Sbjct: 427 SAASNLRNKE---IGKQTHAFLIRQGIQFEGMN--SYLIDMYSKSGLIRISQKLFEGSG- 480
Query: 159 RNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM 218
+ R+ +W ++I G+ + H ++ FR+M
Sbjct: 481 ----------------------------YAERDQATWNSMISGYTQNGHTEKTFLVFRKM 512
Query: 219 QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGC 278
+ P+ VTV +H + Q L NV V+++L+DMY++ G
Sbjct: 513 LEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ-YLDQNVFVASALVDMYSKAGA 571
Query: 279 IEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTA 338
I+ A +F R V++ ++I+G+ +G+ + A+S F SMQ+ G +PD +++ L+A
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEV 398
CS++GLIDEGL+IF +M+ V I P EHY C+ D+ R GR+ EA + +K + + N
Sbjct: 632 CSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIA 691
Query: 399 VL-GSLLAACRTKGEIGLAEKVMKYLVELDPGGD-SNY-VLLSNIYAAVGKWDGANKVRR 455
L GSLL +C+ GE+ LAE V + L + D G + S Y VLLSN+YA KW +KVRR
Sbjct: 692 ELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRR 751
Query: 456 AMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
M+++G++K+ G S IEI + FV+ D+ H + IY ++ L+ +++
Sbjct: 752 GMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 186/402 (46%), Gaps = 75/402 (18%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPS---SVSF 112
VAW + I+ + ++G+ EA F M EV+P+ ++ + + +P+ S S+
Sbjct: 179 VVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV------FPAVSISRSIKK 232
Query: 113 GATVHAYARKLGLD-MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
+ KLG + + D+ V ++ I MYA+ G+++S+R VFD RN+ WNTM+ Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
+++ + ++++LF E AI ++ V A+ ++++L +V
Sbjct: 293 VQNDCLVESIELFLE-----AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV--- 344
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
+++ + + + NSL+ MY+RCG + + VF M
Sbjct: 345 -----------------------SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE 381
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS----------- 340
R +VSWN++I F NGL DE L MQK+GF+ D ++ T L+A S
Sbjct: 382 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQT 441
Query: 341 HAGLIDEGLR----------IFNKMKRVRRIAPRIEHYG----------CLVDLYSRAGR 380
HA LI +G++ +++K +R E G ++ Y++ G
Sbjct: 442 HAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Query: 381 LEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKV 419
E+ V + M ++PN V + S+L AC G + L +++
Sbjct: 502 TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 16/292 (5%)
Query: 182 QLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXX 241
++FD +N ++W LI +VK + +A F M V P V+
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 242 XXXXXXWVHRLVMT-QDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSI 300
+ L++ D ++ V +S I MYA G IE +R+VFD + R + WN++
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 301 IVGFAANGLADEALS-FFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVR 359
I + N E++ F ++ + D V+Y A +A S ++ G + + +
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 360 RIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKV 419
R P I L+ +YSR G + ++ V + M+ +VV + + + + GL ++
Sbjct: 349 RELP-IVIVNSLMVMYSRCGSVHKSFGVF--LSMRERDVVSWNTMISAFVQN--GLDDEG 403
Query: 420 MKYLVELDPGG-DSNYVLLSNIYAA--------VGKWDGANKVRRAMKDRGI 462
+ + E+ G +Y+ ++ + +A +GK A +R+ ++ G+
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM 455
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 163 SWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG 222
S + L + G + A QLFD P + W +I GF+ + +AL + M+ +
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKT- 99
Query: 223 VAP----DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRV-SNSLIDMYARC- 276
AP D T VH ++ L+++ RV NSL++MY C
Sbjct: 100 -APFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIR--CLQNSSRVVHNSLMNMYVSCL 156
Query: 277 ---GCIE--IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVS 331
C E + R+VFD M + +V+WN++I + G EA F M + +P VS
Sbjct: 157 NAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVS 216
Query: 332 YTGALTACS 340
+ A S
Sbjct: 217 FVNVFPAVS 225
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG--FEPDGVSYTGALT 337
++ARQ+FD + T V WN+II+GF N L EAL F++ M+K D +Y+ L
Sbjct: 56 QLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLK 115
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLY 375
AC+ + G + + R + + R+ H L+++Y
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSRVVH-NSLMNMY 152
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 212/425 (49%), Gaps = 43/425 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
VAW S I+ + + +A F M+ V+ N ++ LL C + G
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGR---CKDIVTGKW 229
Query: 116 VHAYARKLGLDMN-------DVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTML 168
H + + LG D +V + T+LIDMYAK
Sbjct: 230 FHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKC------------------------- 264
Query: 169 DGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
G++ A LFD P R +SW ++I G+ + ++AL F +M G+APD V
Sbjct: 265 ------GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKV 318
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T +H V +KD V +L++MYA+ G E A++ F+
Sbjct: 319 TFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC-ALVNMYAKTGDAESAKKAFED 377
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDE 347
+ + ++W +I+G A++G +EALS F MQ++G PDG++Y G L ACSH GL++E
Sbjct: 378 LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEE 437
Query: 348 GLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
G R F +M+ + + P +EHYGC+VD+ SRAGR EEA ++K MP+KPN + G+LL C
Sbjct: 438 GQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC 497
Query: 408 RTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPG 467
+ L +++ + E + G YVLLSNIYA G+W +R +MK + + K G
Sbjct: 498 DIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLG 557
Query: 468 FSSIE 472
SS+E
Sbjct: 558 HSSVE 562
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 202/494 (40%), Gaps = 103/494 (20%)
Query: 51 KHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSV 110
KH P + S +CRS LVE M ++ V N I L L+ C P ++
Sbjct: 4 KHYKPIL----SQLENCRS--LVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNL 57
Query: 111 SFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM-------------- 156
S+ +V +D V + ++I Y+ S N D A + + +M
Sbjct: 58 SYARSVFE-----SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 157 ------GLR-------------------NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRN 191
GLR N+ +L YM GE+ L++F++ P N
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 192 AISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHR 251
++W +LI GFV + A+E FREMQ +GV + + W H
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 252 LVMT-------QDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGF 304
+ Q + NV ++ SLIDMYA+CG + AR +FDGM RT+VSWNSII G+
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 305 AANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPR 364
+ NG A+EAL F M G PD V++ + A G G I + + +
Sbjct: 293 SQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDA 352
Query: 365 IEHYGCLVDLYSRAGRLE-------------------------------EALDVIKNMPM 393
LV++Y++ G E EAL + + M
Sbjct: 353 -AIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQE 411
Query: 394 K----PNEVVLGSLLAACRTKGEIGLAEKVMKYLVE------LDPGGDSNYVLLSNIYAA 443
K P+ + +L AC IGL E+ +Y E L+P + +Y + +I +
Sbjct: 412 KGNATPDGITYLGVLYAC---SHIGLVEEGQRYFAEMRDLHGLEPTVE-HYGCMVDILSR 467
Query: 444 VGKWDGANKVRRAM 457
G+++ A ++ + M
Sbjct: 468 AGRFEEAERLVKTM 481
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 222/444 (50%), Gaps = 38/444 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEV--EPNNITLITLLSGCAHYPSPSSVSFGA 114
V+W S I+ + G L + RM +EV PN +T ++++S C + S G
Sbjct: 98 VSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE---GR 154
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+H K G+ + +VKV A I+ Y K+G++ S
Sbjct: 155 CIHGLVMKFGV-LEEVKVVNAFINWYGKTGDLTS-------------------------- 187
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
+ +LF++ ++N +SW +I ++ ++ L F + G PD T
Sbjct: 188 -----SCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVL 242
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H L+M N ++ +L+D+Y++ G +E + VF +
Sbjct: 243 RSCEDMGVVRLAQGIHGLIMF-GGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDS 301
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
++W +++ +A +G +A+ F M G PD V++T L ACSH+GL++EG F
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFET 361
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M + RI PR++HY C+VDL R+G L++A +IK MPM+P+ V G+LL ACR +
Sbjct: 362 MSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQ 421
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
L K + L EL+P NYV+LSNIY+A G W A+++R MK +G+ + G S IE
Sbjct: 422 LGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHG 481
Query: 475 SSIYKFVAGDKSHEENGSIYASLE 498
+ I+KFV GD SH E+ I L+
Sbjct: 482 NKIHKFVVGDWSHPESEKIQKKLK 505
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 15/254 (5%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS--G 222
+ ++ Y+R G A +LFDE P R+ +SW +LI G+ + + + E M +S G
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 223 VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIA 282
P+ VT +H LVM L++ V+V N+ I+ Y + G + +
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEE-VKVVNAFINWYGKTGDLTSS 188
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
++F+ + + +VSWN++IV NGLA++ L++FN ++ G EPD ++ L +C
Sbjct: 189 CKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDM 248
Query: 343 GLID-----EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNE 397
G++ GL +F + I L+DLYS+ GRLE++ V + P+
Sbjct: 249 GVVRLAQGIHGLIMFGGFSGNKCITT------ALLDLYSKLGRLEDSSTVFHEIT-SPDS 301
Query: 398 VVLGSLLAACRTKG 411
+ ++LAA T G
Sbjct: 302 MAWTAMLAAYATHG 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 265 VSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM--QK 322
+ + L+ Y R G A ++FD M R +VSWNS+I G++ G + + M +
Sbjct: 68 IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISE 127
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLE 382
GF P+ V++ ++AC + G +EG R + + + ++ ++ Y + G L
Sbjct: 128 VGFRPNEVTFLSMISACVYGGSKEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 383 EALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
+ + +++ +K N V +++ + GLAEK + Y
Sbjct: 187 SSCKLFEDLSIK-NLVSWNTMIV---IHLQNGLAEKGLAYF 223
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 229/470 (48%), Gaps = 41/470 (8%)
Query: 47 RHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPS 106
R ++ T ++ C +G+L EA + +VEP T LL C
Sbjct: 67 RFQVENQRKTEKLDKTLKGLCVTGRLKEAVG-LLWSSGLQVEPE--TYAVLLQECKQRKE 123
Query: 107 PSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNT 166
+ G +HA +G +N+ + L+ +YA SG++ +A ++F + +R+L+ WN
Sbjct: 124 YTK---GKRIHAQMFVVGFALNEY-LKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNA 179
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
M+ GY V+K ++ L + +M+ + + PD
Sbjct: 180 MISGY-------------------------------VQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
T H VM + +K N+ V ++L+DMY +C +VF
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAH-AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
D + R +++W S+I G+ +G E L F M++EG P+ V++ LTAC+H GL+D
Sbjct: 268 DQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVD 327
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
+G F MKR I P +HY +VD RAGRL+EA + + P K + V GSLL A
Sbjct: 328 KGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA 387
Query: 407 CRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKP 466
CR G + L E +ELDP NYV+ +N YA+ G + A+KVRR M++ G++K P
Sbjct: 388 CRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDP 447
Query: 467 GFSSIEIDSSIYKFVAGDKSHEENGSIYASL-ELLSFELQLCGYVPDFSD 515
G+S IE+ +++F+ D SH + IY + E+ SF + + Y PD D
Sbjct: 448 GYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDI-DYYPDGLD 496
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 225/426 (52%), Gaps = 10/426 (2%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAAST--FVRMREAEVEPNNITLITLLSGCAHYPSPSSV 110
T+P+ ++I C + +S FV MR V P+ T + CA + +
Sbjct: 75 TNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKN-GDL 133
Query: 111 SFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDG 170
+ T+H A + GL ++D+ LI +Y+ +DSA +FD+ R++V++N ++DG
Sbjct: 134 TLVKTLHCQALRFGL-LSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDG 192
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
+++ EI A +LFD P+R+ +SW +LI G+ + +H ++A++ F EM G+ PD V +
Sbjct: 193 LVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAI 252
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H + D+ ++ L+D YA+CG I+ A ++F+
Sbjct: 253 VSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF-LATGLVDFYAKCGFIDTAMEIFELCS 311
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+T+ +WN++I G A +G + + +F M G +PDGV++ L CSH+GL+DE
Sbjct: 312 DKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARN 371
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPM----KPNEVVLGSLLAA 406
+F++M+ + + ++HYGC+ DL RAG +EEA ++I+ MP + + LL
Sbjct: 372 LFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGG 431
Query: 407 CRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAM-KDRGIRKK 465
CR G I +AEK + L P Y ++ +YA +W+ KVR + +D+ ++K
Sbjct: 432 CRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKN 491
Query: 466 PGFSSI 471
GFS +
Sbjct: 492 VGFSKV 497
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 225/419 (53%), Gaps = 12/419 (2%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLL-SGCAHYPSPSSVSFGATVH 117
+ + I + +G+ + + F M + V+PNN+T +L+ + C+ + SVS+G +H
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSF----SVSYGVALH 109
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
A K G + D V T+ + Y + G+++S+R +FD + +V+ N++LD R+GE+
Sbjct: 110 GQALKRGF-LWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM---QLSGVAPDYVTVXXXX 234
+ A + F PV + +SWT +I GF KK H +AL F EM + + + P+ T
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 235 XXXXXXXX--XXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+H VM+++ + + +DMY + G +E+A +FD + +
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTAL-LDMYGKAGDLEMALTIFDQIRDK 287
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+ +WN+II A+NG +AL F M+ P+G++ LTAC+ + L+D G+++F
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+ + +I P EHYGC+VDL RAG L +A + I+++P +P+ VLG+LL AC+
Sbjct: 348 SSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHEN 407
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
L V K L+ L P YV LS A W A K+R+AM + GIRK P +S +
Sbjct: 408 TELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 221/418 (52%), Gaps = 17/418 (4%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W + I + +G V A+ F E V N +T I ++ G Y +
Sbjct: 115 WNAMIGGYMSNGDAVLASGLF---EEISVCRNTVTWIEMIKG---YGKRIEIE---KARE 165
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
++ ++ +VK + ++ +Y + ++ AR F+ + +N W+ M+ GY R G++
Sbjct: 166 LFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVH 225
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
+A +F R+ + W LI G+ + + A++ F MQ G PD VTV
Sbjct: 226 EARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACA 285
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
VH L+ ++ N VSN+LIDMYA+CG +E A VF+ + R++ N
Sbjct: 286 QSGRLDVGREVHSLI-NHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCN 344
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRV 358
S+I A +G EAL F++M+ +PD +++ LTAC H G + EGL+IF++MK
Sbjct: 345 SMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMK-T 403
Query: 359 RRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEK 418
+ + P ++H+GCL+ L R+G+L+EA ++K M +KPN+ VLG+LL AC+ + +AE+
Sbjct: 404 QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQ 463
Query: 419 VMKYLVELDPGGDSNY-----VLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
VMK ++E ++Y +SN+YA +W A +R M+ RG+ K PG SS+
Sbjct: 464 VMK-IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 169/345 (48%), Gaps = 37/345 (10%)
Query: 63 IAHHCRSGQLVEAASTFVRMREAEVE-PNNITLITLLSGCAHYPSPSSVSFGATVHAYAR 121
I +H G ++A + +R V P + LI C V G +H+ +
Sbjct: 18 IKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACV----VPRVVLGKLLHSESI 73
Query: 122 KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDAL 181
K G+ +DV VG++LI MY K G V SAR VFD+M RN+ +WN M+ GYM +G+ A
Sbjct: 74 KFGV-CSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 182 QLFDEFPV-RNAISWTALIGGFVKKDHHKQALECFREM--QLSGVAPDYVTVXXXXXXXX 238
LF+E V RN ++W +I G+ K+ ++A E F M +L V V +
Sbjct: 133 GLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRK 192
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
+D + N V + ++ Y R G + AR +F + R +V WN
Sbjct: 193 MEDARK---------FFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWN 243
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRV 358
++I G+A NG +D+A+ F +MQ EG+EPD V+ + L+AC+ +G +D G
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG---------- 293
Query: 359 RRIAPRIEHYG---------CLVDLYSRAGRLEEALDVIKNMPMK 394
R + I H G L+D+Y++ G LE A V +++ ++
Sbjct: 294 REVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 8/174 (4%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V W + IA + ++G +A F M+ EP+ +T+ ++LS CA + G V
Sbjct: 240 VIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ---SGRLDVGREV 296
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H+ G+++N V ALIDMYAK G++++A VF+ + +R++ N+M+ G+
Sbjct: 297 HSLINHRGIELNQF-VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK 355
Query: 177 IEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
++AL++F + I++ A++ V + L+ F EM+ V P+
Sbjct: 356 GKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPN 409
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 210/419 (50%), Gaps = 37/419 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V W + + + + E F MR+ + + +TLI L+ C + + G
Sbjct: 175 SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGK---VGKC 231
Query: 116 VHAYA-RKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
VH + R+ +D +D + ++IDMY K +D+AR
Sbjct: 232 VHGVSIRRSFIDQSDY-LQASIIDMYVKCRLLDNAR------------------------ 266
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
+LF+ RN + WT LI GF K + +A + FR+M + P+ T+
Sbjct: 267 -------KLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
VH ++ D V + S IDMYARCG I++AR VFD M R +
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT-SFIDMYARCGNIQMARTVFDMMPERNV 378
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
+SW+S+I F NGL +EAL F+ M+ + P+ V++ L+ACSH+G + EG + F
Sbjct: 379 ISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFES 438
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M R + P EHY C+VDL RAG + EA I NMP+KP G+LL+ACR E+
Sbjct: 439 MTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVD 498
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEI 473
LA ++ + L+ ++P S YVLLSNIYA G W+ N VRR M +G RK G S+ E+
Sbjct: 499 LAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 139/335 (41%), Gaps = 67/335 (20%)
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G +H A K GLD +D V +L++MYA+ G ++SA+
Sbjct: 128 GILIHGLAMKNGLDKDDY-VAPSLVEMYAQLGTMESAQ---------------------- 164
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
++FDE PVRN++ W L+ G++K + F M+ +G+A D +T+
Sbjct: 165 ---------KVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLIC 215
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
VH + + + + + + S+IDMY +C ++ AR++F+ + R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+V W ++I GFA A EA F M +E P+ + L +CS G + G +
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRL------------------------------- 381
M R I ++ +D+Y+R G +
Sbjct: 336 GYMIR-NGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLF 394
Query: 382 EEALDVIKNMPMK---PNEVVLGSLLAACRTKGEI 413
EEALD M + PN V SLL+AC G +
Sbjct: 395 EEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 136/337 (40%), Gaps = 40/337 (11%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPV--RNAISWTALIGGFVKKDH--HKQALECFREMQL 220
+++ + Y++S ++ A F+ P RN SW ++ G+ K + L + M+
Sbjct: 43 SSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR 102
Query: 221 SGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIE 280
D + +H L M KD+ V+ SL++MYA+ G +E
Sbjct: 103 HCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDY-VAPSLVEMYAQLGTME 161
Query: 281 IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVS--------- 331
A++VFD + R V W ++ G+ E F M+ G D ++
Sbjct: 162 SAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACG 221
Query: 332 --YTGALTACSH----------------AGLIDEGL--RIFNKMKRV--RRIAPRIEHYG 369
+ G + C H A +ID + R+ + +++ + + +
Sbjct: 222 NVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWT 281
Query: 370 CLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
L+ +++ R EA D+ + M + PN+ L ++L +C + G + + V Y++
Sbjct: 282 TLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN 341
Query: 427 DPGGDS-NYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
D+ N+ ++YA G A V M +R +
Sbjct: 342 GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNV 378
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM--LHRTMVSWNSIIVGFAA 306
VH V+ +D V + +SL + Y + ++ A F+ + R SWN+I+ G++
Sbjct: 26 VHAKVIIH-GFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 307 NGLA--DEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF-----NKMKRVR 359
+ + L +N M++ D + A+ AC GL++ G+ I N + +
Sbjct: 85 SKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDD 144
Query: 360 RIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
+AP LV++Y++ G +E A V +P++ N V+ G L+
Sbjct: 145 YVAPS------LVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLM 182
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 234/459 (50%), Gaps = 39/459 (8%)
Query: 57 VAWTSSIAHHCRSGQ-LVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W S I RS + L EA F+ + A + N IT ++L + S S G
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL---SAVSSLSFGELGKQ 538
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H A K + ++ ALI Y K G +D +F +M R
Sbjct: 539 IHGLALKNNI-ADEATTENALIACYGKCGEMDGCEKIFSRMAER---------------- 581
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
R+ ++W ++I G++ + +AL+ M +G D
Sbjct: 582 --------------RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 627
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH + L+ +V V ++L+DMY++CG ++ A + F+ M R
Sbjct: 628 AFASVATLERGMEVHA-CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 686
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
SWNS+I G+A +G +EAL F +M+ +G PD V++ G L+ACSHAGL++EG + F
Sbjct: 687 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 746
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA-CRTKGEI 413
M +APRIEH+ C+ D+ RAG L++ D I+ MPMKPN ++ ++L A CR G
Sbjct: 747 MSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 806
Query: 414 G-LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
L +K + L +L+P NYVLL N+YAA G+W+ K R+ MKD ++K+ G+S +
Sbjct: 807 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 866
Query: 473 IDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP 511
+ ++ FVAGDKSH + IY L+ L+ +++ GYVP
Sbjct: 867 MKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVP 905
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 164/372 (44%), Gaps = 40/372 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V+W S I+ + ++G A F M+ P T +L++ P V
Sbjct: 171 SVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPD-VRLLEQ 229
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+ +K GL + D+ VG+ L+ +AKSG++ AR
Sbjct: 230 IMCTIQKSGL-LTDLFVGSGLVSAFAKSGSLSYAR------------------------- 263
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ-LSGVAPD-YVTVXXX 233
++F++ RNA++ L+ G V++ ++A + F +M + V+P+ YV +
Sbjct: 264 ------KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 234 --XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
VH V+T + V + N L++MYA+CG I AR+VF M
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
+ VSWNS+I G NG EA+ + SM++ P + +L++C+ G +I
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
+ ++ I + L+ LY+ G L E + +MP + ++V S++ A +
Sbjct: 438 HGESLKL-GIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGAL-ARS 494
Query: 412 EIGLAEKVMKYL 423
E L E V+ +L
Sbjct: 495 ERSLPEAVVCFL 506
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 27/291 (9%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N +++ Y+ +G+ A ++FDE P+RN +SW ++ G+ + HK+AL R+M G+
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 225 PD---YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC-GCIE 280
+ +V+V +H L+ D V VSN LI MY +C G +
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQ-IHGLMFKLSYAVDAV-VSNVLISMYWKCIGSVG 157
Query: 281 IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGAL--TA 338
A F + + VSWNSII ++ G A F+SMQ +G P ++ G+L TA
Sbjct: 158 YALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF-GSLVTTA 216
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDL---------YSRAGRLEEALDVIK 389
CS L + +R+ + +I I+ G L DL ++++G L A V
Sbjct: 217 CS---LTEPDVRL------LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN 267
Query: 390 NMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNI 440
M + + G ++ R K + M +D +S +LLS+
Sbjct: 268 QMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSF 318
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 133/351 (37%), Gaps = 53/351 (15%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W ++ + R+G+ EA M + + N +++L C S + FG +
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVG-ILFGRQI 126
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKS-GNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
H KL ++ V V LI MY K G+V A F + ++N VSWN+++ Y ++G
Sbjct: 127 HGLMFKLSYAVDAV-VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ + A F MQ G P T
Sbjct: 186 D-------------------------------QRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 236 XXXXXXXXXXXXWVHRLVMTQDS-LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+ Q S L ++ V + L+ +A+ G + AR+VF+ M R
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKE-GFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
V+ N ++VG +EA F M P+ SY L++ L +E
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEE-----V 327
Query: 354 KMKRVRRIAPRIEHYGC----------LVDLYSRAGRLEEALDVIKNMPMK 394
+K+ R + + G LV++Y++ G + +A V M K
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 38/205 (18%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+ ++ L +V + N+LI+ Y G AR+VFD M R VSW I+ G++ NG EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLID--EGLRIFNKMKRVRRIAPRI------ 365
L F M KEG + ++ L AC G + G +I M ++ +
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 366 -EHYGC------------------------LVDLYSRAGRLEEALDVIKNMPM---KPNE 397
++ C ++ +YS+AG A + +M +P E
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTE 206
Query: 398 VVLGSLL-AACR-TKGEIGLAEKVM 420
GSL+ AC T+ ++ L E++M
Sbjct: 207 YTFGSLVTTACSLTEPDVRLLEQIM 231
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 220/446 (49%), Gaps = 41/446 (9%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAE-VEPNNITLITLLSGCAHYPSPSSVSFGAT 115
VAW I + R+G++ +A F +M E ++P+ IT I LL S++ G T
Sbjct: 299 VAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA-------SAILEGRT 351
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H YA + G + + + TALIDMY + G + SA +
Sbjct: 352 IHGYAMRRGF-LPHMVLETALIDMYGECGQLKSAEV------------------------ 386
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+FD +N ISW ++I +V+ + ALE F+E+ S + PD T+
Sbjct: 387 -------IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H ++ + N + NSL+ MYA CG +E AR+ F+ +L + +V
Sbjct: 440 AYAESLSLSEGREIHAYIV-KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVV 498
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWNSII+ +A +G ++ F+ M P+ ++ L ACS +G++DEG F M
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
KR I P IEHYGC++DL R G A ++ MP P + GSLL A R +I +
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITI 618
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
AE + + +++ YVLL N+YA G+W+ N+++ M+ +GI + S++E
Sbjct: 619 AEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKG 678
Query: 476 SIYKFVAGDKSHEENGSIYASLELLS 501
+ F GD+SH IY L+++S
Sbjct: 679 KSHVFTNGDRSHVATNKIYEVLDVVS 704
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 173/439 (39%), Gaps = 79/439 (17%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W S I+ + G + F M + +P+ + ++ L C+H SP G +
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK---MGKEI 253
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H +A + ++ DV V T+++DMY+K G E
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYG-------------------------------E 282
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXXXX 235
+ A ++F+ RN ++W +IG + + A CF++M + +G+ PD +T
Sbjct: 283 VSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP 342
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H M + L V + +LIDMY CG ++ A +FD M + ++
Sbjct: 343 ASAILEGRT----IHGYAMRRGFLPHMV-LETALIDMYGECGQLKSAEVIFDRMAEKNVI 397
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWNSII + NG AL F + PD + L A + + + EG I +
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK--------------------- 394
+ R + I LV +Y+ G LE+A ++ +K
Sbjct: 458 VKSRYWSNTII-LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 395 -------------PNEVVLGSLLAACRTKGEIGLAEKV---MKYLVELDPGGDSNYVLLS 438
PN+ SLLAAC G + + MK +DPG + +Y +
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIE-HYGCML 575
Query: 439 NIYAAVGKWDGANKVRRAM 457
++ G + A + M
Sbjct: 576 DLIGRTGNFSAAKRFLEEM 594
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 112/243 (46%), Gaps = 3/243 (1%)
Query: 168 LDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
L G+ S +EDALQLFDE +A W +I GF + +A++ + M +GV D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
T +H +V+ + D V V NSLI +Y + GC A +VF+
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSD-VYVCNSLISLYMKLGCAWDAEKVFE 189
Query: 288 GMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE 347
M R +VSWNS+I G+ A G +L F M K GF+PD S AL ACSH
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249
Query: 348 GLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
G I R R + ++D+YS+ G + A + M + +V +++ C
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR--NIVAWNVMIGC 307
Query: 408 RTK 410
+
Sbjct: 308 YAR 310
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 153/355 (43%), Gaps = 42/355 (11%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W I G +EA + RM A V+ + T ++ A SS+ G +HA
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA---GISSLEEGKKIHA 154
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
KLG ++DV V +LI +Y K G +W
Sbjct: 155 MVIKLGF-VSDVYVCNSLISLYMKLG-----------------CAW-------------- 182
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
DA ++F+E P R+ +SW ++I G++ +L F+EM G PD +
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
+H + +V V S++DMY++ G + A ++F+GM+ R +V+WN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 299 SIIVGFAANGLADEALSFFNSM-QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
+I +A NG +A F M ++ G +PD ++ L A + I EG I R
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMR 358
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
R P + L+D+Y G+L+ A +VI + + N + S++AA G+
Sbjct: 359 -RGFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAAYVQNGK 411
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 216/430 (50%), Gaps = 37/430 (8%)
Query: 42 QSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGC 101
+S+ L D W S I+ G L EA F M + P+ TL +L+ C
Sbjct: 503 ESYKLFQGIPFKD-NACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVC 561
Query: 102 AHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL 161
+ +PS + G +H Y + G+D + +G+AL++MY+K G++ AR
Sbjct: 562 SSHPS---LPRGKEIHGYTLRAGID-KGMDLGSALVNMYSKCGSLKLAR----------- 606
Query: 162 VSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS 221
Q++D P + +S ++LI G+ + + FR+M +S
Sbjct: 607 --------------------QVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS 646
Query: 222 GVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEI 281
G D + VH + T+ L V +SL+ MY++ G I+
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYI-TKIGLCTEPSVGSSLLTMYSKFGSIDD 705
Query: 282 ARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
+ F + +++W ++I +A +G A+EAL +N M+++GF+PD V++ G L+ACSH
Sbjct: 706 CCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765
Query: 342 AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLG 401
GL++E N M + I P HY C+VD R+GRL EA I NM +KP+ +V G
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWG 825
Query: 402 SLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRG 461
+LLAAC+ GE+ L + K +EL+P Y+ LSNI A VG+WD + R+ MK G
Sbjct: 826 TLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTG 885
Query: 462 IRKKPGFSSI 471
++K+PG+SS+
Sbjct: 886 VQKEPGWSSV 895
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 153/358 (42%), Gaps = 40/358 (11%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT ++ + +S A F MR + VE NN T+ +++S C PS V +
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR---PSMVCEASQ 372
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VHA+ K G + D V ALI MY+KSG++D + VF+ +
Sbjct: 373 VHAWVFKSGFYL-DSSVAAALISMYSKSGDIDLSEQVFEDL------------------- 412
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
D+ +N ++ +I F + +A+ F M G+ D +V
Sbjct: 413 ---------DDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH + + L ++ V +SL +Y++CG +E + ++F G+ +
Sbjct: 462 VLDCLNLGKQ---VHGYTL-KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA 517
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
W S+I GF G EA+ F+ M +G PD + LT CS + G I
Sbjct: 518 CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYT 577
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
R I ++ LV++YS+ G L+ A V +P + + V SL++ G I
Sbjct: 578 LRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLI 633
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 144/343 (41%), Gaps = 48/343 (13%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
W + IA R+ F M +P++ T ++L+ CA S + FG V
Sbjct: 218 CWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA---SLEKLRFGKVVQ 274
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
A K G + DV V TA++D+YAK G+ +
Sbjct: 275 ARVIKCGAE--DVFVCTAIVDLYAKCGH-------------------------------M 301
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
+A+++F P + +SWT ++ G+ K + ALE F+EM+ SGV + TV
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM--LHRTMV 295
VH V D+ V+ +LI MY++ G I+++ QVF+ + + R +
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDS-SVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTA--CSHAGLIDEGLRIFN 353
N +I F+ + +A+ F M +EG D S L+ C + G G + +
Sbjct: 421 V-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKS 479
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPN 396
+ + L LYS+ G LEE+ + + +P K N
Sbjct: 480 GLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPFKDN 516
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 148/336 (44%), Gaps = 17/336 (5%)
Query: 61 SSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCA-HYPSPSSVSFGATVHAY 119
S ++ + SG + +AA F + + +V NI ++SG H S+ F + +H
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNI----MISGYKQHRLFEESLRFFSKMHF- 143
Query: 120 ARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL---VSWNTMLDGYMRSGE 176
LG + N++ G+ + A + S + + + V + ++D + ++
Sbjct: 144 ---LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
EDA ++F + N W +I G ++ ++ + F EM + PD T
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
V V+ + ++V V +++D+YA+CG + A +VF + + ++VS
Sbjct: 261 CASLEKLRFGKVVQARVIKCGA--EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN-KM 355
W ++ G+ + A AL F M+ G E + + T ++AC ++ E ++
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
K + + L+ +YS++G ++ + V +++
Sbjct: 379 KSGFYLDSSVA--AALISMYSKSGDIDLSEQVFEDL 412
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
+V ++ SL+ Y+ G + A ++FD + +VS N +I G+ + L +E+L FF+ M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 322 KEGFEPDGVSYTGALTACS--HAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAG 379
GFE + +SY ++ACS A L E L + +K +E L+D++S+
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSE-LVCCHTIKMGYFFYEVVE--SALIDVFSKNL 199
Query: 380 RLEEALDVIKN 390
R E+A V ++
Sbjct: 200 RFEDAYKVFRD 210
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 234/471 (49%), Gaps = 42/471 (8%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
++S+++ + G E + + NN+T LS + + ++ VH
Sbjct: 204 VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTY---LSSLRLFSNLRDLNLALQVH 260
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
+ + G + +V+ ALI+MY K G V A+ VFD +N+ T++D Y +
Sbjct: 261 SRMVRFGFNA-EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSF 319
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
E+AL LF + M V P+ T
Sbjct: 320 EEALNLFSK-------------------------------MDTKEVPPNEYTFAILLNSI 348
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H LV+ + +++V V N+L++MYA+ G IE AR+ F GM R +V+W
Sbjct: 349 AELSLLKQGDLLHGLVL-KSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTW 407
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N++I G + +GL EAL F+ M G P+ +++ G L ACSH G +++GL FN++ +
Sbjct: 408 NTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMK 467
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
+ P I+HY C+V L S+AG ++A D ++ P++ + V +LL AC + L +
Sbjct: 468 KFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGK 527
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSI 477
KV +Y +E P YVLLSNI+A +W+G KVR M +RG++K+PG S I I +
Sbjct: 528 KVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQT 587
Query: 478 YKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS------DKETYEDD 522
+ F+A D H E IYA ++ + +++ GY PD + D+E ED+
Sbjct: 588 HVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDN 638
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 250 HRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGL 309
H +V Q S ++ NSLI++Y +C AR++FD M R +VSW +++ G+ +G
Sbjct: 56 HLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGF 115
Query: 310 ADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY 368
E L F SM G P+ T +CS++G I+EG + + I+
Sbjct: 116 DFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVR- 174
Query: 369 GCLVDLYSRAGRLEEALDVIKNMP 392
LV +YS EA+ V+ ++P
Sbjct: 175 NTLVYMYSLCSGNGEAIRVLDDLP 198
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 143/358 (39%), Gaps = 41/358 (11%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMR-EAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
V+W + + + SG E F M E PN + C+ + + G
Sbjct: 100 VVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS---NSGRIEEGK 156
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAK-SGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
H K GL ++ V L+ MY+ SGN ++ R V D + +L +++ L GY+
Sbjct: 157 QFHGCFLKYGLISHEF-VRNTLVYMYSLCSGNGEAIR-VLDDLPYCDLSVFSSALSGYLE 214
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
G ++ L + + + + W L + +L F ++ +A
Sbjct: 215 CGAFKEGLDVLRKTANEDFV-WNNLT--------YLSSLRLFSNLRDLNLALQ------- 258
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
VH M + V +LI+MY +CG + A++VFD +
Sbjct: 259 ---------------VHSR-MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQN 302
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+ +I+ + + +EAL+ F+ M + P+ ++ L + + L+ +G + +
Sbjct: 303 IFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLH 361
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
+ + LV++Y+++G +E+A M + + V ++++ C G
Sbjct: 362 GLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 216/457 (47%), Gaps = 33/457 (7%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W S I + GQ E A +E + I + TL S S + G
Sbjct: 206 VSWNSMIVAY---GQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H K G N VG+ LID Y+K G D
Sbjct: 263 HGKLIKAGFHQNS-HVGSGLIDFYSKCGGCDG---------------------------- 293
Query: 177 IEDALQLFDEFPVRNAISWTALIGGF-VKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ D+ ++F E + + W +I G+ + ++ ++A++ FR+MQ G PD +
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H L + + + V+N+LI +Y + G ++ AR VFD M V
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAV 413
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
S+N +I G+A +G EAL + M G P+ +++ L+AC+H G +DEG FN M
Sbjct: 414 SFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
K +I P EHY C++DL RAG+LEEA I MP KP V +LL ACR + L
Sbjct: 474 KETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMAL 533
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
AE+ L+ + P + YV+L+N+YA KW+ VR++M+ + IRKKPG S IE+
Sbjct: 534 AERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKK 593
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
+ FVA D SH + LE + +++ GYV D
Sbjct: 594 KKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMD 630
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 16/335 (4%)
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G ++HA K + + + +++Y+K G + AR F N+ S+N ++ Y
Sbjct: 27 GKSLHALYVK-SIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYA 85
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
+ +I A QLFDE P + +S+ LI G+ A+ F+ M+ G D T+
Sbjct: 86 KDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSG 145
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH- 291
+ DS V+N+ + Y++ G + A VF GM
Sbjct: 146 LIAACCDRVDLIKQLHCFSVSGGFDSYSS---VNNAFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
R VSWNS+IV + + +AL+ + M +GF+ D + L A + + G +
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 352 FNKMKRVRRIAPRIEHYGC-LVDLYSRAGRLEEALDVIKNMP--MKPNEVVLGSLLAACR 408
K+ ++ + H G L+D YS+ G + D K + P+ VV ++++
Sbjct: 263 HGKL--IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYS 320
Query: 409 TKGEIGLAEKVMKYLVELDPGG----DSNYVLLSN 439
E L+E+ +K ++ G D ++V +++
Sbjct: 321 MNEE--LSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 255/521 (48%), Gaps = 51/521 (9%)
Query: 43 SFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCA 102
S S+ N++ +P V + I + + + F+ M V+P+ +T +L
Sbjct: 79 SLSIFRNSEERNPFVL-NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLK--- 134
Query: 103 HYPSPSSVSF---GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQ---- 155
S S + F G +HA K +D D V +L+DMYAK+G + A VF++
Sbjct: 135 ---SNSKLGFRWLGRALHAATLKNFVDC-DSFVRLSLVDMYAKTGQLKHAFQVFEESPDR 190
Query: 156 -------------------------------MGLRNLVSWNTMLDGYMRSGEIEDALQLF 184
M RN SW+T++ GY+ SGE+ A QLF
Sbjct: 191 IKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLF 250
Query: 185 DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXX 244
+ P +N +SWT LI GF + ++ A+ + EM G+ P+ T+
Sbjct: 251 ELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALG 310
Query: 245 XXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGF 304
+H ++ + +K + + +L+DMYA+CG ++ A VF M H+ ++SW ++I G+
Sbjct: 311 SGIRIHGYIL-DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGW 369
Query: 305 AANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPR 364
A +G +A+ F M G +PD V + LTAC ++ +D GL F+ M+ I P
Sbjct: 370 AVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPT 429
Query: 365 IEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLV 424
++HY +VDL RAG+L EA ++++NMP+ P+ +L AC+ AE V + L+
Sbjct: 430 LKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLL 489
Query: 425 ELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGD 484
ELDP +Y+ L +A+ G K R +++ R + G+S IE+D + KF AGD
Sbjct: 490 ELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGD 549
Query: 485 KSHEENGSIYASL-ELLSFELQLCGYVP--DFSDKETYEDD 522
SH+ I L E++S +Q GY P D+S + E++
Sbjct: 550 YSHKLTQEIGLKLDEIISLAIQK-GYNPGADWSIHDIEEEE 589
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 222/446 (49%), Gaps = 37/446 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
VAW S I + G RM P+ TL ++L C+ ++ G +
Sbjct: 275 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR---SRNLLHGKFI 331
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H Y + ++ D+ V +LID+Y K GE
Sbjct: 332 HGYVIRSVVNA-DIYVNCSLIDLYFKC-------------------------------GE 359
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
A +F + A SW +I ++ + +A+E + +M GV PD VT
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H L +++ L+ + + ++L+DMY++CG + A ++F+ + + +VS
Sbjct: 420 CSQLAALEKGKQIH-LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W +I + ++G EAL F+ MQK G +PDGV+ L+AC HAGLIDEGL+ F++M+
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP-MKPNEVVLGSLLAACRTKGEIGL 415
I P IEHY C++D+ RAGRL EA ++I+ P N +L +L +AC E L
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSL 598
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
+++ + LVE P S Y++L N+YA+ WD A +VR MK+ G+RKKPG S IE+
Sbjct: 599 GDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSD 658
Query: 476 SIYKFVAGDKSHEENGSIYASLELLS 501
+ F A D+SH ++Y L LLS
Sbjct: 659 KVCHFFAEDRSHLRAENVYECLALLS 684
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 171/403 (42%), Gaps = 74/403 (18%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
+W + I+ +SG+ +A F RM + EPN+++L +S C+ + G +H
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW---LERGKEIH 231
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
K G ++++ V +AL+DMY K ++ AR
Sbjct: 232 RKCVKKGFELDEY-VNSALVDMYGKCDCLEVAR--------------------------- 263
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
++F + P ++ ++W ++I G+V K K +E M + G P T+
Sbjct: 264 ----EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
++H V+ + + ++ V+ SLID+Y +CG +A VF SW
Sbjct: 320 SRSRNLLHGKFIHGYVI-RSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N +I + + G +A+ ++ M G +PD V++T L ACS +++G +I +
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE 438
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP------------------------- 392
R + L+D+YS+ G +EA + ++P
Sbjct: 439 SRLETDEL-LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 393 ---------MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
+KP+ V L ++L+AC G GL ++ +K+ ++
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSAC---GHAGLIDEGLKFFSQM 537
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 21/274 (7%)
Query: 107 PSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNT 166
P S +F + AY LG + +G + + KSG V ++V ++
Sbjct: 105 PDSFTFPNVIKAYG-ALGREF----LGRMIHTLVVKSGYVC------------DVVVASS 147
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
++ Y + E++LQ+FDE P R+ SW +I F + ++ALE F M+ SG P+
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPN 207
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
V++ +HR + + D V+++L+DMY +C C+E+AR+VF
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY-VNSALVDMYGKCDCLEVAREVF 266
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
M +++V+WNS+I G+ A G + + N M EG P + T L ACS + +
Sbjct: 267 QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLL 326
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGC-LVDLYSRAG 379
G I + +R + + C L+DLY + G
Sbjct: 327 HGKFIHGYV--IRSVVNADIYVNCSLIDLYFKCG 358
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 10/262 (3%)
Query: 156 MGLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAIS-WTALIGGFVKKDHHKQALE 213
+GLR ++V ++++ Y + A +F+ F +R+ + W +L+ G+ K LE
Sbjct: 33 LGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLE 92
Query: 214 CF-REMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDM 272
F R + S PD T +H LV+ + D V V++SL+ M
Sbjct: 93 VFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCD-VVVASSLVGM 151
Query: 273 YARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSY 332
YA+ E + QVFD M R + SWN++I F +G A++AL F M+ GFEP+ VS
Sbjct: 152 YAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSL 211
Query: 333 TGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY--GCLVDLYSRAGRLEEALDVIKN 390
T A++ACS ++ G I K V++ ++ Y LVD+Y + LE A +V +
Sbjct: 212 TVAISACSRLLWLERGKEIHRKC--VKK-GFELDEYVNSALVDMYGKCDCLEVAREVFQK 268
Query: 391 MPMKPNEVVLGSLLAACRTKGE 412
MP K + V S++ KG+
Sbjct: 269 MPRK-SLVAWNSMIKGYVAKGD 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
D +W I+ + G +A + +M V+P+ +T ++L C+ +++
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL---AALE 427
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
G +H + L+ +++ + +AL+DMY+K GN
Sbjct: 428 KGKQIHLSISESRLETDELLL-SALLDMYSKCGNE------------------------- 461
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
++A ++F+ P ++ +SWT +I + ++AL F EMQ G+ PD VT+
Sbjct: 462 ------KEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTL 514
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 217/434 (50%), Gaps = 38/434 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVE--PNNITLITLLSGCAHYPSPSSVSFGA 114
++W + IA +G +A TF M+EA ++ P+ TL +LL C+ S + G
Sbjct: 174 ISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS---STGMIYAGK 230
Query: 115 TVHAYARKLGLDM-NDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
+H + + G + + +L+D+Y K G + SAR
Sbjct: 231 QIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSAR----------------------- 267
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
+ FD+ + ISW++LI G+ ++ +A+ F+ +Q D +
Sbjct: 268 --------KAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSI 319
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+ L + S + V NS++DMY +CG ++ A + F M +
Sbjct: 320 IGVFADFALLRQGKQMQALAVKLPSGLET-SVLNSVVDMYLKCGLVDEAEKCFAEMQLKD 378
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
++SW +I G+ +GL +++ F M + EPD V Y L+ACSH+G+I EG +F+
Sbjct: 379 VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
K+ I PR+EHY C+VDL RAGRL+EA +I MP+KPN + +LL+ CR G+I
Sbjct: 439 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDI 498
Query: 414 GLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEI 473
L ++V K L+ +D +NYV++SN+Y G W+ R +G++K+ G S +EI
Sbjct: 499 ELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEI 558
Query: 474 DSSIYKFVAGDKSH 487
+ ++ F +G+ SH
Sbjct: 559 EREVHFFRSGEDSH 572
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 11/279 (3%)
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
NL++ N ++D Y + E A ++FD P RN +SW+AL+ G V K +L F EM
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G+ P+ T +H + + + V V NSL+DMY++CG I
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL-KIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFE--PDGVSYTGALT 337
A +VF ++ R+++SWN++I GF G +AL F MQ+ + PD + T L
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY-GCLVDLYSRAGRL---EEALDVIKNMPM 393
ACS G+I G +I + R P G LVDLY + G L +A D IK M
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 394 KPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS 432
+ SL+ +GE A + K L EL+ DS
Sbjct: 279 ----ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDS 313
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 176/413 (42%), Gaps = 85/413 (20%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W++ ++ H +G L + S F M + PN T T L C +++ G
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL---NALEKGLQ 128
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H + K+G +M V+VG +L+DMY+K G ++ A VF ++ R+L+SWN M
Sbjct: 129 IHGFCLKIGFEMM-VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM-------- 179
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA--PDYVTVXXX 233
I GFV + +AL+ F MQ + + PD T+
Sbjct: 180 -----------------------IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSL 216
Query: 234 XXXXXXXXXXXXXXWVHR-LVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+H LV + + ++ SL+D+Y +CG + AR+ FD + +
Sbjct: 217 LKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK 276
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
TM+SW+S+I+G+A G EA+ F +Q+ + D + + + + L+ +G
Sbjct: 277 TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG---- 332
Query: 353 NKMKRVRRIAPRIEH------YGCLVDLYSRAGRLEEALDVIKNMPMK------------ 394
K+++ +A ++ +VD+Y + G ++EA M +K
Sbjct: 333 ---KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGY 389
Query: 395 ----------------------PNEVVLGSLLAACRTKGEIGLAEKVMKYLVE 425
P+EV ++L+AC G I E++ L+E
Sbjct: 390 GKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/471 (30%), Positives = 239/471 (50%), Gaps = 43/471 (9%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W + IA + E S F M P+ TL ++ SG A SVS G +H
Sbjct: 59 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSA---GLRSVSIGQQIHG 115
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
Y K GL++ D+ V ++L MY MR+G+++
Sbjct: 116 YTIKYGLEL-DLVVNSSLAHMY-------------------------------MRNGKLQ 143
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
D + PVRN ++W LI G + + L ++ M++SG P+ +T
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
+H + + V V +SLI MY++CGC+ A + F V W+
Sbjct: 204 DLAIRGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWS 262
Query: 299 SIIVGFAANGLADEALSFFNSM-QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
S+I + +G DEA+ FN+M ++ E + V++ L ACSH+GL D+GL +F+ M
Sbjct: 263 SMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 322
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
P ++HY C+VDL RAG L++A +I++MP+K + V+ +LL+AC +A+
Sbjct: 323 KYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQ 382
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSI 477
+V K ++++DP + YVLL+N++A+ +W ++VR++M+D+ ++K+ G S E +
Sbjct: 383 RVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEV 442
Query: 478 YKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS------DKETYEDD 522
++F GD+S ++ IY+ L+ L+ E++L GY PD + D+E E D
Sbjct: 443 HQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESD 493
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 39/358 (10%)
Query: 137 IDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWT 196
+ MY+K G+ SA V+ +M +N +S N +++GY+R+G++ +A ++FDE P R +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
A+I G ++ + +++ L FREM G +PD T+ +H + +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI-K 119
Query: 257 DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSF 316
L+ ++ V++SL MY R G ++ V M R +V+WN++I+G A NG + L
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 317 FNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRV---------RRIAPRIEH 367
+ M+ G P+ +++ L++CS + +G +I + ++ +
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 368 YGCLVD---------------------LYSRAGRLEEALDVIKNMP----MKPNEVVLGS 402
GCL D Y G+ +EA+++ M M+ NEV +
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 403 LLAACRTKGEIGLAEKVMKYLVE---LDPGGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
LL AC G ++ +VE P G +Y + ++ G D A + R+M
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKP-GLKHYTCVVDLLGRAGCLDQAEAIIRSM 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
VAW + I + ++G + M+ + PN IT +T+LS C+ G +
Sbjct: 158 VAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ---GQQI 214
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA A K+G V ++LI MY+K G + A F + + V W++M+ Y G+
Sbjct: 215 HAEAIKIGASSVVAVV-SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ 273
Query: 177 IEDALQLFD 185
++A++LF+
Sbjct: 274 GDEAIELFN 282
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 215/415 (51%), Gaps = 38/415 (9%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
+W I RSG ++ F+RM RE+ V P++ TL +L C+ S G +
Sbjct: 100 SWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKS---GDLI 156
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H KLG + + V +AL+ MY G + AR
Sbjct: 157 HVLCLKLGFS-SSLFVSSALVIMYVDMGKLLHAR-------------------------- 189
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+LFD+ PVR+++ +TA+ GG+V++ L FREM SG A D V +
Sbjct: 190 -----KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
VH + + S + + N++ DMY +C ++ A VF M R ++S
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCL-GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W+S+I+G+ +G + F+ M KEG EP+ V++ G L+AC+H GL+++ F M+
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ 363
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
I P ++HY + D SRAG LEEA +++MP+KP+E V+G++L+ C+ G + +
Sbjct: 364 EYN-IVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
E+V + L++L P S YV L+ +Y+A G++D A +R+ MK++ I K PG SSI
Sbjct: 423 ERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 8/266 (3%)
Query: 180 ALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXXXXXXX 238
+L +F P RN SW +IG F + ++++ F M + S V PD T+
Sbjct: 86 SLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACS 145
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
+H L + + ++ VS++L+ MY G + AR++FD M R V +
Sbjct: 146 ASREAKSGDLIHVLCL-KLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYT 204
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRV 358
++ G+ G A L+ F M GF D V L AC G + G + +
Sbjct: 205 AMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWC--I 262
Query: 359 RRIAPRIEHYG-CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
RR + + G + D+Y + L+ A V NM + + + SL+ G++ ++
Sbjct: 263 RRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS-RRDVISWSSLILGYGLDGDVVMSF 321
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAA 443
K+ + L G + N V + +A
Sbjct: 322 KLFDEM--LKEGIEPNAVTFLGVLSA 345
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 130/334 (38%), Gaps = 82/334 (24%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V +T+ + + G+ + + F M + +++ +++LL C ++ G +
Sbjct: 200 SVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQL---GALKHGKS 256
Query: 116 VHAYARK----LGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
VH + + LGL++ G A+ DMY K +D A VF M R+++SW++++ GY
Sbjct: 257 VHGWCIRRCSCLGLNL-----GNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGY 311
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
G++ + +LFD EM G+ P+ VT
Sbjct: 312 GLDGDVVMSFKLFD-------------------------------EMLKEGIEPNAVTF- 339
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
W++ +M + ++ ++ S+ D +R G +E A + + M
Sbjct: 340 LGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM-- 397
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
+PD L+ C G ++ G R+
Sbjct: 398 --------------------------------PVKPDEAVMGAVLSGCKVYGNVEVGERV 425
Query: 352 FNKMKRVRRIAPR-IEHYGCLVDLYSRAGRLEEA 384
++ +++ PR +Y L LYS AGR +EA
Sbjct: 426 ARELIQLK---PRKASYYVTLAGLYSAAGRFDEA 456
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/492 (30%), Positives = 243/492 (49%), Gaps = 51/492 (10%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
T WT+ I+ +G +A F +M A V PN +T+++ +S C+ ++
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS---CLKVINQ 370
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---------------- 156
G+ VH+ A K+G ++DV VG +L+DMY+K G ++ AR VFD +
Sbjct: 371 GSEVHSIAVKMGF-IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYC 429
Query: 157 ------------------GLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFP-----VRNA 192
LR N+++WNTM+ GY+++G+ +A+ LF RN
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNT 489
Query: 193 ISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRL 252
+W +I G+++ +ALE FR+MQ S P+ VT+ +H
Sbjct: 490 ATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGC 549
Query: 253 VMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADE 312
V+ ++ L V N+L D YA+ G IE +R +F GM + +++WNS+I G+ +G
Sbjct: 550 VLRRN-LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGP 608
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
AL+ FN M+ +G P+ + + + A G +DEG ++F + I P +EH +V
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMV 668
Query: 373 DLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS 432
LY RA RLEEAL I+ M ++ + S L CR G+I +A + L L+P +
Sbjct: 669 YLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTA 728
Query: 433 NYVLLSNIY---AAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEE 489
++S IY A +G+ NK RR D ++K G S IE+ + I+ F GD+S
Sbjct: 729 TESIVSQIYALGAKLGRSLEGNKPRR---DNLLKKPLGQSWIEVRNLIHTFTTGDQSKLC 785
Query: 490 NGSIYASLELLS 501
+Y +E +S
Sbjct: 786 TDVLYPLVEKMS 797
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 185/392 (47%), Gaps = 47/392 (11%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
W++ I + R + E A F M + V P++ +L GCA+ V G +H
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN---CGDVEAGKVIH 204
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
+ KLG+ + ++V +++ +YAK G +D A F +M R++++WN++L Y ++G+
Sbjct: 205 SVVIKLGMS-SCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKH 263
Query: 178 EDALQLFDEFP---------------------------------------VRNAISWTAL 198
E+A++L E + +WTA+
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM 323
Query: 199 IGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDS 258
I G + QAL+ FR+M L+GV P+ VT+ VH + +
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 259 LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFN 318
+ D+V V NSL+DMY++CG +E AR+VFD + ++ + +WNS+I G+ G +A F
Sbjct: 384 I-DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 319 SMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
MQ P+ +++ ++ G E + +F +M++ ++ + ++ Y +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 379 GRLEEALDVIKNMPMK---PNEVVLGSLLAAC 407
G+ +EAL++ + M PN V + SLL AC
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 192/443 (43%), Gaps = 55/443 (12%)
Query: 28 QANPTFSPYNPNTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEV 87
+ +P P + N SF TK +P + + CR+G L+EA + +
Sbjct: 23 ENSPELHPKSRKKNLSF-----TKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGS 77
Query: 88 EPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMN-DVKVGTALIDMYAKSGNV 146
+ T + LL C S+ G +HA + GL DV V T L+ MYAK G
Sbjct: 78 KVKRSTYLKLLESCI---DSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGC- 130
Query: 147 DSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKD 206
I DA ++FD RN +W+A+IG + +++
Sbjct: 131 ------------------------------IADARKVFDSMRERNLFTWSAMIGAYSREN 160
Query: 207 HHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVS 266
++ + FR M GV PD +H +V+ + + +RVS
Sbjct: 161 RWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVI-KLGMSSCLRVS 219
Query: 267 NSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFE 326
NS++ +YA+CG ++ A + F M R +++WNS+++ + NG +EA+ M+KEG
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 327 PDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALD 386
P V++ + + G D + + KM+ I + + ++ G +ALD
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETF-GITADVFTWTAMISGLIHNGMRYQALD 338
Query: 387 VIKNMPMK---PNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSN---- 439
+ + M + PN V + S ++AC I +V V++ G + VL+ N
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM---GFIDDVLVGNSLVD 395
Query: 440 IYAAVGKWDGANKVRRAMKDRGI 462
+Y+ GK + A KV ++K++ +
Sbjct: 396 MYSKCGKLEDARKVFDSVKNKDV 418
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 33/261 (12%)
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
+V V L+ MYA+CGCI AR+VFD M R + +W+++I ++ E F M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCL------VDLY 375
K+G PD + L C++ G ++ G K + + ++ CL + +Y
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAG-------KVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 376 SRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV 435
++ G L+ A + M + LLA C+ G E+ ++ + E++ G S +
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN----GKHEEAVELVKEMEKEGISPGL 282
Query: 436 LLSNI----YAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENG 491
+ NI Y +GK D A + + M+ G I + ++ + A NG
Sbjct: 283 VTWNILIGGYNQLGKCDAAMDLMQKMETFG-----------ITADVFTWTAMISGLIHNG 331
Query: 492 SIYASLELLSFELQLCGYVPD 512
Y +L++ ++ L G VP+
Sbjct: 332 MRYQALDMFR-KMFLAGVVPN 351
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 220/434 (50%), Gaps = 37/434 (8%)
Query: 81 RMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMY 140
+M + P++ L + CA S G +VH + K G D DV VG++L+DMY
Sbjct: 106 KMMAGNLRPDDHVLPSATKSCAIL---SRCDIGRSVHCLSMKTGYDA-DVFVGSSLVDMY 161
Query: 141 AKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIG 200
AK G EI A ++FDE P RN ++W+ ++
Sbjct: 162 AKCG-------------------------------EIVYARKMFDEMPQRNVVTWSGMMY 190
Query: 201 GFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLK 260
G+ + +++AL F+E +A + + +H L +
Sbjct: 191 GYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDS 250
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM 320
+ V +SL+ +Y++CG E A QVF+ + + + WN+++ +A + + + F M
Sbjct: 251 -SSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
Query: 321 QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
+ G +P+ +++ L ACSHAGL+DEG F++MK RI P +HY LVD+ RAGR
Sbjct: 310 KLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE-SRIEPTDKHYASLVDMLGRAGR 368
Query: 381 LEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNI 440
L+EAL+VI NMP+ P E V G+LL +C LA + EL P ++ LSN
Sbjct: 369 LQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNA 428
Query: 441 YAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELL 500
YAA G+++ A K R+ ++DRG +K+ G S +E + ++ F AG++ HE++ IY L L
Sbjct: 429 YAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Query: 501 SFELQLCGYVPDFS 514
E++ GY+ D S
Sbjct: 489 GEEMEKAGYIADTS 502
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 7/280 (2%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N +++ Y +S D+ + F++ P +++ +W+++I F + + +LE ++M +
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
PD + VH L M + +V V +SL+DMYA+CG I AR+
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSM-KTGYDADVFVGSSLVDMYAKCGEIVYARK 172
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
+FD M R +V+W+ ++ G+A G +EAL F E + S++ ++ C+++ L
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTL 232
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
++ G +I + + LV LYS+ G E A V +P+K LG
Sbjct: 233 LELGRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKN----LGIWN 287
Query: 405 AACRTKGEIGLAEKVMKYLVELDPGG-DSNYVLLSNIYAA 443
A + + +KV++ + G N++ N+ A
Sbjct: 288 AMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 100/248 (40%), Gaps = 37/248 (14%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W+ + + + G+ EA F + N+ + +++S CA + + + G
Sbjct: 182 VVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCA---NSTLLELGRQ 238
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H + K D + ++L+ +Y+K G + A VF+++ ++NL WN ML Y
Sbjct: 239 IHGLSIKSSFDSSSFVG-SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAY---- 293
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ H ++ +E F+ M+LSG+ P+++T
Sbjct: 294 ---------------------------AQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-LHRTM 294
+ M + ++ + SL+DM R G ++ A +V M + T
Sbjct: 327 ACSHAGLVDEGRYYFD-QMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTE 385
Query: 295 VSWNSIIV 302
W +++
Sbjct: 386 SVWGALLT 393
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 223/479 (46%), Gaps = 67/479 (13%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
T W I + E S +RM R P+ T ++ C++ V G+
Sbjct: 74 TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN---NGQVRVGS 130
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAK-------------------------------S 143
+VH ++G D DV VGT+ +D Y K S
Sbjct: 131 SVHGLVLRIGFD-KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKS 189
Query: 144 GNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAIS--------- 194
G ++ A+ +FD M RNL SWN ++DG ++SG++ +A +LFDE P R+ IS
Sbjct: 190 GELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYA 249
Query: 195 ----------------------WTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
W+ALI G+ + +A + F EM V PD +
Sbjct: 250 KGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVG 309
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
V + + + + V +LIDM A+CG ++ A ++F+ M R
Sbjct: 310 LMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR 369
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+VS+ S++ G A +G EA+ F M EG PD V++T L C + L++EGLR F
Sbjct: 370 DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYF 429
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
M++ I +HY C+V+L SR G+L+EA ++IK+MP + + GSLL C G
Sbjct: 430 ELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGN 489
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+AE V ++L EL+P +YVLLSNIYAA+ +W +R M + GI K G S I
Sbjct: 490 TEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 126/313 (40%), Gaps = 39/313 (12%)
Query: 183 LFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA-PDYVTVXXXXXXXXXXX 241
+F+ P W LI G+ K + + M +G+A PD T
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 242 XXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSII 301
VH LV+ KD V V S +D Y +C + AR+VF M R VSW +++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKD-VVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 302 VGFAANGLADEALSFFNSMQKEGF---------------------------EPDGVSYTG 334
V + +G +EA S F+ M + + D +SYT
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 335 ALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM--- 391
+ + G + +F + + V + + L+ Y++ G+ EA V M
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGV-----DVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 392 PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL--LSNIYAAVGKWDG 449
+KP+E ++ L++AC G L EKV YL + S+YV+ L ++ A G D
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDR 358
Query: 450 ANKVRRAMKDRGI 462
A K+ M R +
Sbjct: 359 AAKLFEEMPQRDL 371
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 215/422 (50%), Gaps = 38/422 (9%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
H D V WT+ I + +G + EA S F +M+ E++PN +T+ ++LSGC ++
Sbjct: 305 HVD-LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI---ENLE 360
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
G +VH + K+G+ D V AL+ MYAK A+ VF
Sbjct: 361 LGRSVHGLSIKVGI--WDTNVANALVHMYAKCYQNRDAKYVF------------------ 400
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
E+E ++ ++W ++I GF + +AL F M V P+ VTV
Sbjct: 401 ----EMESE---------KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVA 447
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSL-KDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H + L +V V +L+D YA+CG + AR +FD +
Sbjct: 448 SLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE 507
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ ++W+++I G+ G +L F M K+ +P+ ++T L+AC H G+++EG +
Sbjct: 508 EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKK 567
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
F+ M + P +HY C+VD+ +RAG LE+ALD+I+ MP++P+ G+ L C
Sbjct: 568 YFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMH 627
Query: 411 GEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
L E V+K +++L P S YVL+SN+YA+ G+W+ A +VR MK RG+ K G S+
Sbjct: 628 SRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHST 687
Query: 471 IE 472
+E
Sbjct: 688 ME 689
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 168/403 (41%), Gaps = 75/403 (18%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V WTS IA + ++ E F RMRE V N T TL+ C S++ G
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKL---SALHQGKW 263
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
H K G++++ V T+L+DMY K G
Sbjct: 264 FHGCLVKSGIELSSCLV-TSLLDMYVKC-------------------------------G 291
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+I +A ++F+E + + WTA+I G+ +AL F++M+ + P+ VT+
Sbjct: 292 DISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLS 351
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH L + NV +N+L+ MYA+C A+ VF+ + +V
Sbjct: 352 GCGLIENLELGRSVHGLSIKVGIWDTNV--ANALVHMYAKCYQNRDAKYVFEMESEKDIV 409
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+WNSII GF+ NG EAL F+ M E P+GV+ +AC+ G + G +
Sbjct: 410 AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 356 KRVRRIAPRIEHYG-CLVDLYSRAG----------RLEE--------------------- 383
++ +A H G L+D Y++ G +EE
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIG 529
Query: 384 ALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
+L++ + M KPNE S+L+AC G G+ + KY
Sbjct: 530 SLELFEEMLKKQQKPNESTFTSILSAC---GHTGMVNEGKKYF 569
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 162/403 (40%), Gaps = 75/403 (18%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W + +C + + VE + + + ++I L C + G +H
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDN---GKKIHC 166
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
K+ D V T L+DMYAK G + SA VF+ + LRN+V W +M+ GY+++ E
Sbjct: 167 QLVKV--PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
+ L LF+ N + G + AL
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH------------------------- 259
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
W H + + ++ + + SL+DMY +CG I AR+VF+ H +V W
Sbjct: 260 ------QGKWFHG-CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWT 312
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID--------EGLR 350
++IVG+ NG +EALS F M+ +P+ V+ L+ C GLI+ GL
Sbjct: 313 AMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIENLELGRSVHGLS 369
Query: 351 I----------------FNKMKRVRRIAPRIEH--------YGCLVDLYSRAGRLEEALD 386
I + K + R E + ++ +S+ G + EAL
Sbjct: 370 IKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALF 429
Query: 387 VIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
+ M + PN V + SL +AC + G + + + Y V+L
Sbjct: 430 LFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKL 472
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 131/314 (41%), Gaps = 66/314 (21%)
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDE 186
M D+ + T L+ +Y G ARLVFDQ+ + W ML Y + E + ++L+D
Sbjct: 73 MGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYD- 131
Query: 187 FPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
+++ + ++ +AL+ E+Q
Sbjct: 132 LLMKHGFRYDDIV--------FSKALKACTELQ----------------------DLDNG 161
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAA 306
+H ++ S DNV V L+DMYA+CG I+ A +VF+ + R +V W S+I G+
Sbjct: 162 KKIHCQLVKVPSF-DNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVK 219
Query: 307 NGLADEALSFFNSMQKEGFEPDGVSYTGALTACS-----------HAGLIDEGLRI---- 351
N L +E L FN M++ + +Y + AC+ H L+ G+ +
Sbjct: 220 NDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCL 279
Query: 352 ----------FNKMKRVRRIAPRIEH-----YGCLVDLYSRAGRLEEALDVIKNMP---M 393
+ RR+ H + ++ Y+ G + EAL + + M +
Sbjct: 280 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 394 KPNEVVLGSLLAAC 407
KPN V + S+L+ C
Sbjct: 340 KPNCVTIASVLSGC 353
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 214/419 (51%), Gaps = 6/419 (1%)
Query: 51 KHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSV 110
K + W S I+ + + +EA F MR E ++ TL +++ C +
Sbjct: 279 KSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINACI---GLGFL 334
Query: 111 SFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDG 170
G +H +A K GL ++D+ V + L+DMY+K G+ A +F ++ + + N+M+
Sbjct: 335 ETGKQMHCHACKFGL-IDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKV 393
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
Y G I+DA ++F+ ++ ISW ++ GF + + LE F +M + D V++
Sbjct: 394 YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSL 453
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
V D V VS+SLID+Y +CG +E R+VFD M+
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQV-VSSSLIDLYCKCGFVEHGRRVFDTMV 512
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
V WNS+I G+A NG EA+ F M G P +++ LTAC++ GL++EG +
Sbjct: 513 KSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRK 572
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
+F MK P EH+ C+VDL +RAG +EEA+++++ MP + + S+L C
Sbjct: 573 LFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVAN 632
Query: 411 GEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
G + +K + ++EL+P YV LS I+A G W+ + VR+ M++ + K PG S
Sbjct: 633 GYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 169/361 (46%), Gaps = 39/361 (10%)
Query: 83 REAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAK 142
+E + ITL T+L CA + + G +HA G++ D K+ ++L+++YAK
Sbjct: 179 KELNFSADAITLTTVLKACAELEA---LKCGKQIHAQILIGGVEC-DSKMNSSLVNVYAK 234
Query: 143 SGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGF 202
G++ A + +Q+ + S + ++ GY G + ++ LFD R I W ++I G+
Sbjct: 235 CGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY 294
Query: 203 VKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDN 262
+ + +AL F EM+ + D T+ +H + L D+
Sbjct: 295 IANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMH-CHACKFGLIDD 352
Query: 263 VRVSNSLIDMYARCGC-------------------------------IEIARQVFDGMLH 291
+ V+++L+DMY++CG I+ A++VF+ + +
Sbjct: 353 IVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIEN 412
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
++++SWNS+ GF+ NG E L +F+ M K D VS + ++AC+ ++ G ++
Sbjct: 413 KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV 472
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
F + V + ++ L+DLY + G +E V M +K +EV S+++ T G
Sbjct: 473 FARATIVGLDSDQVVS-SSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Query: 412 E 412
+
Sbjct: 531 Q 531
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 158/362 (43%), Gaps = 69/362 (19%)
Query: 122 KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTML------------- 168
K G + V V L+ MY++SG + AR +FD+M RN SWNTM+
Sbjct: 54 KKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSL 113
Query: 169 ------------------DGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQ 210
G+ ++GE+ A +LF+ P ++ ++ +L+ G++ + ++
Sbjct: 114 RFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEE 173
Query: 211 ALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLI 270
AL F+E+ S D +T+ +H ++ ++ + ++++SL+
Sbjct: 174 ALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQILI-GGVECDSKMNSSLV 229
Query: 271 DMYARCGCIEIA-------------------------------RQVFDGMLHRTMVSWNS 299
++YA+CG + +A R +FD +R ++ WNS
Sbjct: 230 NVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNS 289
Query: 300 IIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVR 359
+I G+ AN + EAL FN M+ E E D + + AC G ++ G ++ +
Sbjct: 290 MISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFG 348
Query: 360 RIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKV 419
I I L+D+YS+ G EA + + + ++L S++ + G I A++V
Sbjct: 349 LI-DDIVVASTLLDMYSKCGSPMEACKLFSEVE-SYDTILLNSMIKVYFSCGRIDDAKRV 406
Query: 420 MK 421
+
Sbjct: 407 FE 408
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 252 LVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLAD 311
L++ + L V V+N L+ MY+R G + IAR +FD M R SWN++I G+ +G
Sbjct: 51 LLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKG 110
Query: 312 EALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCL 371
+L FF+ M E DG S+ ++ + AG + R+FN M + +G +
Sbjct: 111 TSLRFFDMMP----ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYI 166
Query: 372 VDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL----VELD 427
++ Y+ EEAL + K + + + L ++L AC + +++ + VE D
Sbjct: 167 LNGYA-----EEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECD 221
Query: 428 PGGDSNYVLLSNIYAAVG 445
+S+ V N+YA G
Sbjct: 222 SKMNSSLV---NVYAKCG 236
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 216/419 (51%), Gaps = 9/419 (2%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + I R QL EA + M ++P+ + ++ LLS A S G +
Sbjct: 271 VSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSK---GLQL 327
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H K G D D T +I YA S ++ A F+ ++ S N ++ G++++G
Sbjct: 328 HGTIVKRGFDCYDFLQAT-IIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGM 386
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXXXX 235
+E A ++FD+ ++ SW A+I G+ + + AL FREM S V PD +T+
Sbjct: 387 VEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFS 446
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF---DGMLHR 292
H + ++ N ++ ++IDMYA+CG IE A +F +
Sbjct: 447 AISSLGSLEEGKRAHDY-LNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSS 505
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
T+ WN+II G A +G A AL ++ +Q +P+ +++ G L+AC HAGL++ G F
Sbjct: 506 TISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYF 565
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
MK I P I+HYGC+VDL +AGRLEEA ++IK MP+K + ++ G LL+A RT G
Sbjct: 566 ESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 625
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+ +AE L +DP V+LSN+YA G+W+ VR M+ R + FS +
Sbjct: 626 VEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 189/429 (44%), Gaps = 73/429 (17%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V++T+ I + ++ Q EA F MR + N +TL T++S C+H +
Sbjct: 139 VSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRM---L 195
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
+ A KL L+ V V T L+ MY + AR +FD+M RNLV+WN ML+GY ++G
Sbjct: 196 QSLAIKLKLE-GRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGL 254
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
IE A +LFD+ ++ +SW +I G ++K+ +AL + EM G+ P V +
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 314
Query: 237 XXXXXXXXXXXWVH----------------------------RLVMTQ--DSLKDNVRVS 266
+H +L + Q S+KD++
Sbjct: 315 SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASR 374
Query: 267 NSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM-QKEGF 325
N+LI + + G +E AR+VFD + + SWN++I G+A + AL F M
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 326 EPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL 385
+PD ++ +A S G ++EG R + + I P ++D+Y++ G +E AL
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLN-FSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 386 DV-------------------------------------IKNMPMKPNEVVLGSLLAACR 408
++ ++++P+KPN + +L+AC
Sbjct: 494 NIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 553
Query: 409 TKGEIGLAE 417
G + L +
Sbjct: 554 HAGLVELGK 562
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 146/287 (50%), Gaps = 13/287 (4%)
Query: 94 LITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVF 153
L++ L CA S + V+ G +H K GLD N + ++++MYAK + A VF
Sbjct: 44 LVSALGSCA---SSNDVTCGRQIHCRVLKSGLDSNGY-ICNSVLNMYAKCRLLADAESVF 99
Query: 154 DQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALE 213
+ S+N M+DGY+RS + DAL+LFD P R+ +S+T LI G+ + + +A+E
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 214 CFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMY 273
FREM+ G+ + VT+ + L + + L+ V VS +L+ MY
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAI-KLKLEGRVFVSTNLLHMY 218
Query: 274 ARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYT 333
C C++ AR++FD M R +V+WN ++ G++ GL ++A F+ + E D VS+
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT----EKDIVSWG 274
Query: 334 GALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
+ C +DE L + +M R + +VDL S + R
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVM----MVDLLSASAR 317
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 237/467 (50%), Gaps = 43/467 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V T+ I + + G+ EA F M +V+PN T ++L C
Sbjct: 232 VVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG------------- 278
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
++ D+ G + + KSG +SA L S ++L Y+R
Sbjct: 279 ----------NLKDIGNGKLIHGLMVKSG-FESA-----------LASQTSLLTMYLRCS 316
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++D+L++F N +SWT+LI G V+ + AL FR+M + P+ T+
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H +V T+ + + LID+Y +CGC ++AR VFD + ++
Sbjct: 377 GCSNLAMFEEGRQIHGIV-TKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVI 435
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
S N++I +A NG EAL F M G +P+ V+ L AC+++ L++EG +F+
Sbjct: 436 SLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF 495
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
++ +I +HY C+VDL RAGRLEEA +++ + P+ V+ +LL+AC+ ++ +
Sbjct: 496 RK-DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEM 553
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
AE++ + ++E++PG + +L+SN+YA+ GKW+ +++ MKD ++K P S +EI+
Sbjct: 554 AERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINK 613
Query: 476 SIYKFVAGDK-SHEENGSIYASLELLSFELQLCGYVPD----FSDKE 517
+ F+AGD SH + I +LE L + + GYV D F D E
Sbjct: 614 ETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDME 660
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 159/385 (41%), Gaps = 70/385 (18%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V W S IA+ + + EA + M V P+ TL ++ + S
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA---FSDLSLEKEAQRS 187
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H A LGL++++V VG+AL+DMY K G A+LV D++ +++V ++ GY + GE
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+A++ F+ M + V P+ T
Sbjct: 248 -------------------------------DTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H L M + + + SL+ MY RC ++ + +VF + + VS
Sbjct: 277 CGNLKDIGNGKLIHGL-MVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS 335
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W S+I G NG + AL F M ++ +P+ + + AL CS+ + +EG +I +
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 357 RVRRIAPRIEHYGCLVDLYSRAG-----RL--------------------------EEAL 385
+ + G L+DLY + G RL EAL
Sbjct: 396 KYGFDRDKYAGSG-LIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREAL 454
Query: 386 DVIK---NMPMKPNEVVLGSLLAAC 407
D+ + N+ ++PN+V + S+L AC
Sbjct: 455 DLFERMINLGLQPNDVTVLSVLLAC 479
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 6/264 (2%)
Query: 162 VSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS 221
+S + ++D ++ G+I+ A Q+FD R+ ++W +LI +K K+A+E +R M +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 222 GVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEI 281
V PD T+ H L + NV V ++L+DMY + G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 282 ARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
A+ V D + + +V ++IVG++ G EA+ F SM E +P+ +Y L +C +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 342 AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLG 401
I G I M + + L+ +Y R ++++L V K + PN+V
Sbjct: 280 LKDIGNGKLIHGLMVK-SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWT 337
Query: 402 SLLAACRTKG--EIGLAE--KVMK 421
SL++ G E+ L E K+M+
Sbjct: 338 SLISGLVQNGREEMALIEFRKMMR 361
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 222/459 (48%), Gaps = 39/459 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
++WT+ I ++ + EA F M ++ + +++ CA+ P+ G
Sbjct: 190 VISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA---FHMGIQ 246
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH KLG + + V +LI YA + +R
Sbjct: 247 VHGLIIKLGF-LYEEYVSASLITFYANCKRIGDSR------------------------- 280
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++FDE WTAL+ G+ H+ AL F M + + P+ T
Sbjct: 281 ------KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H V + L+ + V NSL+ MY+ G + A VF + +++V
Sbjct: 335 SCSALGTLDWGKEMHG-VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIV 393
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWNSIIVG A +G A F M + EPD +++TG L+ACSH G +++G ++F M
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 356 KR-VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
+ I +I+HY C+VD+ R G+L+EA ++I+ M +KPNE+V +LL+ACR ++
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 513
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
EK + LD + YVLLSNIYA+ G+W +K+R MK GI KKPG S + I
Sbjct: 514 RGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIR 573
Query: 475 SSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDF 513
++F +GD+ H IY LE L +L+ GY PD+
Sbjct: 574 GKKHEFFSGDQPH--CSRIYEKLEFLREKLKELGYAPDY 610
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 179/381 (46%), Gaps = 31/381 (8%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
+T I + RS +LV+A + F M +V N +++SGC ++
Sbjct: 69 YTKMITGYTRSNRLVDALNLFDEMPVRDVVSWN----SMISGCVECGDMNT--------- 115
Query: 119 YARKLGLDMNDVKV--GTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
A KL +M + V TA+++ +SG VD A +F QM +++ +WN+M+ GY++ G+
Sbjct: 116 -AVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGK 174
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
++DAL+LF + P +N ISWT +I G + + +AL+ F+ M +
Sbjct: 175 VDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITA 234
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
VH L++ L + VS SLI YA C I +R+VFD +H +
Sbjct: 235 CANAPAFHMGIQVHGLIIKLGFLYEEY-VSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W +++ G++ N ++ALS F+ M + P+ ++ L +CS G +D G K
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG-------K 346
Query: 357 RVRRIAPRIEHY------GCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
+ +A ++ LV +YS +G + +A+ V + K + V S++ C
Sbjct: 347 EMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQH 405
Query: 411 GEIGLAEKVMKYLVELDPGGD 431
G A + ++ L+ D
Sbjct: 406 GRGKWAFVIFGQMIRLNKEPD 426
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 73/336 (21%)
Query: 130 VKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPV 189
V + T +I Y +S + A +FD+M +R++VSWN+M+ G + G++ A++LFDE P
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 190 RNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWV 249
R+ +SWTA++ G + QA F +M + A W
Sbjct: 126 RSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAA----------------------W- 162
Query: 250 HRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGL 309
NS++ Y + G ++ A ++F M + ++SW ++I G N
Sbjct: 163 -----------------NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNER 205
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACS-----HAGLIDEGLRI------------- 351
+ EAL F +M + + +T +TAC+ H G+ GL I
Sbjct: 206 SGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSAS 265
Query: 352 ----FNKMKRV--------RRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPN 396
+ KR+ ++ ++ + L+ YS + E+AL + M + PN
Sbjct: 266 LITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPN 325
Query: 397 EVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS 432
+ S L +C G + +++ V+L D+
Sbjct: 326 QSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDA 361
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 54 DPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
+ WT+ ++ + + + +A S F M + PN T + L+ C+ + ++ +G
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS---ALGTLDWG 345
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
+H A KLGL+ D VG +L+ MY+ SGNV+ A VF ++ +++VSWN+++ G +
Sbjct: 346 KEMHGVAVKLGLE-TDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQ 404
Query: 174 SGEIEDALQLFDEFPVRNA----ISWTALIG-----GFVKK 205
G + A +F + N I++T L+ GF++K
Sbjct: 405 HGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK 445
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
+V + +I Y R + A +FD M R +VSWNS+I G G + A+ F+ M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL 381
E VS+T + C +G +D+ R+F +M V+ A + +V Y + G++
Sbjct: 125 ----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMP-VKDTAA----WNSMVHGYLQFGKV 175
Query: 382 EEALDVIKNMPMK 394
++AL + K MP K
Sbjct: 176 DDALKLFKQMPGK 188
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 222/461 (48%), Gaps = 43/461 (9%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRM--REAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
V WT+ I G + + +M AEV P IT+ S S SV+ G
Sbjct: 179 VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA-----SIDSVTTGK 233
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+HA K G NL N++LD Y R
Sbjct: 234 QIHASVIKRGFQ--------------------------------SNLPVMNSILDLYCRC 261
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G + +A F E ++ I+W LI + D +AL F+ + G P+ T
Sbjct: 262 GYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLV 320
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML-HRT 293
+H + + NV ++N+LIDMYA+CG I +++VF ++ R
Sbjct: 321 AACANIAALNCGQQLHGRIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+VSW S+++G+ ++G EA+ F+ M G PD + + L+AC HAGL+++GL+ FN
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN 439
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
M+ I P + Y C+VDL RAG++ EA ++++ MP KP+E G++L AC+
Sbjct: 440 VMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHN 499
Query: 414 GLAEKV-MKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
GL ++ + ++EL P YV+LS IYAA GKW +VR+ M+ G +K+ G S I
Sbjct: 500 GLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWIL 559
Query: 473 IDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDF 513
+++ ++ F DK S+Y+ L LL E + GYVP+
Sbjct: 560 VENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPEL 600
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 171/405 (42%), Gaps = 79/405 (19%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
VAWT+ I + S A F M + PN TL ++L C + +++GA
Sbjct: 76 VVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNM---KVLAYGAL 132
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH KLG++ + V A+++MYA S
Sbjct: 133 VHGVVVKLGME-GSLYVDNAMMNMYATC------------------------------SV 161
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG--VAPDYVTVXXX 233
+E A +F + V+N ++WT LI GF L+ +++M L V P +T+
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+H V+ + + N+ V NS++D+Y RCG + A+ F M +
Sbjct: 222 ASASIDSVTTGKQ--IHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKD 278
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+++WN++I + + EAL F + +GF P+ ++T + AC++ ++ G ++
Sbjct: 279 LITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRL-------------------------------- 381
++ R R +E L+D+Y++ G +
Sbjct: 338 RIFR-RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 382 EEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
EA+++ M ++P+ +V ++L+ACR GL EK +KY
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLSACR---HAGLVEKGLKYF 438
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
++ Y G +E+A LFDE P R+ ++WTA+I G+ +++ +A ECF EM G +P+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGC-IEIARQV 285
T+ VH +V+ + ++ ++ V N++++MYA C +E A +
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVV-KLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
F + + V+W ++I GF G L + M E E T A+ A + +
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSV 229
Query: 346 DEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
G +I + + R + ++DLY R G L EA
Sbjct: 230 TTGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEA 267
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%)
Query: 265 VSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG 324
++ +LI Y G +E AR +FD M R +V+W ++I G+A++ A F+ M K+G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 325 FEPDGVSYTGALTACSHAGLIDEG 348
P+ + + L +C + ++ G
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYG 130
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 215/434 (49%), Gaps = 36/434 (8%)
Query: 79 FVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALID 138
F MR V PN++T ++ L+ C+ + G +HA K G++ +++ + +AL+D
Sbjct: 244 FSLMRRGLVHPNSVTYLSALAACS---GSQRIVEGQQIHALLWKYGIE-SELCIESALMD 299
Query: 139 MYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTAL 198
MY+K G+ IEDA +F+ + +S T +
Sbjct: 300 MYSKCGS-------------------------------IEDAWTIFESTTEVDEVSMTVI 328
Query: 199 IGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDS 258
+ G + ++A++ F M +GV D V +H LV+ +
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKR-K 387
Query: 259 LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFN 318
N V+N LI+MY++CG + ++ VF M R VSWNS+I FA +G AL +
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYE 447
Query: 319 SMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
M +P V++ L ACSH GLID+G + N+MK V I PR EHY C++D+ RA
Sbjct: 448 EMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRA 507
Query: 379 GRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLS 438
G L+EA I ++P+KP+ + +LL AC G+ + E + L + P S ++L++
Sbjct: 508 GLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIA 567
Query: 439 NIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLE 498
NIY++ GKW K + MK G+ K+ G SSIEI+ + FV DK H + +IY L
Sbjct: 568 NIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLS 627
Query: 499 LLSFELQLCGYVPD 512
L + GY PD
Sbjct: 628 GLFPVMVDEGYRPD 641
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 11/281 (3%)
Query: 159 RN-LVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFRE 217
RN LV WN++L Y + G++ DA++LFDE P+R+ IS + GF++ + +
Sbjct: 87 RNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKR 146
Query: 218 MQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG 277
M SG D+ T+ +H L + K+ + V N LI Y +CG
Sbjct: 147 MLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKE-ISVGNKLITSYFKCG 204
Query: 278 CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALT 337
C R VFDGM HR +++ ++I G N L ++ L F+ M++ P+ V+Y AL
Sbjct: 205 CSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNE 397
ACS + I EG +I + + I + L+D+YS+ G +E+A + ++ + +E
Sbjct: 265 ACSGSQRIVEGQQIHALLWKY-GIESELCIESALMDMYSKCGSIEDAWTIFES-TTEVDE 322
Query: 398 VVLGSLLAACRTKGEIGLAEKVMKYLVELDPGG---DSNYV 435
V + +L G E+ +++ + + G D+N V
Sbjct: 323 VSMTVILVGLAQNGS---EEEAIQFFIRMLQAGVEIDANVV 360
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 184/458 (40%), Gaps = 76/458 (16%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNI------------------- 92
H + V W S ++ + + G+LV+A F M +V NI
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145
Query: 93 -----------TLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYA 141
TL +LS C +P +HA A G D ++ VG LI Y
Sbjct: 146 RMLGSGGFDHATLTIVLSVC---DTPEFCLVTKMIHALAILSGYD-KEISVGNKLITSYF 201
Query: 142 KSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGG 201
K G S R VFD M RN+++ ++ SG IE+ L
Sbjct: 202 KCGCSVSGRGVFDGMSHRNVITLTAVI-----SGLIENEL-------------------- 236
Query: 202 FVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKD 261
H+ L F M+ V P+ VT +H L + + ++
Sbjct: 237 ------HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHAL-LWKYGIES 289
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
+ + ++L+DMY++CG IE A +F+ VS I+VG A NG +EA+ FF M
Sbjct: 290 ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRV---RRIAPRIEHYGCLVDLYSRA 378
+ G E D ++A ID L + ++ + R+ + L+++YS+
Sbjct: 350 QAGVEIDA----NVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 379 GRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELD-PGGDSNYVLL 437
G L ++ V + MP K N V S++AA G A K+ + + L+ D ++ L
Sbjct: 406 GDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSL 464
Query: 438 SNIYAAVGKWDGANKVRRAMKD-RGIRKKPGFSSIEID 474
+ + VG D ++ MK+ GI + + ID
Sbjct: 465 LHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIID 502
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 215/426 (50%), Gaps = 42/426 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAE-VEPNNITLITLLSGCAHYPSPSSVSFGA 114
+ WT I + G VE A R+ + E V PN +T+ +L+S C V+ G
Sbjct: 284 VITWTCMINGYTEDGD-VENALELCRLMQFEGVRPNAVTIASLVSVCG---DALKVNDGK 339
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+H +A + + +D+ + T+LI MYAK VD VF S
Sbjct: 340 CLHGWAVRQQV-YSDIIIETSLISMYAKCKRVDLCFRVF--------------------S 378
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G + + P W+A+I G V+ + AL F+ M+ V P+ T+
Sbjct: 379 GASK-----YHTGP------WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR-- 292
+H +T+ ++ + L+ +Y++CG +E A ++F+G+ +
Sbjct: 428 PAYAALADLRQAMNIH-CYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 293 --TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+V W ++I G+ +G AL F M + G P+ +++T AL ACSH+GL++EGL
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
+F M + R HY C+VDL RAGRL+EA ++I +P +P V G+LLAAC T
Sbjct: 547 LFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
Query: 411 GEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
+ L E L EL+P NYVLL+NIYAA+G+W KVR M++ G+RKKPG S+
Sbjct: 607 ENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHST 666
Query: 471 IEIDSS 476
IEI S+
Sbjct: 667 IEIRSN 672
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 182/437 (41%), Gaps = 81/437 (18%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
++W + I+ + R+G + +A F M V+ ++ T++++L C H + G
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK---DLEMGRN 239
Query: 116 VHAYA--RKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
VH ++LG + ++V AL++MY K G +D AR VFD+M R++++W M++GY
Sbjct: 240 VHKLVEEKRLG---DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
G++E+AL+L C R MQ GV P+ VT+
Sbjct: 297 DGDVENALEL------------------------------C-RLMQFEGVRPNAVTIASL 325
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+H + Q D + + SLI MYA+C +++ +VF G
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSD-IIIETSLISMYAKCKRVDLCFRVFSGASKYH 384
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSY--------------------- 332
W++II G N L +AL F M++E EP+ +
Sbjct: 385 TGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHC 444
Query: 333 --------------TGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
TG + S G ++ +IFN ++ + + + +G L+ Y
Sbjct: 445 YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK-SKDVVLWGALISGYGMH 503
Query: 379 GRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE--LDPGGDSN 433
G AL V M + PNE+ S L AC G + + ++++E ++
Sbjct: 504 GDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNH 563
Query: 434 YVLLSNIYAAVGKWDGA 450
Y + ++ G+ D A
Sbjct: 564 YTCIVDLLGRAGRLDEA 580
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 173/418 (41%), Gaps = 71/418 (16%)
Query: 105 PSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAK--------------SGNVDSAR 150
P S +S+ + Y R+ GL + + V ++ K +G + S +
Sbjct: 76 PQSSLLSYNIVIRMYVRE-GLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 151 LVFDQMGLRNLVSW--------NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGF 202
L G R L SW N +L YM G++E A +FD R+ ISW +I G+
Sbjct: 135 LGLVVHG-RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY 193
Query: 203 VKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDN 262
+ + AL F M V D+ T+ VH+LV + L D
Sbjct: 194 YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV-EEKRLGDK 252
Query: 263 VRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK 322
+ V N+L++MY +CG ++ AR VFD M R +++W +I G+ +G + AL MQ
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLE 382
EG P+ V+ ++ C A +++G + R +++ I L+ +Y++ R++
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR-QQVYSDIIIETSLISMYAKCKRVD 371
Query: 383 -------------------------------EALDVIKNM---PMKPNEVVLGSLLAACR 408
+AL + K M ++PN L SLL A
Sbjct: 372 LCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYA 431
Query: 409 TKGEIGLAEKVMKYLVE------LDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDR 460
++ A + YL + LD L ++Y+ G + A+K+ ++++
Sbjct: 432 ALADLRQAMNIHCYLTKTGFMSSLDAATG-----LVHVYSKCGTLESAHKIFNGIQEK 484
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV--APDYV 228
Y G I A +LF+E P + +S+ +I +V++ + A+ F M GV PD
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T VH ++ +D V N+L+ MY G +E+AR VFD
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKY-VQNALLAMYMNFGKVEMARDVFDV 177
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
M +R ++SWN++I G+ NG ++AL F+ M E + D + L C H ++ G
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
R +K+ +R+ +IE LV++Y + GR++EA V M +
Sbjct: 238 -RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR 282
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 19/177 (10%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLV-EAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSV 110
HT P W++ IA C +LV +A F RMR +VEPN TL +LL Y + + +
Sbjct: 384 HTGP---WSAIIAG-CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA---YAALADL 436
Query: 111 SFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVF----DQMGLRNLVSWNT 166
+H Y K G M+ + T L+ +Y+K G ++SA +F ++ +++V W
Sbjct: 437 RQAMNIHCYLTKTGF-MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 167 MLDGYMRSGEIEDALQLFDEFPVR-----NAISWTALIGGFVKKDHHKQALECFREM 218
++ GY G+ +ALQ+F E VR N I++T+ + ++ L FR M
Sbjct: 496 LISGYGMHGDGHNALQVFMEM-VRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFM 551
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 273 YARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFE--PDGV 330
YA CG I AR++F+ M +++S+N +I + GL +A+S F M EG + PDG
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 331 SYTGALTACSHAGLIDEGLRI-------------------------FNKMKRVRRIAPRI 365
+Y A + GL + F K++ R + +
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 366 EH-----YGCLVDLYSRAGRLEEAL---DVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
++ + ++ Y R G + +AL D + N + + + S+L C ++ +
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 418 KVMKYLVELDPGGDSNYV--LLSNIYAAVGKWDGANKVRRAMKDRGI 462
V K LVE GD V L N+Y G+ D A V M+ R +
Sbjct: 239 NVHK-LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDV 284
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 222/443 (50%), Gaps = 37/443 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
VA T + + ++G+ +A FV + VE ++ +L CA S ++ G +
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA---SLEELNLGKQI 307
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA KLGL+ ++V VGT L+D Y ++
Sbjct: 308 HACVAKLGLE-SEVSVGTPLVDFY-------------------------------IKCSS 335
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP-DYVTVXXXXX 235
E A + F E N +SW+A+I G+ + ++A++ F+ ++ + + T
Sbjct: 336 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQ 395
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH + + SL + ++LI MY++CGC++ A +VF+ M + +V
Sbjct: 396 ACSVLADCNIGGQVHADAIKR-SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIV 454
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+W + I G A G A EAL F M G +P+ V++ LTACSHAGL+++G + M
Sbjct: 455 AWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM 514
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
R +AP I+HY C++D+Y+R+G L+EAL +KNMP +P+ + L+ C T + L
Sbjct: 515 LRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLEL 574
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
E + L +LDP + YVL N+Y GKW+ A ++ + M +R ++K+ S I+
Sbjct: 575 GEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKG 634
Query: 476 SIYKFVAGDKSHEENGSIYASLE 498
I++F+ GDK H + IY L+
Sbjct: 635 KIHRFIVGDKHHPQTQEIYEKLK 657
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 178/443 (40%), Gaps = 84/443 (18%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+ T+ I+ + G L +A F M + +P + TLL +P ++ FG +
Sbjct: 150 VSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLV---NPRALDFGRQI 206
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA+ + GL N + T +++MY K G + A+ VFDQM ++ V+ ++ GY ++G
Sbjct: 207 HAHVIRAGLCSN-TSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGR 265
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
DAL+LF + V + W + + V K A E+ L
Sbjct: 266 ARDALKLFVDL-VTEGVEWDSFVFSVVLK-----ACASLEELNLG--------------- 304
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H V + L+ V V L+D Y +C E A + F + VS
Sbjct: 305 ----------KQIHACV-AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVS 353
Query: 297 WNSIIVGFAANGLADEALSFFNSMQ-KEGFEPDGVSYTGALTACS-----------HA-- 342
W++II G+ +EA+ F S++ K + +YT ACS HA
Sbjct: 354 WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADA 413
Query: 343 ----------------------GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
G +D+ +F M P I + + ++ G
Sbjct: 414 IKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDN-----PDIVAWTAFISGHAYYGN 468
Query: 381 LEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE---LDPGGDSNY 434
EAL + + M MKPN V ++L AC G + + + ++ + P D +Y
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTID-HY 527
Query: 435 VLLSNIYAAVGKWDGANKVRRAM 457
+ +IYA G D A K + M
Sbjct: 528 DCMIDIYARSGLLDEALKFMKNM 550
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 152/376 (40%), Gaps = 62/376 (16%)
Query: 145 NVDSARLVFDQM--GLRN--LVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIG 200
++ RL+ D+M G+ N ++ N +L Y +EDA +LFDE NA+S T +I
Sbjct: 98 SLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMIS 157
Query: 201 GFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLK 260
+ ++ +A+ F M SG P +H V+ + L
Sbjct: 158 AYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVI-RAGLC 216
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM 320
N + +++MY +CG + A++VFD M + V+ ++VG+ G A +AL F +
Sbjct: 217 SNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDL 276
Query: 321 QKEGFEPDGVSYTGALTACS-----------HAGLIDEGL-------------------- 349
EG E D ++ L AC+ HA + GL
Sbjct: 277 VTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSF 336
Query: 350 ----RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLG---- 401
R F +++ P + ++ Y + + EEA+ K++ K N +L
Sbjct: 337 ESACRAFQEIRE-----PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK-NASILNSFTY 390
Query: 402 -------SLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVR 454
S+LA C G++ A+ + + L+ G L +Y+ G D AN+V
Sbjct: 391 TSIFQACSVLADCNIGGQVH-ADAIKRSLI----GSQYGESALITMYSKCGCLDDANEVF 445
Query: 455 RAMKDRGIRKKPGFSS 470
+M + I F S
Sbjct: 446 ESMDNPDIVAWTAFIS 461
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 200/376 (53%), Gaps = 41/376 (10%)
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
FG +H K + +D + ++LIDMY+K G V +AR VF +G ++LV +N M+ GY
Sbjct: 135 FGKMIHCLVLKFSYE-SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGY 193
Query: 172 MRSGEIEDALQLFDEFPV--------------------RN-------------------A 192
+ + ++AL L + + RN
Sbjct: 194 ANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV 253
Query: 193 ISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRL 252
+SWT++I G V +++A + F++M G+ P+ T+ +H
Sbjct: 254 VSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGY 313
Query: 253 VMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADE 312
+ L+D+ V ++L+DMY +CG I A +F +T V++NS+I +A +GLAD+
Sbjct: 314 SVVT-GLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADK 372
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
A+ F+ M+ G + D +++T LTACSHAGL D G +F M+ RI PR+EHY C+V
Sbjct: 373 AVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMV 432
Query: 373 DLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS 432
DL RAG+L EA ++IK M M+P+ V G+LLAACR G + LA K+L EL+P
Sbjct: 433 DLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSG 492
Query: 433 NYVLLSNIYAAVGKWD 448
N +LL+++YA G W+
Sbjct: 493 NGLLLTSLYANAGSWE 508
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 147/315 (46%), Gaps = 16/315 (5%)
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
Y+ G++ DA ++FDE P R+ +IG + +++++L+ FREM G+ D V
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H LV+ + S + + + +SLIDMY++ G + AR+VF +
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVL-KFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ +V +N++I G+A N ADEAL+ M+ G +PD +++ ++ SH ++
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAAC 407
I M + P + + ++ + E+A D K M + PN + +LL AC
Sbjct: 240 ILELMC-LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Query: 408 RTKGEIGLAEKVMKYLV--ELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKK 465
T + +++ Y V L+ G LL ++Y G A + RK
Sbjct: 299 TTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL-DMYGKCGFISEAMIL--------FRKT 349
Query: 466 PGFSSIEIDSSIYKF 480
P +++ +S I+ +
Sbjct: 350 PKKTTVTFNSMIFCY 364
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WTS I+ + Q +A F +M + PN+ T+ITLL C + + + G
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT---TLAYMKHGKE 309
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H Y+ GL+ + V +AL+DMY K G + A ++F + + V++N+M+ Y G
Sbjct: 310 IHGYSVVTGLEDHGF-VRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHG 368
Query: 176 EIEDALQLFDE 186
+ A++LFD+
Sbjct: 369 LADKAVELFDQ 379
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 264 RVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKE 323
R++ L+ Y CG + AR+VFD M R + +I A NG E+L FF M K+
Sbjct: 52 RIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKD 111
Query: 324 GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEH----YGCLVDLYSRAG 379
G + D L A + L+D R F KM + E L+D+YS+ G
Sbjct: 112 GLKLDAFIVPSLLKASRN--LLD---REFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG 166
Query: 380 RLEEALDVIKNM 391
+ A V ++
Sbjct: 167 EVGNARKVFSDL 178
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 224/459 (48%), Gaps = 35/459 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
VAW + I + +A + F MR V N IT++++LS C P + G
Sbjct: 428 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL-LPG-DLLERGKP 485
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HAY G + +D V +LI MYAK G++ S++
Sbjct: 486 LHAYIVSAGFE-SDEHVKNSLITMYAKCGDLSSSQ------------------------- 519
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
LF+ RN I+W A++ H ++ L+ +M+ GV+ D +
Sbjct: 520 ------DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H L + D+ + N+ DMY++CG I ++ ++R++
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSF-IFNAAADMYSKCGEIGEVVKMLPPSVNRSLP 632
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN +I +G +E + F+ M + G +P V++ LTACSH GL+D+GL ++ +
Sbjct: 633 SWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 692
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
R + P IEH C++DL R+GRL EA I MPMKPN++V SLLA+C+ G +
Sbjct: 693 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR 752
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
K + L +L+P DS YVL SN++A G+W+ VR+ M + I+KK S +++
Sbjct: 753 GRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 812
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
+ F GD++H + IYA LE + ++ GYV D S
Sbjct: 813 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTS 851
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 164/403 (40%), Gaps = 71/403 (17%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
T ++W S +A G+ ++A M + N +T + L+ C +P
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF---TPDFFEK 380
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G +H GL N + +G AL+ MY K G
Sbjct: 381 GRILHGLVVVSGLFYNQI-IGNALVSMYGKIG---------------------------- 411
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
E+ ++ ++ + P R+ ++W ALIGG+ + + +AL F+ M++ GV+ +Y+TV
Sbjct: 412 ---EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 468
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+ + + V NSLI MYA+CG + ++ +F+G+ +R
Sbjct: 469 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 528
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR-- 350
+++WN+++ A +G +E L + M+ G D S++ L+A + +++EG +
Sbjct: 529 NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 588
Query: 351 -------------IFNKM-----------KRVRRIAPRIEH----YGCLVDLYSRAGRLE 382
IFN + V+ + P + + L+ R G E
Sbjct: 589 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 648
Query: 383 EALDVIK---NMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKY 422
E M +KP V SLL AC GL +K + Y
Sbjct: 649 EVCATFHEMLEMGIKPGHVTFVSLLTACSHG---GLVDKGLAY 688
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 169/388 (43%), Gaps = 41/388 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + ++ R G +E F +M + ++P++ + +L++ C S S G V
Sbjct: 24 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR--SGSMFREGVQV 81
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + K GL ++DV V TA++ +Y G V +R VF++M
Sbjct: 82 HGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEEM-------------------- 120
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
P RN +SWT+L+ G+ K ++ ++ ++ M+ GV + ++
Sbjct: 121 -----------PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 169
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+ V+ + L+ + V NSLI M G ++ A +FD M R +S
Sbjct: 170 CGLLKDESLGRQIIGQVV-KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 228
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WNSI +A NG +E+ F+ M++ E + + + L+ H G I +
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
++ + L+ +Y+ AGR EA V K MP K + + SL+A+ G +
Sbjct: 289 KM-GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDGR---S 343
Query: 417 EKVMKYLVELDPGGDS-NYVLLSNIYAA 443
+ L + G S NYV ++ AA
Sbjct: 344 LDALGLLCSMISSGKSVNYVTFTSALAA 371
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 158/350 (45%), Gaps = 19/350 (5%)
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP-DYVT 229
Y + G ++ A LFD PVRN +SW ++ G V+ + + +E FR+M G+ P +V
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 230 VXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM 289
VH V L D V VS +++ +Y G + +R+VF+ M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 290 LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE-- 347
R +VSW S++VG++ G +E + + M+ EG + S + +++C GL+ +
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 348 -GLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
G +I ++ + + ++ L+ + G ++ A + M + + + S+ AA
Sbjct: 178 LGRQIIGQVVK-SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAA 235
Query: 407 CRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKP 466
G I + ++ + + N +S + + +G D K R + G+ K
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHD--EVNSTTVSTLLSVLGHVD-HQKWGRGI--HGLVVKM 290
Query: 467 GFSSIE-IDSSIYKFVAGDKSHEENGSIYASL---ELLSFELQLCGYVPD 512
GF S+ + +++ + AG E ++ + +L+S+ + +V D
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 340
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 136/341 (39%), Gaps = 41/341 (12%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WTS + + G+ E + MR V N ++ ++S C S G
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES---LGRQ 181
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+ K GL+ + + V +LI M GNVD A +FD
Sbjct: 182 IIGQVVKSGLE-SKLAVENSLISMLGSMGNVDYANYIFD--------------------- 219
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ R+ ISW ++ + + H +++ F M+ + TV
Sbjct: 220 ----------QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Query: 236 XXXXXXXXXXXXWVHRLV--MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+H LV M DS+ V V N+L+ MYA G A VF M +
Sbjct: 270 VLGHVDHQKWGRGIHGLVVKMGFDSV---VCVCNTLLRMYAGAGRSVEANLVFKQMPTKD 326
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
++SWNS++ F +G + +AL SM G + V++T AL AC ++G RI +
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILH 385
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
+ V + LV +Y + G + E+ V+ MP +
Sbjct: 386 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 426
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 272 MYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVS 331
MY + G ++ AR +FD M R VSWN+++ G GL E + FF M G +P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 332 YTGALTACSHAG-LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKN 390
+TAC +G + EG+++ + + ++ + ++ LY G + + V +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 391 MPMKPNEVVLGSLLAACRTKGE 412
MP + N V SL+ KGE
Sbjct: 120 MPDR-NVVSWTSLMVGYSDKGE 140
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 218/414 (52%), Gaps = 38/414 (9%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
AW + + + + V+ F +++ +E ++ + +++S C+H +V G ++H
Sbjct: 400 AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHI---GAVLLGKSLH 456
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
Y K LD+ + V +LID+Y K G++ V+W
Sbjct: 457 CYVVKTSLDLT-ISVVNSLIDLYGKMGDLT--------------VAW------------- 488
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
++F E N I+W A+I +V + ++A+ F M P +T+
Sbjct: 489 ----RMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+HR + T+ + N+ +S +LIDMYA+CG +E +R++FD + V W
Sbjct: 544 VNTGSLERGQMIHRYI-TETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCW 602
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N +I G+ +G + A++ F+ M++ +P G ++ L+AC+HAGL+++G ++F KM +
Sbjct: 603 NVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ 662
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
+ P ++HY CLVDL SR+G LEEA + +MP P+ V+ G+LL++C T GE +
Sbjct: 663 YD-VKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGI 721
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
++ + V DP D Y++L+N+Y+A GKW+ A + R M++ G+ K+ G S +
Sbjct: 722 RMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 137/330 (41%), Gaps = 74/330 (22%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+ W + IA + Q +A + F RM +P++ITL+TLL C + S+ G
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVN---TGSLERGQM 554
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H Y + +MN + + ALIDMYAK G+++ +R +FD ++ V WN M+ GY G
Sbjct: 555 IHRYITETEHEMN-LSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHG 613
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++E A+ LFD+ E + P ++ +
Sbjct: 614 DVESAIALFDQ----------------------------MEESDVKPTGPTFLALLSACT 645
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
L M Q +K N++ + L+D+ +R G +E
Sbjct: 646 HAGLVEQGKKLF----LKMHQYDVKPNLKHYSCLVDLLSRSGNLE--------------- 686
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
EA S SM F PDGV + L++C G + G+R+
Sbjct: 687 ----------------EAESTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMGIRM---A 724
Query: 356 KRVRRIAPRIE-HYGCLVDLYSRAGRLEEA 384
+R P+ + +Y L ++YS AG+ EEA
Sbjct: 725 ERAVASDPQNDGYYIMLANMYSAAGKWEEA 754
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 55/416 (13%)
Query: 33 FSPYNPNTNQSFS-LRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNN 91
FS Y+ + N S + L + +WTS IA RSG + E+ F M+ + P+
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 92 ITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARL 151
+ + L++ V G H + + + D V +L+ MY K + A
Sbjct: 332 VVISCLIN---ELGKMMLVPQGKAFHGFVIRHCFSL-DSTVCNSLLSMYCKFELLSVAEK 387
Query: 152 VFDQMGLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQ 210
+F ++ N +WNTML G + K H +
Sbjct: 388 LFCRISEEGNKEAWNTMLKG-------------------------------YGKMKCHVK 416
Query: 211 ALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLI 270
+E FR++Q G+ D + +H V+ + SL + V NSLI
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV-KTSLDLTISVVNSLI 475
Query: 271 DMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGV 330
D+Y + G + +A ++F +++WN++I + +++A++ F+ M E F+P +
Sbjct: 476 DLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSI 534
Query: 331 SYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEH------YGCLVDLYSRAGRLEEA 384
+ L AC + G ++ G + + R EH L+D+Y++ G LE++
Sbjct: 535 TLVTLLMACVNTGSLERG-------QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS 587
Query: 385 LDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELD--PGGDSNYVLLS 438
++ K + V +++ G++ A + + E D P G + LLS
Sbjct: 588 RELFDAGNQK-DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 174/447 (38%), Gaps = 79/447 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVE---PNNITLITLLSGCAHYPSPSSVSF 112
VAWT+ I+ H ++G+ +M A + PN TL C++ ++
Sbjct: 192 VVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNL---GALKE 248
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G +H +A K GL + V +++ Y+KSGN A L F +
Sbjct: 249 GRCLHGFAVKNGLASSKF-VQSSMFSFYSKSGNPSEAYLSFRE----------------- 290
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
L DE + SWT++I + +++ + F EMQ G+ PD V +
Sbjct: 291 ----------LGDE----DMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISC 336
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
H V+ D+ V NSL+ MY + + +A ++F +
Sbjct: 337 LINELGKMMLVPQGKAFHGFVIRHCFSLDST-VCNSLLSMYCKFELLSVAEKLFCRISEE 395
Query: 293 -TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
+WN+++ G+ + + F +Q G E D S T +++CSH G + G +
Sbjct: 396 GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL 455
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRL------------------------------ 381
+ + + I L+DLY + G L
Sbjct: 456 HCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQS 514
Query: 382 EEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGD-SNYVLL 437
E+A+ + M KP+ + L +LL AC G + + + +Y+ E + + S L
Sbjct: 515 EKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAAL 574
Query: 438 SNIYAAVGKWDGANKVRRAMKDRGIRK 464
++YA G + + R + D G +K
Sbjct: 575 IDMYAKCGHLEKS----RELFDAGNQK 597
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 4/229 (1%)
Query: 159 RNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM 218
N+ + ++ Y G+ + ++F R+ W ++I + ++L F M
Sbjct: 57 ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM 116
Query: 219 QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGC 278
LSG +PD+ T +VH LV+ N V S + Y++CG
Sbjct: 117 LLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF 176
Query: 279 IEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFE---PDGVSYTGA 335
++ A VFD M R +V+W +II G NG ++ L + M G + P+ +
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 336 LTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
ACS+ G + EG R + +A + YS++G EA
Sbjct: 237 FQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEA 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 112/293 (38%), Gaps = 38/293 (12%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W S I H +G + F M + P++ T ++S CA
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACA---------------- 136
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
++ VGT + + K G D RN + + Y + G ++
Sbjct: 137 -------ELLWFHVGTFVHGLVLKHGGFD-----------RNTAVGASFVYFYSKCGFLQ 178
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV---APDYVTVXXXXX 235
DA +FDE P R+ ++WTA+I G V+ + L +M +G P+ T+
Sbjct: 179 DACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQ 238
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H + ++ L + V +S+ Y++ G A F + M
Sbjct: 239 ACSNLGALKEGRCLHGFAV-KNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMF 297
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
SW SII A +G +E+ F MQ +G PDGV + + L+ +G
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 250 HRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGL 309
H ++ L +N+ V++ LI YA G ++ +VF + R + WNSII +NG
Sbjct: 46 HNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGD 105
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACS-----HAGLIDEGLRI----FNKMKRVRR 360
+L FF SM G PD + ++AC+ H G GL + F++ V
Sbjct: 106 YARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVG- 164
Query: 361 IAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVM 420
V YS+ G L++A V MP + + V ++++ GE +E +
Sbjct: 165 --------ASFVYFYSKCGFLQDACLVFDEMPDR-DVVAWTAIISGHVQNGE---SEGGL 212
Query: 421 KYLVELDPGG 430
YL ++ G
Sbjct: 213 GYLCKMHSAG 222
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 224/459 (48%), Gaps = 35/459 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
VAW + I + +A + F MR V N IT++++LS C P + G
Sbjct: 411 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL-LPG-DLLERGKP 468
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HAY G + +D V +LI MYAK G++ S++
Sbjct: 469 LHAYIVSAGFE-SDEHVKNSLITMYAKCGDLSSSQ------------------------- 502
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
LF+ RN I+W A++ H ++ L+ +M+ GV+ D +
Sbjct: 503 ------DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H L + D+ + N+ DMY++CG I ++ ++R++
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLGFEHDSF-IFNAAADMYSKCGEIGEVVKMLPPSVNRSLP 615
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN +I +G +E + F+ M + G +P V++ LTACSH GL+D+GL ++ +
Sbjct: 616 SWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 675
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
R + P IEH C++DL R+GRL EA I MPMKPN++V SLLA+C+ G +
Sbjct: 676 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR 735
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
K + L +L+P DS YVL SN++A G+W+ VR+ M + I+KK S +++
Sbjct: 736 GRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 795
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS 514
+ F GD++H + IYA LE + ++ GYV D S
Sbjct: 796 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTS 834
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 164/403 (40%), Gaps = 71/403 (17%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
T ++W S +A G+ ++A M + N +T + L+ C +P
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF---TPDFFEK 363
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G +H GL N + +G AL+ MY K G
Sbjct: 364 GRILHGLVVVSGLFYNQI-IGNALVSMYGKIG---------------------------- 394
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
E+ ++ ++ + P R+ ++W ALIGG+ + + +AL F+ M++ GV+ +Y+TV
Sbjct: 395 ---EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 451
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+ + + V NSLI MYA+CG + ++ +F+G+ +R
Sbjct: 452 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 511
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR-- 350
+++WN+++ A +G +E L + M+ G D S++ L+A + +++EG +
Sbjct: 512 NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 571
Query: 351 -------------IFNKM-----------KRVRRIAPRIEH----YGCLVDLYSRAGRLE 382
IFN + V+ + P + + L+ R G E
Sbjct: 572 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 631
Query: 383 EALDVIK---NMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKY 422
E M +KP V SLL AC GL +K + Y
Sbjct: 632 EVCATFHEMLEMGIKPGHVTFVSLLTACSHG---GLVDKGLAY 671
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 169/388 (43%), Gaps = 41/388 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + ++ R G +E F +M + ++P++ + +L++ C S S G V
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR--SGSMFREGVQV 64
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + K GL ++DV V TA++ +Y G V +R VF++M
Sbjct: 65 HGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEEM-------------------- 103
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
P RN +SWT+L+ G+ K ++ ++ ++ M+ GV + ++
Sbjct: 104 -----------PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 152
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+ V+ + L+ + V NSLI M G ++ A +FD M R +S
Sbjct: 153 CGLLKDESLGRQIIGQVV-KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 211
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WNSI +A NG +E+ F+ M++ E + + + L+ H G I +
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
++ + L+ +Y+ AGR EA V K MP K + + SL+A+ G +
Sbjct: 272 KM-GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDGR---S 326
Query: 417 EKVMKYLVELDPGGDS-NYVLLSNIYAA 443
+ L + G S NYV ++ AA
Sbjct: 327 LDALGLLCSMISSGKSVNYVTFTSALAA 354
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 136/341 (39%), Gaps = 41/341 (12%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WTS + + G+ E + MR V N ++ ++S C S G
Sbjct: 108 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES---LGRQ 164
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+ K GL+ + + V +LI M GNVD A +FD
Sbjct: 165 IIGQVVKSGLE-SKLAVENSLISMLGSMGNVDYANYIFD--------------------- 202
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ R+ ISW ++ + + H +++ F M+ + TV
Sbjct: 203 ----------QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 252
Query: 236 XXXXXXXXXXXXWVHRLV--MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+H LV M DS+ V V N+L+ MYA G A VF M +
Sbjct: 253 VLGHVDHQKWGRGIHGLVVKMGFDSV---VCVCNTLLRMYAGAGRSVEANLVFKQMPTKD 309
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
++SWNS++ F +G + +AL SM G + V++T AL AC ++G RI +
Sbjct: 310 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILH 368
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
+ V + LV +Y + G + E+ V+ MP +
Sbjct: 369 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 409
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 149/333 (44%), Gaps = 19/333 (5%)
Query: 188 PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP-DYVTVXXXXXXXXXXXXXXXX 246
PVRN +SW ++ G V+ + + +E FR+M G+ P +V
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAA 306
VH V L D V VS +++ +Y G + +R+VF+ M R +VSW S++VG++
Sbjct: 62 VQVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 307 NGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE---GLRIFNKMKRVRRIAP 363
G +E + + M+ EG + S + +++C GL+ + G +I ++ + +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVK-SGLES 176
Query: 364 RIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
++ L+ + G ++ A + M + + + S+ AA G I + ++ +
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 424 VELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE-IDSSIYKFVA 482
+ N +S + + +G D K R + G+ K GF S+ + +++ + A
Sbjct: 236 RRFHD--EVNSTTVSTLLSVLGHVD-HQKWGRGI--HGLVVKMGFDSVVCVCNTLLRMYA 290
Query: 483 GDKSHEENGSIYASL---ELLSFELQLCGYVPD 512
G E ++ + +L+S+ + +V D
Sbjct: 291 GAGRSVEANLVFKQMPTKDLISWNSLMASFVND 323
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 235/462 (50%), Gaps = 52/462 (11%)
Query: 39 NTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFV-RMREAEVEPNNITLITL 97
N SF L +TK ++ ++ + SG+ ++A F R R++ P+ + ++
Sbjct: 15 NKFDSFLLHFHTK----SLKSNHTLKQYLESGEPIKALLDFRHRFRQS---PSFVDSFSV 67
Query: 98 LSGCAHYPSPSSVSF-GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM 156
L + + S G +HA RKLG + +++ T+L+ Y+ G+VD AR
Sbjct: 68 LFAIKVSSAQKASSLDGRQIHALVRKLGFNAV-IQIQTSLVGFYSSVGDVDYAR------ 120
Query: 157 GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR-NAISWTALIGGFVKKDHHKQALECF 215
Q+FDE P + N + WTA+I + + ++ +A+E F
Sbjct: 121 -------------------------QVFDETPEKQNIVLWTAMISAYTENENSVEAIELF 155
Query: 216 REMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVH-RLVMTQDSLKDNVRVSNSLIDMYA 274
+ M+ + D V V ++ R + + L ++ + NSL++MY
Sbjct: 156 KRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYV 215
Query: 275 RCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM------QKEGFEPD 328
+ G E AR++FD + + + ++ S+I G+A NG A E+L F M Q P+
Sbjct: 216 KSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPN 275
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
V++ G L ACSH+GL++EG R F M + PR H+GC+VDL+ R+G L++A + I
Sbjct: 276 DVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFI 335
Query: 389 KNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWD 448
MP+KPN V+ +LL AC G + L E+V + + ELD +YV LSNIYA+ G WD
Sbjct: 336 NQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWD 395
Query: 449 GANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEEN 490
+K+R ++ R+ PG S IE+ S I +FV+G +++E
Sbjct: 396 EKSKMRDRVRK---RRMPGKSWIELGSIINEFVSGPDNNDEQ 434
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 227/459 (49%), Gaps = 28/459 (6%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGC---AHYPSPSSV--- 110
V+W + I + G EA F +M + VE + IT + GC +Y +
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISR 270
Query: 111 --SFGATVHAYARKLGLD----MNDVKVGTAL--IDMYAKSGNVDSARLVFDQMGLRNLV 162
+F ++ A +GL + +++G + + +++ +D+ R
Sbjct: 271 MRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR------------ 318
Query: 163 SWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG 222
NT++ Y + ++ AL +F + + +W ++I G+ + + ++A REM ++G
Sbjct: 319 --NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 223 VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIA 282
P+ +T+ H ++ + KD + NSL+D+YA+ G I A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
+QV D M R V++ S+I G+ G AL+ F M + G +PD V+ L+ACSH+
Sbjct: 437 KQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHS 496
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGS 402
L+ EG R+F KM+ I P ++H+ C+VDLY RAG L +A D+I NMP KP+ +
Sbjct: 497 KLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWAT 556
Query: 403 LLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
LL AC G + + + L+E+ P YVL++N+YAA G W +VR M+D G+
Sbjct: 557 LLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGV 616
Query: 463 RKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLS 501
+K PG + I+ DS F GD S E + Y L+ L+
Sbjct: 617 KKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLN 655
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 177/476 (37%), Gaps = 115/476 (24%)
Query: 62 SIAHHCRSGQLVEAASTF--VRMREAEVEPNNITL---ITLLSGCAHYPSPSSVSFGATV 116
S+ H G L +A TF +R++ + +++ L +LLS C + G V
Sbjct: 9 SLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACV---DVRAFLAGVQV 65
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA+ G++ + V V L+ Y+ L N
Sbjct: 66 HAHCISSGVEYHSVLV-PKLVTFYSA-------------FNLHN---------------- 95
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+A + + + + + W LI + K + ++ + ++ M G+ PD T
Sbjct: 96 --EAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKA 153
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
VH + S K ++ V N+LI MY R + IAR++FD M R VS
Sbjct: 154 CGETLDVAFGRVVHGSIEVS-SYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVS 212
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVS-------------YTGA-------- 335
WN++I +A+ G+ EA F+ M G E ++ Y GA
Sbjct: 213 WNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR 272
Query: 336 --------------LTACSHAGLIDEG----------------------LRIFNKMKRVR 359
L ACS G I G + +++K K +R
Sbjct: 273 NFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLR 332
Query: 360 R---IAPRIEH-----YGCLVDLYSRAGRLEEALDVIKNMPM---KPNEVVLGSLLAACR 408
+ + E + ++ Y++ + EEA +++ M + +PN + L S+L C
Sbjct: 333 HALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCA 392
Query: 409 TKGEIGLAEKVMKYLVELDPGGDSNYVLLSN----IYAAVGKWDGANKVRRAMKDR 460
+ ++ Y++ D Y +L N +YA GK A +V M R
Sbjct: 393 RIANLQHGKEFHCYILRRKCFKD--YTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR 446
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 224/461 (48%), Gaps = 45/461 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT+ I S +A S F+ MR V PN +T + L++ + G
Sbjct: 342 VVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAV---KCNEQIKEGLK 393
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H K G +++ VG + I +YAK F+ +
Sbjct: 394 IHGLCIKTGF-VSEPSVGNSFITLYAK----------FEAL------------------- 423
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
EDA + F++ R ISW A+I GF + +AL+ F + +Y
Sbjct: 424 --EDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNA 481
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+ + L VS++L+DMYA+ G I+ + +VF+ M +
Sbjct: 482 IAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF 541
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
W SII ++++G + ++ F+ M KE PD V++ LTAC+ G++D+G IFN M
Sbjct: 542 VWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
V + P EHY C+VD+ RAGRL+EA +++ +P P E +L S+L +CR G + +
Sbjct: 602 IEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKM 661
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
KV + +E+ P +YV + NIYA +WD A ++R+AM+ + + K+ GFS I++
Sbjct: 662 GAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGD 721
Query: 476 -----SIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVP 511
++ F +GDKSH ++ IY +E++ E+ L G V
Sbjct: 722 TEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKVA 762
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 174/441 (39%), Gaps = 92/441 (20%)
Query: 57 VAWTSSIAHHCRSGQL-VEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
++W S ++ + G EA F M VE ++++ ++++ C H + +
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH---ETDLKLARQ 297
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H K G + + ++VG L+ Y+K G +++ + V
Sbjct: 298 IHGLCIKRGYE-SLLEVGNILMSRYSKCGVLEAVKSV----------------------- 333
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
F + RN +SWT +I KD A+ F M+ GV P+ VT
Sbjct: 334 --------FHQMSERNVVSWTTMISS--NKD---DAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H L + + V NS I +YA+ +E A++ F+ + R ++
Sbjct: 381 AVKCNEQIKEGLKIHGLCI-KTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 439
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA------------- 342
SWN++I GFA NG + EAL F S E P+ ++ L A + A
Sbjct: 440 SWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHA 498
Query: 343 ------------------------GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
G IDE ++FN+M + + + ++ YS
Sbjct: 499 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFV-----WTSIISAYSSH 553
Query: 379 GRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE---LDPGGDS 432
G E +++ M + P+ V S+L AC KG + ++ ++E L+P +
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE- 612
Query: 433 NYVLLSNIYAAVGKWDGANKV 453
+Y + ++ G+ A ++
Sbjct: 613 HYSCMVDMLGRAGRLKEAEEL 633
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 150/358 (41%), Gaps = 50/358 (13%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N ++ Y ++G ++AL +F+ + +SW ++ GF D ++ AL M+ +GV
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVV 171
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
D T + V+ + L+ ++ V NS I MY+R G AR+
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVV-KTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 285 VFDGMLHRTMVSWNSIIVGFAANG-LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
VFD M + M+SWNS++ G + G EA+ F M +EG E D VS+T +T C H
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLE--------------------- 382
+ +I + R +E L+ YS+ G LE
Sbjct: 291 DLKLARQIHGLCIK-RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI 349
Query: 383 -----EALDVIKNMPMK---PNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL----DPGG 430
+A+ + NM PNEV L+ A + +I K+ ++ +P
Sbjct: 350 SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 431 DSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHE 488
++++ L YA K++ ++A +D R+ I ++ I F SHE
Sbjct: 410 GNSFITL---YA---KFEALEDAKKAFEDITFRE-----IISWNAMISGFAQNGFSHE 456
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 180/446 (40%), Gaps = 83/446 (18%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
DP V ++I Q+ A + VRM+ A V + T T LS C
Sbjct: 138 VDPDVVSWNTILSGFDDNQI--ALNFVVRMKSAGVVFDAFTYSTALSFCV---GSEGFLL 192
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G + + K GL+ +D+ VG + I MY+
Sbjct: 193 GLQLQSTVVKTGLE-SDLVVGNSFITMYS------------------------------- 220
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHK-QALECFREMQLSGVAPDYVTVX 231
RSG A ++FDE ++ ISW +L+ G ++ +A+ FR+M GV D+V+
Sbjct: 221 RSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 280
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
+H L + + + + V N L+ Y++CG +E + VF M
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKR-GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSE 339
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
R +VSW ++I ++N D+A+S F +M+ +G P+ V++ G + A I EGL+I
Sbjct: 340 RNVVSWTTMI---SSN--KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Query: 352 FNKMKRVRRIA-PRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---------------- 394
+ ++ P + + + LY++ LE+A +++ +
Sbjct: 395 HGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNG 452
Query: 395 -----------------PNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL- 436
PNE GS+L A +I + + + L G +S V+
Sbjct: 453 FSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS 512
Query: 437 --LSNIYAAVGKWDGANKVRRAMKDR 460
L ++YA G D + KV M +
Sbjct: 513 SALLDMYAKRGNIDESEKVFNEMSQK 538
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 13/255 (5%)
Query: 180 ALQLFDEFPVRNAI-SWTALIGGFVKKDHHKQALECFRE-MQLSGVAPDYVTVXXXXXXX 237
A +LFD RNA S I ++++ +AL F+E +QL V
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H T V VSN+++ MY + G + A +F+ ++ +VSW
Sbjct: 87 ACRGDLKRGCQIHGFS-TTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSW 145
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N+I+ GF N + AL+F M+ G D +Y+ AL+ C + GL++ + + +
Sbjct: 146 NTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVK 202
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
+ + + +YSR+G A V M K + + SLL+ +G G
Sbjct: 203 T-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSGLSQEGTFGFEA 260
Query: 418 KV-----MKYLVELD 427
V M+ VELD
Sbjct: 261 VVIFRDMMREGVELD 275
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 217/450 (48%), Gaps = 38/450 (8%)
Query: 54 DPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
D +V W + + + + + +A F +MRE V + T+ ++LS + + G
Sbjct: 225 DDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSA---FTVSGDIDNG 281
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
++H A K G +D+ V ALIDMY KS W
Sbjct: 282 RSIHGLAVKTG-SGSDIVVSNALIDMYGKS-------------------KW--------- 312
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
+E+A +F+ R+ +W +++ H L F M SG+ PD VT+
Sbjct: 313 ---LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTV 369
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLK---DNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H ++ L N + NSL+DMY +CG + AR VFD M
Sbjct: 370 LPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR 429
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ SWN +I G+ + AL F+ M + G +PD +++ G L ACSH+G ++EG
Sbjct: 430 VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRN 489
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
+M+ V I P +HY C++D+ RA +LEEA ++ + P+ N VV S+L++CR
Sbjct: 490 FLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLH 549
Query: 411 GEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
G LA K L EL+P YVL+SN+Y GK++ VR AM+ + ++K PG S
Sbjct: 550 GNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSW 609
Query: 471 IEIDSSIYKFVAGDKSHEENGSIYASLELL 500
I + + ++ F G+++H E SI+ L L+
Sbjct: 610 IVLKNGVHTFFTGNQTHPEFKSIHDWLSLV 639
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 151/355 (42%), Gaps = 48/355 (13%)
Query: 69 SGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMN 128
+G ++A T+ MR + P+ T +LL G +S VH A KLG D +
Sbjct: 139 NGSPLDAMETYREMRANGILPDKYTFPSLLKG----SDAMELSDVKKVHGLAFKLGFD-S 193
Query: 129 DVKVGTALIDMYAKSGNVDSARLVFDQMGLR-NLVSWNTMLDGYMRSGEIEDALQLFDEF 187
D VG+ L+ Y+K +V+ A+ VFD++ R + V WN +++GY + EDAL +F
Sbjct: 194 DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS-- 251
Query: 188 PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXX 247
+M+ GV T+
Sbjct: 252 -----------------------------KMREEGVGVSRHTITSVLSAFTVSGDIDNGR 282
Query: 248 WVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAAN 307
+H L + S D V VSN+LIDMY + +E A +F+ M R + +WNS++
Sbjct: 283 SIHGLAVKTGSGSDIV-VSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYC 341
Query: 308 GLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM---KRVRRIAPR 364
G D L+ F M G PD V+ T L C + +G I M + R +
Sbjct: 342 GDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSN 401
Query: 365 IEHYGCLVDLYSRAGRLEEALDVIKNMPMKP----NEVVLGSLLAACRTKGEIGL 415
+ L+D+Y + G L +A V +M +K N ++ G + +C GE+ L
Sbjct: 402 EFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSC---GELAL 453
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 127/303 (41%), Gaps = 39/303 (12%)
Query: 90 NNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSA 149
N T I L CA S G +H + + G + + GT+L++MYAK G + A
Sbjct: 59 NVATCIATLQRCAQRKDYVS---GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRA 115
Query: 150 RLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHK 209
LVF G E R+ + ALI GFV
Sbjct: 116 VLVF---------------------GGSE-----------RDVFGYNALISGFVVNGSPL 143
Query: 210 QALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSL 269
A+E +REM+ +G+ PD T VH L + + V + L
Sbjct: 144 DAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKK-VHGLAF-KLGFDSDCYVGSGL 201
Query: 270 IDMYARCGCIEIARQVFDGMLHR-TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
+ Y++ +E A++VFD + R V WN+++ G++ ++AL F+ M++EG
Sbjct: 202 VTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVS 261
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
+ T L+A + +G ID G R + + I L+D+Y ++ LEEA +
Sbjct: 262 RHTITSVLSAFTVSGDIDNG-RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIF 320
Query: 389 KNM 391
+ M
Sbjct: 321 EAM 323
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 204 KKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNV 263
K+ H C +Q DYV+ +H ++ + L D+
Sbjct: 53 KRYEHHNVATCIATLQRCAQRKDYVS----------------GQQIHGFMVRKGFLDDSP 96
Query: 264 RVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKE 323
R SL++MYA+CG + A VF G R + +N++I GF NG +A+ + M+
Sbjct: 97 RAGTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRAN 155
Query: 324 GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIE-----HYGC-LVDLYSR 377
G PD ++ L L D +K+V +A ++ + G LV YS+
Sbjct: 156 GILPDKYTFPSLLKGSDAMELSD--------VKKVHGLAFKLGFDSDCYVGSGLVTSYSK 207
Query: 378 AGRLEEALDVIKNMPMKPNEVVLGSLL 404
+E+A V +P + + V+ +L+
Sbjct: 208 FMSVEDAQKVFDELPDRDDSVLWNALV 234
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 223/446 (50%), Gaps = 38/446 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAE--VEPNNITLITLLSGCAHYPSPSSVSFGA 114
VAW S I+ C++G+ EA F M++ + ++P++ + ++ + CA ++ FG
Sbjct: 440 VAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA---GLEALRFGL 496
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
VH K GL +N V VG++LID+Y+K G
Sbjct: 497 QVHGSMIKTGLVLN-VFVGSSLIDLYSKCG------------------------------ 525
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
E AL++F N ++W ++I + + + + +++ F M G+ PD V++
Sbjct: 526 -LPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H + + + + + N+LIDMY +CG + A +F M H+++
Sbjct: 585 VAISSTASLLKGKSLHGYTL-RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
++WN +I G+ ++G ALS F+ M+K G PD V++ ++AC+H+G ++EG IF
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
MK+ I P +EHY +VDL RAG LEEA IK MP++ + + LL+A RT +
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
L + L+ ++P S YV L N+Y G + A K+ MK++G+ K+PG S IE+
Sbjct: 764 LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823
Query: 475 SSIYKFVAGDKSHEENGSIYASLELL 500
F +G S I+ L L
Sbjct: 824 DRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 147/360 (40%), Gaps = 41/360 (11%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W I SG + ++ + V+ + + L C+ + FG
Sbjct: 237 VVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ---SENSGFGRQ 293
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H K+GL ND V T+L+ MY+K G V A VF S
Sbjct: 294 IHCDVVKMGLH-NDPYVCTSLLSMYSKCGMVGEAETVF--------------------SC 332
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++ L++ W A++ + + D+ AL+ F M+ V PD T+
Sbjct: 333 VVDKRLEI-----------WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH + + ++ + ++L+ +Y++CGC A VF M + MV
Sbjct: 382 CCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMV 440
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQ--KEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+W S+I G NG EAL F M+ + +PD T AC+ + GL++
Sbjct: 441 AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHG 500
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
M + + + L+DLYS+ G E AL V +M + N V S++ +C ++ +
Sbjct: 501 SMIKTGLVL-NVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNL 557
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 161/371 (43%), Gaps = 44/371 (11%)
Query: 54 DPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
D TV W S I + + + E F RM V P+ +L ++S + G
Sbjct: 132 DVTV-WNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE-G 189
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSG-NVDSARLVFDQMGLRNLVSWNTMLDGYM 172
+H + + LD D + TALIDMY K G ++D+ R+ + N+V WN M+ G+
Sbjct: 190 KQIHGFMLRNSLD-TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 173 RSGEIEDALQLFDEFPVRNAISW--TALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
SG E +L L+ N++ T+ G AL + + SG
Sbjct: 249 GSGICESSLDLY-MLAKNNSVKLVSTSFTG----------ALGACSQSENSGFGRQ---- 293
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H V+ L ++ V SL+ MY++CG + A VF ++
Sbjct: 294 ------------------IHCDVVKM-GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ + WN+++ +A N AL F M+++ PD + + ++ CS GL + G
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 351 IFNKM-KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRT 409
+ ++ KR + IE L+ LYS+ G +A V K+M K + V GSL++
Sbjct: 395 VHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLCK 451
Query: 410 KGEIGLAEKVM 420
G+ A KV
Sbjct: 452 NGKFKEALKVF 462
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 37/312 (11%)
Query: 92 ITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARL 151
T +LL C+ + +++S+G T+H LG D + T+L++MY K G +D A
Sbjct: 61 FTFPSLLKACS---ALTNLSYGKTIHGSVVVLGWRY-DPFIATSLVNMYVKCGFLDYAVQ 116
Query: 152 VFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQA 211
VFD W+ G R+ W ++I G+ K K+
Sbjct: 117 VFD--------GWSQSQSG----------------VSARDVTVWNSMIDGYFKFRRFKEG 152
Query: 212 LECFREMQLSGVAPD--YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSL 269
+ CFR M + GV PD +++ +H M ++SL + + +L
Sbjct: 153 VGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGF-MLRNSLDTDSFLKTAL 211
Query: 270 IDMYARCGCIEIARQVFDGMLHRT-MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
IDMY + G A +VF + ++ +V WN +IVGF +G+ + +L + + +
Sbjct: 212 IDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLV 271
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGC--LVDLYSRAGRLEEALD 386
S+TGAL ACS + G +I V ++ + Y C L+ +YS+ G + EA
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCD---VVKMGLHNDPYVCTSLLSMYSKCGMVGEAET 328
Query: 387 VIKNMPMKPNEV 398
V + K E+
Sbjct: 329 VFSCVVDKRLEI 340
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 226/454 (49%), Gaps = 37/454 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT+ I G + + + M + EVEPN +TL +L C+ V
Sbjct: 392 VVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV---LE 448
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HAY + +D ++ VG +L+D YA S VD A WN + RS
Sbjct: 449 IHAYLLRRHVD-GEMVVGNSLVDAYASSRKVDYA--------------WNVI-----RS- 487
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
R+ I++T+L+ F + H+ AL M G+ D +++
Sbjct: 488 -----------MKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFIS 536
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H + V NSL+DMY++CG +E A++VF+ + +V
Sbjct: 537 ASANLGALETGKHLH-CYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVV 595
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN ++ G A+NG ALS F M+ + EPD V++ L+ACS+ L D GL F M
Sbjct: 596 SWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVM 655
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
K++ I P++EHY LV + RAGRLEEA V++ M +KPN ++ +LL ACR +G + L
Sbjct: 656 KKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSL 715
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
E + + L P + Y+LL+++Y GK + A K R M ++ + KK G S++E+
Sbjct: 716 GEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQG 775
Query: 476 SIYKFVAGDKSH-EENGSIYASLELLSFELQLCG 508
++ FV+ D + ++ IYA +E + E++ G
Sbjct: 776 KVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG 809
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 192/454 (42%), Gaps = 90/454 (19%)
Query: 49 NTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPS 108
N+ WTS ++ R+ + EA TF+ MR ++PNN T +LS C+ +
Sbjct: 283 NSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS---AVR 339
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAK--SGNVDSARLVFDQMGLRNLVSWNT 166
S+ FG +H+ K+G + + VG AL+DMY K + V+++R VF M N+VSW T
Sbjct: 340 SLDFGKQIHSQTIKVGFE-DSTDVGNALVDMYMKCSASEVEASR-VFGAMVSPNVVSWTT 397
Query: 167 MLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSG 222
++ G + G ++D L E R N ++ + ++ K H ++ LE
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLE--------- 448
Query: 223 VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIA 282
+H ++ + + + V NSL+D YA ++ A
Sbjct: 449 --------------------------IHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYA 481
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
V M R +++ S++ F G + ALS N M +G D +S G ++A ++
Sbjct: 482 WNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANL 541
Query: 343 GLIDEG--LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEE----------------- 383
G ++ G L ++ A + LVD+YS+ G LE+
Sbjct: 542 GALETGKHLHCYSVKSGFSGAASVLNS---LVDMYSKCGSLEDAKKVFEEIATPDVVSWN 598
Query: 384 --------------ALDVIKNMPMK---PNEVVLGSLLAACRTK--GEIGLAE-KVMKYL 423
AL + M MK P+ V LL+AC ++GL +VMK +
Sbjct: 599 GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKI 658
Query: 424 VELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
++P + +YV L I G+ + A V M
Sbjct: 659 YNIEPQVE-HYVHLVGILGRAGRLEEATGVVETM 691
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 162/369 (43%), Gaps = 40/369 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
T++WT I+ + + EA + M +A V PN T + LL + + FG T
Sbjct: 190 TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL----GLEFGKT 245
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H+ G+ +N V + T+L+D Y++ ++ A V + G +++ W +++ G
Sbjct: 246 IHSNIIVRGIPLN-VVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG----- 299
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
FV+ K+A+ F EM+ G+ P+ T
Sbjct: 300 --------------------------FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEI-ARQVFDGMLHRTM 294
+H + + +D+ V N+L+DMY +C E+ A +VF M+ +
Sbjct: 334 LCSAVRSLDFGKQIHSQTI-KVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV 392
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
VSW ++I+G +G + M K EP+ V+ +G L ACS + L I
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
+ R R + + LVD Y+ + +++ A +VI++M + N + SL+ G+
Sbjct: 453 LLR-RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDN-ITYTSLVTRFNELGKHE 510
Query: 415 LAEKVMKYL 423
+A V+ Y+
Sbjct: 511 MALSVINYM 519
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 170/405 (41%), Gaps = 51/405 (12%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
AWT I+ +S + A S F M + PN T +++ CA +S+G VH
Sbjct: 91 AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCA---GLRDISYGGRVH 147
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
K G + N V VG++L D+Y+K G +
Sbjct: 148 GSVIKTGFEGNSV-VGSSLSDLYSKCG-------------------------------QF 175
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
++A +LF + ISWT +I V ++AL+ + EM +GV P+ T
Sbjct: 176 KEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGAS 235
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H ++ + + NV + SL+D Y++ +E A +V + + + W
Sbjct: 236 SFLGLEFGKT-IHSNIIVR-GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLW 293
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
S++ GF N A EA+ F M+ G +P+ +Y+ L+ CS +D G +I ++ +
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEI---- 413
V + LVD+Y + E + + PN V +L+ G +
Sbjct: 354 V-GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCF 412
Query: 414 GLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMK 458
GL +++K E++P N V LS + A K VRR ++
Sbjct: 413 GLLMEMVKR--EVEP----NVVTLSGVLRACSKL---RHVRRVLE 448
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 3/233 (1%)
Query: 158 LRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFRE 217
L NL N +L Y+++ I +A +LFDE R +WT +I F K AL F E
Sbjct: 55 LENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEE 114
Query: 218 MQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG 277
M SG P+ T VH V+ + + N V +SL D+Y++CG
Sbjct: 115 MMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVI-KTGFEGNSVVGSSLSDLYSKCG 173
Query: 278 CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALT 337
+ A ++F + + +SW +I EAL F++ M K G P+ ++ L
Sbjct: 174 QFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG 233
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKN 390
A S GL + G I + + VR I + LVD YS+ ++E+A+ V+ +
Sbjct: 234 ASSFLGL-EFGKTIHSNII-VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 259 LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFN 318
L +N+ + N+L+ +Y + I AR++FD M HRT+ +W +I F + ALS F
Sbjct: 54 LLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFE 113
Query: 319 SMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG------CLV 372
M G P+ +++ + +C+ GLR + RV + G L
Sbjct: 114 EMMASGTHPNEFTFSSVVRSCA-------GLRDISYGGRVHGSVIKTGFEGNSVVGSSLS 166
Query: 373 DLYSRAGRLEEALDVIKNM 391
DLYS+ G+ +EA ++ ++
Sbjct: 167 DLYSKCGQFKEACELFSSL 185
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 223/440 (50%), Gaps = 42/440 (9%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W S +A + + EA F M + VE + +T+++LL C + P ++
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCK---SI 350
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + G + N+V + ++++D Y
Sbjct: 351 HGVIIRRGYESNEVAL--------------------------------SSLIDAYTSCSL 378
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
++DA + D ++ +S + +I G +A+ F M+ + P+ +TV
Sbjct: 379 VDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNA 435
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
W H + + + +++ V S++D YA+CG IE+AR+ FD + + ++S
Sbjct: 436 CSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIIS 495
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W II +A NGL D+AL+ F+ M+++G+ P+ V+Y AL+AC+H GL+ +GL IF M
Sbjct: 496 WTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMV 555
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP--MKPNEVVLGSLLAACRTK-GEI 413
P ++HY C+VD+ SRAG ++ A+++IKN+P +K G++L+ CR + ++
Sbjct: 556 EEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKL 614
Query: 414 GLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEI 473
+ +V+ ++EL+P S Y+L S+ +AA W+ +RR +K+R +R G+S +
Sbjct: 615 IITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVRE 674
Query: 474 DSSIYKFVAGDKSHEENGSI 493
+ +F+AGDK + + +
Sbjct: 675 GNLAKRFLAGDKLSQSDSEL 694
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 171/407 (42%), Gaps = 73/407 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
++W+ I + +S + V F M EA+ EP+ +T+ ++L C + G
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED---IDVGR 246
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+VH ++ + G D+ DV V +LIDMY+K FD
Sbjct: 247 SVHGFSIRRGFDLADVFVCNSLIDMYSKG---------FD-------------------- 277
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
++ A ++FDE RN +SW +++ GFV + +ALE F M V D VTV
Sbjct: 278 --VDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLL 335
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H +++ + + V +S SLID Y C ++ A V D M ++ +
Sbjct: 336 RVCKFFEQPLPCKSIHGVIIRRGYESNEVALS-SLIDAYTSCSLVDDAGTVLDSMTYKDV 394
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS-----------HAG 343
VS +++I G A G +DEA+S F M+ P+ ++ L ACS H
Sbjct: 395 VSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGI 451
Query: 344 LIDEGLRIFN---------------KMKRVRRIAPRIEH-----YGCLVDLYSRAGRLEE 383
I L I + ++ RR +I + ++ Y+ G ++
Sbjct: 452 AIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDK 511
Query: 384 ALDVIKNMPMK---PNEVVLGSLLAACRTKGEIGLAEKVMKYLVELD 427
AL + M K PN V + L+AC G + + K +VE D
Sbjct: 512 ALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 151/366 (41%), Gaps = 69/366 (18%)
Query: 79 FVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF-GATVHAYARKLGLDMNDVKVGTALI 137
F ++R EPN TL+ ++ C S+ F G +H Y + G V +++
Sbjct: 115 FSKLRVWGFEPNTSTLVLVIHAC------RSLWFDGEKIHGYVIRSGF-CGISSVQNSIL 167
Query: 138 DMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTA 197
MYA S ++ SAR +FD+M R+++SW+ ++ Y++S E L+LF E
Sbjct: 168 CMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMV--------- 217
Query: 198 LIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQD 257
H+ E PD VTV VH + +
Sbjct: 218 ----------HEAKTE-----------PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRG 256
Query: 258 SLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFF 317
+V V NSLIDMY++ ++ A +VFD R +VSWNSI+ GF N DEAL F
Sbjct: 257 FDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMF 316
Query: 318 NSMQKEGFEPDGVSYTGALTACS-----------HAGLIDEGLR----IFNKMKRVRRIA 362
+ M +E E D V+ L C H +I G + +
Sbjct: 317 HLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSC 376
Query: 363 PRIEHYGCLVDLYS---------------RAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
++ G ++D + AGR +EA+ + +M PN + + SLL AC
Sbjct: 377 SLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNAC 436
Query: 408 RTKGEI 413
++
Sbjct: 437 SVSADL 442
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 14/251 (5%)
Query: 162 VSW----NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFRE 217
+SW N++ D YM+ G++ L+ FD R+++SW ++ G + ++ L F +
Sbjct: 58 LSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK 117
Query: 218 MQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG 277
+++ G P+ T+ +H V+ + V NS++ MYA
Sbjct: 118 LRVWGFEPNTSTLVLVIHACRSLWFDGEK--IHGYVI-RSGFCGISSVQNSILCMYADSD 174
Query: 278 CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGAL 336
+ AR++FD M R ++SW+ +I + + L F M E EPD V+ T L
Sbjct: 175 SLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 337 TACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGC--LVDLYSRAGRLEEALDVIKNMPMK 394
AC+ ID G + +RR + + C L+D+YS+ ++ A V +
Sbjct: 234 KACTVMEDIDVGRSVHG--FSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR 291
Query: 395 PNEVVLGSLLA 405
N V S+LA
Sbjct: 292 -NIVSWNSILA 301
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 218/432 (50%), Gaps = 36/432 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
++ W++ + + ++G+ +EA F RM A ++P+ T++ +L+ C+ + G
Sbjct: 287 SITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS---DICYLEEGKQ 343
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H++ KLG + + + TAL+DMYAK +G
Sbjct: 344 LHSFLLKLGFERH-LFATTALVDMYAK-------------------------------AG 371
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ DA + FD R+ WT+LI G+V+ +++AL +R M+ +G+ P+ T+
Sbjct: 372 CLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 431
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH + + V + ++L MY++CG +E VF ++ +V
Sbjct: 432 ACSSLATLELGKQVHGHTI-KHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN++I G + NG DEAL F M EG EPD V++ ++ACSH G ++ G FN M
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
+ P+++HY C+VDL SRAG+L+EA + I++ + + LL+AC+ G+ L
Sbjct: 551 SDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
+ L+ L S YV LS IY A+G+ +V + M+ G+ K+ G S IE+ +
Sbjct: 611 GVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKN 670
Query: 476 SIYKFVAGDKSH 487
+ FV GD H
Sbjct: 671 QYHVFVVGDTMH 682
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 189/452 (41%), Gaps = 89/452 (19%)
Query: 57 VAWTSSIAHHCRSGQLVEAAST---FVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
V+W S I + ++G + + + F MR ++ PN TL + S S + G
Sbjct: 81 VSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA---ESSLQSSTVG 137
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
HA K+ D+ V T+L+ MY K+G V
Sbjct: 138 RQAHALVVKMS-SFGDIYVDTSLVGMYCKAGLV--------------------------- 169
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECF----REMQLSGVAPDYVT 229
ED L++F P RN +W+ ++ G+ + ++A++ F RE + G DYV
Sbjct: 170 ----EDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKE-EGSDSDYVF 224
Query: 230 VXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM 289
+H + ++ L V +SN+L+ MY++C + A ++FD
Sbjct: 225 TAVLSSLAATIYVGLGRQ-IH-CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSS 282
Query: 290 LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGL 349
R ++W++++ G++ NG + EA+ F+ M G +P + G L ACS ++EG
Sbjct: 283 GDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK 342
Query: 350 RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL---------------------------- 381
++ + + ++ + LVD+Y++AG L
Sbjct: 343 QLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQN 401
Query: 382 ---EEALDVIKNMP---MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELD-----PGG 430
EEAL + + M + PN+ + S+L AC + + L ++V + ++ P G
Sbjct: 402 SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG 461
Query: 431 DSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
+ LS +Y+ G + N V R ++ +
Sbjct: 462 SA----LSTMYSKCGSLEDGNLVFRRTPNKDV 489
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 176/425 (41%), Gaps = 79/425 (18%)
Query: 77 STFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTAL 136
STF + E+ P+ TL+ L+ H+ ++ G VH + G ++ L
Sbjct: 4 STF----QTELNPHTSTLLKKLT---HHSQQRNLVAGRAVHGQIIRTGAS-TCIQHANVL 55
Query: 137 IDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWT 196
++ YAK G + A +F+ + +++VSWN+++ GY ++G I + +
Sbjct: 56 VNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTV------------- 102
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
++ FREM+ + P+ T+ H LV+
Sbjct: 103 ---------------MQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 257 DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSF 316
S D + V SL+ MY + G +E +VF M R +W++++ G+A G +EA+
Sbjct: 148 SSFGD-IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 317 FNSM---QKEGFEPDGV--SYTGALTACSHAGL--------IDEGL-----------RIF 352
FN ++EG + D V + +L A + GL I GL ++
Sbjct: 207 FNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 353 NKMKRVRRIAPRIEHYG--------CLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLG 401
+K + + + G +V YS+ G EA+ + M +KP+E +
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 402 SLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL----LSNIYAAVGKWDGANKVRRAM 457
+L AC + +++ +L++L G ++ L ++YA G A K +
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKL---GFERHLFATTALVDMYAKAGCLADARKGFDCL 383
Query: 458 KDRGI 462
++R +
Sbjct: 384 QERDV 388
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 208/404 (51%), Gaps = 8/404 (1%)
Query: 89 PNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDS 148
P++ T ++L+S C V G H A K G D + V +L+ MY G +D
Sbjct: 116 PDSYTFVSLIS-CIE--KTCCVDSGKMCHGQAIKHGCD-QVLPVQNSLMHMYTCCGALDL 171
Query: 149 ARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHH 208
A+ +F ++ R++VSWN+++ G +R+G++ A +LFDE P +N ISW +I ++ ++
Sbjct: 172 AKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNP 231
Query: 209 KQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNS 268
++ FREM +G + T+ VH + + L +V + +
Sbjct: 232 GVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHA-SLIRTFLNSSVVIDTA 290
Query: 269 LIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
LIDMY +C + +AR++FD + R V+WN +I+ +G + L F +M PD
Sbjct: 291 LIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPD 350
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
V++ G L C+ AGL+ +G ++ M +I P H C+ +LYS AG EEA + +
Sbjct: 351 EVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEAL 410
Query: 389 KNMP---MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVG 445
KN+P + P +LL++ R G L E + K L+E DP Y LL NIY+ G
Sbjct: 411 KNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTG 470
Query: 446 KWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEE 489
+W+ N+VR +K+R I + PG +++ ++ G K E+
Sbjct: 471 RWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCKEAEK 514
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
++W I+ + + + S F M A + N TL+ LL+ C + + G +V
Sbjct: 216 ISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR---SARLKEGRSV 272
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA + L+ + V + TALIDMY K V AR +FD + +RN V+WN M+ + G
Sbjct: 273 HASLIRTFLN-SSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGR 331
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKD 206
E L+LF+ A+I G ++ D
Sbjct: 332 PEGGLELFE-----------AMINGMLRPD 350
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 234/468 (50%), Gaps = 7/468 (1%)
Query: 39 NTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLL 98
+ +++ S+ + T++W + IA + ++G EA V M E ++ + + +L
Sbjct: 208 DIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Query: 99 SGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL 158
+ + S S+ G VHA K G N V + ++D+Y K GN+ A G
Sbjct: 268 NVLS---SLKSLKIGKEVHARVLKNGSYSNKF-VSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 159 RNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM 218
NL S ++M+ GY G++ +A +LFD +N + WTA+ G++ LE R
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 219 QLSGV-APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG 277
+ PD + + +H + L D ++ + +DMY++CG
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDK-KLVTAFVDMYSKCG 442
Query: 278 CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALT 337
+E A ++FD R V +N++I G A +G ++ F M + GF+PD +++ L+
Sbjct: 443 NVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLS 502
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM-PMKPN 396
AC H GL+ EG + F M I+P HY C++DLY +A RL++A+++++ + ++ +
Sbjct: 503 ACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKD 562
Query: 397 EVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRA 456
V+LG+ L AC L ++V + L+ ++ S Y+ ++N YA+ G+WD ++R
Sbjct: 563 AVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQ 622
Query: 457 MKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFEL 504
M+ + + G S ID + F + D SH E +IYA L ++ +L
Sbjct: 623 MRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDL 670
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 136 LIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPV-RNAIS 194
L+++Y+KSG + AR VFD+M RN+ SWN ++ Y++ +++A +LF+ R+ I+
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLIT 88
Query: 195 WTALIGGFVKKDH-HKQALECFREM---QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVH 250
+ L+ GF K D +A+E F EM + + D TV +H
Sbjct: 89 YNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH 148
Query: 251 RLVMTQDSLKDNVRVSNSLIDMYARCG------------CIE----------IARQVFDG 288
+++ + VS SLI MY++CG C+E IA +G
Sbjct: 149 GVLVKTGNDGTKFAVS-SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREG 207
Query: 289 MLHRTM------------VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGAL 336
+ + + +SWN++I G+A NG +EAL SM++ G + D S+ L
Sbjct: 208 DIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Query: 337 TACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
S + G + ++ + + + G +VD+Y + G ++ A
Sbjct: 268 NVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG-IVDVYCKCGNMKYA 314
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 44/237 (18%)
Query: 266 SNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGF 325
SN L+++Y++ G + AR VFD ML R + SWN++I + EA F S +
Sbjct: 26 SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFES---DNC 82
Query: 326 EPDGVSYTGALTACSHA-GLIDEGLRIFNKMKR---------------VRRIAPRIEH-- 367
E D ++Y L+ + G E + +F +M R + +++ ++ +
Sbjct: 83 ERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF 142
Query: 368 YG--------------------CLVDLYSRAGRLEEALDVIKNMPMK-PNEVVLGSLLAA 406
YG L+ +YS+ G+ +E ++ ++ + V +++AA
Sbjct: 143 YGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAA 202
Query: 407 CRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
+G+I A V EL+ N ++ YA G + A K+ +M++ G++
Sbjct: 203 YCREGDIDKALSVFWRNPELNDTISWNTLIAG--YAQNGYEEEALKMAVSMEENGLK 257
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 225/455 (49%), Gaps = 39/455 (8%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
H ++WT+ IA + ++ VEA F + + +E + + L ++L + S V
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
+H + + GL D + L+D+Y K N+ GY
Sbjct: 508 ---EIHCHILRKGL--LDTVIQNELVDVYGKCRNM-----------------------GY 539
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
A ++F+ ++ +SWT++I + +A+E FR M +G++ D V +
Sbjct: 540 --------ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQD-SLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H ++ + L+ ++ V+ ++DMYA CG ++ A+ VFD +
Sbjct: 592 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA--VVDMYACCGDLQSAKAVFDRIE 649
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ ++ + S+I + +G A+ F+ M+ E PD +S+ L ACSHAGL+DEG
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRG 709
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
M+ + P EHY CLVD+ RA + EA + +K M +P V +LLAACR+
Sbjct: 710 FLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSH 769
Query: 411 GEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
E + E + L+EL+P N VL+SN++A G+W+ KVR MK G+ K PG S
Sbjct: 770 SEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSW 829
Query: 471 IEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQ 505
IE+D ++KF A DKSH E+ IY L ++ +L+
Sbjct: 830 IEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 34/281 (12%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
AW + I + +G+ A + + MR V + LL CA S G+ +H
Sbjct: 149 AWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS---GSELH 205
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
+ KLG V AL+ MYAK+ ++ +AR +FD G+ G
Sbjct: 206 SLLVKLGYHSTGFIV-NALVSMYAKNDDLSAARRLFD---------------GFQEKG-- 247
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
+A+ W +++ + + LE FREM ++G AP+ T+
Sbjct: 248 -------------DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 294
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H V+ + + V N+LI MY RCG + A ++ M + +V+W
Sbjct: 295 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW 354
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTA 338
NS+I G+ N + EAL FF+ M G + D VS T + A
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 168/417 (40%), Gaps = 56/417 (13%)
Query: 30 NPTFSPYNPNTNQSFSLR--HNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEV 87
N S Y N + S + R + V W S ++ + SG+ +E F M
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 88 EPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVD 147
PN+ T+++ L+ C + S G +HA K +++ V ALI MY
Sbjct: 281 APNSYTIVSALTACDGF---SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYT------ 331
Query: 148 SARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDH 207
R G++ A ++ + + ++W +LI G+V+
Sbjct: 332 -------------------------RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 208 HKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSN 267
+K+ALE F +M +G D V++ +H V+ + N++V N
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI-KHGWDSNLQVGN 425
Query: 268 SLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEP 327
+LIDMY++C + F M + ++SW ++I G+A N EAL F + K+ E
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 328 DGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGC--------LVDLYSRAG 379
D + L A S + M V+ I I G LVD+Y +
Sbjct: 486 DEMILGSILRASS----------VLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCR 535
Query: 380 RLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL 436
+ A V +++ K + V S++++ G A ++ + +VE DS +L
Sbjct: 536 NMGYATRVFESIKGK-DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 20/354 (5%)
Query: 105 PSPSSVSFGATVHAYARKLGLDMND--VKVGTALIDMYAKSGNVDSARLVFDQMGLRNLV 162
PSP F + ++L + N+ V+ ++++ K V R + ++ +
Sbjct: 53 PSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRI-FKTFP 111
Query: 163 SWNT-MLDG-----YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFR 216
S+ L G Y + G ++DA ++FDE P R A +W +IG +V AL +
Sbjct: 112 SFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYW 171
Query: 217 EMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC 276
M++ GV + +H L + + + N+L+ MYA+
Sbjct: 172 NMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSL-LVKLGYHSTGFIVNALVSMYAKN 230
Query: 277 GCIEIARQVFDGMLHR-TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
+ AR++FDG + V WNSI+ ++ +G + E L F M G P+ + A
Sbjct: 231 DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSA 290
Query: 336 LTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKP 395
LTAC G I + + + + L+ +Y+R G++ +A +++ M
Sbjct: 291 LTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NA 349
Query: 396 NEVVLGSLLAACRTKGEIG--LAEKVMKYLVELDPGG-DSNYVLLSNIYAAVGK 446
+ V SL+ KG + + ++ +++ ++ G S+ V +++I AA G+
Sbjct: 350 DVVTWNSLI-----KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 172/421 (40%), Gaps = 74/421 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V W S I + ++ EA F M A + + +++ ++++ S++ G
Sbjct: 351 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL---SNLLAGME 407
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HAY K G D N ++VG LIDMY+K F +M ++L+SW T++ GY
Sbjct: 408 LHAYVIKHGWDSN-LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGY---- 462
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ D H +ALE FR++ + D + +
Sbjct: 463 ---------------------------AQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H ++ + L D V + N L+D+Y +C + A +VF+ + + +V
Sbjct: 496 ASSVLKSMLIVKEIHCHIL-RKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVV 553
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SW S+I A NG EA+ F M + G D V+ L+A + +++G I +
Sbjct: 554 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 356 KRV------RRIAPRIEHYGCLVDLYS---------RAGRLE------------------ 382
R ++ Y C DL S R G L+
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 383 EALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE---KVMKYLVELDPGGDSNYVLLSN 439
E D +++ + P+ + +LL AC G + K+M++ EL+P + +YV L +
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPE-HYVCLVD 732
Query: 440 I 440
+
Sbjct: 733 M 733
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 186/332 (56%), Gaps = 7/332 (2%)
Query: 142 KSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGG 201
K G +L+ + +G N+V +++LD Y + G + +A Q+F+ +N++SW+AL+GG
Sbjct: 282 KQGKEIHGKLITNGIG-SNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGG 340
Query: 202 FVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKD 261
+ + H++A+E FREM+ D +H + +
Sbjct: 341 YCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF-G 395
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
NV V ++LID+Y + GCI+ A +V+ M R M++WN+++ A NG +EA+SFFN M
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL 381
K+G +PD +S+ LTAC H G++DEG F M + I P EHY C++DL RAG
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLF 515
Query: 382 EEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG-LAEKVMKYLVELDPGGDSNYVLLSNI 440
EEA ++++ + + + G LL C + +AE++ K ++EL+P +YVLLSN+
Sbjct: 516 EEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNM 575
Query: 441 YAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
Y A+G+ A +R+ M RG+ K G S I+
Sbjct: 576 YKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 175/417 (41%), Gaps = 53/417 (12%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
++WTS ++ + + V+A FV M ++ N TL + + C+ V G
Sbjct: 129 ISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSEL---GEVRLGRCF 185
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H G + N + + L +Y G R E
Sbjct: 186 HGVVITHGFEWNHF-ISSTLAYLY-----------------------------GVNR--E 213
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLS-GVAPDYVTVXXXXX 235
DA ++FDE P + I WTA++ F K D +++AL F M G+ PD T
Sbjct: 214 PVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLT 273
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H ++T + + NV V +SL+DMY +CG + ARQVF+GM + V
Sbjct: 274 ACGNLRRLKQGKEIHGKLIT-NGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSV 332
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SW++++ G+ NG ++A+ F M+ E D + L AC+ + G I +
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQY 388
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
R R + L+DLY ++G ++ A V M ++ N + ++L+A G
Sbjct: 389 VR-RGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGR--- 443
Query: 416 AEKVMKYLVEL-DPGGDSNYVLLSNIYAAVGKW----DGANKVRRAMKDRGIRKKPG 467
E+ + + ++ G +Y+ I A G +G N K GI KPG
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI--KPG 498
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 166/391 (42%), Gaps = 47/391 (12%)
Query: 47 RHNTKHTD----PTVAWT-----SSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITL 97
RH ++H P+++ + S I C+ GQL EA +E+ +L
Sbjct: 8 RHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASL 67
Query: 98 LSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMG 157
L C S G HA+ K GL+ D VG +L+ +Y K G G
Sbjct: 68 LQTC---NKVFSFIHGIQFHAHVVKSGLE-TDRNVGNSLLSLYFKLGP-----------G 112
Query: 158 LRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFRE 217
+R + ++FD V++AISWT+++ G+V H +ALE F E
Sbjct: 113 MR-------------------ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVE 153
Query: 218 MQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG 277
M G+ + T+ H +V+T + N +S++L +Y
Sbjct: 154 MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITH-GFEWNHFISSTLAYLYGVNR 212
Query: 278 CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK-EGFEPDGVSYTGAL 336
AR+VFD M ++ W +++ F+ N L +EAL F +M + +G PDG ++ L
Sbjct: 213 EPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVL 272
Query: 337 TACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPN 396
TAC + + +G I K+ I + L+D+Y + G + EA V M K N
Sbjct: 273 TACGNLRRLKQGKEIHGKLI-TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKN 330
Query: 397 EVVLGSLLAACRTKGEIGLAEKVMKYLVELD 427
V +LL GE A ++ + + E D
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEEKD 361
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 40/253 (15%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+V+W++ + +C++G+ +A F M E ++ T+L CA ++V G
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACA---GLAAVRLGKE 383
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H + G +V V +ALID+Y KSG +DSA V+ +M +RN+++WN ML ++G
Sbjct: 384 IHGQYVRRGC-FGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
E+A+ F++ VKK G+ PDY++
Sbjct: 443 RGEEAVSFFND---------------MVKK----------------GIKPDYISFIAILT 471
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
L+ +K + +ID+ R G E A + + R
Sbjct: 472 ACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDA 531
Query: 296 S-WNSIIVGFAAN 307
S W ++ AAN
Sbjct: 532 SLWGVLLGPCAAN 544
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 225/442 (50%), Gaps = 41/442 (9%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
VAW S I+ + G +++A F +M ++P+ TL + +S C + V G +
Sbjct: 371 VAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISAC---ENAGLVPLGKQI 427
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + + D++D V +LIDMY+K SG
Sbjct: 428 HGHVIRT--DVSDEFVQNSLIDMYSK-------------------------------SGS 454
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
++ A +F++ R+ ++W +++ GF + + +A+ F M S + + VT
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQA 514
Query: 237 XXXXXXXXXXXWVH-RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
WVH +L+++ LKD + +LIDMYA+CG + A VF M R++V
Sbjct: 515 CSSIGSLEKGKWVHHKLIIS--GLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SW+S+I + +G A+S FN M + G +P+ V + L+AC H+G ++EG FN M
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM 631
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
K ++P EH+ C +DL SR+G L+EA IK MP + V GSL+ CR ++ +
Sbjct: 632 KSFG-VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDI 690
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
+ + L ++ Y LLSNIYA G+W+ ++R AMK ++K PG+S+IEID
Sbjct: 691 IKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQ 750
Query: 476 SIYKFVAGDKSHEENGSIYASL 497
+++F AG+++ + IY L
Sbjct: 751 KVFRFGAGEENRIQTDEIYRFL 772
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 181/389 (46%), Gaps = 41/389 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+WT+ I+ + R +A +F M ++ +EPN +TL ++LS C + G +V
Sbjct: 269 VSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLI---GLIREGKSV 325
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H +A + LD N + AL+++YA+ G + +
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGKLS----------------------------D 357
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
E L++ + RN ++W +LI + + QAL FR+M + PD T+
Sbjct: 358 CETVLRVVSD---RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H V+ D + V+ NSLIDMY++ G ++ A VF+ + HR++V+
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQ--NSLIDMYSKSGSVDSASTVFNQIKHRSVVT 472
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WNS++ GF+ NG + EA+S F+ M E + V++ + ACS G +++G + +K+
Sbjct: 473 WNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL- 531
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+ + L+D+Y++ G L A V + M + S++ A G IG A
Sbjct: 532 -IISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS-SMINAYGMHGRIGSA 589
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVG 445
+VE G N V+ N+ +A G
Sbjct: 590 ISTFNQMVE--SGTKPNEVVFMNVLSACG 616
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 190/435 (43%), Gaps = 71/435 (16%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
VAW++ ++ +G++V+A F M + VEP+ +T+I+++ GCA + +V
Sbjct: 168 VAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAEL---GCLRIARSV 224
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + D+++ + +L+ MY+K G++ S+
Sbjct: 225 HGQITRKMFDLDET-LCNSLLTMYSKCGDLLSSE-------------------------- 257
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
++F++ +NA+SWTA+I + + + ++AL F EM SG+ P+ VT+
Sbjct: 258 -----RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
VH + ++ + +S +L+++YA CG + V + R +V+
Sbjct: 313 CGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVA 372
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WNS+I +A G+ +AL F M + +PD + +++AC +AGL+ G +I +
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP------------------------ 392
R +++ L+D+YS++G ++ A V +
Sbjct: 433 RTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAI 490
Query: 393 ----------MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYA 442
++ NEV +++ AC + G + + V L+ L ++YA
Sbjct: 491 SLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYA 550
Query: 443 AVGKWDGANKVRRAM 457
G + A V RAM
Sbjct: 551 KCGDLNAAETVFRAM 565
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 160/399 (40%), Gaps = 76/399 (19%)
Query: 104 YPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVS 163
+ S SS+ + +HA+ G D T LI+ YA G+ DS+RLVF+ +
Sbjct: 8 FRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFM 67
Query: 164 WNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
+ ++ + ++ A+ L+ +S T I FV + + + G
Sbjct: 68 YGVLIKCNVWCHLLDAAIDLYHRL-----VSETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
VH ++ + + D+ + SL+ MY + G + A
Sbjct: 123 -------------------------VHGRII-KGGVDDDAVIETSLLCMYGQTGNLSDAE 156
Query: 284 QVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
+VFDGM R +V+W++++ NG +AL F M +G EPD V+ + C+ G
Sbjct: 157 KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 344 LI-----------------DEGL------------------RIFNKMKRVRRIAPRIEHY 368
+ DE L RIF K+ + ++ +
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS-----W 271
Query: 369 GCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLV- 424
++ Y+R E+AL M ++PN V L S+L++C G I + V + V
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331
Query: 425 -ELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
ELDP +S + L +YA GK V R + DR I
Sbjct: 332 RELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 229/465 (49%), Gaps = 49/465 (10%)
Query: 57 VAWTSSIA--HHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPS----PSSV 110
V W S IA C G+ +A F+RM V + TL+ + S Y S P+ V
Sbjct: 227 VTWNSMIAAFQCCNLGK--KAIGVFMRMHSDGVGFDRATLLNICSSL--YKSSDLVPNEV 282
Query: 111 SFGA-TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLD 169
S +H+ K GL + +V TALI +Y++ ML+
Sbjct: 283 SKCCLQLHSLTVKSGL-VTQTEVATALIKVYSE------------------------MLE 317
Query: 170 GYMRSGEIEDALQLFDEFP-VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
Y D +LF E R+ ++W +I F D ++A+ F +++ ++PD+
Sbjct: 318 DY------TDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWY 370
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T +H V+ L D V ++NSLI YA+CG +++ +VFD
Sbjct: 371 TFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV-LNNSLIHAYAKCGSLDLCMRVFDD 429
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
M R +VSWNS++ ++ +G D L F QK PD ++ L+ACSHAG ++EG
Sbjct: 430 MDSRDVVSWNSMLKAYSLHGQVDSILPVF---QKMDINPDSATFIALLSACSHAGRVEEG 486
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACR 408
LRIF M P++ HY C++D+ SRA R EA +VIK MPM P+ VV +LL +CR
Sbjct: 487 LRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCR 546
Query: 409 TKGEIGLAEKVMKYLVEL-DPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPG 467
G L + L EL +P +Y+ +SNIY A G ++ AN + M+ +RK+P
Sbjct: 547 KHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPD 606
Query: 468 FSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
S EI + +++F +G + + ++Y L+ L L+ GYVP+
Sbjct: 607 LSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPE 651
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 159 RNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM 218
+N++ N +++ Y + G I A Q+FD P RN +SWTALI G+V+ + ++ F M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 219 QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC-- 276
LS P+ T+ VH L + + L ++ V+N++I MY RC
Sbjct: 154 -LSHCFPNEFTLSSVLTSCRYEPGKQ----VHGLAL-KLGLHCSIYVANAVISMYGRCHD 207
Query: 277 -GCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
A VF+ + + +V+WNS+I F L +A+ F M +G G
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV---GFDRATL 264
Query: 336 LTACS 340
L CS
Sbjct: 265 LNICS 269
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 250 HRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGL 309
H ++ NV ++N LI+MYA+CG I ARQVFD M R +VSW ++I G+ G
Sbjct: 83 HHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGN 142
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
E F+SM F P+ + + LT+C +
Sbjct: 143 EQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY 173
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 213/423 (50%), Gaps = 39/423 (9%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVR-MREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+WT+ I+ C + Q E R M+ + PN +TL+++L C SS+
Sbjct: 217 VSWTAMISG-CVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV--KE 273
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H ++ + G D ++ A + MY + GNV +R+
Sbjct: 274 IHGFSFRHGCHA-DERLTAAFMTMYCRCGNVSLSRV------------------------ 308
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
LF+ VR+ + W+++I G+ + + + +M+ G+ + VT+
Sbjct: 309 -------LFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVS 361
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH ++ + ++ + N+LIDMYA+CG + AR+VF + + +V
Sbjct: 362 ACTNSTLLSFASTVHSQIL-KCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV 420
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SW+S+I + +G EAL F M K G E D +++ L+AC+HAGL++E IF +
Sbjct: 421 SWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQA 480
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
+ + +EHY C ++L R G++++A +V NMPMKP+ + SLL+AC T G + +
Sbjct: 481 GKY-HMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 416 AEKVM-KYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
A K++ L++ +P +NYVLLS I+ G + A +VRR M+ R + K GFS IE +
Sbjct: 540 AGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPE 599
Query: 475 SSI 477
I
Sbjct: 600 LQI 602
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 151/346 (43%), Gaps = 41/346 (11%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
H D TV++ S I C+ G L EA M P + + +LL+ C S S V+
Sbjct: 110 HRD-TVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVA 168
Query: 112 --FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLD 169
F A V R V + TAL+DMY K FD
Sbjct: 169 RMFHALVLVDERM----QESVLLSTALVDMYLK----------FDDHA------------ 202
Query: 170 GYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
A +FD+ V+N +SWTA+I G V +++ ++ FR MQ + P+ VT
Sbjct: 203 ---------AAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 230 VXXXX-XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
+ +H D R++ + + MY RCG + ++R +F+
Sbjct: 254 LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADE-RLTAAFMTMYCRCGNVSLSRVLFET 312
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
R +V W+S+I G+A G E ++ N M+KEG E + V+ ++AC+++ L+
Sbjct: 313 SKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFA 372
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
+ +++ + ++ I L+D+Y++ G L A +V + K
Sbjct: 373 STVHSQILKCGFMS-HILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Query: 50 TKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSS 109
T V W+S I+ + +G E + +MR+ +E N++TL+ ++S C + +
Sbjct: 312 TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACT---NSTL 368
Query: 110 VSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLD 169
+SF +TVH+ K G M+ + +G ALIDMYAK G++ +AR VF ++ ++LVSW++M++
Sbjct: 369 LSFASTVHSQILKCGF-MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMIN 427
Query: 170 GYMRSGEIEDALQLF 184
Y G +AL++F
Sbjct: 428 AYGLHGHGSEALEIF 442
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 167/439 (38%), Gaps = 86/439 (19%)
Query: 69 SGQLVEAASTFVRMREAEVEPNNITLI--TLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
S Q + A +++ + N T I +++ CA P GA +H K G D
Sbjct: 22 SDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEP--FLLGAQLHCLCLKAGAD 79
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDE 186
+ V V +LI MYAK + R ++FDE
Sbjct: 80 CDTV-VSNSLISMYAKFSRKYAVR-------------------------------KVFDE 107
Query: 187 FPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXX-XXXXX 245
R+ +S+ ++I + +A++ +EM G P V
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKV 167
Query: 246 XXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFA 305
H LV+ + ++++V +S +L+DMY + A VFD M + VSW ++I G
Sbjct: 168 ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCV 227
Query: 306 ANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC------------------SHAGLIDE 347
AN + + F +MQ+E P+ V+ L AC H DE
Sbjct: 228 ANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADE 287
Query: 348 GL-----------------RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKN 390
L R+ + +VR + + ++ Y+ G E ++++
Sbjct: 288 RLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVM----WSSMISGYAETGDCSEVMNLLNQ 343
Query: 391 MP---MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSN----IYAA 443
M ++ N V L ++++AC + A V +++ G +++LL N +YA
Sbjct: 344 MRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC---GFMSHILLGNALIDMYAK 400
Query: 444 VGKWDGANKVRRAMKDRGI 462
G A +V + ++ +
Sbjct: 401 CGSLSAAREVFYELTEKDL 419
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 217/450 (48%), Gaps = 37/450 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+ WT+ + ++G+ ++A + M+ + + ++ LL G +
Sbjct: 182 VICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDL---GDTKMGRS 238
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH Y + GL MN V V T+L+DMYAK G
Sbjct: 239 VHGYLYRTGLPMN-VVVETSLVDMYAKV-------------------------------G 266
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
IE A ++F + A+SW +LI GF + +A E EMQ G PD VT+
Sbjct: 267 FIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLV 326
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH ++ + L D V + +L+DMY++CG + +R++F+ + + +V
Sbjct: 327 ACSQVGSLKTGRLVHCYILKRHVL-DRV-TATALMDMYSKCGALSSSREIFEHVGRKDLV 384
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
WN++I + +G E +S F M + EPD ++ L+A SH+GL+++G F+ M
Sbjct: 385 CWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVM 444
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGL 415
+I P +HY CL+DL +RAGR+EEALD+I + + + +LL+ C + +
Sbjct: 445 INKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSV 504
Query: 416 AEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
+ +++L+P L+SN +A KW KVR+ M++ + K PG+S+IE++
Sbjct: 505 GDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNG 564
Query: 476 SIYKFVAGDKSHEENGSIYASLELLSFELQ 505
+ F+ D SH E+ + L L E++
Sbjct: 565 ELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 44/318 (13%)
Query: 118 AYARKL--GLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM------------------- 156
+YARK+ L V V ++I +Y++ N D ++DQM
Sbjct: 67 SYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKAC 126
Query: 157 -------------------GLRN-LVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWT 196
G +N + +++L+ YM+ G++++A LF + R+ I WT
Sbjct: 127 LSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWT 186
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
++ GF + +A+E +REMQ G D V + VH + +
Sbjct: 187 TMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGY-LYR 245
Query: 257 DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSF 316
L NV V SL+DMYA+ G IE+A +VF M+ +T VSW S+I GFA NGLA++A
Sbjct: 246 TGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEA 305
Query: 317 FNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYS 376
MQ GF+PD V+ G L ACS G + G R+ + R + R+ L+D+YS
Sbjct: 306 VVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG-RLVHCYILKRHVLDRVTATA-LMDMYS 363
Query: 377 RAGRLEEALDVIKNMPMK 394
+ G L + ++ +++ K
Sbjct: 364 KCGALSSSREIFEHVGRK 381
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 10/260 (3%)
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD--YVTV 230
R GEI A ++FDE P R + ++I + + + + L + +M + PD T+
Sbjct: 62 RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTM 121
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
W + K++V V +S++++Y +CG ++ A +F M
Sbjct: 122 TIKACLSGLVLEKGEAVWCKAV---DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMA 178
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
R ++ W +++ GFA G + +A+ F+ MQ EGF D V G L A G G
Sbjct: 179 KRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRS 238
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
+ + R + + LVD+Y++ G +E A V M K V GSL++
Sbjct: 239 VHGYLYRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFK-TAVSWGSLISGF--- 293
Query: 411 GEIGLAEKVMKYLVELDPGG 430
+ GLA K + +VE+ G
Sbjct: 294 AQNGLANKAFEAVVEMQSLG 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
+H V++ +L + +S LI R G I AR+VFD + R + +NS+IV ++
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY 368
DE L ++ M E +PD ++T + AC ++++G ++ K + + +
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCK---AVDFGYKNDVF 152
Query: 369 GC--LVDLYSRAGRLEEA 384
C +++LY + G+++EA
Sbjct: 153 VCSSVLNLYMKCGKMDEA 170
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 220/431 (51%), Gaps = 40/431 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
TV+W S + + SG+L EA F ++ P +VS+
Sbjct: 170 TVSWNSLLHGYLESGELDEARRVFDKI----------------------PEKDAVSWNLI 207
Query: 116 VHAYARK----------LGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWN 165
+ +YA+K + + LI Y + AR FD M +N VSW
Sbjct: 208 ISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWI 267
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM--QLSGV 223
TM+ GY + G+++ A +LF ++ + + A+I + + K AL+ F +M + S +
Sbjct: 268 TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYI 327
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
PD +T+ WV + T+ +K + +S SLID+Y + G A
Sbjct: 328 QPDEITLSSVVSANSQLGNTSFGTWVESYI-TEHGIKIDDLLSTSLIDLYMKGGDFAKAF 386
Query: 284 QVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
++F + + VS++++I+G NG+A EA S F +M ++ P+ V++TG L+A SH+G
Sbjct: 387 KMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSG 446
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSL 403
L+ EG + FN MK + P +HYG +VD+ RAGRLEEA ++IK+MPM+PN V G+L
Sbjct: 447 LVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGAL 505
Query: 404 LAACRTKGEIGLAEKVMKYLVEL--DPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRG 461
L A + E + V+L DP G ++ L+ IY++VG+WD A VR ++K++
Sbjct: 506 LLASGLHNNVEFGEIACSHCVKLETDPTGYLSH--LAMIYSSVGRWDDARTVRDSIKEKK 563
Query: 462 IRKKPGFSSIE 472
+ K G S +E
Sbjct: 564 LCKTLGCSWVE 574
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 178/456 (39%), Gaps = 86/456 (18%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+ +W + + + E ++ M + + P++ + ++L C ++ G
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM---ENMVDGKP 125
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA A K GL V V T L+ +Y++ G ++ A+ FD + +N VSWN++L GY+ SG
Sbjct: 126 IHAQALKNGL-CGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESG 184
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
E+++A ++FD+ P ++A+SW +I + KK A F M L A
Sbjct: 185 ELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPAS---------- 234
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
W N LI Y C +++AR FD M + V
Sbjct: 235 ------------W------------------NILIGGYVNCREMKLARTYFDAMPQKNGV 264
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SW ++I G+ G A F M K+ D + Y + + G + L++F +M
Sbjct: 265 SWITMISGYTKLGDVQSAEELFRLMSKK----DKLVYDAMIACYTQNGKPKDALKLFAQM 320
Query: 356 -KRVRRIAPR----------------------IEHY-------------GCLVDLYSRAG 379
+R I P +E Y L+DLY + G
Sbjct: 321 LERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGG 380
Query: 380 RLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELD-PGGDSNYVLLS 438
+A + N+ K + V +++ C G A + ++E P + L
Sbjct: 381 DFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLL 439
Query: 439 NIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
+ Y+ G K +MKD + I +D
Sbjct: 440 SAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVD 475
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 14/285 (4%)
Query: 182 QLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXX 241
++ F ++ SW L+ + K+ ++ + +M SG+ P V
Sbjct: 59 RILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKME 118
Query: 242 XXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSII 301
+H + ++ L V V L+ +Y+R G IE+A++ FD + + VSWNS++
Sbjct: 119 NMVDGKPIHAQAL-KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 302 VGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRI 361
G+ +G DEA F+ + E D VS+ +++ + G + +F+ M
Sbjct: 178 HGYLESGELDEARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 362 APRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMK 421
+ I L+ Y ++ A MP K N V ++++ G++ AE++ +
Sbjct: 234 SWNI-----LIGGYVNCREMKLARTYFDAMPQK-NGVSWITMISGYTKLGDVQSAEELFR 287
Query: 422 YLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKP 466
+ + D Y + Y GK A K+ M +R +P
Sbjct: 288 LMSKKD---KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 226/459 (49%), Gaps = 48/459 (10%)
Query: 54 DP-TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAH-YPSPSSVS 111
DP ++W S ++ + +SG+ E F+ + ++V PN + L+ CA + SP
Sbjct: 118 DPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSP---- 173
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNT----- 166
GA +H+ KLGL+ +V VG LIDMY K G +D A LVF M ++ VSWN
Sbjct: 174 LGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASC 233
Query: 167 --------------------------MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIG 200
++D +++SG+ +A Q+ + P N+ SW ++
Sbjct: 234 SRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILT 293
Query: 201 GFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLK 260
G+V + +A E F +M SGV D ++ +H + L
Sbjct: 294 GYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACA-HKLGLD 352
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM 320
V V+++LIDMY++CG ++ A +F M + ++ WN +I G+A NG + EA+ FN +
Sbjct: 353 SRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412
Query: 321 QKEGF-EPDGVSYTGALTACSHAGL-IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
++E F +PD ++ L CSH + ++ L F M RI P +EH L+ +
Sbjct: 413 KQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQR 472
Query: 379 GRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSN----- 433
G + +A VI+ + V +LL AC + ++ A+ V ++EL GD++
Sbjct: 473 GEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIEL---GDADKDEYL 529
Query: 434 YVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
Y+++SN+YA +W ++R+ M++ G+ K+ G S I+
Sbjct: 530 YIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 143/352 (40%), Gaps = 45/352 (12%)
Query: 40 TNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLS 99
+ +F+ R + T + +W++ + R G + + + + E +P+ L+ LL
Sbjct: 5 VSNAFTTRSHVGSTASSNSWSTIVPALARFGSIGVLRAAVELINDGE-KPDASPLVHLLR 63
Query: 100 GCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR 159
+Y VS +H Y K G V + RL
Sbjct: 64 VSGNY---GYVSLCRQLHGYVTKHGF--------------------VSNTRLS------- 93
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
N+++ Y S +EDA ++FDE P + ISW +L+ G+V+ ++ + F E+
Sbjct: 94 -----NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELH 148
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
S V P+ + +H ++ K NV V N LIDMY +CG +
Sbjct: 149 RSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFM 208
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
+ A VF M + VSWN+I+ + NG + L FF+ M PD V+Y + A
Sbjct: 209 DDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYNELIDAF 264
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
+G + ++ + M P + ++ Y + + EA + M
Sbjct: 265 VKSGDFNNAFQVLSDMPN-----PNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+T+ N R+SNSL+ Y +E A +VFD M ++SWNS++ G+ +G E
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVD 373
+ F + + P+ S+T AL AC+ L G I +K+ ++ + CL+D
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 374 LYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+Y + G +++A+ V ++M K + V +++A+C G++ L
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLELG 242
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 201/397 (50%), Gaps = 46/397 (11%)
Query: 90 NNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSA 149
N T + +L CA S S++ G VH +KLG +GT L+ YAK+G
Sbjct: 107 NERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNG----- 161
Query: 150 RLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFV----KK 205
++ A ++FDE P R +++W A+IGG+ K
Sbjct: 162 --------------------------DLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKG 195
Query: 206 DHH-KQALECFREMQL--SGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKD- 261
+H+ ++A+ FR SGV P T+ VH + +
Sbjct: 196 NHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEV 255
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
+V + +L+DMY++CGC+ A VF+ M + + +W S+ G A NG +E + N M
Sbjct: 256 DVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMA 315
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL 381
+ G +P+ +++T L+A H GL++EG+ +F MK + P IEHYGC+VDL +AGR+
Sbjct: 316 ESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRI 375
Query: 382 EEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS-------NY 434
+EA I MP+KP+ ++L SL AC GE + E++ K L+E++ + +Y
Sbjct: 376 QEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDY 435
Query: 435 VLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
V LSN+ A GKW K+R+ MK+R I+ +PG+S +
Sbjct: 436 VALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 203/417 (48%), Gaps = 37/417 (8%)
Query: 55 PTV-AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
P+V AW + ++ + EA S F +M+ ++P+ TL +LS CA + G
Sbjct: 379 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL---RFLEGG 435
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
+H + + N + + LI +Y++ ++ + +FD
Sbjct: 436 KQIHGVVIRTEISKNS-HIVSGLIAVYSECEKMEISECIFD------------------- 475
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV-APDYVTVXX 232
D + D W ++I GF +AL FR M + V P+ +
Sbjct: 476 -----DCINELD------IACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFAT 524
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
H LV+ + D+ V +L DMY +CG I+ ARQ FD +L +
Sbjct: 525 VLSSCSRLCSLLHGRQFHGLVVKSGYVSDSF-VETALTDMYCKCGEIDSARQFFDAVLRK 583
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
V WN +I G+ NG DEA+ + M G +PDG+++ LTACSH+GL++ GL I
Sbjct: 584 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEIL 643
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+ M+R+ I P ++HY C+VD RAGRLE+A + + P K + V+ LL++CR G+
Sbjct: 644 SSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGD 703
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
+ LA +V + L+ LDP + YVLLSN Y+++ +WD + ++ M + K PG S
Sbjct: 704 VSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 203/484 (41%), Gaps = 92/484 (19%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLS------GCAHYPSPSSV 110
V++T+ I R +++EA F M E V+ +++ L +LS GC
Sbjct: 206 VSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGN 265
Query: 111 SFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDG 170
G +H A +LG D+ + +L+++YAK+ +++ A L+F +M N+VSWN M+ G
Sbjct: 266 ELGKQIHCLALRLGFG-GDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 171 Y-----------------------------------MRSGEIEDALQLFDEFPVRNAISW 195
+ RSG++E ++F P + +W
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAW 384
Query: 196 TALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMT 255
A++ G+ +H+++A+ FR+MQ + PD T+ +H +V+
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 256 QDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT-MVSWNSIIVGFAANGLADEAL 314
+ + N + + LI +Y+ C +EI+ +FD ++ + WNS+I GF N L +AL
Sbjct: 445 TE-ISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKAL 503
Query: 315 SFFNSMQKEG-FEPDGVSYTGALTACSH-------------------------------- 341
F M + P+ S+ L++CS
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 342 ---AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKP 395
G ID + F+ + R + + ++ Y GR +EA+ + + M KP
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVI-----WNEMIHGYGHNGRGDEAVGLYRKMISSGEKP 618
Query: 396 NEVVLGSLLAACRTKGEIGLAEKV---MKYLVELDPGGDSNYVLLSNIYAAVGKWDGANK 452
+ + S+L AC G + ++ M+ + ++P D +Y+ + + G+ + A K
Sbjct: 619 DGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELD-HYICIVDCLGRAGRLEDAEK 677
Query: 453 VRRA 456
+ A
Sbjct: 678 LAEA 681
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 155/351 (44%), Gaps = 45/351 (12%)
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
G +H + ++G+ +D + L+D+Y + G+ D AR VFD+M +R++ SWN L
Sbjct: 25 GKVIHGFIVRMGMK-SDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
+ G++ +A ++FD P R+ +SW +I V+K ++AL ++ M G P T+
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI-EIARQVFDGMLH 291
H V + L N+ V N+L+ MYA+CG I + +VF+ +
Sbjct: 144 VLSACSKVLDGVFGMRCHG-VAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 292 RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
VS+ ++I G A EA+ F M ++G + D V + L+ + D I
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEI 262
Query: 352 F-NKM-KRVRRIAPRIEHYG------CLVDLYSRAGRLEEALDVIKNMP----------- 392
+ N++ K++ +A R+ G L+++Y++ + A + MP
Sbjct: 263 YGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 393 -----------------------MKPNEVVLGSLLAACRTKGEIGLAEKVM 420
+PNEV S+L AC G++ ++
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIF 373
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 162/356 (45%), Gaps = 36/356 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W + I+ R G +A + RM P+ TL ++LS C+ FG
Sbjct: 103 VVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDG---VFGMR 159
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGN-VDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
H A K GLD N + VG AL+ MYAK G VD VF+ + N VS+ ++ G R
Sbjct: 160 CHGVAVKTGLDKN-IFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARE 218
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
++ +A+Q+F + + + + ++ + E+ + +
Sbjct: 219 NKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQ-------- 270
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H L + + ++ ++NSL+++YA+ + A +F M +
Sbjct: 271 --------------IHCLAL-RLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
VSWN +IVGF +D+++ F M+ GF+P+ V+ L AC +G ++ G RIF+
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAAC 407
+ + P + + ++ YS EEA+ + M +KP++ L +L++C
Sbjct: 376 IPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 219/432 (50%), Gaps = 19/432 (4%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + I + +L EA RM + VE + +T T+ GC + G +
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC--------LEAGNYI 302
Query: 117 HAYARKLGLDMNDVKVGT-ALIDMYAKSGNVDSARL--VFDQMGLRNLV-------SWNT 166
A +G+ +V++G+ A+I+ ++ + + VF + +R+ N+
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS 362
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
++ Y R ++ A +F + + +W ++I GF + ++ +EM LSG P+
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
++T+ H ++ + S KD + + NSL+DMYA+ G I A++VF
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
D M R V++ S+I G+ G + AL++F M + G +PD V+ L+ACSH+ L+
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
EG +F KM+ V I R+EHY C+VDLY RAG L++A D+ +P +P+ + +LL A
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKA 602
Query: 407 CRTKGEIGLAEKVM-KYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKK 465
C G + E K L+E P +Y+LL+++YA G W V+ + D G++K
Sbjct: 603 CLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKA 662
Query: 466 PGFSSIEIDSSI 477
F+ +E DS +
Sbjct: 663 HEFALMETDSEL 674
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 113/281 (40%), Gaps = 39/281 (13%)
Query: 66 HCRS-GQLVEAASTF--VRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARK 122
HC S GQL EA TF +R + E + +LLS C + + G +HA+
Sbjct: 55 HCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGF---NEFVPGQQLHAHCIS 111
Query: 123 LGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQ 182
GL+ + V V L+ Y+ +D A+ + + + + + WN
Sbjct: 112 SGLEFDSVLV-PKLVTFYSAFNLLDEAQTITENSEILHPLPWNV---------------- 154
Query: 183 LFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXX 242
LIG +++ ++++ ++ M G+ D T
Sbjct: 155 ---------------LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLD 199
Query: 243 XXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIV 302
VH + S + N+ V N+LI MY R G +++AR++FD M R VSWN+II
Sbjct: 200 FAYGRVVHGSIEVS-SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
+ + EA + M G E V++ C AG
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 219/432 (50%), Gaps = 19/432 (4%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + I + +L EA RM + VE + +T T+ GC + G +
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC--------LEAGNYI 302
Query: 117 HAYARKLGLDMNDVKVGT-ALIDMYAKSGNVDSARL--VFDQMGLRNLV-------SWNT 166
A +G+ +V++G+ A+I+ ++ + + VF + +R+ N+
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS 362
Query: 167 MLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
++ Y R ++ A +F + + +W ++I GF + ++ +EM LSG P+
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
++T+ H ++ + S KD + + NSL+DMYA+ G I A++VF
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 287 DGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLID 346
D M R V++ S+I G+ G + AL++F M + G +PD V+ L+ACSH+ L+
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
EG +F KM+ V I R+EHY C+VDLY RAG L++A D+ +P +P+ + +LL A
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKA 602
Query: 407 CRTKGEIGLAEKVM-KYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKK 465
C G + E K L+E P +Y+LL+++YA G W V+ + D G++K
Sbjct: 603 CLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKA 662
Query: 466 PGFSSIEIDSSI 477
F+ +E DS +
Sbjct: 663 HEFALMETDSEL 674
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 113/281 (40%), Gaps = 39/281 (13%)
Query: 66 HCRS-GQLVEAASTF--VRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARK 122
HC S GQL EA TF +R + E + +LLS C + + G +HA+
Sbjct: 55 HCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGF---NEFVPGQQLHAHCIS 111
Query: 123 LGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQ 182
GL+ + V V L+ Y+ +D A+ + + + + + WN
Sbjct: 112 SGLEFDSVLV-PKLVTFYSAFNLLDEAQTITENSEILHPLPWNV---------------- 154
Query: 183 LFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXX 242
LIG +++ ++++ ++ M G+ D T
Sbjct: 155 ---------------LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLD 199
Query: 243 XXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIV 302
VH + S + N+ V N+LI MY R G +++AR++FD M R VSWN+II
Sbjct: 200 FAYGRVVHGSIEVS-SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
+ + EA + M G E V++ C AG
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 218/422 (51%), Gaps = 14/422 (3%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMRE-AEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
V + + I+ +G + S F MR+ + EPN++T + ++ CA S ++ +G
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA---SLLNLQYGR 251
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMG-LRNLVSWNTMLDGYMR 173
+H K + VGTALIDMY+K SA +VF ++ RNL+SWN+++ G M
Sbjct: 252 QLHGLVMKKEFQF-ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMI 310
Query: 174 SGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
+G+ E A++LF++ ++ +W +LI GF + +A + F M + P
Sbjct: 311 NGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKC 370
Query: 230 VXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM 289
+ +H V+ + +D + V SLIDMY +CG AR++FD
Sbjct: 371 LTSLLSACSDIWTLKNGKEIHGHVIKAAAERD-IFVLTSLIDMYMKCGLSSWARRIFDRF 429
Query: 290 LHRTM--VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE 347
+ V WN +I G+ +G + A+ F +++E EP ++T L+ACSH G +++
Sbjct: 430 EPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEK 489
Query: 348 GLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
G +IF M+ P EH GC++DL R+GRL EA +VI M + V SLL +C
Sbjct: 490 GSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS-SLLGSC 548
Query: 408 RTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPG 467
R + L E+ L EL+P + +V+LS+IYAA+ +W+ +R+ + + + K PG
Sbjct: 549 RQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPG 608
Query: 468 FS 469
S
Sbjct: 609 LS 610
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 146/344 (42%), Gaps = 46/344 (13%)
Query: 89 PNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDS 148
PN T LL CA V G +HA K G + DV TAL+ MY
Sbjct: 29 PNKFTFPPLLKSCAKL---GDVVQGRILHAQVVKTGFFV-DVFTATALVSMY-------- 76
Query: 149 ARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHH 208
M+ ++ DAL++ DE P R S A + G ++
Sbjct: 77 -----------------------MKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFC 113
Query: 209 KQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNS 268
+ A F + ++SG + VTV +H L M + + V V S
Sbjct: 114 RDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQ---LHCLAM-KSGFEMEVYVGTS 169
Query: 269 LIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK-EGFEP 327
L+ MY+RCG +A ++F+ + H+++V++N+ I G NG+ + S FN M+K EP
Sbjct: 170 LVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEP 229
Query: 328 DGVSYTGALTACSHAGLIDEGLRIFN-KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALD 386
+ V++ A+TAC+ + G ++ MK+ + + L+D+YS+ + A
Sbjct: 230 NDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT--ALIDMYSKCRCWKSAYI 287
Query: 387 VIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGG 430
V + N + S+++ G+ E ++ +LD G
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQ---HETAVELFEKLDSEG 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 45/210 (21%)
Query: 51 KHTDPTVAWTSSIAHHCRSGQ-----------------------------------LVEA 75
K T ++W S I+ +GQ ++EA
Sbjct: 293 KDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEA 352
Query: 76 ASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTA 135
F RM + P+ L +LLS C+ + + G +H + K + D+ V T+
Sbjct: 353 FKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKN---GKEIHGHVIKAAAE-RDIFVLTS 408
Query: 136 LIDMYAKSGNVDSARLVFDQM--GLRNLVSWNTMLDGYMRSGEIEDALQLFD---EFPVR 190
LIDMY K G AR +FD+ ++ V WN M+ GY + GE E A+++F+ E V
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Query: 191 NAI-SWTALIGGFVKKDHHKQALECFREMQ 219
++ ++TA++ + ++ + FR MQ
Sbjct: 469 PSLATFTAVLSACSHCGNVEKGSQIFRLMQ 498
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 191/357 (53%), Gaps = 7/357 (1%)
Query: 42 QSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREA-EVEPNNITLITLLSG 100
Q SL N + T W I + + EA F+ M + + + + T ++
Sbjct: 69 QYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKA 128
Query: 101 CAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRN 160
C + SS+ G VH A K G NDV L+D+Y K G DS R VFD+M R+
Sbjct: 129 CL---ASSSIRLGTQVHGLAIKAGF-FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRS 184
Query: 161 LVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL 220
+VSW TML G + + +++ A +F++ P+RN +SWTA+I +VK +A + FR MQ+
Sbjct: 185 IVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 221 SGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIE 280
V P+ T+ WVH + D + +LIDMY++CG ++
Sbjct: 245 DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLD-CFLGTALIDMYSKCGSLQ 303
Query: 281 IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTAC 339
AR+VFD M +++ +WNS+I +G +EALS F M++E EPD +++ G L+AC
Sbjct: 304 DARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSAC 363
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPN 396
++ G + +GLR F +M +V I+P EH C++ L +A +E+A +++++M P+
Sbjct: 364 ANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 222/454 (48%), Gaps = 39/454 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V WT I+ R G+ +A F M ++ + ++ + ++++ CA S GA+
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL---GSFDLGAS 367
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH Y + G + D +LI MYAK G+
Sbjct: 368 VHGYVLRHGYTL-DTPALNSLITMYAKCGH------------------------------ 396
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP-DYVTVXXXX 234
++ +L +F+ R+ +SW A+I G+ + +AL F EM+ V D TV
Sbjct: 397 -LDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H +V+ + ++ V +L+DMY++CG +E A++ FD + + +
Sbjct: 456 QACSSAGALPVGKLIHCIVI-RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDV 514
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
VSW +I G+ +G D AL ++ G EP+ V + L++CSH G++ +GL+IF+
Sbjct: 515 VSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSS 574
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M R + P EH C+VDL RA R+E+A K +P+ VLG +L ACR G+
Sbjct: 575 MVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTE 634
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
+ + + + ++EL PG +YV L + +AA+ +WD ++ M+ G++K PG+S IE++
Sbjct: 635 VEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMN 694
Query: 475 SSIYKFVAGDKSHEENGSIYASLELLSFELQLCG 508
F SH ++ + L+LLS E+ G
Sbjct: 695 GKTTTFFMNHTSHSDD--TVSLLKLLSREMMQFG 726
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 183/447 (40%), Gaps = 81/447 (18%)
Query: 54 DPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
+ T + S I H G + STF M ++ P+ T +LL CA S +SFG
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACA---SLQRLSFG 65
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
++H G +D + ++L+++YAK G + AR VF++M R++V W M+ Y R
Sbjct: 66 LSIHQQVLVNGFS-SDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSR 124
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
+G + +A L + EM+ G+ P VT+
Sbjct: 125 AGIVGEACSLVN-------------------------------EMRFQGIKPGPVTLLEM 153
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+H + ++ V NS++++Y +C + A+ +FD M R
Sbjct: 154 LSGVLEITQLQC---LHDFAVIY-GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRD 209
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGAL----TACS-------HA 342
MVSWN++I G+A+ G E L M+ +G PD ++ +L T C H
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 343 GLIDEGLRIFNKMK-----------------RVRRIAPR--IEHYGCLVDLYSRAGRLEE 383
++ G + +K RV P + + ++ R GR E+
Sbjct: 270 QIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEK 329
Query: 384 ALDVIKNMPMKPNEV---VLGSLLAACRTKGEIGLAEKVMKYLVE----LD-PGGDSNYV 435
AL V M +++ + S++A+C G L V Y++ LD P +S
Sbjct: 330 ALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNS--- 386
Query: 436 LLSNIYAAVGKWDGANKVRRAMKDRGI 462
L +YA G D + + M +R +
Sbjct: 387 -LITMYAKCGHLDKSLVIFERMNERDL 412
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 215/442 (48%), Gaps = 39/442 (8%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+WT+ I+ + + +A T+ M + V+P+ IT+ +LS CA + + G +
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA---TLGDLDTGVEL 420
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H A K L ++ V V LI+MY+K +D A
Sbjct: 421 HKLAIKARL-ISYVIVANNLINMYSKCKCIDKA--------------------------- 452
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
L +F P +N ISWT++I G + +AL R+M+++ + P+ +T+
Sbjct: 453 ----LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAA 507
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H V+ D+ + N+L+DMY RCG + A F+ + + S
Sbjct: 508 CARIGALMCGKEIHAHVLRTGVGLDDF-LPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTS 565
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
WN ++ G++ G + F+ M K PD +++ L CS + ++ +GL F+KM+
Sbjct: 566 WNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME 625
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+ P ++HY C+VDL RAG L+EA I+ MP+ P+ V G+LL ACR +I L
Sbjct: 626 DYG-VTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLG 684
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
E +++ ELD Y+LL N+YA GKW KVRR MK+ G+ G S +E+
Sbjct: 685 ELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGK 744
Query: 477 IYKFVAGDKSHEENGSIYASLE 498
++ F++ DK H + I LE
Sbjct: 745 VHAFLSDDKYHPQTKEINTVLE 766
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 156/352 (44%), Gaps = 39/352 (11%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMRE-AEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
+W + + + G EA + RM V+P+ T +L C P ++ G V
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPD---LARGKEV 218
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + + G ++ D+ V ALI MY K G +
Sbjct: 219 HVHVVRYGYEL-DIDVVNALITMYVKCG-------------------------------D 246
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
++ A LFD P R+ ISW A+I G+ + + LE F M+ V PD +T+
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H V+T D + V NSL MY G A ++F M + +VS
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVD-ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W ++I G+ N L D+A+ + M ++ +PD ++ L+AC+ G +D G+ +
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACR 408
+ R I+ I L+++YS+ +++ALD+ N+P K N + S++A R
Sbjct: 426 KARLISYVIVANN-LINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLR 475
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 170/397 (42%), Gaps = 78/397 (19%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
C +G+L EA M+E V + + L+ C + G+ V++ A +
Sbjct: 70 CANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEE---GSKVYSIALS-SMS 125
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDE 186
V++G A + M+ + GN+ A VF +M RNL SWN ++ GY + G ++A+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH- 184
Query: 187 FPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
R + + GV PD T
Sbjct: 185 -----------------------------RMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAA 306
VH V+ + + ++ V N+LI MY +CG ++ AR +FD M R ++SWN++I G+
Sbjct: 216 KEVHVHVV-RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 307 NGLADEALSFFNSMQKEGFEPDGVSYTGALTACS-----------HAGLIDEGL------ 349
NG+ E L F +M+ +PD ++ T ++AC HA +I G
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 350 ------------------RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
++F++M+R I + ++ Y ++A+D + M
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMER-----KDIVSWTTMISGYEYNFLPDKAIDTYRMM 389
Query: 392 ---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE 425
+KP+E+ + ++L+AC T G++ ++ K ++
Sbjct: 390 DQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 147/330 (44%), Gaps = 42/330 (12%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
++W + I+ + +G E F MR V+P+ +TL +++S C G +
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR---LGRDI 319
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HAY G + D+ V +L MY +G+ A +F +M +++VSW TM+ GY
Sbjct: 320 HAYVITTGFAV-DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE---- 374
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
++ P +A++ +R M V PD +TV
Sbjct: 375 -------YNFLP--------------------DKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H+L + + L V V+N+LI+MY++C CI+ A +F + + ++S
Sbjct: 408 CATLGDLDTGVELHKLAI-KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS 466
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W SII G N EAL F M K +P+ ++ T AL AC+ G + G I
Sbjct: 467 WTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIH---A 522
Query: 357 RVRRIAPRIEHY--GCLVDLYSRAGRLEEA 384
V R ++ + L+D+Y R GR+ A
Sbjct: 523 HVLRTGVGLDDFLPNALLDMYVRCGRMNTA 552
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 217/474 (45%), Gaps = 76/474 (16%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
D V+W S I R G + EA S F RM E +++ ++ T+ ++L+ A S + +
Sbjct: 290 VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFA--LSRTEMKI 347
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
++ H K G + V AL+DMYAK
Sbjct: 348 ASSAHCLIVKTGYATYKL-VNNALVDMYAKR----------------------------- 377
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
G ++ AL++F+ ++ ISWTAL+ G + +AL+ F M++ G+ PD +
Sbjct: 378 --GIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTAS 435
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
VH + + ++ V+NSL+ MY +CG +E A +F+ M R
Sbjct: 436 VLSASAELTLLEFGQQVHGNYI-KSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR 494
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+++W +IVG+A N GL+++ R F
Sbjct: 495 DLITWTCLIVGYAKN-----------------------------------GLLEDAQRYF 519
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+ M+ V I P EHY C++DL+ R+G + ++ M ++P+ V ++LAA R G
Sbjct: 520 DSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGN 579
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
I E+ K L+EL+P YV LSN+Y+A G+ D A VRR MK R I K+PG S +E
Sbjct: 580 IENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVE 639
Query: 473 IDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFS------DKETYE 520
++ F++ D+ H IY+ ++ + ++ GY D S DKE E
Sbjct: 640 EKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKE 693
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 10/317 (3%)
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
FG+ +H+YA + L N L+ +KSG VD AR +FD+M R+ +WNTM+ Y
Sbjct: 16 FGSCIHSYADRTKLHSN------LLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAY 69
Query: 172 MRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
S + DA +LF PV+N ISW ALI G+ K +A F EMQ G+ P+ T+
Sbjct: 70 SNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLG 129
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML- 290
+H + + +V V N L+ MYA+C I A +F+ M
Sbjct: 130 SVLRMCTSLVLLLRGEQIHGHTI-KTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ V+W S++ G++ NG A +A+ F +++EG + + ++ LTAC+ G++
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTK 410
+ + + I L+D+Y++ +E A +++ M + + V S++ C +
Sbjct: 249 VHCCIVK-SGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQ 306
Query: 411 GEIGLAEKVMKYLVELD 427
G IG A + + E D
Sbjct: 307 GLIGEALSMFGRMHERD 323
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 213/486 (43%), Gaps = 75/486 (15%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
T++W + I+ +C+SG VEA + F M+ ++PN TL ++L C S + G
Sbjct: 90 TISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCT---SLVLLLRGEQ 146
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM-GLRNLVSWNTMLDGYMRS 174
+H + K G D+ DV V L+ MYA+ + A +F+ M G +N V+W +ML GY ++
Sbjct: 147 IHGHTIKTGFDL-DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
G F + A+ECFR+++ G + T
Sbjct: 206 G-----------FAFK--------------------AIECFRDLRREGNQSNQYTFPSVL 234
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
VH + + K N+ V ++LIDMYA+C +E AR + +GM +
Sbjct: 235 TACASVSACRVGVQVH-CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGAL------------TACSHA 342
VSWNS+IVG GL EALS F M + + D + L + +H
Sbjct: 294 VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHC 353
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGS 402
++ G + + LVD+Y++ G ++ AL V + M K +V+ +
Sbjct: 354 LIVKTGYATYKLVNNA------------LVDMYAKRGIMDSALKVFEGMIEK--DVISWT 399
Query: 403 LLAACRTKGEIGLAEKVMKYLVELDPGGDS-NYVLLSNIYAAVGKWDGANKVRRAMKDRG 461
L T G ++ +K + GG + + ++ +++ +A + + + G
Sbjct: 400 ALVTGNTHN--GSYDEALKLFCNMRVGGITPDKIVTASVLSASAE---LTLLEFGQQVHG 454
Query: 462 IRKKPGF-SSIEIDSSIYKFVAGDKSHEENGSIYASLE---LLSFELQLCGYVPD--FSD 515
K GF SS+ +++S+ S E+ I+ S+E L+++ + GY + D
Sbjct: 455 NYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLED 514
Query: 516 KETYED 521
+ Y D
Sbjct: 515 AQRYFD 520
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 190/444 (42%), Gaps = 62/444 (13%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V WTS + + ++G +A F +R + N T ++L+ CA S S+ G V
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA---SVSACRVGVQV 249
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H K G N + V +ALIDMYAK E
Sbjct: 250 HCCIVKSGFKTN-IYVQSALIDMYAKCR-------------------------------E 277
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+E A L + V + +SW ++I G V++ +AL F M + D T+
Sbjct: 278 MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNC 337
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
++ + V+N+L+DMYA+ G ++ A +VF+GM+ + ++S
Sbjct: 338 FALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVIS 397
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W +++ G NG DEAL F +M+ G PD + L+A + L++ G ++
Sbjct: 398 WTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYI 457
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLA 416
+ + LV +Y++ G LE+A +VI N M+ +++ + L K GL
Sbjct: 458 K-SGFPSSLSVNNSLVTMYTKCGSLEDA-NVIFN-SMEIRDLITWTCLIVGYAKN--GLL 512
Query: 417 EKVMKY------LVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSS 470
E +Y + + PG + +Y + +++ G + ++ M+
Sbjct: 513 EDAQRYFDSMRTVYGITPGPE-HYACMIDLFGRSGDFVKVEQLLHQME------------ 559
Query: 471 IEIDSSIYK-FVAGDKSHE--ENG 491
+E D++++K +A + H ENG
Sbjct: 560 VEPDATVWKAILAASRKHGNIENG 583
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 199/419 (47%), Gaps = 37/419 (8%)
Query: 54 DPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFG 113
D V TS ++ + G + A F + R+ ++ + + L+ +L GC S + G
Sbjct: 310 DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGC---KKSSHIDIG 366
Query: 114 ATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMR 173
++H YA K GL + V LI MY+K FD
Sbjct: 367 MSLHGYAIKSGLCTKTLVV-NGLITMYSK----------FD------------------- 396
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-VAPDYVTVXX 232
++E L LF++ ISW ++I G V+ A E F +M L+G + PD +T+
Sbjct: 397 --DVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIAS 454
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+H + + +N V +LIDMYA+CG A VF +
Sbjct: 455 LLAGCSQLCCLNLGKELHGYTLRNNFENENF-VCTALIDMYAKCGNEVQAESVFKSIKAP 513
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+WNS+I G++ +GL ALS + M+++G +PD +++ G L+AC+H G +DEG F
Sbjct: 514 CTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICF 573
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
M + I+P ++HY +V L RA EAL +I M +KP+ V G+LL+AC E
Sbjct: 574 RAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRE 633
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+ + E V + + LD YVL+SN+YA WD +VR MKD G G S I
Sbjct: 634 LEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 184/440 (41%), Gaps = 81/440 (18%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
TV W + I + R+G +A F+ M + P+ TL+ LL C VS G +
Sbjct: 116 TVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQ---CGFVSQGRS 172
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH A K GL++ D +V ALI Y+K + SA ++F +M ++ VSWNTM+ Y +SG
Sbjct: 173 VHGVAAKSGLEL-DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 231
Query: 176 EIEDALQLFDEFPVRNA-ISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
E+A+ +F +N IS +I H + L C
Sbjct: 232 LQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH-EPLHC-------------------- 270
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
++ + + +++ V SL+ Y+RCGC+ A +++ ++
Sbjct: 271 ------------------LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSI 312
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI--- 351
V SI+ +A G D A+ +F+ ++ + D V+ G L C + ID G+ +
Sbjct: 313 VGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGY 372
Query: 352 -------------------FNKMKRVRRIAPRIEH--------YGCLVDLYSRAGRLEEA 384
++K V + E + ++ ++GR A
Sbjct: 373 AIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTA 432
Query: 385 LDVIKNMPMK----PNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL--LS 438
+V M + P+ + + SLLA C + L +++ Y + + + N+V L
Sbjct: 433 FEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLR-NNFENENFVCTALI 491
Query: 439 NIYAAVGKWDGANKVRRAMK 458
++YA G A V +++K
Sbjct: 492 DMYAKCGNEVQAESVFKSIK 511
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 171/425 (40%), Gaps = 64/425 (15%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVR-MREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
+++ S+ C G++ + T R + + + PN+ T+ S+ AT
Sbjct: 13 LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTM--------------SIFLQAT 58
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
++ N K+ + + +D R V+ + L NL Y++ G
Sbjct: 59 TTSF--------NSFKLQVEQVQTHLTKSGLD--RFVYVKTSLLNL---------YLKKG 99
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+ A LFDE P R+ + W ALI G+ + + A + F M G +P T+
Sbjct: 100 CVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLP 159
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH V + L+ + +V N+LI Y++C + A +F M ++ V
Sbjct: 160 FCGQCGFVSQGRSVHG-VAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTV 218
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTA-CSHAGL--IDEGLRIF 352
SWN++I ++ +GL +EA++ F +M ++ E V+ L+A SH L + +
Sbjct: 219 SWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMV 278
Query: 353 NKMKRVRRIAPRIEHYGCL---------------------VDLYSRAGRLEEAL---DVI 388
N + V + GCL V Y+ G ++ A+
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 389 KNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWD 448
+ + MK + V L +L C+ I + + Y ++ G + ++++ + K+D
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIK--SGLCTKTLVVNGLITMYSKFD 396
Query: 449 GANKV 453
V
Sbjct: 397 DVETV 401
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 209/427 (48%), Gaps = 36/427 (8%)
Query: 74 EAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVG 133
EA F+ M+ +EP+ T +L C+ + ++ +G +HA K +D +G
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACS---AAKTLEYGRQIHALICKNNFQ-SDEFIG 396
Query: 134 TALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAI 193
+ALI++YA G+ ED +Q F ++
Sbjct: 397 SALIELYALMGST-------------------------------EDGMQCFASTSKQDIA 425
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
SWT++I V+ + + A + FR++ S + P+ TV +
Sbjct: 426 SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYA 485
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+ + + V S I MYA+ G + +A QVF + + + +++++I A +G A+EA
Sbjct: 486 I-KSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVD 373
L+ F SM+ G +P+ ++ G L AC H GL+ +GL+ F MK RI P +H+ CLVD
Sbjct: 545 LNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 374 LYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSN 433
L R GRL +A ++I + + + V +LL++CR + + ++V + L+EL+P +
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGS 664
Query: 434 YVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSI 493
YVLL NIY G A +VR M+DRG++K+P S I I + + F D SH + I
Sbjct: 665 YVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMI 724
Query: 494 YASLELL 500
Y LE +
Sbjct: 725 YTMLETM 731
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 195/486 (40%), Gaps = 78/486 (16%)
Query: 41 NQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG 100
+Q+ SL D V+W S I+ + R G E + +M + L ++L
Sbjct: 200 DQAMSLFDRCDERDQ-VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKA 258
Query: 101 CAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRN 160
C + + G +H Y KLG++ D+ V TAL+DMYAK+G++ A +F M +N
Sbjct: 259 CCINLNEGFIEKGMAIHCYTAKLGMEF-DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKN 317
Query: 161 LVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQL 220
+V++N M+ G+++ EI D + +A + F +MQ
Sbjct: 318 VVTYNAMISGFLQMDEITD--------------------------EASSEAFKLFMDMQR 351
Query: 221 SGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIE 280
G+ P T +H L+ +++ + + + ++LI++YA G E
Sbjct: 352 RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI-CKNNFQSDEFIGSALIELYALMGSTE 410
Query: 281 IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
Q F + + SW S+I N + A F + P+ + + ++AC+
Sbjct: 411 DGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Query: 341 -HAGL----------IDEGLRIFNKMKR-------------------VRRIAPRIEHYGC 370
A L I G+ F +K + P + Y
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 371 LVDLYSRAGRLEEALDVIKNMP---MKPN-EVVLGSLLAACRTKGEIGLAEKVMKYL--- 423
++ ++ G EAL++ ++M +KPN + LG L+A C GL + +KY
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG----GLVTQGLKYFQCM 586
Query: 424 ---VELDPGGDSNYVLLSNIYAAVGKWDGANK--VRRAMKDRGIRKKPGFSSIEI--DSS 476
++P + ++ L ++ G+ A + +D + + SS + DS
Sbjct: 587 KNDYRINP-NEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSV 645
Query: 477 IYKFVA 482
I K VA
Sbjct: 646 IGKRVA 651
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 12/249 (4%)
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
Y + E+ A QLFD P RN IS+ +LI G+ + ++QA+E F E + + + D T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H LV+ + L V + N LIDMY++CG ++ A +FD
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVV-NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS---HAGLIDE 347
R VSWNS+I G+ G A+E L+ M ++G + L AC + G I++
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 348 GLRIF---NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
G+ I K+ I R L+D+Y++ G L+EA+ + MP K N V +++
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRT----ALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMI 325
Query: 405 AACRTKGEI 413
+ EI
Sbjct: 326 SGFLQMDEI 334
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 272 MYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVS 331
MY +C + ARQ+FD M R ++S+NS+I G+ G ++A+ F ++ + D +
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 332 YTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
Y GAL C +D G + + + V ++ ++ L+D+YS+ G+L++A+ +
Sbjct: 151 YAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 392 PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGG 430
+ ++V SL++ +G AE+ + L ++ G
Sbjct: 210 DER-DQVSWNSLISG---YVRVGAAEEPLNLLAKMHRDG 244
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 202/414 (48%), Gaps = 37/414 (8%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
W S ++ + + A +++ ++++ ++ TL L C +Y + + G VH
Sbjct: 309 VWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN---LRLGLQVH 365
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
+ G ++ D VG+ L+D++A GN I
Sbjct: 366 SLVVVSGYEL-DYIVGSILVDLHANVGN-------------------------------I 393
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
+DA +LF P ++ I+++ LI G VK + A FRE+ G+ D V
Sbjct: 394 QDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVC 453
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H L + + + V + +L+DMY +CG I+ +FDGML R +VSW
Sbjct: 454 SSLASLGWGKQIHGLCIKKGYESEPV-TATALVDMYVKCGEIDNGVVLFDGMLERDVVSW 512
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
IIVGF NG +EA +F+ M G EP+ V++ G L+AC H+GL++E MK
Sbjct: 513 TGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKS 572
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
+ P +EHY C+VDL +AG +EA ++I MP++P++ + SLL AC T GL
Sbjct: 573 EYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVT 632
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSI 471
+ + L++ P S Y LSN YA +G WD +KVR A K G K+ G S I
Sbjct: 633 VIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 180/392 (45%), Gaps = 22/392 (5%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEP-NNITLITLLSGCAHYPSPSSVSFGAT 115
V WT+ ++ + G+ +A + RM ++E E N +L C + G
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV---GDIQLGIL 128
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
V+ K L DV + +++DMY K+G + A F ++ + SWNT++ GY ++G
Sbjct: 129 VYERIGKENLR-GDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+++A+ LF P N +SW LI GFV K + ALE MQ G+ D +
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLK 246
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG---MLHR 292
+H V+ + L+ + ++LIDMY+ CG + A VF ++
Sbjct: 247 ACSFGGLLTMGKQLHCCVV-KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
++ WNS++ GF N + AL + + D + +GAL C + + GL++
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 353 NKM----KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACR 408
+ + + I I LVDL++ G +++A + +P K + + L+ C
Sbjct: 366 SLVVVSGYELDYIVGSI-----LVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCV 419
Query: 409 TKGEIGLAEKVMKYLVELDPGGDSNYVLLSNI 440
G LA + + L++L G D++ ++SNI
Sbjct: 420 KSGFNSLAFYLFRELIKL--GLDADQFIVSNI 449
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 130/310 (41%), Gaps = 21/310 (6%)
Query: 99 SGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL 158
+G H + G ++ A+ K G+ N V + +I MY + A VFD+M
Sbjct: 10 AGLRHCGKVQAFKRGESIQAHVIKQGISQN-VFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 159 RNLVSWNTMLDGYMRSGEIEDALQLF-----DEFPVRNAISWTALIGGFVKKDHHKQALE 213
RN+V+W TM+ GY G+ A++L+ E N ++A++ + +
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 214 CFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVS----NSL 269
+ + + D V + RL+ S K+ +R S N+L
Sbjct: 129 VYERIGKENLRGDVVLMNSVVDMYVKNG---------RLIEANSSFKEILRPSSTSWNTL 179
Query: 270 IDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDG 329
I Y + G ++ A +F M +VSWN +I GF G + AL F MQ+EG DG
Sbjct: 180 ISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDG 238
Query: 330 VSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIK 389
+ L ACS GL+ G ++ + + + L+D+YS G L A DV
Sbjct: 239 FALPCGLKACSFGGLLTMGKQLHCCVVK-SGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 390 NMPMKPNEVV 399
+ N V
Sbjct: 298 QEKLAVNSSV 307
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/480 (22%), Positives = 190/480 (39%), Gaps = 124/480 (25%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF--- 112
+ +W + I+ +C++G + EA + F RM +PN ++ L+SG SP ++ F
Sbjct: 173 STSWNTLISGYCKAGLMDEAVTLFHRMP----QPNVVSWNCLISGFVDKGSPRALEFLVR 228
Query: 113 ----------------------------GATVHAYARKLGLDMNDVKVGTALIDMYAKSG 144
G +H K GL+ + + +ALIDMY+ G
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI-SALIDMYSNCG 287
Query: 145 NVDSARLVFDQMGL---RNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGG 201
++ A VF Q L ++ WN+ML G++ + E E AL L +
Sbjct: 288 SLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQI-------------- 333
Query: 202 FVKKDHHKQALECFREMQLSG---VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDS 258
Q+ CF LSG + +YV + VH LV+
Sbjct: 334 -------YQSDLCFDSYTLSGALKICINYVNLRLGLQ-------------VHSLVVVSGY 373
Query: 259 LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFN 318
D + V + L+D++A G I+ A ++F + ++ +++++ +I G +G A F
Sbjct: 374 ELDYI-VGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFR 432
Query: 319 SMQKEGFEPDGVSYTGALTACS-----------------------------------HAG 343
+ K G + D + L CS G
Sbjct: 433 ELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCG 492
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIK---NMPMKPNEVVL 400
ID G+ +F+ M + + + ++ + + GR+EEA N+ ++PN+V
Sbjct: 493 EIDNGVVLFDGM-----LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Query: 401 GSLLAACRTKGEIGLAE---KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
LL+ACR G + A + MK L+P + Y ++ ++ G + AN++ M
Sbjct: 548 LGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVV-DLLGQAGLFQEANELINKM 606
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+ + + NV ++N++I MY + A +VFD M R +V+W +++ G+ ++G ++A
Sbjct: 31 VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKA 90
Query: 314 LSFFNSM-QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
+ + M E + Y+ L AC G I G+ ++ ++ + + + +V
Sbjct: 91 IELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGK-ENLRGDVVLMNSVV 149
Query: 373 DLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
D+Y + GRL EA K + ++P+ +L++
Sbjct: 150 DMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISG 182
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 39 NTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLL 98
N + L H + D +A++ I +SG A F + + ++ + + +L
Sbjct: 392 NIQDAHKLFHRLPNKD-IIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNIL 450
Query: 99 SGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL 158
C+ S +S+ +G +H K G + V TAL+DMY K G +D+ ++FD M
Sbjct: 451 KVCS---SLASLGWGKQIHGLCIKKGYESEPV-TATALVDMYVKCGEIDNGVVLFDGMLE 506
Query: 159 RNLVSWNTMLDGYMRSGEIEDALQLF 184
R++VSW ++ G+ ++G +E+A + F
Sbjct: 507 RDVVSWTGIIVGFGQNGRVEEAFRYF 532
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 200/415 (48%), Gaps = 45/415 (10%)
Query: 50 TKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSS 109
+K AW S I+ + GQ +A + + +M E V+P+ T +L C S
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACG---GIGS 210
Query: 110 VSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLD 169
V G +H K G DV V AL+ MYAK G++ AR
Sbjct: 211 VQIGEAIHRDLVKEGFGY-DVYVLNALVVMYAKCGDIVKAR------------------- 250
Query: 170 GYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
+FD P ++ +SW +++ G++ +AL+ FR M +G+ PD V
Sbjct: 251 ------------NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVA 298
Query: 230 VXXXXXXXXXXXXXXXXX-WVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
+ WV R M + + V+N+LI +Y++ G + A +FD
Sbjct: 299 ISSVLARVLSFKHGRQLHGWVIRRGMEWE-----LSVANALIVLYSKRGQLGQACFIFDQ 353
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
ML R VSWN+II + N L +F M + +PDG+++ L+ C++ G++++G
Sbjct: 354 MLERDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDG 410
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALD-VIKNMPMKPNEVVLGSLLAAC 407
R+F+ M + I P++EHY C+V+LY RAG +EEA +++ M ++ V G+LL AC
Sbjct: 411 ERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYAC 470
Query: 408 RTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
G + E + L EL+P + N+ LL IY+ + + +VR+ M DRG+
Sbjct: 471 YLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 163/405 (40%), Gaps = 75/405 (18%)
Query: 96 TLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQ 155
+LL C S ++ G VH L N++ + + L+ +YA G + A VFD+
Sbjct: 97 SLLETCY---SLRAIDHGVRVHHLIPPYLLR-NNLGISSKLVRLYASCGYAEVAHEVFDR 152
Query: 156 MGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECF 215
M R D P +W +LI G+ + ++ A+ +
Sbjct: 153 MSKR-------------------------DSSP----FAWNSLISGYAELGQYEDAMALY 183
Query: 216 REMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYAR 275
+M GV PD T +HR + ++ +V V N+L+ MYA+
Sbjct: 184 FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHR-DLVKEGFGYDVYVLNALVVMYAK 242
Query: 276 CGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
CG I AR VFD + H+ VSWNS++ G+ +GL EAL F M + G EPD V+ +
Sbjct: 243 CGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSV 302
Query: 336 LTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---- 391
L G ++ + R R + + L+ LYS+ G+L +A + M
Sbjct: 303 LARVLS---FKHGRQLHGWVIR-RGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERD 358
Query: 392 ---------------------------PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLV 424
KP+ + S+L+ C G + E++ +
Sbjct: 359 TVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMS 418
Query: 425 E---LDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKP 466
+ +DP + +Y + N+Y G + A + +++ G+ P
Sbjct: 419 KEYGIDPKME-HYACMVNLYGRAGMMEEAYSM--IVQEMGLEAGP 460
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 205/404 (50%), Gaps = 46/404 (11%)
Query: 75 AASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGT 134
A F MR++EV N TL++ LS + +S + H K+GLD+ D+ + T
Sbjct: 211 ALDLFRIMRKSEVVVNVSTLLSFLSAISDL---GDLSGAESAHVLCIKIGLDL-DLHLIT 266
Query: 135 ALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAIS 194
ALI MY K+G + SAR ++FD ++ ++
Sbjct: 267 ALIGMYGKTGGISSAR-------------------------------RIFDCAIRKDVVT 295
Query: 195 WTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVM 254
W +I + K ++ + R+M+ + P+ T V L +
Sbjct: 296 WNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADL-L 354
Query: 255 TQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEAL 314
++ + + + +L+DMYA+ G +E A ++F+ M + + SW ++I G+ A+GLA EA+
Sbjct: 355 EEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAV 414
Query: 315 SFFNSMQKEG--FEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
+ FN M++E P+ +++ L ACSH GL+ EG+R F +M P++EHYGC+V
Sbjct: 415 TLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVV 474
Query: 373 DLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS 432
DL RAG+LEEA ++I+N+P+ + +LLAACR G L E VM L E+ +
Sbjct: 475 DLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPA 534
Query: 433 NYVLLSNIYAAVGKWDGA--NKVRRAMKDRGIRKKPGFSSIEID 474
+ +LL+ +A G + + N++ + RK+ G+S+IEI+
Sbjct: 535 DAILLAGTHAVAGNPEKSLDNELNKG------RKEAGYSAIEIE 572
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 38/321 (11%)
Query: 75 AASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGT 134
A S F ++R + + + IT L C+ VS G +H A + G
Sbjct: 109 AFSVFNQLRAKGLTLDRFSFITTLKSCSR---ELCVSIGEGLHGIALRSGF--------- 156
Query: 135 ALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR-NAI 193
+VF + N ++ Y G+I DA ++FDE P +A+
Sbjct: 157 ----------------MVFTDL-------RNALIHFYCVCGKISDARKVFDEMPQSVDAV 193
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
+++ L+ G+++ AL+ FR M+ S V + T+ H L
Sbjct: 194 TFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLC 253
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+ + L ++ + +LI MY + G I AR++FD + + +V+WN +I +A GL +E
Sbjct: 254 I-KIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEEC 312
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVD 373
+ M+ E +P+ ++ G L++C+++ G R + RIA LVD
Sbjct: 313 VWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVG-RTVADLLEEERIALDAILGTALVD 371
Query: 374 LYSRAGRLEEALDVIKNMPMK 394
+Y++ G LE+A+++ M K
Sbjct: 372 MYAKVGLLEKAVEIFNRMKDK 392
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF-GA 114
V W I + ++G L E +M+ +++PN+ T + LLS CA+ S +F G
Sbjct: 293 VVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAY----SEAAFVGR 348
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
TV + + + D +GTAL+DMYAK G ++ A +F++M +++ SW M+ GY
Sbjct: 349 TVADLLEEERIAL-DAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAH 407
Query: 175 GEIEDALQLFDEF-----PVR-NAISWTALIGGFVKKDHHKQALECFREM 218
G +A+ LF++ VR N I++ ++ + + CF+ M
Sbjct: 408 GLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRM 457
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 206/424 (48%), Gaps = 56/424 (13%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V W + I+ + ++ A S + RM V+P+ T +LL+
Sbjct: 355 VTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLAT---------------- 398
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
LD++ +++ A I + S ++ + N ++ Y ++G+
Sbjct: 399 -------SLDLDVLEMVQACIIKFGLSSKIEIS---------------NALISAYSKNGQ 436
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALE---CFREMQLSGVAPDYVTVXXX 233
IE A LF+ +N ISW A+I GF + LE C E ++ + PD T+
Sbjct: 437 IEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR-ILPDAYTLSTL 495
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
H V+ K+ + + N+LI+MY++CG I+ + +VF+ M +
Sbjct: 496 LSICVSTSSLMLGSQTHAYVLRHGQFKETL-IGNALINMYSQCGTIQNSLEVFNQMSEKD 554
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLIDEGLRIF 352
+VSWNS+I ++ +G + A++ + +MQ EG PD +++ L+ACSHAGL++EGL IF
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIF 614
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGS-------LLA 405
N M + ++H+ CLVDL RAG L+EA ++ K +E +GS L +
Sbjct: 615 NSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV-----KISEKTIGSRVDVWWALFS 669
Query: 406 ACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKK 465
AC G++ L + V K L+E + S YV LSNIYA G W A + RRA+ G K+
Sbjct: 670 ACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQ 729
Query: 466 PGFS 469
G S
Sbjct: 730 RGCS 733
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 177/391 (45%), Gaps = 53/391 (13%)
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGY 171
FG VH YA + GL + V L+ +Y + GN+ S + FD++ ++ SW T+L
Sbjct: 75 FGGQVHCYAIRSGL-LCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSAS 133
Query: 172 MRSGEIEDALQLFDEFPVRNAIS-WTALIGGFVKKDHHKQALECFREMQLSGVAPD---Y 227
+ G+IE A ++FD+ P R+ ++ W A+I G + +H+ ++E FREM GV D +
Sbjct: 134 FKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGF 193
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
T+ VH LV+ + V N+LI MY C + A VF+
Sbjct: 194 ATILSMCDYGSLDFGKQ----VHSLVIKAGFFIAS-SVVNALITMYFNCQVVVDACLVFE 248
Query: 288 --GMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
+ R V++N +I G A DE+L F M + P +++ + +CS A +
Sbjct: 249 ETDVAVRDQVTFNVVIDGLAGFK-RDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMG 307
Query: 346 DE--GLRI--------------------FNKMKRVRRIAPRIEH-----YGCLVDLYSRA 378
+ GL I F ++ +E + ++ Y++A
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQA 367
Query: 379 GRLEEALDVIKNMPM---KPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV 435
+ A+ V K M + KP+E GSLLA T ++ + E V +++ G S+ +
Sbjct: 368 KLGKSAMSVYKRMHIIGVKPDEFTFGSLLA---TSLDLDVLEMVQACIIKF---GLSSKI 421
Query: 436 LLSNIYAAVGKWDGANKVRRA--MKDRGIRK 464
+SN A + + ++ +A + +R +RK
Sbjct: 422 EISN--ALISAYSKNGQIEKADLLFERSLRK 450
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 149/394 (37%), Gaps = 88/394 (22%)
Query: 74 EAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVG 133
E+ F +M EA + P ++T ++++ C S + G VH A K G + + V
Sbjct: 274 ESLLVFRKMLEASLRPTDLTFVSVMGSC------SCAAMGHQVHGLAIKTGYEKYTL-VS 326
Query: 134 TALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAI 193
A + MY+ + +A VF+ + ++LV+
Sbjct: 327 NATMTMYSSFEDFGAAHKVFESLEEKDLVT------------------------------ 356
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
W +I + + K A+ ++ M + GV PD T +
Sbjct: 357 -WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMV----QAC 411
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
+ + L + +SN+LI Y++ G IE A +F+ L + ++SWN+II GF NG E
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 314 LSFFNSMQKEGFE--PDGVSYTGALTAC-------------------------------- 339
L F+ + + PD + + L+ C
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 340 ---SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM----P 392
S G I L +FN+M + + L+ YSR G E A++ K M
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSE-----KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGK 586
Query: 393 MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
+ P+ ++L+AC G + ++ +VE
Sbjct: 587 VIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEF 620
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 195/416 (46%), Gaps = 44/416 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRM--REAEVEPNNITLITLLSGCAHYPSPSSVSFGA 114
V W + ++ + +G + EA M + + T +LLS C + G
Sbjct: 209 VLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC-------RIEQGK 261
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+HA K+ D+ V TAL++MYAKS +
Sbjct: 262 QIHAILFKVSYQF-DIPVATALLNMYAKSNH----------------------------- 291
Query: 175 GEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
+ DA + F+ VRN +SW A+I GF + ++A+ F +M L + PD +T
Sbjct: 292 --LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVL 349
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
V +V + S D + V+NSLI Y+R G + A F + +
Sbjct: 350 SSCAKFSAIWEIKQVQAMVTKKGS-ADFLSVANSLISSYSRNGNLSEALLCFHSIREPDL 408
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
VSW S+I A++G A+E+L F SM ++ +PD +++ L+ACSH GL+ EGLR F +
Sbjct: 409 VSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKR 467
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M +I EHY CL+DL RAG ++EA DV+ +MP +P+ L + C +
Sbjct: 468 MTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRE 527
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVR-RAMKDRGIRKKPGFS 469
+ K L+E++P NY +LSN Y + G W+ A +R R ++ K PG S
Sbjct: 528 SMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 177/412 (42%), Gaps = 74/412 (17%)
Query: 81 RMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMY 140
R+ +V ++++ + L+ C +++ G +H K GL+ + T+L+ Y
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCT---DSTNMKAGIQLHCLMVKQGLE-SSCFPSTSLVHFY 187
Query: 141 AKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIG 200
K G + AR VF+ + R+LV WN ++ Y+ +G I++A L L+G
Sbjct: 188 GKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK------------LMG 235
Query: 201 GFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLK 260
D ++ FR DY T +H ++ + S +
Sbjct: 236 S----DKNR-----FR--------GDYFTFSSLLSACRIEQGKQ----IHA-ILFKVSYQ 273
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM 320
++ V+ +L++MYA+ + AR+ F+ M+ R +VSWN++IVGFA NG EA+ F M
Sbjct: 274 FDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQM 333
Query: 321 QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
E +PD +++ L++C+ I E ++ M + A + L+ YSR G
Sbjct: 334 LLENLQPDELTFASVLSSCAKFSAIWE-IKQVQAMVTKKGSADFLSVANSLISSYSRNGN 392
Query: 381 L-------------------------------EEALDVIKNM--PMKPNEVVLGSLLAAC 407
L EE+L + ++M ++P+++ +L+AC
Sbjct: 393 LSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSAC 452
Query: 408 RTKGEIGLAEKVMKYLVELDP--GGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
G + + K + E D +Y L ++ G D A+ V +M
Sbjct: 453 SHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 127/255 (49%), Gaps = 14/255 (5%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKD---HHKQALE-CF-REMQ 219
N +L Y + E +DA +LFDE P+RN ++W LI G +++D +H+ L C+ +
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
+ V+ D+V+ +H L M + L+ + S SL+ Y +CG I
Sbjct: 135 FTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCL-MVKQGLESSCFPSTSLVHFYGKCGLI 193
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM--QKEGFEPDGVSYTGALT 337
AR+VF+ +L R +V WN+++ + NG+ DEA M K F D +++ L+
Sbjct: 194 VEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLS 253
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNE 397
AC I++G +I + +V I L+++Y+++ L +A + ++M ++ N
Sbjct: 254 ACR----IEQGKQIHAILFKV-SYQFDIPVATALLNMYAKSNHLSDARECFESMVVR-NV 307
Query: 398 VVLGSLLAACRTKGE 412
V +++ GE
Sbjct: 308 VSWNAMIVGFAQNGE 322
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 208/418 (49%), Gaps = 38/418 (9%)
Query: 54 DPTVA-WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
DP +A W I + G + + F M+ +PN T++ L SG PS +
Sbjct: 169 DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSG---LIDPSLLLV 225
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM 172
+VHA+ K+ LD + VG AL++MY++ + SA VF+ + +LV+
Sbjct: 226 AWSVHAFCLKINLDSHSY-VGCALVNMYSRCMCIASACSVFNSISEPDLVAC-------- 276
Query: 173 RSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
++LI G+ + +HK+AL F E+++SG PD V V
Sbjct: 277 -----------------------SSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI 313
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
VH V+ + L+ +++V ++LIDMY++CG ++ A +F G+ +
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVI-RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEK 372
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+VS+NS+I+G +G A A F + + G PD ++++ L C H+GL+++G IF
Sbjct: 373 NIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIF 432
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+MK I P+ EHY +V L AG+LEEA + + ++ + +LG+LL+ C
Sbjct: 433 ERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHEN 492
Query: 413 IGLAEKVMKYLVELDPGGDSNY-VLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
LAE V + + + S Y V+LSN+YA G+WD ++R + + K PG S
Sbjct: 493 THLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 171/444 (38%), Gaps = 78/444 (17%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHA 118
W S I + ++ Q S F ++ ++ P+N T L G + + +H
Sbjct: 74 WNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLR---CIHG 130
Query: 119 YARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIE 178
A GL + + G+A++ Y+K+G I
Sbjct: 131 IAIVSGLGFDQI-CGSAIVKAYSKAG-------------------------------LIV 158
Query: 179 DALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
+A +LF P + W +I G+ + + F MQ G P+ T+
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI 218
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWN 298
VH + + +L + V +L++MY+RC CI A VF+ + +V+ +
Sbjct: 219 DPSLLLVAWSVHAFCL-KINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACS 277
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRV 358
S+I G++ G EAL F ++ G +PD V L +C+ G + + + R+
Sbjct: 278 SLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRL 337
Query: 359 RRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK------------------------ 394
+ I+ L+D+YS+ G L+ A+ + +P K
Sbjct: 338 -GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEK 396
Query: 395 ----------PNEVVLGSLLAACRTKGEIGLAEKV---MKYLVELDPGGDSNYVLLSNIY 441
P+E+ +LL C G + +++ MK ++P + +YV + +
Sbjct: 397 FTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTE-HYVYMVKLM 455
Query: 442 AAVGKWDGANKVRRAMK---DRGI 462
GK + A + +++ D GI
Sbjct: 456 GMAGKLEEAFEFVMSLQKPIDSGI 479
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 116/294 (39%), Gaps = 44/294 (14%)
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTV 230
Y + ++ A +LFD FP R+ W ++I + K L F ++ S PD T
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY 109
Query: 231 XXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML 290
+H + + D + ++++ Y++ G I A ++F +
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI-CGSAIVKAYSKAGLIVEASKLFCSIP 168
Query: 291 HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE--- 347
+ WN +I+G+ G D+ ++ FN MQ G +P+ + ALT +GLID
Sbjct: 169 DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMV-ALT----SGLIDPSLL 223
Query: 348 ---------------------GLRIFNKMKRVRRIA-----------PRIEHYGCLVDLY 375
G + N R IA P + L+ Y
Sbjct: 224 LVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGY 283
Query: 376 SRAGRLEEALDVIKNMPM---KPNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
SR G +EAL + + M KP+ V++ +L +C + ++V Y++ L
Sbjct: 284 SRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRL 337
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 218/471 (46%), Gaps = 47/471 (9%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
++ S I+ G VEA F M E + T +L A S+ G +H
Sbjct: 191 SYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASA---GLGSIYVGKQLH 247
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
A KLG+ +++ V LIDMY+K G+ I
Sbjct: 248 VCALKLGV-VDNTFVSCGLIDMYSKCGD-------------------------------I 275
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
EDA F+ P + ++W +I G+ + ++AL +M+ SGV+ D T+
Sbjct: 276 EDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIS 335
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
H + ++ + + + +L+D Y++ G ++ AR VFD + + ++SW
Sbjct: 336 TKLAKLELTKQAHA-SLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISW 394
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N+++ G+A +G +A+ F M P+ V++ L+AC+++GL ++G IF M
Sbjct: 395 NALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSE 454
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
V I PR HY C+++L R G L+EA+ I+ P+K + +LL ACR + + L
Sbjct: 455 VHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGR 514
Query: 418 KVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSI 477
V + L + P NYV++ N+Y ++GK A V ++ +G+ P + +E+
Sbjct: 515 VVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQT 574
Query: 478 YKFVAGDKSHEENGS----IYASLELLSFELQLCGY-------VPDFSDKE 517
+ F++GD+ N + IY ++ L E+ GY +PD +KE
Sbjct: 575 HSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKE 625
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 111/243 (45%), Gaps = 28/243 (11%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM--QLSG 222
N +L +++ G I DA +LFDE P RN S+ ++I GFV ++ +A E F+ M +LS
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 223 VAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIA 282
V V L + + DN VS LIDMY++CG IE A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKL---GVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYT--------- 333
R F+ M +T V+WN++I G+A +G ++EAL M+ G D + +
Sbjct: 279 RCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKL 338
Query: 334 --GALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
LT +HA LI G I LVD YS+ GR++ A V +
Sbjct: 339 AKLELTKQAHASLIRNGFE------------SEIVANTALVDFYSKWGRVDTARYVFDKL 386
Query: 392 PMK 394
P K
Sbjct: 387 PRK 389
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
TVAW + IA + G EA MR++ V + TL ++ + +
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKL---AKLELTKQ 346
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
HA + G + +++ TAL+D Y+K G VD+AR VFD++ +N++SWN ++ GY G
Sbjct: 347 AHASLIRNGFE-SEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Query: 176 EIEDALQLFDEFPVRNA----ISWTALIGGFVKKDHHKQALECFREM-QLSGVAP 225
DA++LF++ N +++ A++ +Q E F M ++ G+ P
Sbjct: 406 RGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEA 313
M + + + N ++ M+ +CG I AR++FD + R + S+ SII GF G EA
Sbjct: 149 MMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEA 208
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVD 373
F M +E + + ++ L A + G I G ++ ++ + G L+D
Sbjct: 209 FELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCG-LID 267
Query: 374 LYSRAGRLEEALDVIKNMPMKP----NEVVLGSLL 404
+YS+ G +E+A + MP K N V+ G L
Sbjct: 268 MYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 210/446 (47%), Gaps = 45/446 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAE-VEPNNITLITLLSGCAHYPSPSSVSFGA 114
V+WTS I+ + G+ A S F +M E V PN T ++ C+ + + G
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACS---ALAESRIGK 151
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRS 174
+HA GL RN+V ++++D Y +
Sbjct: 152 NIHARLEISGLR--------------------------------RNIVVSSSLVDMYGKC 179
Query: 175 GEIEDALQLFDEFPV--RNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
++E A ++FD RN +SWT++I + + +A+E FR + + D
Sbjct: 180 NDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFN-AALTSDRANQFM 238
Query: 233 XXXXXXXXXXXXXXXW---VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM 289
W H LV T+ + N V+ SL+DMYA+CG + A ++F +
Sbjct: 239 LASVISACSSLGRLQWGKVAHGLV-TRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI 297
Query: 290 LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGL 349
+++S+ S+I+ A +GL + A+ F+ M P+ V+ G L ACSH+GL++EGL
Sbjct: 298 RCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGL 357
Query: 350 RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVL--GSLLAAC 407
+ M + P HY C+VD+ R GR++EA ++ K + + + L G+LL+A
Sbjct: 358 EYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAG 417
Query: 408 RTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPG 467
R G + + + K L++ + S Y+ LSN YA G W+ + +R MK G K+
Sbjct: 418 RLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERA 477
Query: 468 FSSIEIDSSIYKFVAGDKSHEENGSI 493
S IE S+Y F AGD S +E+G I
Sbjct: 478 CSWIENKDSVYVFHAGDLSCDESGEI 503
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 14/286 (4%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-V 223
N ++ Y++ EI A +LFDE N +SWT++I G+ + AL F++M V
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPV 127
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVH-RLVMTQDSLKDNVRVSNSLIDMYARCGCIEIA 282
P+ T +H RL ++ L+ N+ VS+SL+DMY +C +E A
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEIS--GLRRNIVVSSSLVDMYGKCNDVETA 185
Query: 283 RQVFDGML--HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA--LTA 338
R+VFD M+ R +VSW S+I +A N EA+ F S + A ++A
Sbjct: 186 RRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISA 245
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEV 398
CS G + G + R + + L+D+Y++ G L A + + ++ + V
Sbjct: 246 CSSLGRLQWGKVAHGLVTRGGYESNTVVATS-LLDMYAKCGSLSCAEKIF--LRIRCHSV 302
Query: 399 VLGSLLAACRTKGEIGLAEKVMKYLVELDPGG-DSNYVLLSNIYAA 443
+ S + K + GL E +K E+ G + NYV L + A
Sbjct: 303 I--SYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHA 346
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 44/246 (17%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
+H L + D V N L+ Y + I AR++FD M +VSW S+I G+ G
Sbjct: 51 LHTLTLKLGFASDTFTV-NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 309 LADEALSFFNSMQKEG-FEPDGVSYTGALTACS-----------HAGLIDEGLR------ 350
ALS F M ++ P+ ++ ACS HA L GLR
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 351 --------IFNKMKRVRRIAPRIEHYG-------CLVDLYSRAGRLEEALDVIKNMPM-- 393
N ++ RR+ + YG ++ Y++ R EA+++ ++
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 394 ---KPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL---LSNIYAAVGKW 447
+ N+ +L S+++AC + G + KV LV G +SN V+ L ++YA G
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWG-KVAHGLVT-RGGYESNTVVATSLLDMYAKCGSL 287
Query: 448 DGANKV 453
A K+
Sbjct: 288 SCAEKI 293
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 170/319 (53%), Gaps = 14/319 (4%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPS-SVSFGA 114
V+W + ++ + ++G +A F M V PN T + ++S C+ PS + S
Sbjct: 229 VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVK 288
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL-RNLVSWNTMLDGYMR 173
+ +L + V TAL+DM+AK ++ SAR +F+++G RNLV+WN M+ GY R
Sbjct: 289 LIDEKRVRL-----NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTR 343
Query: 174 SGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA-PDYVTVXX 232
G++ A QLFD P RN +SW +LI G+ A+E F +M G + PD VT+
Sbjct: 344 IGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMIS 403
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
+ + ++ +K N SLI MYAR G + A++VFD M R
Sbjct: 404 VLSACGHMADLELGDCIVDYI-RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 293 TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+VS+N++ FAANG E L+ + M+ EG EPD V+YT LTAC+ AGL+ EG RIF
Sbjct: 463 DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
Query: 353 NKMKRVRRIAPRIEHYGCL 371
++ P +HY C+
Sbjct: 523 KSIRN-----PLADHYACM 536
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 159/370 (42%), Gaps = 70/370 (18%)
Query: 108 SSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR-------- 159
S+ FG A KLG D V ++DMY K +V+SAR VFDQ+ R
Sbjct: 115 SAGRFGILFQALVEKLGF-FKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 160 -----------------------NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWT 196
++VSW M+ G+ + ++E+A + FD P ++ +SW
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWN 233
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
A++ G+ + + AL F +M GV P+ T + +L+ +
Sbjct: 234 AMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI-DE 292
Query: 257 DSLKDNVRVSNSLIDMYARC--------------------------------GCIEIARQ 284
++ N V +L+DM+A+C G + ARQ
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAG 343
+FD M R +VSWNS+I G+A NG A A+ FF M G +PD V+ L+AC H
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVV-LGS 402
++ G I + +++ +I Y L+ +Y+R G L EA V MK +VV +
Sbjct: 413 DLELGDCIVDYIRK-NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDE--MKERDVVSYNT 469
Query: 403 LLAACRTKGE 412
L A G+
Sbjct: 470 LFTAFAANGD 479
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 18/246 (7%)
Query: 183 LFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXX 242
+FD N ++ F K D L + + G+ PD +
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 243 XXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIV 302
V +L +D V N ++DMY + +E AR+VFD + R WN +I
Sbjct: 122 LFQAL-VEKLGFFKDPY-----VRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIA 362
G+ G +EA F+ M E D VS+T +T + ++ + F++M
Sbjct: 176 GYWKWGNKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLENARKYFDRMPE----- 226
Query: 363 PRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKV 419
+ + ++ Y++ G E+AL + +M ++PNE +++AC + + L +
Sbjct: 227 KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSL 286
Query: 420 MKYLVE 425
+K + E
Sbjct: 287 VKLIDE 292
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 223/488 (45%), Gaps = 87/488 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W++ IA + ++GQ EA S F M ++PN +TL ++L GCA ++ G +
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA---GVAASRLGKS 422
Query: 116 VHAYARKLGLD------------------------------MNDVKVGTALIDMYAKSGN 145
+H YA K ++ + D AL Y + G+
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 146 VDSARLVFDQMGL-------RNLVSW--------------------------------NT 166
+ A V+ M L R +V +
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHA 542
Query: 167 MLDGYMRSGEIEDALQLFDEFPV-RNAISWTALIGGFVKKDHHKQALECFREMQLSGVAP 225
+++ + + + A+ LFD+ ++ +SW ++ G++ ++A+ FR+M++ P
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP 602
Query: 226 DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
+ VT VH + Q V NSL+DMYA+CG IE + +
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHS-SLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKC 661
Query: 286 FDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
F + ++ +VSWN+++ +AA+GLA A+S F SMQ+ +PD VS+ L+AC HAGL+
Sbjct: 662 FIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLV 721
Query: 346 DEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLA 405
+EG RIF +M +I +EHY C+VDL +AG EA+++++ M +K + V G+LL
Sbjct: 722 EEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLN 781
Query: 406 ACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKK 465
+ R + L+ + LV+L+P S+ Y+ + N V R I+K
Sbjct: 782 SSRMHCNLWLSNAALCQLVKLEPLNPSH-------YSQDRRLGEVNNVSR------IKKV 828
Query: 466 PGFSSIEI 473
P S IE+
Sbjct: 829 PACSWIEV 836
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 173/440 (39%), Gaps = 80/440 (18%)
Query: 27 KQANPTFSPYNPNTNQSFSLRHNTKHTDP-TVAWTSSIAHHCRSGQLVEAASTFVRMREA 85
K N + Y+ Q S DP V W S I + R+G EA F M E
Sbjct: 34 KPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEE 93
Query: 86 E-VEPNNITLITLLSGCAHYPSPSSVSF--GATVHAYARKLGLDMNDVKVGTALIDMY-- 140
+ ++P+ + L CA S+ F G +H ++GL+ +DV +GTAL++MY
Sbjct: 94 KGIDPDKYSFTFALKACA-----GSMDFKKGLRIHDLIAEMGLE-SDVYIGTALVEMYCK 147
Query: 141 -----------------------------AKSGNVDSARLVF----------DQMGLRNL 161
A++G +A L+F D + L NL
Sbjct: 148 ARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNL 207
Query: 162 VSW---------------------------NTMLDGYMRSGEIEDALQLFDEFPVRNAIS 194
+ + ++D Y ++ A +F+E ++ S
Sbjct: 208 IPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESS 267
Query: 195 WTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVM 254
W ++ + ++ LE F M+ V + V +H +
Sbjct: 268 WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAV 327
Query: 255 TQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEAL 314
Q + D V V+ SL+ MY++CG +EIA Q+F + R +VSW+++I + G DEA+
Sbjct: 328 QQGLIGD-VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 315 SFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDL 374
S F M + +P+ V+ T L C+ G I + I +E ++ +
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISM 445
Query: 375 YSRAGRLEEALDVIKNMPMK 394
Y++ GR AL + +P+K
Sbjct: 446 YAKCGRFSPALKAFERLPIK 465
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 36/283 (12%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
+W + +A + +G E F MR +V N + + L A+ + G +H
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV---GDLVKGIAIH 323
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
YA + GL + DV V T+L+ MY+K G E+
Sbjct: 324 DYAVQQGL-IGDVSVATSLMSMYSKCG-------------------------------EL 351
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
E A QLF R+ +SW+A+I + + H +A+ FR+M + P+ VT+
Sbjct: 352 EIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
+H + D ++ + + ++I MYA+CG A + F+ + + V++
Sbjct: 412 AGVAASRLGKSIHCYAIKAD-IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAF 470
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
N++ G+ G A++A + +M+ G PD + G L C+
Sbjct: 471 NALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 152/367 (41%), Gaps = 44/367 (11%)
Query: 134 TALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAI 193
T L+ M + N V + + L N +++ Y + + +FD +
Sbjct: 6 TNLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVV 65
Query: 194 SWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRL 252
W ++I G+ + H++AL F M + G+ PD + +H L
Sbjct: 66 LWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDL 125
Query: 253 VMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADE 312
+ + L+ +V + +L++MY + + ARQVFD M + +V+WN+++ G A NG +
Sbjct: 126 I-AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTA-----------CSHAGLIDEGL------------ 349
AL F+ M+ + D VS + A C H +I +G
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMY 244
Query: 350 ----------RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL---DVIKNMPMKPN 396
+F ++ R +G ++ Y+ G EE L D+++N ++ N
Sbjct: 245 CNCADLYAAESVFEEVWRKDE-----SSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299
Query: 397 EVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL-LSNIYAAVGKWDGANKVRR 455
+V S L A G++ + Y V+ GD + L ++Y+ G+ + A ++
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 456 AMKDRGI 462
++DR +
Sbjct: 360 NIEDRDV 366
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 214/460 (46%), Gaps = 37/460 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
T+ + + +A CR+G ++A F M + VE + +L + + C S VS
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACG-LVSEKKVS--EQ 438
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H + K G N + TAL+DM + + A +FDQ W + LD
Sbjct: 439 IHGFCIKFGTAFNPC-IQTALLDMCTRCERMADAEEMFDQ--------WPSNLD------ 483
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECF-REMQLSGVAPDYVTVXXXX 234
++ + T++IGG+ + +A+ F R + + D V++
Sbjct: 484 ---------------SSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLIL 528
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM 294
+H + D + + NSLI MYA+C + A ++F+ M +
Sbjct: 529 AVCGTLGFREMGYQIHCYALKAGYFSD-ISLGNSLISMYAKCCDSDDAIKIFNTMREHDV 587
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC--SHAGLIDEGLRIF 352
+SWNS+I + DEAL+ ++ M ++ +PD ++ T ++A + + + +F
Sbjct: 588 ISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLF 647
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
MK + I P EHY V + G LEEA D I +MP++P VL +LL +CR
Sbjct: 648 LSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSN 707
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIE 472
+A++V K ++ P S Y+L SNIY+A G W + +R M++RG RK P S I
Sbjct: 708 TSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWII 767
Query: 473 IDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPD 512
++ I+ F A D SH + IY LE+L E GY P+
Sbjct: 768 HENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPN 807
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 166/355 (46%), Gaps = 14/355 (3%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAE-VEPNNITLITLLSGCAHYPSPSSVSF-GAT 115
+W + ++ + G+ +A F M E ++ TL TLLS C + SSV G
Sbjct: 251 SWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC----TDSSVLLRGRE 306
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H A ++GL M ++ V ALI Y+K ++ +++ M ++ V++ M+ YM G
Sbjct: 307 LHGRAIRIGL-MQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFG 365
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++ A+++F +N I++ AL+ GF + H +AL+ F +M GV ++
Sbjct: 366 MVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVD 425
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR--T 293
+H + + N + +L+DM RC + A ++FD +
Sbjct: 426 ACGLVSEKKVSEQIHGFCIKFGT-AFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDS 484
Query: 294 MVSWNSIIVGFAANGLADEALSFFN-SMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF 352
+ SII G+A NGL D+A+S F+ ++ ++ D VS T L C G + G +I
Sbjct: 485 SKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIH 544
Query: 353 NKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
+ + I L+ +Y++ ++A+ + M+ ++V+ + L +C
Sbjct: 545 CYALKAGYFSD-ISLGNSLISMYAKCCDSDDAIKIFNT--MREHDVISWNSLISC 596
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 132/329 (40%), Gaps = 71/329 (21%)
Query: 53 TDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAE-VEPNNITLITLLSGCAHYPSPSSV 110
+ PTV ++T+ I+ R +EA F RMR+A V+PN T + +L+ C S
Sbjct: 141 SSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRV---SRF 197
Query: 111 SFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDG 170
S G +H K G +N V V +L+ +Y K DS
Sbjct: 198 SLGIQIHGLIVKSGF-LNSVFVSNSLMSLYDK----DSG--------------------- 231
Query: 171 YMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREM-QLSGVAPDYVT 229
+D L+LFDE P R+ SW ++ VK+ +A + F EM ++ G D T
Sbjct: 232 ----SSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFT 287
Query: 230 VXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYAR-------------- 275
+ +H + + L + V+N+LI Y++
Sbjct: 288 LSTLLSSCTDSSVLLRGRELHGRAI-RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM 346
Query: 276 -----------------CGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFN 318
G ++ A ++F + + +++N+++ GF NG +AL F
Sbjct: 347 MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFT 406
Query: 319 SMQKEGFEPDGVSYTGALTACSHAGLIDE 347
M + G E S T A+ AC GL+ E
Sbjct: 407 DMLQRGVELTDFSLTSAVDAC---GLVSE 432
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 124/266 (46%), Gaps = 9/266 (3%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSG-V 223
N ++ Y++ G +A+ +F +S+TALI GF + + +AL+ F M+ +G V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYAR---CGCIE 280
P+ T +H L++ L ++V VSNSL+ +Y + C +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFL-NSVFVSNSLMSLYDKDSGSSCDD 236
Query: 281 IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK-EGFEPDGVSYTGALTAC 339
+ + +FD + R + SWN+++ G + +A F M + EGF D + + L++C
Sbjct: 237 VLK-LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVV 399
+ + ++ G + + R+ + + L+ YS+ +++ ++ + M M + V
Sbjct: 296 TDSSVLLRGRELHGRAIRI-GLMQELSVNNALIGFYSKFWDMKK-VESLYEMMMAQDAVT 353
Query: 400 LGSLLAACRTKGEIGLAEKVMKYLVE 425
++ A + G + A ++ + E
Sbjct: 354 FTEMITAYMSFGMVDSAVEIFANVTE 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 260 KDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNS 319
++ R+ N+LI Y + G A VF + T+VS+ ++I GF+ L EAL F
Sbjct: 111 EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFR 170
Query: 320 MQKEGF-EPDGVSYTGALTACSHAGLIDEGLRI 351
M+K G +P+ ++ LTAC G++I
Sbjct: 171 MRKAGLVQPNEYTFVAILTACVRVSRFSLGIQI 203
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 208/449 (46%), Gaps = 38/449 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V+W I SG A F MRE E++P+ T+ ++S C+ +S G
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDL---RELSKGKQ 256
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
A K+G N + +G IDM++K +D
Sbjct: 257 ALALCIKMGFLSNSIVLGAG-IDMFSKCNRLD---------------------------- 287
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
D+++LF E +++ ++IG + + AL F V PD T
Sbjct: 288 ---DSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLS 344
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
VH LV+ + + V+ SL++MY + G +++A VF + ++
Sbjct: 345 SMNAVMLDHGAD-VHSLVI-KLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLI 402
Query: 296 SWNSIIVGFAANGLADEALSFFNSM-QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
WN++I+G A N A E+L+ FN + + +PD V+ G L AC +AG ++EG++IF+
Sbjct: 403 FWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSS 462
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M++ + P EHY C+++L R G + EA D+ +P +P+ + +L A G+
Sbjct: 463 MEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTR 522
Query: 415 LAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEID 474
LAE V K ++E +P Y++L IY +W+ + K+R AM + ++ G S I I+
Sbjct: 523 LAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIE 582
Query: 475 SSIYKFVAGDKSHEENGSIYASLELLSFE 503
SS++ F A A L+LLS++
Sbjct: 583 SSVFSFEADQLQIHGGHDTCALLDLLSWD 611
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 144/298 (48%), Gaps = 6/298 (2%)
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTML 168
S + VHA + G + G + +Y KSG+V +A +FD + +N ++WN L
Sbjct: 19 SPTLAKIVHAQLLEAGF-VRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCL 77
Query: 169 DGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
G ++G + +AL LFDE P R+ +SW +I G V H+ + F +MQ + P
Sbjct: 78 KGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEF 137
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
T +H + + N+ V NS++DMY R G + A VF
Sbjct: 138 TFSILASLVTCVRHGEQ---IHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLT 194
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
M R +VSWN +I+ + +G + AL F M++ +PD + + ++ CS + +G
Sbjct: 195 MEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
+ ++ ++ I G +D++S+ RL++++ + + + K + V+ S++ +
Sbjct: 255 KQALALCIKMGFLSNSIV-LGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGS 310
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 219/487 (44%), Gaps = 59/487 (12%)
Query: 40 TNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLS 99
T Q+ L T H D V+W S I+ ++G +A + F + +E + +L T+L+
Sbjct: 445 TTQAELLFKTTTHRD-LVSWNSMISAFSQNGFTHKAKNLFKEVV-SEYSCSKFSLSTVLA 502
Query: 100 GCAHYPSPSSVSFGATVHAYARKLG------------LDMNDVKVGTALIDMYAKSGNVD 147
S S+ FG +VH + +KLG + D+ ++I A SG+
Sbjct: 503 ILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHL 562
Query: 148 SARLVFDQMG--------------------------------------LRNLVSW--NTM 167
+ F M LR L + NT+
Sbjct: 563 ESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTL 622
Query: 168 LDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
+ Y R +IE A+++F N SW +I + ++ + FR ++L P+
Sbjct: 623 ITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNE 679
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
+T H + + + N VS +L+DMY+ CG +E +VF
Sbjct: 680 ITFVGLLSASTQLGSTSYGMQAH-CHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR 738
Query: 288 GMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEG-FEPDGVSYTGALTACSHAGLID 346
++ +WNS+I +G+ ++A+ F + EP+ S+ L+ACSH+G ID
Sbjct: 739 NSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFID 798
Query: 347 EGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAA 406
EGL + +M+ + P EH +VD+ RAG+L EA + I + V G+LL+A
Sbjct: 799 EGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSA 858
Query: 407 CRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKP 466
C G+ L ++V + L E++P S Y+ L+N Y +G W+ A ++R+ ++D ++K P
Sbjct: 859 CNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLP 918
Query: 467 GFSSIEI 473
G+S I++
Sbjct: 919 GYSVIDV 925
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 158/370 (42%), Gaps = 38/370 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
+ W S I ++G+ + A F+ M E ++ TL+ S + S +
Sbjct: 154 IVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSM---L 210
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H A + GL + D + AL+++YAK N+ SA VF M R++
Sbjct: 211 HCLAIETGL-VGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDI--------------- 254
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+SW ++ + H +++L+ F+ M SG D VT
Sbjct: 255 ----------------VSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 237 XXXXXXXXXXXWVHRLVMTQD-SLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H LV+ S + +V V NS+I MY++CG E A VF+ ++ R ++
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQK-EGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
S N+I+ GFAANG+ +EA N MQ + +PD + + C EG +
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
R+ + +E ++D+Y + G +A + K + + V S+++A G
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSWNSMISAFSQNGFTH 477
Query: 415 LAEKVMKYLV 424
A+ + K +V
Sbjct: 478 KAKNLFKEVV 487
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 111/275 (40%), Gaps = 37/275 (13%)
Query: 51 KHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSV 110
+H D V+W + + +G ++ F M + E + +T ++S C+ S +
Sbjct: 250 EHRD-IVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS---SIEEL 305
Query: 111 SFGATVHAYARKLGLDMN-DVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLD 169
+ G ++H K G V VG ++I MY+K G+
Sbjct: 306 TLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT----------------------- 342
Query: 170 GYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ-LSGVAPDYV 228
E A +F+E R+ IS A++ GF ++A +MQ + + PD
Sbjct: 343 --------EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIA 394
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
TV VH + + + V NS+IDMY +CG A +F
Sbjct: 395 TVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT 454
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKE 323
HR +VSWNS+I F+ NG +A + F + E
Sbjct: 455 TTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE 489
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 2/235 (0%)
Query: 158 LRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFRE 217
L++L + + +L Y R+GE+ + LFDE ++ I W ++I + + A+ F E
Sbjct: 119 LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIE 178
Query: 218 MQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG 277
M G D T+ +H L + + L + + N+L+++YA+
Sbjct: 179 MIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAI-ETGLVGDSSLCNALMNLYAKGE 237
Query: 278 CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALT 337
+ A VF M HR +VSWN+I+ ANG ++L +F SM G E D V+++ ++
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 338 ACSHAGLIDEGLRIFN-KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
ACS + G + +K + ++ +YS+ G E A V + +
Sbjct: 298 ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 216/434 (49%), Gaps = 23/434 (5%)
Query: 66 HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGL 125
+C G + EA F R+ PN ++ +++SGC S FG R+L L
Sbjct: 345 YCSCGDMREAFYVFGRIHN----PNLVSWNSIISGC------SENGFGEQAMLMYRRL-L 393
Query: 126 DMN----DVKVGTALIDMYAKSGNVDSARLVFDQMGL----RNLVSWNTMLDGYMRSGEI 177
M+ D +A I A+ +L+ Q+ R++ T+L Y ++ E
Sbjct: 394 RMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREA 453
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
E A ++FD R+ + WT +I G + + + A++ F EM D ++
Sbjct: 454 ESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
H L + + + V +L+DMY + G E A +F + + W
Sbjct: 514 SDMAMLRQGEVFHCLAI-RTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCW 572
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
NS++ ++ +G+ ++ALSFF + + GF PD V+Y L ACSH G +G ++N+MK
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE 632
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVL-GSLLAACRTKGEIGLA 416
+ I +HY C+V+L S+AG ++EAL++I+ P N+ L +LL+AC + +
Sbjct: 633 -QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIG 691
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
+ +++LDP + ++LLSN+YA G+W+ ++RR ++ K PG S IE++++
Sbjct: 692 LYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNN 751
Query: 477 IYK-FVAGDKSHEE 489
+ F +GD+S+ E
Sbjct: 752 NTQVFSSGDQSNPE 765
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 166/376 (44%), Gaps = 36/376 (9%)
Query: 63 IAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARK 122
I+ + R L +A F +M + NI + LS Y VS G+++H+ K
Sbjct: 29 ISMYVRCSSLEQARKVFDKMPQ-----RNIVTLFGLSAVFEY-----VSMGSSLHSQIIK 78
Query: 123 LG-------LDMNDVKVGTALIDMYAKSGNV---DSARLVFDQM-------GLRNLVSWN 165
LG + +N++ ++++++ K ++ AR + + + + N
Sbjct: 79 LGSFQMIFFMPLNEI--ASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANN 136
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKK-DHHKQALECFREMQLSGVA 224
++ Y+R G +E A ++FD+ P RN +S+ AL + + D A M V
Sbjct: 137 NLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK 196
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
P+ T ++ ++ + DNV V S++ MY+ CG +E AR+
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQII-KLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
+FD + +R V+WN++IVG N ++ L FF +M G +P +Y+ L CS G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
G I ++ +A + L+D+Y G + EA V + PN V S++
Sbjct: 316 YSLGKLIHARIIVSDSLAD-LPLDNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSII 373
Query: 405 AACRTKGEIGLAEKVM 420
+ C E G E+ M
Sbjct: 374 SGC---SENGFGEQAM 386
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 171/389 (43%), Gaps = 38/389 (9%)
Query: 53 TDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
T+ A + I+ + R G L +A F +M V N L S + P +S +F
Sbjct: 129 TESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYN----ALYSAYSRNPDFASYAF 184
Query: 113 GATVHA---YAR----------KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR 159
T H Y + ++ + DV +G++L K G D
Sbjct: 185 PLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSD------------ 232
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
N+V ++L Y G++E A ++FD R+A++W +I G +K D + L FR M
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
+SGV P T +H ++ DSL D + + N+L+DMY CG +
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD-LPLDNALLDMYCSCGDM 351
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGF-EPDGVSYTGALTA 338
A VF + + +VSWNSII G + NG ++A+ + + + PD +++ A++A
Sbjct: 352 REAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG-CLVDLYSRAGRLEEALDVIKNMPMKPNE 397
+ G + ++ ++ R G L+ +Y + E A V MK +
Sbjct: 412 TAEPERFVHGKLLHGQVTKLGY--ERSVFVGTTLLSMYFKNREAESAQKVFD--VMKERD 467
Query: 398 VVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
VVL + + ++ +G +E +++ +E+
Sbjct: 468 VVLWTEMIVGHSR--LGNSELAVQFFIEM 494
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V WT I H R G A F+ M + + +L +++ C+ + + G
Sbjct: 468 VVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDM---AMLRQGEV 524
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
H A + G D + V AL+DMY K+G ++A +F +L WN+ML Y + G
Sbjct: 525 FHCLAIRTGFDC-VMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHG 583
Query: 176 EIEDALQLFDEFP----VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
+E AL F++ + +A+++ +L+ + Q + +M+ G+ +
Sbjct: 584 MVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGF 639
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 201/420 (47%), Gaps = 48/420 (11%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + ++ R+G+ EA F M VE + TL +++ CA S + G V
Sbjct: 151 VSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCA---SLKILQQGKQV 207
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA G D+ V +GTA+I Y+ G ++ A V++ + +
Sbjct: 208 HAMVVVTGRDL--VVLGTAMISFYSSVGLINEAMKVYNSLNVHT---------------- 249
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
DE + +LI G ++ ++K+A + +S P+ +
Sbjct: 250 --------DE------VMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAG 290
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H + + + D+ ++ N L+DMY +CG I AR +F + +++VS
Sbjct: 291 CSDNSDLWIGKQIHCVALRNGFVSDS-KLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVS 349
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEG--FEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
W S+I +A NG +AL F M +EG P+ V++ ++AC+HAGL+ EG F
Sbjct: 350 WTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGM 409
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNE----VVLGSLLAACRTK 410
MK R+ P EHY C +D+ S+AG EE +++ M N+ + ++L+AC
Sbjct: 410 MKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLN 469
Query: 411 GEIGLAEKVMKYLV-ELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFS 469
++ E V + L+ E P S YVL+SN YAA+GKWD ++R +K++G+ K G S
Sbjct: 470 MDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 7/257 (2%)
Query: 153 FDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQAL 212
F ++G + S N +L A LFDE P R+ S + + ++ + L
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 213 ECFREMQLSGVAPDYV--TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLI 270
F +Q+ +PD T VH L++ Q + + +LI
Sbjct: 70 ALF--LQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS-KTALI 126
Query: 271 DMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGV 330
DMY++ G + + +VF+ + + +VSWN+++ GF NG EAL F +M +E E
Sbjct: 127 DMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEF 186
Query: 331 SYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKN 390
+ + + C+ ++ +G ++ + R + ++ YS G + EA+ V +
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTGR--DLVVLGTAMISFYSSVGLINEAMKVYNS 244
Query: 391 MPMKPNEVVLGSLLAAC 407
+ + +EV+L SL++ C
Sbjct: 245 LNVHTDEVMLNSLISGC 261
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 183/477 (38%), Gaps = 93/477 (19%)
Query: 68 RSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDM 127
RSG + + F+++ A + ++ T +L C+ P + G VHA K G +
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPET---GRQVHALMIKQGAET 117
Query: 128 NDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEF 187
+ TALIDMY+K G+ + D++++F+
Sbjct: 118 GTIS-KTALIDMYSKYGH-------------------------------LVDSVRVFESV 145
Query: 188 PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXX 247
++ +SW AL+ GF++ K+AL F M V T+
Sbjct: 146 EEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGK 205
Query: 248 WVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-LHRTMVSWNSIIVGFAA 306
VH +V+ +D V + ++I Y+ G I A +V++ + +H V NS+I G
Sbjct: 206 QVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIR 263
Query: 307 NGLADEALSFFNSMQ------------------------------KEGFEPDGVSYTGAL 336
N EA + + + GF D G +
Sbjct: 264 NRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLM 323
Query: 337 TACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM----- 391
G I + IF + + + + ++D Y+ G +AL++ + M
Sbjct: 324 DMYGKCGQIVQARTIFRAIP-----SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGS 378
Query: 392 PMKPNEVVLGSLLAACRTKGEIGLAEK---VMKYLVELDPGGDSNYVLLSNIYAAVGKWD 448
+ PN V +++AC G + ++ +MK L PG + +YV +I + G+ +
Sbjct: 379 GVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTE-HYVCFIDILSKAGETE 437
Query: 449 GANKVRRAMKDRGIRKKP--------GFSSIEIDSSIYKFVAG---DKSHEENGSIY 494
++ M + + P S+ +D + ++VA +++ EN SIY
Sbjct: 438 EIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIY 494
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 217/486 (44%), Gaps = 70/486 (14%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPS-------PS 108
V+WT+ I+ R G +A F M +V+ N T ++L C
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG 137
Query: 109 SVSFG----------ATVHAYAR-------KLGLDM---NDVKVGTALIDMYAKSGNVDS 148
SV G A + YAR +L D D+ A+ID Y + D+
Sbjct: 138 SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADT 197
Query: 149 ARLVFDQM--------------------------------GL-------RNLVSWNTMLD 169
+ +F M GL R+ ++++
Sbjct: 198 SFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVN 257
Query: 170 GYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDH-HKQALECFREMQLSGVAPDYV 228
Y++ G + +A +L + R+ +S TALI GF ++++ A + F++M D V
Sbjct: 258 AYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEV 317
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDG 288
V +H + ++ +V + NSLIDMYA+ G IE A F+
Sbjct: 318 VVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEE 377
Query: 289 MLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
M + + SW S+I G+ +G ++A+ +N M+ E +P+ V++ L+ACSH G + G
Sbjct: 378 MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP--MKPNEVVLGSLLAA 406
+I++ M I R EH C++D+ +R+G LEEA +I++ + + G+ L A
Sbjct: 438 WKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDA 497
Query: 407 CRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRG-IRKK 465
CR G + L++ L+ ++P NY+ L+++YAA G WD A R+ MK+ G K
Sbjct: 498 CRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKA 557
Query: 466 PGFSSI 471
PG+S +
Sbjct: 558 PGYSLV 563
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 155/351 (44%), Gaps = 59/351 (16%)
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
NL + ++D Y++ G+++ A +LFD R+ +SWTA+I F + +H AL F+EM
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
V + T +H V + + N+ V ++L+ +YARCG +
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV-EKGNCAGNLIVRSALLSLYARCGKM 164
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
E AR FD M R +VSWN++I G+ AN AD + S F M EG +PD ++ L
Sbjct: 165 EEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLL--- 221
Query: 340 SHAGLIDEGLRIFNKMKRVR------RIAPRIEHYGCLVDLYSRAGRL------------ 381
A ++ + L I +++ + R + I LV+ Y + G L
Sbjct: 222 -RASIVVKCLEIVSELHGLAIKLGFGRSSALIRS---LVNAYVKCGSLANAWKLHEGTKK 277
Query: 382 --------------------EEALDVIKN---MPMKPNEVVLGSLLAACRTKGEIGLAEK 418
+A D+ K+ M K +EVV+ S+L C T + + +
Sbjct: 278 RDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQ 337
Query: 419 VMKYL-----VELDPG-GDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
+ + + D G+S L ++YA G+ + A MK++ +R
Sbjct: 338 IHGFALKSSQIRFDVALGNS----LIDMYAKSGEIEDAVLAFEEMKEKDVR 384
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 160/337 (47%), Gaps = 10/337 (2%)
Query: 77 STFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTAL 136
S F++M + P T T L C V+ +H+ ++G + ND V ++L
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSCC-------VTELQQLHSVIVRMGYEDNDY-VLSSL 453
Query: 137 IDMYAKSGNVDSARLVFD-QMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISW 195
+ YAK+ ++ A L+ D G ++V N + Y R G+ ++++L + +SW
Sbjct: 454 MRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSW 513
Query: 196 TALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMT 255
I + D+H++ +E F+ M S + PD T +H L+
Sbjct: 514 NIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITK 573
Query: 256 QDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALS 315
D + V N LIDMY +CG I +VF+ + +++W ++I +G EAL
Sbjct: 574 TDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALE 633
Query: 316 FFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLY 375
F GF+PD VS+ LTAC H G++ EG+ +F KMK + P ++HY C VDL
Sbjct: 634 KFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDY-GVEPEMDHYRCAVDLL 692
Query: 376 SRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGE 412
+R G L+EA +I+ MP + V + L C E
Sbjct: 693 ARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAE 729
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 140/329 (42%), Gaps = 40/329 (12%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V++ + I + + G + +A F MR PN T+ LLS CA V G +
Sbjct: 81 VSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASL----DVRAGTQL 135
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + K GL M D VGT L+ +Y + ++ A VF+ M ++L +WN M+ G
Sbjct: 136 HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGF 195
Query: 177 IEDALQLFDEFPVRNAISWT-ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+++ + F E VR S T + G +K + L+ +++ S
Sbjct: 196 LKECMFFFREL-VRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSA------------- 241
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
T+ L + V NSLI Y +CG +A ++F +V
Sbjct: 242 -------------------TKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIV 282
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN+II A + +AL F SM + GF P+ +Y L S L+ G +I +
Sbjct: 283 SWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML 342
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
+ I L+D Y++ G LE++
Sbjct: 343 IK-NGCETGIVLGNALIDFYAKCGNLEDS 370
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 163/419 (38%), Gaps = 71/419 (16%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + I +S ++A FV M E PN T +++L + +S G +
Sbjct: 282 VSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLV---QLLSCGRQI 338
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYM-RSG 175
H K G + V +G ALID YAK GN++ +RL FD + +N+V WN +L GY + G
Sbjct: 339 HGMLIKNGCETGIV-LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG 397
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDH-HKQALE--CFREM-QLSGVAP------ 225
I L LF + L GF ++ AL+ C E+ QL V
Sbjct: 398 PI--CLSLFLQM----------LQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYED 445
Query: 226 -DYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
DYV L++ S +V N + +Y+R G + +
Sbjct: 446 NDYVLSSLMRSYAKNQLMNDAL-----LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVK 500
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
+ + VSWN I + + +E + F M + PD ++ L+ CS
Sbjct: 501 LISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCD 560
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL----------------------- 381
+ G I + + L+D+Y + G +
Sbjct: 561 LTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALIS 620
Query: 382 --------EEALDVIK---NMPMKPNEVVLGSLLAACRTKGEI----GLAEKVMKYLVE 425
+EAL+ K ++ KP+ V S+L ACR G + GL +K+ Y VE
Sbjct: 621 CLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVE 679
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 62/319 (19%)
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+H A K GLD ++ V +LI Y K GN A +F G SW+
Sbjct: 237 LHCSATKKGLDC-EISVVNSLISAYGKCGNTHMAERMFQDAG-----SWDI--------- 281
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
+SW A+I K ++ +AL+ F M G +P+ T
Sbjct: 282 -----------------VSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLG 324
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H +++ ++ + + + N+LID YA+CG +E +R FD + + +V
Sbjct: 325 VSSLVQLLSCGRQIHGMLI-KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIV 383
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS-------HAGLIDEG 348
WN+++ G+ AN LS F M + GF P +++ AL +C H+ ++ G
Sbjct: 384 CWNALLSGY-ANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMG 442
Query: 349 LR----IFNKMKRVRRIAPRIEHYGCLVD----------------LYSRAGRLEEALDVI 388
+ + + R + L+D +YSR G+ E++ +I
Sbjct: 443 YEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLI 502
Query: 389 KNMPMKPNEVVLGSLLAAC 407
+ +P+ V +AAC
Sbjct: 503 STLE-QPDTVSWNIAIAAC 520
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 104/257 (40%), Gaps = 37/257 (14%)
Query: 85 AEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKL-GLDMNDVKVGTALIDMYAKS 143
++ +N +++LL+ C PS + +HA + L + + V V +I +Y K
Sbjct: 6 GDLANHNDRVVSLLNVCRKAPSFARTK---ALHALSITLCSVLLQPVYVCNNIISLYEKL 62
Query: 144 GNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFV 203
G V A VFDQM RN VS+NT++ GY + G+++ A W
Sbjct: 63 GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKA--------------WGV------ 102
Query: 204 KKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNV 263
F EM+ G P+ TV +H L + +
Sbjct: 103 -----------FSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQ--LHGLSLKYGLFMADA 149
Query: 264 RVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKE 323
V L+ +Y R +E+A QVF+ M +++ +WN ++ G E + FF + +
Sbjct: 150 FVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRM 209
Query: 324 GFEPDGVSYTGALTACS 340
G S+ G L S
Sbjct: 210 GASLTESSFLGVLKGVS 226
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 249 VHRLVMTQDS-LKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAAN 307
+H L +T S L V V N++I +Y + G + +A +VFD M R VS+N+II G++
Sbjct: 34 LHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKY 93
Query: 308 GLADEALSFFNSMQKEGFEPDGVSYTGALTACS---HAGLIDEGLRIFNKMKRVRRIAPR 364
G D+A F+ M+ G+ P+ + +G L+ S AG GL + +
Sbjct: 94 GDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGT 153
Query: 365 IEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVV--LGSLLAACRTKGEIGLAEKVMKY 422
CL+ LY R LE A V ++MP K E + SLL G G ++ M +
Sbjct: 154 -----CLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL------GHRGFLKECMFF 202
Query: 423 LVELDPGGDS 432
EL G S
Sbjct: 203 FRELVRMGAS 212
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 202/448 (45%), Gaps = 38/448 (8%)
Query: 29 ANPTFSPYNPNTNQSFSLR-HNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEV 87
AN Y+ + S S+R N ++W S ++ G ++++ F +M+
Sbjct: 252 ANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGK 311
Query: 88 EPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVD 147
P+ ++ L+ C+ S + G +H Y K+G D++ + V +ALIDMY K ++
Sbjct: 312 RPSIRPFMSFLNFCSR---NSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIE 368
Query: 148 SARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDH 207
++ L++ + NL N+++ M G +D +++F G + +
Sbjct: 369 NSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMF----------------GLMIDE- 411
Query: 208 HKQALECFREMQLSGVAPDYVTVXXXXXXXXXXX--XXXXXXWVHRLVMTQDSLKDNVRV 265
G D VT+ VH + D V V
Sbjct: 412 --------------GTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAAD-VAV 456
Query: 266 SNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGF 325
S SLID Y + G E++R+VFD + + SII G+A NG+ + + M +
Sbjct: 457 SCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNL 516
Query: 326 EPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL 385
PD V+ L+ CSH+GL++EG IF+ ++ I+P + Y C+VDL RAG +E+A
Sbjct: 517 IPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAE 576
Query: 386 DVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVG 445
++ + V SLL +CR + + + L+ L+P + Y+ +S Y +G
Sbjct: 577 RLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIG 636
Query: 446 KWDGANKVRRAMKDRGIRKKPGFSSIEI 473
++ + ++R R + ++ G+SS+ +
Sbjct: 637 DFEISRQIREIAASRELMREIGYSSVVV 664
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 147/362 (40%), Gaps = 6/362 (1%)
Query: 32 TFSPYNPNTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNN 91
+ +P+ FS +D I +SG L+ A F M +V N
Sbjct: 22 SLTPFIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYN 81
Query: 92 ITLITLLSGCAHY-PSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSAR 150
+ L+SG + Y S ++ A + + + + +++ + G R
Sbjct: 82 L----LISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCR 137
Query: 151 LVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQ 210
++ G N+ + ++ Y ++ AL+LFDE RN L+ F + K+
Sbjct: 138 VISLGFGC-NMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKR 196
Query: 211 ALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLI 270
E + M+L GVA + +T +H LV+ N+ V+N L+
Sbjct: 197 LFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLV 256
Query: 271 DMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGV 330
D Y+ CG + + + F+ + + ++SWNSI+ A G ++L F+ MQ G P
Sbjct: 257 DYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIR 316
Query: 331 SYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKN 390
+ L CS I G +I + ++ + L+D+Y + +E + + ++
Sbjct: 317 PFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQS 376
Query: 391 MP 392
+P
Sbjct: 377 LP 378
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 174/357 (48%), Gaps = 11/357 (3%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + + G EA F +M E V P N T+ +++ C+ ++ G +
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR---SLALEVGKVI 285
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
HA A KL + + D V T++ DMY K ++SAR VFDQ ++L SW + + GY SG
Sbjct: 286 HAIAVKLSV-VADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGL 344
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
+A +LFD P RN +SW A++GG+V +AL+ M+ D VT+
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH-RTMV 295
H + + NV V+N+L+DMY +CG ++ A F M R V
Sbjct: 405 CSGISDVQMGKQAHGFIY-RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SWN+++ G A G +++ALSFF MQ E +P + L C++ ++ G I +
Sbjct: 464 SWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFL 522
Query: 356 KR-VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKG 411
R +I I G +VD+YS+ + A++V K + + ++ S++ C G
Sbjct: 523 IRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNG 576
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 160/353 (45%), Gaps = 38/353 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V+W + + + + + EA MR+ +N+TL+ +L+ C+ S V G
Sbjct: 361 VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS---GISDVQMGKQA 417
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H + + G D N V V AL+DM Y + G
Sbjct: 418 HGFIYRHGYDTN-VIVANALLDM-------------------------------YGKCGT 445
Query: 177 IEDALQLFDEFP-VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
++ A F + +R+ +SW AL+ G + +QAL F MQ+ P T+
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLA 504
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H ++ +D K +V + +++DMY++C C + A +VF R ++
Sbjct: 505 GCANIPALNLGKAIHGFLI-RDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLI 563
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
WNSII G NG + E F ++ EG +PD V++ G L AC G ++ G + F+ M
Sbjct: 564 LWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSM 623
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACR 408
I+P++EHY C+++LY + G L + + + MP P +L + AC+
Sbjct: 624 STKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQ 676
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
N ++ Y + G ++DA +LF+E P R+ SW A+I + + FR M GV
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
+ +H V+ + NV + S++D+Y +C + AR+
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVV-KYGYSGNVDLETSIVDVYGKCRVMSDARR 218
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
VFD +++ + VSWN I+ + G DEA+ F M + P + + + ACS +
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
++ G I ++ +A + + D+Y + RLE A V
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTS-VFDMYVKCDRLESARRVF 321
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 150/385 (38%), Gaps = 13/385 (3%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
+W + I ++G E F RM V + +L C + +H
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILD---LRLLRQLH 185
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
K G N V + T+++D+Y K + AR VFD++ + VSWN ++ Y+ G
Sbjct: 186 CAVVKYGYSGN-VDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFN 244
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
++A+ +F + N + + ALE + + V V
Sbjct: 245 DEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSV 304
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSW 297
R V Q KD ++ S + YA G AR++FD M R +VSW
Sbjct: 305 FDMYVKCDRLESARRVFDQTRSKD-LKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N+++ G+ DEAL F M++E D V+ L CS + G + + R
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAE 417
+ L+D+Y + G L+ A + M +EV +LL +G +E
Sbjct: 424 -HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGV---ARVGRSE 479
Query: 418 KVMKYL----VELDPGGDSNYVLLS 438
+ + + VE P + LL+
Sbjct: 480 QALSFFEGMQVEAKPSKYTLATLLA 504
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 267 NSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFE 326
N I+ Y +CGC++ AR++F+ M R SWN++I A NG++DE F M ++G
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 327 PDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG---------CLVDLYSR 377
S+ G L +C GLI + ++ +R++ + YG +VD+Y +
Sbjct: 160 ATETSFAGVLKSC---GLILD-------LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGK 209
Query: 378 AGRLEEALDVIKNMPMKPNEV 398
+ +A V + + P++V
Sbjct: 210 CRVMSDARRVFDEI-VNPSDV 229
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 36/328 (10%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
++WT+ ++ + +G+ +A + V M++ P+ +T+ T+L CA ++ G +
Sbjct: 384 ISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAEL---RAIKQGKEI 440
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGE 176
H YA K L + +V + T+L+ MY+K G
Sbjct: 441 HCYALK-NLFLPNVSLVTSLMVMYSKCG-------------------------------V 468
Query: 177 IEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
E ++LFD RN +WTA+I +V+ + +E FR M LS PD VT+
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS 296
+H ++ ++ + VS +I MY +CG + A FD + + ++
Sbjct: 529 CSDLKALKLGKELHGHILKKE-FESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLT 587
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
W +II + N L +A++ F M GF P+ ++T L+ CS AG +DE R FN M
Sbjct: 588 WTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLML 647
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
R+ + P EHY +++L +R GR+EEA
Sbjct: 648 RMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 160/388 (41%), Gaps = 79/388 (20%)
Query: 77 STFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTAL 136
STF MRE V+ N +L + + S++ G HA A K GL N V + T+L
Sbjct: 200 STFTEMRELGVDLNVYSLSNVFKS---FAGASALRQGLKTHALAIKNGL-FNSVFLKTSL 255
Query: 137 IDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWT 196
+DMY K G ++GL A ++FDE R+ + W
Sbjct: 256 VDMYFKCG----------KVGL---------------------ARRVFDEIVERDIVVWG 284
Query: 197 ALIGGFVKKDHHKQALECFREM-QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMT 255
A+I G +AL FR M + P+ V + VH V+
Sbjct: 285 AMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Query: 256 QDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALS 315
+ + V + LID+Y +CG + R+VF G R +SW +++ G+AANG D+AL
Sbjct: 345 SKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR 404
Query: 316 FFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG--------------------------- 348
MQ+EGF PD V+ L C+ I +G
Sbjct: 405 SIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYS 464
Query: 349 --------LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPM---KPNE 397
+R+F+++++ ++ + ++D Y L ++V + M + +P+
Sbjct: 465 KCGVPEYPIRLFDRLEQ-----RNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDS 519
Query: 398 VVLGSLLAACRTKGEIGLAEKVMKYLVE 425
V +G +L C + L +++ ++++
Sbjct: 520 VTMGRVLTVCSDLKALKLGKELHGHILK 547
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 130/284 (45%), Gaps = 36/284 (12%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
TV WTS IA H R G EA S F M+ + NN+T++++L C S ++ G
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG---SVGALLLGKE 406
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
+HA K ++ N V +G+ L+ +Y K G
Sbjct: 407 LHAQIIKNSIEKN-VYIGSTLVWLYCKCG------------------------------- 434
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
E DA + + P R+ +SWTA+I G H +AL+ +EM GV P+ T
Sbjct: 435 ESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALK 494
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H + +L NV V ++LI MYA+CG + A +VFD M + +V
Sbjct: 495 ACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLV 553
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
SW ++I+G+A NG EAL M+ EGFE D + L+ C
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 159/339 (46%), Gaps = 37/339 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
++WT+ I+ R G ++A F+ M PN T+ ++L C+ ++ FG
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE---EKALRFGRQ 305
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSG 175
VH+ K + DV VGT+L+DMYAK G
Sbjct: 306 VHSLVVKRMIK-TDVFVGTSLMDMYAKC-------------------------------G 333
Query: 176 EIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXX 235
EI D ++FD RN ++WT++I ++ ++A+ FR M+ + + +TV
Sbjct: 334 EISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILR 393
Query: 236 XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV 295
+H ++ ++S++ NV + ++L+ +Y +CG A V + R +V
Sbjct: 394 ACGSVGALLLGKELHAQII-KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVV 452
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
SW ++I G ++ G EAL F M +EG EP+ +Y+ AL AC+++ + G I +
Sbjct: 453 SWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIA 512
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
K+ ++ + L+ +Y++ G + EA V +MP K
Sbjct: 513 KKNHALS-NVFVGSALIHMYAKCGFVSEAFRVFDSMPEK 550
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 175/381 (45%), Gaps = 24/381 (6%)
Query: 54 DPTVAWTSSIAHHC-RSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
D + + +++ C R G LV A F M E N +T ++ G Y
Sbjct: 114 DQVIYFGNNLISSCVRLGDLVYARKVFDSMPE----KNTVTWTAMIDGYLKY-------- 161
Query: 113 GATVHAYAR-----KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---GLRNLVSW 164
G A+A K G+ + ++ L+++ ++ + R V M G+ NL+
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE 221
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
++++ Y + GE+ AL+ FD ++ ISWTA+I +K H +A+ F M
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
P+ TV VH LV+ + +K +V V SL+DMYA+CG I R+
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKR-MIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
VFDGM +R V+W SII A G +EA+S F M++ + ++ L AC G
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLL 404
+ G + ++ + I + LV LY + G +A +V++ +P + + V +++
Sbjct: 401 LLLGKELHAQIIK-NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMI 458
Query: 405 AACRTKGEIGLAEKVMKYLVE 425
+ C + G A +K +++
Sbjct: 459 SGCSSLGHESEALDFLKEMIQ 479
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 124/245 (50%), Gaps = 13/245 (5%)
Query: 269 LIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
L++MY+ CG A VF+ M + + +W II FA NG ++A+ F+ ++EG PD
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
G + G AC G +DEGL F M R IAP IE Y LV++Y+ G L+EAL+ +
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 389 KNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWD 448
+ MPM+PN V +L+ R G + L + + + LDP + +
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNK-----------QSRE 463
Query: 449 GANKVRRA-MKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLC 507
G V+ + ++ ++K+ G + SS+ +F AGD + EN ++ L L +
Sbjct: 464 GFIPVKASDVEKESLKKRSGILH-GVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEV 522
Query: 508 GYVPD 512
GYV +
Sbjct: 523 GYVAE 527
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 167/382 (43%), Gaps = 45/382 (11%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCA-------------HYPSPSSVSFG 113
C+ ++ EAA RM P++IT L++G P P V F
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFN 357
Query: 114 ATVHAYARKLGLD---------------MNDVKVGTALIDMYAKSGNVDSARLVFDQM-- 156
+H + LD + DV +LI Y K G V A V M
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 157 -GLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQ 210
G + N+ S+ ++DG+ + G+I++A + +E N + + LI F K+ +
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 211 ALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLI 270
A+E FREM G PD T W+ R ++++ + + V N+LI
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV-TYNTLI 536
Query: 271 DMYARCGCIEIARQVFDGMLHR----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFE 326
+ + R G I+ AR++ + M+ + +++NS+I G G D+A S F M ++G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 327 PDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALD 386
P +S + +G+++E + F K +R P I + L++ RAGR+E+ L
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVE-FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 387 VIKNMP---MKPNEVVLGSLLA 405
+ + + + P+ V +L++
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMS 677
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 165/408 (40%), Gaps = 57/408 (13%)
Query: 84 EAEVEPNNITLITLLSGCAHYPS-------------PSSVSFGATVHAYARKLGLDMNDV 130
E + N+ L L+SG H + P+ +FG + A+ +N++
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA-----VNEI 233
Query: 131 KVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEF--- 187
+L+ K G V N V + T++ + + +ALQL +E
Sbjct: 234 DSALSLLRDMTKHGCVP------------NSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 188 -PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
V +A ++ +I G K D +A + M + G APD +T
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK------- 334
Query: 247 XWVHRLVMTQDSL----KDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR-----TMVSW 297
+ R+ +D K + + N+LI + G ++ A+ V M+ + ++
Sbjct: 335 --IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
NS+I G+ GL AL + M+ +G +P+ SYT + G IDE + N+M
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS- 451
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAACRTKGEIG 414
+ P + CL+ + + R+ EA+++ + MP KP+ SL++ EI
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 415 LAEKVMKYLV-ELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRG 461
A +++ ++ E Y L N + G+ A K+ M +G
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 41/214 (19%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPS--------- 106
TV + I+ C+ ++ EA F M +P+ T +L+SG
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 107 --------PSSVSFGATVHAY--------ARKLGLDMN------DVKVGTALIDMYAKSG 144
++V++ ++A+ ARKL +M D +LI ++G
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 145 NVDSARLVFDQMGLRN-----LVSWNTMLDGYMRSGEIEDALQLFDEFPVRNA----ISW 195
VD AR +F++M LR+ +S N +++G RSG +E+A++ E +R + +++
Sbjct: 579 EVDKARSLFEKM-LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 196 TALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
+LI G + + L FR++Q G+ PD VT
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 197/424 (46%), Gaps = 26/424 (6%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + + I C+ G++ A F M + +EP+ I TL+ G Y + G
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG---YFKAGMLGMGHK 342
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGY 171
+ + A G+ + DV V ++ ID+Y KSG++ +A +V+ +M + N+V++ ++ G
Sbjct: 343 LFSQALHKGVKL-DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 172 MRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
+ G I +A ++ + R + +++++LI GF K + + + +M G PD
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD- 460
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
V + + M S++ NV V NSLID + R + A +VF
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 288 GM----LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTA-CSHA 342
M + + ++ +++ G +EAL F M K G EPD ++Y + A C H
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVV 399
GL++F+ M+R +I+ I ++ L + R+E+A N+ M+P+ V
Sbjct: 581 K-PTIGLQLFDLMQR-NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 400 LGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL--LSNIYAAVGKWDGANKVRRAM 457
+++ + + AE++ + L+++ P G + L L ++ DGA ++ M
Sbjct: 639 YNTMICGYCSLRRLDEAERIFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Query: 458 KDRG 461
++G
Sbjct: 698 AEKG 701
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 195/462 (42%), Gaps = 63/462 (13%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V ++S+I + +SG L A+ + RM + PN +T L+ G +FG
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE-AFG-- 412
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFD---QMGLR-NLVSWNTMLDGY 171
++ K G++ + V ++LID + K GN+ S +++ +MG ++V + ++DG
Sbjct: 413 MYGQILKRGMEPSIVTY-SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 172 MRSGEIEDALQLFDEFPVR--------NAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
+ G + A++ F V+ N + + +LI G+ + + +AL+ FR M + G+
Sbjct: 472 SKQGLMLHAMR----FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVH-RL------------------------------ 252
PD T ++ R+
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 253 ---VMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFA 305
+M ++ + ++ V N +I + +C IE A + F+ ++ M V++N++I G+
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 306 ANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRI 365
+ DEA F ++ F P+ V+ T + +D +R+F+ M + P
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSKPNA 706
Query: 366 EHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKGEIGLAEKVMKY 422
YGCL+D +S++ +E + + + M K P+ V ++ +G + A +
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 423 LVELDPGGD-SNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
++ D Y +L Y VG+ A + M G++
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT- 115
V + + I +C +L EA F ++ PN +TL L+ H ++ GA
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI----HVLCKNNDMDGAIR 692
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGY 171
+ + + G N V G L+D ++KS +++ + +F++M + ++VS++ ++DG
Sbjct: 693 MFSIMAEKGSKPNAVTYG-CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
Query: 172 MRSGEIEDALQLF----DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+ G +++A +F D + + +++ LI G+ K +A + M +GV PD
Sbjct: 752 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM 320
D + V++ L+ + CG +V++ ++I GF G D A F M
Sbjct: 265 DQIEVASRLLSLVLDCGPAP------------NVVTFCTLINGFCKRGEMDRAFDLFKVM 312
Query: 321 QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
++ G EPD ++Y+ + AG++ G ++F++ + + + + +D+Y ++G
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH-KGVKLDVVVFSSTIDVYVKSGD 371
Query: 381 LEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEI----GLAEKVMK 421
L A V K M + PN V L+ G I G+ +++K
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 164/343 (47%), Gaps = 21/343 (6%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
A+++ I+ + RSG EA S F M+E + PN +T ++ C + F
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK----GGMEFKQVAK 325
Query: 118 AY--ARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGY 171
+ ++ G+ + + +L+ + ++ G ++AR +FD+M R ++ S+NT+LD
Sbjct: 326 FFDEMQRNGVQPDRITF-NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 172 MRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
+ G+++ A ++ + PV+ N +S++ +I GF K +AL F EM+ G+A D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
V+ + R M +K +V N+L+ Y + G + ++VF
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILR-EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 288 GMLHR----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
M +++++++I G++ GL EA+ F + G D V Y+ + A G
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALD 386
L+ + + ++M + I+P + Y ++D + R+ ++ + D
Sbjct: 564 LVGSAVSLIDEMTK-EGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 171/406 (42%), Gaps = 74/406 (18%)
Query: 55 PTVAWTSSIAHHCRSG--QLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
P + +++ C G + + A F M+ V+P+ IT +LL+ C+
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR--------- 351
Query: 113 GATVHAYARKLGLDM------NDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLV 162
G A AR L +M DV L+D K G +D A + QM ++ N+V
Sbjct: 352 GGLWEA-ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV 410
Query: 163 SWNTMLDGYMRSGEIEDALQLFDEFP----VRNAISWTALIGGFVKKDHHKQALECFREM 218
S++T++DG+ ++G ++AL LF E + +S+ L+ + K ++AL+ REM
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 219 QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG- 277
G+ D VT V M ++ + N+ ++LID Y++ G
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF-TEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 278 ---CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTG 334
+EI R+ L +V ++++I NGL A+S + M KEG P+ V+Y
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 335 ALTACSHAGLID------------------------EGLRI---FNKM------KRVRRI 361
+ A + +D EG R+ F ++ + +
Sbjct: 590 IIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDC 649
Query: 362 APRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAAC 407
++ C+++++ + +LE +KPN V ++L AC
Sbjct: 650 EEGMQELSCILEVFRKMHQLE----------IKPNVVTFSAILNAC 685
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 158/333 (47%), Gaps = 22/333 (6%)
Query: 131 KVGTALIDMYAKSGNVDSARLVFDQM---GLRNLV-SWNTMLDGYMRSGEIEDALQLFD- 185
K+ +A+I + G V A+ +F+ G N V +++ ++ Y RSG E+A+ +F+
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 186 --EFPVR-NAISWTALIGGFVKKD-HHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXX 241
E+ +R N +++ A+I K KQ + F EMQ +GV PD +T
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 242 XXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM-LHRTM---VSW 297
+ MT ++ +V N+L+D + G +++A ++ M + R M VS+
Sbjct: 354 LWEAARNLFD-EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
+++I GFA G DEAL+ F M+ G D VSY L+ + G +E L I +M
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKGEIG 414
V I + Y L+ Y + G+ +E V M + PN + +L+ +KG G
Sbjct: 473 V-GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY-SKG--G 528
Query: 415 LAEKVMKYLVELDPGG-DSNYVLLSNIYAAVGK 446
L ++ M+ E G ++ VL S + A+ K
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMVSWNSIIVGFAANGLA-DEALS 315
+ V ++LI Y R G E A VF+ M L +V++N++I G+ +
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 316 FFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLY 375
FF+ MQ+ G +PD +++ L CS GL + +F++M RRI + Y L+D
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN-RRIEQDVFSYNTLLDAI 384
Query: 376 SRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKGEIGLAEKV---MKYL-VELDP 428
+ G+++ A +++ MP+K PN V +++ G A + M+YL + LD
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD- 443
Query: 429 GGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRK 464
+Y L +IY VG+ + A + R M GI+K
Sbjct: 444 --RVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 249 VHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANG 308
VH + + + D + NS+I+MY+ CG +E A VF+ M R + +W +I FA NG
Sbjct: 203 VHEFITSSVGISD-ISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNG 261
Query: 309 LADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHY 368
++A+ F+ ++EG +PDG + AC G ++EGL F M + I P +EHY
Sbjct: 262 QGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHY 321
Query: 369 GCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDP 428
LV + + G L+EAL +++ M+PN + +L+ R G++ L ++ + +LD
Sbjct: 322 VSLVKMLAEPGYLDEALRFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDA 379
Query: 429 GGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHE 488
L A + ++ V+ ++ + K P + I AGD S
Sbjct: 380 S-----RLNKESKAGLVPVKSSDLVKEKLQR--MAKGPNY-------GIRYMAAGDISRP 425
Query: 489 ENGSIYASLELLSFELQLCGYVP 511
EN +Y +L+ L + GYVP
Sbjct: 426 ENRELYMALKSLKEHMIEIGYVP 448
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 151 LVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAISWTALIGGFVKKDHHKQ 210
+ +G+ ++ ++N++++ Y G +EDAL +F+ P RN +W +I F K +
Sbjct: 206 FITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGED 265
Query: 211 ALECFREMQLSGVAPD 226
A++ F + G PD
Sbjct: 266 AIDTFSRFKQEGNKPD 281
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 220/504 (43%), Gaps = 92/504 (18%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
T+ +++ + C G++ EA + RM E + P+ +T+ TL++G VS
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL---KGRVSEALV 196
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSWNTMLDGY 171
+ + G ++V G L + KSGN A +F +M RN+ V ++ ++D
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVL-NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 172 MRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
+ G +DAL LF+E ++ + +++++LIGG + REM + PD
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
VT ++LID++ + G + A+++++
Sbjct: 316 VTF------------------------------------SALIDVFVKEGKLLEAKELYN 339
Query: 288 GMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
M+ R + +++NS+I GF EA F+ M +G EPD V+Y+ + + A
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVL 400
+D+G+R+F ++ + + P Y LV + ++G+L A ++ + M + P+ V
Sbjct: 400 RVDDGMRLFREISS-KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 401 GSLLAACRTKGEIGLA----EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRA 456
G LL GE+ A EK+ K + L G Y ++ + K D A + +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTL---GIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 457 MKDRGIR--------------KKPGFSSIEI------------DSSIYKFVAGDKSHEEN 490
+ D+G++ KK S ++ D Y + ++H
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI--RAHLGG 573
Query: 491 GSIYASLELLSFELQLCGYVPDFS 514
+ +S+EL+ E+++CG+ D S
Sbjct: 574 SGLISSVELIE-EMKVCGFSADSS 596
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 41 NQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG 100
NQ F L + V ++ I +C++ ++ + F + + PN IT TL+ G
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 101 CAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRN 160
+ ++ + G+ + V G L+D +G ++ A +F++M
Sbjct: 430 ---FCQSGKLNAAKELFQEMVSRGVPPSVVTYGI-LLDGLCDNGELNKALEIFEKMQKSR 485
Query: 161 LV----SWNTMLDGYMRSGEIEDALQLF----DEFPVRNAISWTALIGGFVKKDHHKQAL 212
+ +N ++ G + +++DA LF D+ + +++ +IGG KK +A
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 213 ECFREMQLSGVAPDYVT 229
FR+M+ G PD T
Sbjct: 546 MLFRKMKEDGCTPDDFT 562
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 199/475 (41%), Gaps = 99/475 (20%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLS--GCAHYP---------- 105
++TS I+ SG+ EA + F +M E +P IT +L+ G P
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 106 ------SPSSVSFG--------ATVHAYARKLGLDMN------DVKVGTALIDMYAKSGN 145
+P + ++ ++H A ++ +M D AL+D+Y KS
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 146 VDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTA 197
A V ++M L ++V++N+++ Y R G +++A++L ++ + + ++T
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 198 LIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQD 257
L+ GF + + A+ F EM+ +G P+ T
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTF--------------------------- 422
Query: 258 SLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMVSWNSIIVGFAANGLADEA 313
N+ I MY G ++FD + L +V+WN+++ F NG+ E
Sbjct: 423 ---------NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 314 LSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVD 373
F M++ GF P+ ++ ++A S G ++ + ++ +M + P + Y ++
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLA 532
Query: 374 LYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAACRTKGEIG----LAEKVMKYLVEL 426
+R G E++ V+ M KPNE+ SLL A EIG LAE+V ++E
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE- 591
Query: 427 DPGGDSNYVLLSNIYAAVGKWDGANKVRRA---MKDRGIRKKPGFSSIEIDSSIY 478
VLL + K D + RA +K+RG P +++ SIY
Sbjct: 592 -----PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF--SPDITTLNSMVSIY 639
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 192/475 (40%), Gaps = 61/475 (12%)
Query: 37 NPNTNQSFSL-----RHNT---KHTDPTVA--WT-------------SSIAHHCRSGQLV 73
NPN+ Q S R+ T K DP + W+ S I + SGQL
Sbjct: 58 NPNSRQPISSQTSRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLD 117
Query: 74 EAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAY----ARKLGLDMND 129
S + + E + L+ L G + F + A+ +K M D
Sbjct: 118 SVLSELFEPFKDKPESTSSELLAFLKGLGFHKK-----FDLALRAFDWFMKQKDYQSMLD 172
Query: 130 VKVGTALIDMYAKSGNVDSARLVFDQMGLR------NLVSWNTMLDGYMRSGEIEDALQL 183
V +I M K G V SA +F+ GL+ ++ S+ +++ + SG +A+ +
Sbjct: 173 NSVVAIIISMLGKEGRVSSAANMFN--GLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 184 FDEFPVRNA----ISWTALIGGFVKKDHHKQALECFRE-MQLSGVAPDYVTVXXXXXXXX 238
F + I++ ++ F K + E M+ G+APD T
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML----HRTM 294
V + D V N+L+D+Y + + A +V + M+ ++
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
V++NS+I +A +G+ DEA+ N M ++G +PD +YT L+ AG ++ + IF +
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL---DVIKNMPMKPNEVVLGSLLAACRTKG 411
M+ P I + + +Y G+ E + D I + P+ V +LLA G
Sbjct: 410 MRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF---G 465
Query: 412 EIGLAEKVMKYLVELDPGG----DSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
+ G+ +V E+ G + L + Y+ G ++ A V R M D G+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 155/369 (42%), Gaps = 24/369 (6%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V + S I+ + R G L EA +M E +P+ T TLLSG + V ++
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG---FERAGKVESAMSI 406
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGL----RNLVSWNTMLDGYM 172
R G N + A I MY G +FD++ + ++V+WNT+L +
Sbjct: 407 FEEMRNAGCKPN-ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 173 RSGEIEDALQLFDEFP----VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
++G + +F E V ++ LI + + +QA+ +R M +GV PD
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDS-LKDNVRVSNSLIDMYARCGCI----EIAR 283
T V L +D K N SL+ YA I +A
Sbjct: 526 TYNTVLAALARGGMWEQSEKV--LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 284 QVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
+V+ G++ V ++++ + L EA F+ +++ GF PD + ++
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA---GRLEEALDVIKNMPMKPNEVVL 400
++ + + + MK R P + Y L+ ++SR+ G+ EE L I +KP+ +
Sbjct: 644 MVAKANGVLDYMKE-RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 702
Query: 401 GSLL-AACR 408
+++ A CR
Sbjct: 703 NTVIYAYCR 711
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 138/348 (39%), Gaps = 20/348 (5%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V W + +A ++G E + F M+ A P T TL+S + SF +
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR-----CGSFEQAM 509
Query: 117 HAYARKLGLDMN-DVKVGTALIDMYAKSGNVDSARLVFDQMG----LRNLVSWNTMLDGY 171
Y R L + D+ ++ A+ G + + V +M N +++ ++L Y
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 172 MRSGEI----EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
EI A +++ A+ L+ K D +A F E++ G +PD
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI----EIAR 283
T+ V M + ++ NSL+ M++R EI R
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDY-MKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 284 QVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
++ + ++S+N++I + N +A F+ M+ G PD ++Y + + +
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
+ +E + + M + P Y +VD Y + R +EA ++++
Sbjct: 749 MFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 95/173 (54%)
Query: 256 QDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALS 315
Q + + +++N +I M+ C I A++VFD M+ + M SW+ ++ ++ NG+ D+AL
Sbjct: 264 QSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALH 323
Query: 316 FFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLY 375
F M K G +P+ ++ AC+ G I+E F+ MK I+P+ EHY ++ +
Sbjct: 324 LFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVL 383
Query: 376 SRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDP 428
+ G L EA I+++P +P ++ R G+I L + + + +V++DP
Sbjct: 384 GKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 187/425 (44%), Gaps = 54/425 (12%)
Query: 54 DPTVAWTSSIAH-HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG------------ 100
+P + SS+ + +C ++ EA + +M E +PN +T TL+ G
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 101 -----CAHYPSPSSVSFGATVHAYARKLGLDMN--------------DVKVGTALIDMYA 141
A P ++G V+ ++ +D+ DV + T +ID
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 142 KSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAI 193
NV+ A +F +M G+R N+V++N+++ G DA +L + R N +
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
+++ALI FVK+ +A + + EM + PD T + L+
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV----SWNSIIVGFAANGL 309
+++D NV N+LI + + +E ++F M R +V ++N++I G G
Sbjct: 387 ISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG 369
D A F M +G PD ++Y+ L G +++ L +F +++ ++ P I Y
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK-SKMEPDIYTYN 504
Query: 370 CLVDLYSRAGRLEEALDVIKNMPM---KPNEVVLGSLLAA-CRTKGEIGLAEKVMKYLVE 425
+++ +AG++E+ D+ ++ + KPN ++ ++++ CR GL E+ E
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK----GLKEEADALFRE 560
Query: 426 LDPGG 430
+ G
Sbjct: 561 MKEDG 565
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 140/326 (42%), Gaps = 44/326 (13%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP---------- 105
V +T+ I C + +A + F M + PN +T +L+ +Y
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 106 -------SPSSVSFGATVHAY--------ARKLGLDM------NDVKVGTALIDMYAKSG 144
+P+ V+F A + A+ A KL +M D+ ++LI+ +
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 145 NVDSARLVFDQM----GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWT 196
+D A+ +F+ M N+V++NT++ G+ ++ +E+ ++LF E R N +++
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
LI G + A + F++M GV PD +T V + +
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE-YLQK 493
Query: 257 DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMVSWNSIIVGFAANGLADE 312
++ ++ N +I+ + G +E +F + + ++ + ++I GF GL +E
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTA 338
A + F M+++G P+ +Y + A
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 135/333 (40%), Gaps = 59/333 (17%)
Query: 105 PSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSW 164
P PS V F + A A+ D+ +I + + N+ R+ +D L S+
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDL--------VISLGERMQNL---RISYD------LYSY 118
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQL 220
N +++ + R ++ AL + + + ++ ++L+ G+ +A+ +M +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 221 SGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIE 280
P+ VT +H L L + + +LID GC
Sbjct: 179 MEYQPNTVTFNT---------------LIHGLF-----LHNKASEAVALIDRMVARGC-- 216
Query: 281 IARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
+ ++ +++ G G D ALS M+K E D V YT + A
Sbjct: 217 ----------QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 341 HAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNE 397
+ +++ L +F +M + I P + Y L+ GR +A ++ +M + PN
Sbjct: 267 NYKNVNDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 398 VVLGSLLAACRTKGEIGLAEKVMKYLVE--LDP 428
V +L+ A +G++ AEK+ +++ +DP
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 27/309 (8%)
Query: 209 KQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNS 268
++A+E ++ G A D + + VH ++ S D V N+
Sbjct: 101 REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCD-VGARNA 159
Query: 269 LIDMYARCGCIEIARQVFDGMLHRTMVSWNS-----IIVGFAANGLADEALSFFNSMQKE 323
+I+MY+ C ++ A +VF+ M WNS ++ F NG +EA+ F ++E
Sbjct: 160 IIEMYSGCCSVDDALKVFE-----EMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEE 214
Query: 324 GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEE 383
G +P+G + + C+ G + EG F M R I P +EHY + + + +G L+E
Sbjct: 215 GNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDE 274
Query: 384 ALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAA 443
AL+ ++ MPM+P+ V +L+ R G++ L ++ + + +LD
Sbjct: 275 ALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA-------------TR 321
Query: 444 VGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFE 503
+ K A V D ++K+P S S ++ V D SH + IY +L L +
Sbjct: 322 LDKVSSAGLVATKASD-FVKKEPSTRSEPYFYSTFRPV--DSSHPQMNIIYETLMSLRSQ 378
Query: 504 LQLCGYVPD 512
L+ GYVPD
Sbjct: 379 LKEMGYVPD 387
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 155/346 (44%), Gaps = 24/346 (6%)
Query: 136 LIDMYAKSGNVDSARLVFDQMG----LRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR- 190
LI + +GN+D A +FD+M L N+V++NT++DGY + +I+D +L ++
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 191 ---NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXX 247
N IS+ +I G ++ K+ EM G + D VT
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 248 WVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV----SWNSIIVG 303
+H M + L +V SLI + G + A + D M R + ++ +++ G
Sbjct: 331 VMHA-EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 304 FAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAP 363
F+ G +EA M GF P V+Y + G +++ + + MK + ++P
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE-KGLSP 448
Query: 364 RIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAA-C---RTKGEIGLA 416
+ Y ++ + R+ ++EAL V + M +KP+ + SL+ C RTK L
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 417 EKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
E++++ + P + Y L N Y G + A ++ M ++G+
Sbjct: 509 EEMLRVGL---PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 31/371 (8%)
Query: 75 AASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGT 134
A + F M E++V PN T L+ G + ++ T+ G N V T
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRG---FCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 135 ALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR 190
LID Y K +D + M L+ NL+S+N +++G R G +++ + E R
Sbjct: 246 -LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 191 ----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
+ +++ LI G+ K+ + QAL EM G+ P +T
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN---- 360
Query: 247 XWVHRLVMTQDSLK-----DNVRVSNSLIDMYARCGCI----EIARQVFDGMLHRTMVSW 297
++R + D ++ N R +L+D +++ G + + R++ D ++V++
Sbjct: 361 --MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 298 NSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
N++I G G ++A++ M+++G PD VSY+ L+ + +DE LR+ +M
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 358 VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIG 414
+ I P Y L+ + R +EA D+ + M + P+E +L+ A +G++
Sbjct: 479 -KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 415 LAEKVMKYLVE 425
A ++ +VE
Sbjct: 538 KALQLHNEMVE 548
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 162/366 (44%), Gaps = 21/366 (5%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V + + I +C+ ++ + M +EPN I+ +++G VSF V
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF---V 297
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYM 172
+ G +++V T LI Y K GN A ++ +M GL +++++ +++
Sbjct: 298 LTEMNRRGYSLDEVTYNT-LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 173 RSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
++G + A++ D+ VR N ++T L+ GF +K + +A REM +G +P V
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC----GCIEIARQ 284
T V M + L +V ++++ + R + + R+
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLE-DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGL 344
+ + + ++++S+I GF EA + M + G PD +YT + A G
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 345 IDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLG 401
+++ L++ N+M + + P + Y L++ ++ R EA ++ + + P++V
Sbjct: 536 LEKALQLHNEMVE-KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 402 SLLAAC 407
+L+ C
Sbjct: 595 TLIENC 600
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 166/413 (40%), Gaps = 80/413 (19%)
Query: 46 LRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP 105
LRH T + +TS I C++G + A +MR + PN T TL+ G +
Sbjct: 337 LRHGL--TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK- 393
Query: 106 SPSSVSFGATVHAYARKLGLDMND------VKVGTALIDMYAKSGNVDSARLVFDQMGLR 159
G AY ++ +MND V ALI+ + +G ++ A V + M +
Sbjct: 394 -------GYMNEAY--RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK 444
Query: 160 NL----VSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQA 211
L VS++T+L G+ RS ++++AL++ E + + I++++LI GF ++ K+A
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 212 LECFREM-----------------------------QL------SGVAPDYVTVXXXXXX 236
+ + EM QL GV PD VT
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNV-------RVSN-------SLIDMYARCGCIEIA 282
+ + ++S+ +V SN SLI + G + A
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624
Query: 283 RQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTA 338
QVF+ ML + ++N +I G G +A + + M K GF V+ + A
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
G ++E + + R ++ E LV++ R G ++ LDV+ M
Sbjct: 685 LHKEGKVNELNSVIVHVLRSCELS-EAEQAKVLVEINHREGNMDVVLDVLAEM 736
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 56/318 (17%)
Query: 161 LVSWNTMLDGYMRSGE-IEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECF 215
++S+N +LD +RS I A +F E N ++ LI GF + AL F
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 216 REMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYAR 275
+M+ G P+ VT N+LID Y +
Sbjct: 229 DKMETKGCLPNVVTY------------------------------------NTLIDGYCK 252
Query: 276 CGCIEIARQVFDGM----LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVS 331
I+ ++ M L ++S+N +I G G E M + G+ D V+
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 332 YTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
Y + G + L + +M R + P + Y L+ +AG + A++ + M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 392 PMK---PNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS----NYVLLSNIYAAV 444
++ PNE +L+ KG + A +V++ E++ G S Y L N +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR---EMNDNGFSPSVVTYNALINGHCVT 428
Query: 445 GKWDGANKVRRAMKDRGI 462
GK + A V MK++G+
Sbjct: 429 GKMEDAIAVLEDMKEKGL 446
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 181/416 (43%), Gaps = 55/416 (13%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V T I +C+ G+++EA S + M + + + T L++G V +
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK---NDKVDDAEEI 614
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYM 172
R G+ DV LI+ ++K GN+ A +FD+M GL N++ +N +L G+
Sbjct: 615 FREMRGKGI-APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 173 RSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD-- 226
RSGEIE A +L DE V+ NA+++ +I G+ K +A F EM+L G+ PD
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 227 -YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVS----NSLIDMYARCGCIEI 281
Y T+ V R + + K S N+LI+ + G E+
Sbjct: 734 VYTTLVDGCCRLND---------VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 282 ARQVFDGMLHRTM--------VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYT 333
+V + ++ + V++N +I G + A F+ MQ P ++YT
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 334 GALTACSHAGLIDEGLRIFNKMKRVRRIAPRIE----HYGCLVDLYSRAGRLEEALDVIK 389
L G E +F++ IA IE Y +++ + + G +AL ++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDE-----AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVD 899
Query: 390 NMPMKPNEVVLGSLL--AACRT-------KGEIGLAEKVMKYLVELDPGGDSNYVL 436
M K N V G L + CR GE+ +AEKVM+ +V L DS V+
Sbjct: 900 QMFAK-NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 143/348 (41%), Gaps = 26/348 (7%)
Query: 135 ALIDMYAKSGNVDSARLVFDQMGLRNLV----SWNTMLDGYMRSGEIEDALQLFDEFPVR 190
+LI+ Y + NV + +M RN+V ++ T++ G SG+++ A + E
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 191 ----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
N + +T LI F++ A+ +EM+ G+APD +
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD-IFCYNSLIIGLSKAKRMDE 505
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMVSWNSIIV 302
+ M ++ LK N + I Y A + M + V +I
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIA 362
+ G EA S + SM +G D +YT + +D+ IF +M R + IA
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKGIA 624
Query: 363 PRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAA-CRTKGEIGLAEK 418
P + YG L++ +S+ G +++A + M + PN ++ LL CR+ GEI EK
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS-GEI---EK 680
Query: 419 VMKYLVELDPGG----DSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
+ L E+ G Y + + Y G A ++ MK +G+
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 131/334 (39%), Gaps = 72/334 (21%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
+ S I ++ ++ EA S V M E ++PN T +SG Y S +
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG---YIEASEFASADKYV 545
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEI 177
R+ G+ N V + T LI+ Y K G V A + M
Sbjct: 546 KEMRECGVLPNKV-LCTGLINEYCKKGKVIEACSAYRSM--------------------- 583
Query: 178 EDALQLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
D+ + +A ++T L+ G K D A E FREM+ G+APD +
Sbjct: 584 ------VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY------- 630
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR----T 293
LI+ +++ G ++ A +FD M+
Sbjct: 631 -----------------------------GVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 294 MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
++ +N ++ GF +G ++A + M +G P+ V+Y + +G + E R+F+
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDV 387
+MK ++ + P Y LVD R +E A+ +
Sbjct: 722 EMK-LKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 212/475 (44%), Gaps = 60/475 (12%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYP--------- 105
TV +++ I C G++ EA RM E +P ITL L++G C +
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 106 -------SPSSVSFGATVH--------AYARKLGLDMNDVKVG------TALIDMYAKSG 144
P+ V++G + A A +L M + K+ + +ID K G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 145 NVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWT 196
++D+A +F++M ++ +++ + T++ G+ +G +D +L + R + ++++
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
ALI FVK+ ++A E +EM G++PD VT + L M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL-MVS 380
Query: 257 DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV----SWNSIIVGFAANGLADE 312
N+R N LI+ Y + I+ ++F M R +V ++N++I GF G +
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
A F M PD VSY L G ++ L IF K+++ ++ I Y ++
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK-SKMELDIGIYNIII 499
Query: 373 DLYSRAGRLEEALDVIKNMPM---KPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE--LD 427
A ++++A D+ ++P+ KP+ ++ KG + A+ + + + E
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 428 PGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVA 482
P G + +L I A +G+ D A K + +++ K+ GFS +D+S K V
Sbjct: 560 PNGCTYNIL---IRAHLGEGD-ATKSAKLIEE---IKRCGFS---VDASTVKMVV 604
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 12/281 (4%)
Query: 191 NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXX-XXXXXXXWV 249
+ ++++ LI G + +ALE M G P +T+ +
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 250 HRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFA 305
R+V T + N ++ + + G +A ++ M R + V ++ II G
Sbjct: 201 DRMVET--GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 306 ANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRI 365
+G D A + FN M+ +GF+ D + YT + +AG D+G ++ M + R+I P +
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK-RKITPDV 317
Query: 366 EHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKGEIGLAEKVMKY 422
+ L+D + + G+L EA ++ K M + P+ V SL+ + ++ A ++
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 423 LVELDPGGD-SNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
+V G + + +L N Y D ++ R M RG+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 170/386 (44%), Gaps = 56/386 (14%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V +T I C + +L A F +M+ +P+ +T ITLL + SV
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK---Q 349
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNV----DSARLVFDQMGLRNLVSWNTMLDGY 171
+ K G + DV T L+D K+GN D+ ++ DQ L NL ++NT++ G
Sbjct: 350 FWSEMEKDG-HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 172 MRSGEIEDALQLF---DEFPVR-NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
+R ++DAL+LF + V+ A ++ I + K ALE F +M+ G+AP
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP-- 466
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
N+ N+ + A+ G A+Q+F
Sbjct: 467 ----------------------------------NIVACNASLYSLAKAGRDREAKQIFY 492
Query: 288 GM----LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
G+ L V++N ++ ++ G DEA+ + M + G EPD + + A
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVL 400
+DE ++F +MK + ++ P + Y L+ + G+++EA+++ + M K PN +
Sbjct: 553 RVDEAWKMFMRMKEM-KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 401 GSLLAACRTKGEIGLAEKVMKYLVEL 426
+L E+ LA K++ ++++
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDM 637
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 182/456 (39%), Gaps = 46/456 (10%)
Query: 39 NTNQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLL 98
+ Q +S H V +T + C++G EA T MR+ + PN T TL+
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 99 SGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGT--------ALIDMYAKSGNVDSAR 150
G VH L L N +G ID Y KSG+ SA
Sbjct: 406 CGLLR------------VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 151 LVFDQMGLR----NLVSWNTMLDGYMRSGEIEDALQLF----DEFPVRNAISWTALIGGF 202
F++M + N+V+ N L ++G +A Q+F D V +++++ ++ +
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 203 VKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDN 262
K +A++ EM +G PD V V W + M + LK
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPD-VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 263 VRVSNSLIDMYARCGCIEIARQVFDGMLHR----TMVSWNSIIVGFAANGLADEALSFFN 318
V N+L+ + G I+ A ++F+GM+ + +++N++ N AL
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 319 SMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
M G PD +Y + G + E + F++MK++ + P L+ +A
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVVKA 690
Query: 379 GRLEEALDVIKNMPM----KPN----EVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGG 430
+E+A +I N +P E ++GS+LA + +E+++ + D G
Sbjct: 691 SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD--G 748
Query: 431 DSNYVLLSNIYAAVGKWDGANKV-RRAMKDRGIRKK 465
DS V + GA + + KD G++ K
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 150/379 (39%), Gaps = 57/379 (15%)
Query: 63 IAHHCRSGQLVEAASTFVRM-REAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYAR 121
I + C+ + A + F + ++ V+P T L+ G + V +
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE---ADMIEIAQDVFLQVK 812
Query: 122 KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEI 177
G + DV L+D Y KSG +D ++ +M N ++ N ++ G +++G +
Sbjct: 813 STGC-IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 178 EDALQLF-DEFPVRN----AISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
+DAL L+ D R+ A ++ LI G K +A + F M G P
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP------- 924
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
N + N LI+ + + G + A +F M+
Sbjct: 925 -----------------------------NCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 293 ----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
+ +++ ++ G DE L +F +++ G PD V Y + + ++E
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDV---IKNMPMKPNEVVLGSLLA 405
L +FN+MK R I P + Y L+ AG +EEA + I+ ++PN +L+
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 406 ACRTKGEIGLAEKVMKYLV 424
G+ A V + +V
Sbjct: 1076 GYSLSGKPEHAYAVYQTMV 1094
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 173/436 (39%), Gaps = 24/436 (5%)
Query: 46 LRHNTKHTDPTVA-WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAH 103
+R PTV + + +A ++G++ EA F M + PN IT TL C +
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 104 YPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMG---LRN 160
V+ + +G + DV +I K+G V A F QM +
Sbjct: 622 ----DEVTLALKMLFKMMDMGC-VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPD 676
Query: 161 LVSWNTMLDGYMRSGEIEDALQLFDEFPVRNA-----ISWTALIGGFVKKDHHKQALECF 215
V+ T+L G +++ IEDA ++ F A + W LIG + + A+
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS 736
Query: 216 REMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQD-SLKDNVRVSNSLIDMYA 274
+ +G+ D ++ T+D ++ + N LI
Sbjct: 737 ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 275 RCGCIEIARQVFDGMLHRTMV----SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGV 330
IEIA+ VF + + ++N ++ + +G DE + M E + +
Sbjct: 797 EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856
Query: 331 SYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKN 390
++ ++ AG +D+ L ++ + R +P YG L+D S++GRL EA + +
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 391 M---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGD-SNYVLLSNIYAAVGK 446
M +PN + L+ GE A + K +V+ D Y +L + VG+
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 447 WDGANKVRRAMKDRGI 462
D + +K+ G+
Sbjct: 977 VDEGLHYFKELKESGL 992
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 130/316 (41%), Gaps = 40/316 (12%)
Query: 42 QSFSLRHNTKHTDPTVA-WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG 100
Q L+ + P VA + + + +SG++ E + M E E N IT ++SG
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 101 CA-----------HYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSA 149
+Y S F T Y LID +KSG + A
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYG--------------PLIDGLSKSGRLYEA 910
Query: 150 RLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNAI-----SWTALIG 200
+ +F+ M G R N +N +++G+ ++GE + A LF V+ + +++ L+
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM-VKEGVRPDLKTYSVLVD 969
Query: 201 GFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLK 260
+ L F+E++ SG+ PD V + + T +
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMVSWNSIIVGFAANGLADEALSF 316
++ NSLI G +E A ++++ + L + ++N++I G++ +G + A +
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 317 FNSMQKEGFEPDGVSY 332
+ +M GF P+ +Y
Sbjct: 1090 YQTMVTGGFSPNTGTY 1105
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 159/359 (44%), Gaps = 20/359 (5%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGA 114
TV + + + C ++ EA RM E +P ITL TL++G C + VS
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN----GKVSDAV 213
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSWNTMLDG 170
+ + G N+V G L ++ KSG A + +M RN+ V ++ ++DG
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVL-NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 171 YMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+ G +++A LF+E ++ + I++ LIGGF + R+M ++P+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
VT + + +M Q + N NSLID + + +E A Q+
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 287 DGMLHR----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
D M+ + ++++N +I G+ D+ L F M G + V+Y + +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLG 401
G ++ ++F +M RR+ P I Y L+D G LE+AL++ + E+ +G
Sbjct: 452 GKLEVAKKLFQEMVS-RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 165/355 (46%), Gaps = 18/355 (5%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS 111
H + + + C +G++ +A RM E +PN +T +L+ ++++
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK-SGQTALA 247
Query: 112 FGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTM 167
R + LD + +ID K G++D+A +F++M ++ +++++NT+
Sbjct: 248 MELLRKMEERNIKLDAVKYSI---IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 168 LDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
+ G+ +G +D +L + R N ++++ LI FVK+ ++A + +EM G+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
AP+ +T + L++++ D + N LI+ Y + I+
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD-IMTFNILINGYCKANRIDDGL 423
Query: 284 QVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
++F M R + V++N+++ GF +G + A F M PD VSY L
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
G +++ L IF K+++ ++ I Y ++ A ++++A D+ ++P+K
Sbjct: 484 CDNGELEKALEIFGKIEK-SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 188/438 (42%), Gaps = 45/438 (10%)
Query: 28 QANPTFSPYNPNTNQSFSLRHNTKHTDPTVAW-----TSSIAH-----------HCRSGQ 71
Q+ P P + N+ FS TK + +A + IAH CR +
Sbjct: 81 QSRPL--PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRK 138
Query: 72 LVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGATVHAYARKLGLDMNDV 130
L A ST ++ + EP+ + TLL+G C ++ + K L +
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL----I 194
Query: 131 KVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLFDE 186
+ T L++ +G V A ++ D+M G + N V++ +L+ +SG+ A++L +
Sbjct: 195 TLNT-LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 187 FPVRN----AISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXX 242
RN A+ ++ +I G K A F EM++ G D +T
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 243 XXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWN 298
+ R M + + NV + LID + + G + A Q+ M+ R + +++N
Sbjct: 314 WDDGAKLLR-DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 299 SIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRV 358
S+I GF +EA+ + M +G +PD +++ + A ID+GL +F +M +
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS-L 431
Query: 359 RRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGL 415
R + Y LV + ++G+LE A + + M ++P+ V LL GE+
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 416 A----EKVMKYLVELDPG 429
A K+ K +ELD G
Sbjct: 492 ALEIFGKIEKSKMELDIG 509
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 129/316 (40%), Gaps = 55/316 (17%)
Query: 162 VSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFRE 217
V +NT+L+G + +AL+L D I+ L+ G A+
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 218 MQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG 277
M +G P+ VT ++++ + G
Sbjct: 219 MVETGFQPNEVTY------------------------------------GPVLNVMCKSG 242
Query: 278 CIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYT 333
+A ++ M R + V ++ II G +G D A + FN M+ +GF+ D ++Y
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 334 GALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPM 393
+ +AG D+G ++ M + R+I+P + + L+D + + G+L EA ++K M
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIK-RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 394 K---PNEVVLGSLLAA-CRTKGEIGLAEKVMKYLVELDPGGDSN---YVLLSNIYAAVGK 446
+ PN + SL+ C+ E L E + + + G D + + +L N Y +
Sbjct: 362 RGIAPNTITYNSLIDGFCK---ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 447 WDGANKVRRAMKDRGI 462
D ++ R M RG+
Sbjct: 419 IDDGLELFREMSLRGV 434
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 132/323 (40%), Gaps = 17/323 (5%)
Query: 153 FDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEF----PVRNAISWTALIGGFVKKDHH 208
F RNL S+ L + + +DA+ LF + P+ I + L K +
Sbjct: 46 FSTFSDRNL-SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104
Query: 209 KQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNS 268
+ L ++M+ G+A T+ +M D V +
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 269 LIDMYARCGCIEIARQVFDGML---HR-TMVSWNSIIVGFAANGLADEALSFFNSMQKEG 324
L + C E A ++ D M+ H+ T+++ N+++ G NG +A+ + M + G
Sbjct: 165 LNGLCLECRVSE-ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 325 FEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
F+P+ V+Y L +G + + KM+ R I Y ++D + G L+ A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE-RNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 385 LDVIKNMPM---KPNEVVLGSLLAACRTKGEIGLAEKVMKYLV--ELDPGGDSNYVLLSN 439
++ M + K + + +L+ G K+++ ++ ++ P + VL+ +
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 440 IYAAVGKWDGANKVRRAMKDRGI 462
+ GK A+++ + M RGI
Sbjct: 343 -FVKEGKLREADQLLKEMMQRGI 364
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 23/365 (6%)
Query: 63 IAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGATVHAYAR 121
I C Q+ A S +M + EP+ +T+ +L++G C +VS +
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 122 KLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEI 177
K D+ A+ID K+ V+ A F ++ G+R N+V++ +++G S
Sbjct: 187 K-----PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 178 EDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXX 233
DA +L + + N I+++AL+ FVK +A E F EM + PD VT
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 234 XXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT 293
+ L++++ L D V N+LI+ + + +E ++F M R
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSY-NTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 294 MVS----WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGL 349
+VS +N++I GF G D+A FF+ M G PD +Y L G +++ L
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 350 RIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAA 406
IF M++ R + I Y ++ + G++EEA + ++ +KP+ V ++++
Sbjct: 421 VIFEDMQK-REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 407 CRTKG 411
TKG
Sbjct: 480 LCTKG 484
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 151/345 (43%), Gaps = 81/345 (23%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP----------- 105
VA+ + I C++ ++ +A F + + PN +T L++G +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 106 ------SPSSVSFGATVHAYAR---------------KLGLDMNDVKVGTALIDMYAKSG 144
+P+ +++ A + A+ + ++ +D D+ ++LI+
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLINGLCLHD 309
Query: 145 NVDSARLVFDQM----GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWT 196
+D A +FD M L ++VS+NT+++G+ ++ +ED ++LF E R N +++
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
LI GF + +A E F +M G++PD W + +++
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDI--------------------WTYNILL-- 407
Query: 257 DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADE 312
L DN G +E A +F+ M R M V++ ++I G G +E
Sbjct: 408 GGLCDN--------------GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR 357
A S F S+ +G +PD V+YT ++ GL+ E ++ KMK+
Sbjct: 454 AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 160/339 (47%), Gaps = 19/339 (5%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
C+S Q A+S +M + EP+ +T +L++G + + + ++ ++G+
Sbjct: 118 CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLING---FCLGNRMEEAMSMVNQMVEMGIK 174
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQ 182
DV + T +ID K+G+V+ A +FDQM G+R ++V + ++++G SG DA
Sbjct: 175 -PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 183 LFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
L R + I++ ALI FVK+ A E + EM +AP+ T
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM---- 294
+ L+ T+ D V + SLI+ + +C ++ A ++F M + +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYT-SLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
+++ ++I GF G + A F+ M G P+ +Y L + G + + L IF
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 355 MKR--VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
M++ + +AP I Y L+ G+LE+AL V ++M
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 149/346 (43%), Gaps = 45/346 (13%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP---------- 105
V +T+ I C++G + A S F +M + P+ + +L++G +
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 106 -------SPSSVSFGATVHAY--------ARKLGLDMNDVKVG------TALIDMYAKSG 144
P ++F A + A+ A +L +M + + T+LI+ + G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 145 NVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWT 196
VD AR +F M + ++V++ ++++G+ + +++DA+++F E + N I++T
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
LI GF + A E F M GV P+ T + + +
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 257 --DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLA 310
D + N+ N L+ G +E A VF+ M R M +++ II G G
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 311 DEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
A++ F S+ +G +P+ V+YT ++ GL E +F KMK
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 148/335 (44%), Gaps = 18/335 (5%)
Query: 69 SGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMN 128
S Q EA F M E+ P+ I LL+ A V + + + +G+ +
Sbjct: 50 SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVV---INLCDHLQIMGVS-H 105
Query: 129 DVKVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLF 184
D+ L++ + +S A +M G ++V++ ++++G+ +E+A+ +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 185 D---EFPVR-NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXX 240
+ E ++ + + +T +I K H AL F +M+ G+ PD V
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 241 XXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV----S 296
+ R MT+ +K +V N+LID + + G A ++++ M+ ++ +
Sbjct: 226 GRWRDADSLLR-GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
+ S+I GF G DEA F M+ +G PD V+YT + +D+ ++IF +M
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
+ + + Y L+ + + G+ A +V +M
Sbjct: 345 Q-KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 42 QSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGC 101
Q F L VA+TS I C+ ++ +A F M + + N IT TL+ G
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 102 AHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR-- 159
P +V+ H +R G+ N ++ L+ +G V A ++F+ M R
Sbjct: 363 GQVGKP-NVAQEVFSHMVSR--GVPPN-IRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 160 -----NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRN----AISWTALIGGFVKKDHHKQ 210
N+ ++N +L G +G++E AL +F++ R I++T +I G K K
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 211 ALECFREMQLSGVAPDYVT 229
A+ F + GV P+ VT
Sbjct: 479 AVNLFCSLPSKGVKPNVVT 497
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 181/406 (44%), Gaps = 67/406 (16%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + + I C+ + +A + F M + P+ T +L+S +Y S S
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS---- 313
Query: 116 VHAYARKLGLDMNDVKVG------TALIDMYAKSGNVDSARLVFDQMGLR----NLVSWN 165
+L DM + K+ +ALID + K G + A ++D+M R ++ +++
Sbjct: 314 ------RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 166 TMLDGYMRSGEIEDALQLF------DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
++++G+ +++A +F D FP N ++++ LI GF K ++ +E FREM
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFP--NVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G+ + VT +H +D DN ++
Sbjct: 426 QRGLVGNTVT---------------YTTLIHGFFQARDC--DNAQM-------------- 454
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
+ +Q+ +H ++++N ++ G NG +A+ F +Q+ EPD +Y +
Sbjct: 455 -VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM----PMKP 395
AG +++G +F + ++ ++P + Y ++ + R G EEA ++K M P+ P
Sbjct: 514 CKAGKVEDGWELFCNLS-LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-P 571
Query: 396 NEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV-LLSNI 440
N +L+ A G+ + +++K + GD++ + L++N+
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 169/385 (43%), Gaps = 29/385 (7%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
++ I CR QL A + +M + EP+ +TL +LL+G H +S +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH---SKRISDAVALV 176
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMR 173
++G + T + ++ + ++ LV DQM R +LV++ T+++G +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV-DQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 174 SGEIEDALQLFDEFPV----RNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
G+I+ AL L + + + + +I G K H AL F EM G+ PD T
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 230 VXXXXXXXXXXXXXXXXXW--VHRLV--MTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
W RL+ M + + NV ++LID + + G + A ++
Sbjct: 296 -----YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 286 FDGMLHRT----MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
+D M+ R+ + +++S+I GF + DEA F M + P+ V+Y+ +
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 342 AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEV 398
A ++EG+ +F +M + R + Y L+ + +A + A V K M + PN +
Sbjct: 411 AKRVEEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 399 VLGSLLAACRTKGEIGLAEKVMKYL 423
LL G++ A V +YL
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYL 494
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 182/422 (43%), Gaps = 49/422 (11%)
Query: 54 DPTVAWTSSIAH-HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP------- 105
+P + SS+ + +C S ++ +A + +M E +P+ T TL+ G +
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 106 ----------SPSSVSFGATVHAYARKLGLDM--------------NDVKVGTALIDMYA 141
P V++G V+ ++ +D+ DV + +ID
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 142 KSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAI 193
K ++D A +F +M G+R ++ ++++++ G DA +L + R N +
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
+++ALI FVK+ +A + + EM + PD T + L+
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGL 309
+++D NV ++LI + + +E ++F M R + V++ ++I GF
Sbjct: 390 ISKDCFP-NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG 369
D A F M G P+ ++Y L G + + + +F ++R + P I Y
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR-STMEPDIYTYN 507
Query: 370 CLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
+++ +AG++E+ ++ N+ +K PN + ++++ KG A+ ++K + E
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 427 DP 428
P
Sbjct: 568 GP 569
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 124/300 (41%), Gaps = 16/300 (5%)
Query: 176 EIEDALQLFDEF----PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
+++DA+ LF + P + + + L+ K + + + +MQ G++ D T
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
V +M D V +S SL++ Y I A + D M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS-SLLNGYCHSKRISDAVALVDQMVE 181
Query: 292 R----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE 347
++ ++I G + A EA++ + M + G +PD V+Y + G ID
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 348 GLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLL 404
L + KM++ +I + Y ++D + +++AL++ M ++P+ SL+
Sbjct: 242 ALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 405 AACRTKGEIGLAEKVMKYLVE--LDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
+ G A +++ ++E ++P + L + + GK A K+ M R I
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNV-VTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 33/321 (10%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V +++ I C+ +A + F M V PN IT +L+S +Y S S
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS---- 315
Query: 116 VHAYARKLGLDMNDVKVG------TALIDMYAKSGNVDSARLVFDQMGLR----NLVSWN 165
+L DM + K+ ALID + K G + A ++D+M R ++ +++
Sbjct: 316 ------RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 166 TMLDGYMRSGEIEDALQLF------DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
++++G+ +++A +F D FP N +++ LI GF K + +E FREM
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFP--NVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G+ + VT V + M D + N+ N+L+D + G +
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK-QMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 280 EIARQVFDGM----LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
E A VF+ + + T+ ++N +I G G ++ F S+ +G +PD + Y
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 336 LTACSHAGLIDEGLRIFNKMK 356
++ GL +E +F KM+
Sbjct: 547 ISGFCRKGLKEEADALFRKMR 567
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 168/376 (44%), Gaps = 29/376 (7%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
CR Q+ A + +M + EP+ +TL +LL+G H +S + ++G
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH---GKRISDAVALVDQMVEMGYR 187
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDALQ 182
+ + T + ++ + ++ LV D+M R NLV++ +++G + G+I+ A
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALV-DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 183 LFDEFPV----RNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
L ++ N + ++ +I K H AL F EM+ GV P+ +T
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT-----YSSL 301
Query: 239 XXXXXXXXXW--VHRLV--MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT- 293
W RL+ M + + NV N+LID + + G + A +++D M+ R+
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 294 ---MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+ +++S+I GF + DEA F M + P+ V+Y + A IDEG+
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAAC 407
+F +M + R + Y L+ + +A + A V K M + PN + +LL
Sbjct: 422 LFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 408 RTKGEIGLAEKVMKYL 423
G++ A V +YL
Sbjct: 481 CKNGKLEKAMVVFEYL 496
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 188/426 (44%), Gaps = 49/426 (11%)
Query: 54 DPTVAWTSSIAH-HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP------- 105
+P++ SS+ + +C ++ +A + +M E P+ IT TL+ G +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 106 ----------SPSSVSFGATVHAYARKLGLDM--------------NDVKVGTALIDMYA 141
P+ V++G V+ ++ +D+ +V + + +ID
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 142 KSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAI 193
K + D A +F +M G+R N++++++++ DA +L + R N +
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
++ ALI FVK+ +A + + EM + PD T + L+
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGL 309
+++D NV N+LI+ + + I+ ++F M R + V++ ++I GF
Sbjct: 392 ISKDCFP-NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG 369
D A F M +G P+ ++Y L G +++ + +F ++R ++ P I Y
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKMEPTIYTYN 509
Query: 370 CLVDLYSRAGRLEEALDVIKNMPM---KPNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
+++ +AG++E+ D+ ++ + KP+ ++ ++++ KG A+ + + + E
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 427 DPGGDS 432
P DS
Sbjct: 570 GPLPDS 575
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 169/400 (42%), Gaps = 59/400 (14%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP------------ 105
++ I CR QL A + +M + EPN +TL +LL+G H
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 106 -----SPSSVSFGATVHAYARKLGLDM-NDVKVGTALID-MYAKSGNVDSARLVFDQMGL 158
P++V+F +H GL + N ALID M AK D
Sbjct: 178 FVTGYQPNTVTFNTLIH------GLFLHNKASEAMALIDRMVAKGCQPD----------- 220
Query: 159 RNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRN----AISWTALIGGFVKKDHHKQALEC 214
LV++ +++G + G+ + A L ++ + + +I G K H AL
Sbjct: 221 --LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 215 FREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXW--VHRLV--MTQDSLKDNVRVSNSLI 270
F+EM+ G+ P+ VT W RL+ M + + +V ++LI
Sbjct: 279 FKEMETKGIRPNVVT-----YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 271 DMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFE 326
D + + G + A +++D M+ R++ V+++S+I GF + DEA F M +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 327 PDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALD 386
PD V+Y + ++EG+ +F +M + R + Y L+ +AG + A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 387 VIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
+ K M + PN + +LL G++ A V +YL
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 189/422 (44%), Gaps = 62/422 (14%)
Query: 39 NTNQSFSLRHNTKH--TDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLI 95
+T+ +F+L + + +P V + + I C+ + +A + F M + PN +T
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 96 TLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQ 155
+L+S +Y S S RK+ DV +ALID + K G + A ++D+
Sbjct: 296 SLISCLCNYGRWSDAS-RLLSDMIERKIN---PDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 156 MGLRNL----VSWNTMLDGYMRSGEIEDALQLFDEFPVR-----NAISWTALIGGFVKKD 206
M R++ V+++++++G+ +++A Q+F EF V + +++ LI GF K
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 207 HHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVS 266
++ +E FREM G+ + VT
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTY------------------------------------ 434
Query: 267 NSLIDMYARCGCIEIARQVFDGMLHR----TMVSWNSIIVGFAANGLADEALSFFNSMQK 322
N LI + G ++A+++F M+ ++++N+++ G NG ++A+ F +Q+
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLE 382
EP +Y + AG +++G +F + ++ + P + Y ++ + R G E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS-LKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 383 EALDVIKNMP---MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV-LLS 438
EA + K M PN +L+ A G+ + +++K + GD++ + L++
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613
Query: 439 NI 440
N+
Sbjct: 614 NM 615
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 181/419 (43%), Gaps = 49/419 (11%)
Query: 54 DPTVAWTSSIAH-HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG------------ 100
+P + SS+ + +C S ++ EA + +M +PN +T TL+ G
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 101 -----CAHYPSPSSVSFGATVHAYARKLGLD-----MNDVKVG---------TALIDMYA 141
A P V++G V+ ++ D +N ++ G +ID
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 142 KSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAI 193
K ++D A +F +M G+R N+V++++++ G DA +L + R +
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
+++ALI FVK+ +A + + EM + P VT + +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGL 309
+++ D V N+LI + + +E +VF M R + V++N +I G G
Sbjct: 388 VSKHCFPD-VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG 369
D A F M +G P+ ++Y L G +++ + +F ++R ++ P I Y
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKMEPTIYTYN 505
Query: 370 CLVDLYSRAGRLEEALDVIKNMPM---KPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE 425
+++ +AG++E+ D+ N+ + KP+ V ++++ KG A+ + K + E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 176/418 (42%), Gaps = 59/418 (14%)
Query: 51 KHTDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG---CAHYPS 106
K P V +T++I C+ G++ EA F +M EA V PN +T T++ G C Y
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 107 --------------PSSVSFGATVHAYAR---------------KLGLDMNDVKVGTALI 137
P+ +++ V R K G N V V LI
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN-VIVYNNLI 372
Query: 138 DMYAKSGNVDSARLVFDQMGLRNLV----SWNTMLDGYMRSGEIEDALQLFDE-----FP 188
D + ++G+++ A + D M + L ++NT++ GY ++G+ ++A +L E F
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 189 VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD--YVTVXXXXXXXXXXXXXXXX 246
V N S+T++I AL EM L ++P +T
Sbjct: 433 V-NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV----SWNSIIV 302
W L + R SN+L+ G ++ A ++ +L R V S+N++I
Sbjct: 492 LWFQFL---NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIA 362
G DEA F + M K G +PD +Y+ + + ++E ++ ++ KR +
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR-NGML 607
Query: 363 PRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAA-CRTKGEIGLA 416
P + Y ++D +A R EE + M K PN VV L+ A CR+ G + +A
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS-GRLSMA 664
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 155/357 (43%), Gaps = 34/357 (9%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFV-RMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGAT 115
++TS I C S + ++A FV M + P L TL+SG C H
Sbjct: 437 SFTSVICLLC-SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK---------- 485
Query: 116 VHAYARKLGLD------MNDVKVGTALIDMYAKSGNVDSA-RLVFDQMG---LRNLVSWN 165
H+ A +L + D + AL+ ++G +D A R+ + +G + + VS+N
Sbjct: 486 -HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLS 221
T++ G ++++A DE R + +++ LI G + ++A++ + + + +
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604
Query: 222 GVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEI 281
G+ PD T +M+++ ++ N V N LI Y R G + +
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLSM 663
Query: 282 ARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALT 337
A ++ + M H+ + ++ S+I G + +EA F M+ EG EP+ YT +
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
G + + + +M + + P Y ++ Y+R G + EA ++ M K
Sbjct: 724 GYGKLGQMVKVECLLREMHS-KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 123/288 (42%), Gaps = 52/288 (18%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V++ + I+ C +L EA M + ++P+N T L+ G + + V
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM---NKVEEAIQF 597
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSWNTMLDGYM 172
++ G+ + DV + +ID K+ + + FD+M +N+ V +N ++ Y
Sbjct: 598 WDDCKRNGM-LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Query: 173 RSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
RSG + AL+L ++ + N+ ++T+LI G ++A F EM++ G+ P
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP--- 713
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIE----IARQ 284
NV +LID Y + G + + R+
Sbjct: 714 ---------------------------------NVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSY 332
+ +H +++ +I G+A +G EA N M+++G PD ++Y
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 42 QSFSLRHNTKHTDP-TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG 100
Q F +K+ P TV + I +CRSG+L A M+ + PN+ T +L+ G
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 101 CAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRN 160
+ S V + R GL+ N V TALID Y K G + + +M +N
Sbjct: 690 MSII---SRVEEAKLLFEEMRMEGLEPN-VFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 161 L----VSWNTMLDGYMRSGEIEDALQLFDEFP----VRNAISWTALIGGFVKK 205
+ +++ M+ GY R G + +A +L +E V ++I++ I G++K+
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 176/418 (42%), Gaps = 59/418 (14%)
Query: 51 KHTDPTV-AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG---CAHYPS 106
K P V +T++I C+ G++ EA F +M EA V PN +T T++ G C Y
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 107 --------------PSSVSFGATVHAYAR---------------KLGLDMNDVKVGTALI 137
P+ +++ V R K G N V V LI
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN-VIVYNNLI 372
Query: 138 DMYAKSGNVDSARLVFDQMGLRNLV----SWNTMLDGYMRSGEIEDALQLFDE-----FP 188
D + ++G+++ A + D M + L ++NT++ GY ++G+ ++A +L E F
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 189 VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD--YVTVXXXXXXXXXXXXXXXX 246
V N S+T++I AL EM L ++P +T
Sbjct: 433 V-NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV----SWNSIIV 302
W L + R SN+L+ G ++ A ++ +L R V S+N++I
Sbjct: 492 LWFQFL---NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIA 362
G DEA F + M K G +PD +Y+ + + ++E ++ ++ KR +
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR-NGML 607
Query: 363 PRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAA-CRTKGEIGLA 416
P + Y ++D +A R EE + M K PN VV L+ A CR+ G + +A
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS-GRLSMA 664
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 155/357 (43%), Gaps = 34/357 (9%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFV-RMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGAT 115
++TS I C S + ++A FV M + P L TL+SG C H
Sbjct: 437 SFTSVICLLC-SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK---------- 485
Query: 116 VHAYARKLGLD------MNDVKVGTALIDMYAKSGNVDSA-RLVFDQMG---LRNLVSWN 165
H+ A +L + D + AL+ ++G +D A R+ + +G + + VS+N
Sbjct: 486 -HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLS 221
T++ G ++++A DE R + +++ LI G + ++A++ + + + +
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604
Query: 222 GVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEI 281
G+ PD T +M+++ ++ N V N LI Y R G + +
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLSM 663
Query: 282 ARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALT 337
A ++ + M H+ + ++ S+I G + +EA F M+ EG EP+ YT +
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 338 ACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
G + + + +M + + P Y ++ Y+R G + EA ++ M K
Sbjct: 724 GYGKLGQMVKVECLLREMHS-KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 123/288 (42%), Gaps = 52/288 (18%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATV 116
V++ + I+ C +L EA M + ++P+N T L+ G + + V
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM---NKVEEAIQF 597
Query: 117 HAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSWNTMLDGYM 172
++ G+ + DV + +ID K+ + + FD+M +N+ V +N ++ Y
Sbjct: 598 WDDCKRNGM-LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Query: 173 RSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
RSG + AL+L ++ + N+ ++T+LI G ++A F EM++ G+ P
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP--- 713
Query: 229 TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIE----IARQ 284
NV +LID Y + G + + R+
Sbjct: 714 ---------------------------------NVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 285 VFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSY 332
+ +H +++ +I G+A +G EA N M+++G PD ++Y
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 42 QSFSLRHNTKHTDP-TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG 100
Q F +K+ P TV + I +CRSG+L A M+ + PN+ T +L+ G
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 101 CAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRN 160
+ S V + R GL+ N V TALID Y K G + + +M +N
Sbjct: 690 MSII---SRVEEAKLLFEEMRMEGLEPN-VFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 161 L----VSWNTMLDGYMRSGEIEDALQLFDEFP----VRNAISWTALIGGFVKK 205
+ +++ M+ GY R G + +A +L +E V ++I++ I G++K+
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 194/429 (45%), Gaps = 26/429 (6%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V ++S+I + +SG L A+ + RM + PN +T L+ G +FG
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE-AFG-- 412
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFD---QMGLR-NLVSWNTMLDGY 171
++ K G++ + V ++LID + K GN+ S +++ +MG ++V + ++DG
Sbjct: 413 MYGQILKRGMEPSIVTY-SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 172 MRSGEIEDAL----QLFDEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD- 226
+ G + A+ ++ + N + + +LI G+ + + +AL+ FR M + G+ PD
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 227 --YVTVXXXXXXXXXXXXXXXXXWVHRL--VMTQDSLKDNVRVSNSLIDMYARCGCIEIA 282
+ TV +L +M ++ + ++ V N +I + +C IE A
Sbjct: 532 ATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 591
Query: 283 RQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTA 338
+ F+ ++ M V++N++I G+ + DEA F ++ F P+ V+ T +
Sbjct: 592 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 651
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---P 395
+D +R+F+ M + P YGCL+D +S++ +E + + + M K P
Sbjct: 652 LCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 396 NEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGD-SNYVLLSNIYAAVGKWDGANKVR 454
+ V ++ +G + A + ++ D Y +L Y VG+ A +
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770
Query: 455 RAMKDRGIR 463
M G++
Sbjct: 771 EHMLRNGVK 779
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 184/426 (43%), Gaps = 59/426 (13%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + + I C+ G++ A F M + +EP+ I TL+ G Y + G
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG---YFKAGMLGMGHK 342
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGY 171
+ + A G+ + DV V ++ ID+Y KSG++ +A +V+ +M + N+V++ ++ G
Sbjct: 343 LFSQALHKGVKL-DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 172 MRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
+ G I +A ++ + R + +++++LI GF K + + + +M G PD
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD- 460
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
V + + M S++ NV V NSLID + R
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR------------ 508
Query: 288 GMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTA-------CS 340
L+R DEAL F M G +PD ++T + C
Sbjct: 509 --LNRF-----------------DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 341 HAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNE 397
H GL++F+ M+R +I+ I ++ L + R+E+A N+ M+P+
Sbjct: 550 HMK-PTIGLQLFDLMQR-NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 398 VVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVL--LSNIYAAVGKWDGANKVRR 455
V +++ + + AE++ + L+++ P G + L L ++ DGA ++
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 456 AMKDRG 461
M ++G
Sbjct: 667 IMAEKG 672
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 22/276 (7%)
Query: 124 GLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQL 183
GL ++ ++V + L+ LV D N+V++ T+++G+ + GE++ A L
Sbjct: 261 GLSVDQIEVASRLLS------------LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 184 FDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXX 239
F R + I+++ LI G+ K + F + GV D V
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 240 XXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----V 295
V++ ++ Q + NV LI + G I A ++ +L R M V
Sbjct: 369 SGDLATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+++S+I GF G + + M K G+ PD V Y + S GL+ +R KM
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
+ I + + L+D + R R +EAL V + M
Sbjct: 488 LG-QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT- 115
V + + I +C +L EA F ++ PN +TL L+ H ++ GA
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI----HVLCKNNDMDGAIR 663
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGY 171
+ + + G N V G L+D ++KS +++ + +F++M + ++VS++ ++DG
Sbjct: 664 MFSIMAEKGSKPNAVTYG-CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 722
Query: 172 MRSGEIEDALQLF----DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+ G +++A +F D + + +++ LI G+ K +A + M +GV PD
Sbjct: 723 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 261 DNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSM 320
D + V++ L+ + CG +V++ ++I GF G D A F M
Sbjct: 265 DQIEVASRLLSLVLDCGPAP------------NVVTFCTLINGFCKRGEMDRAFDLFKVM 312
Query: 321 QKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGR 380
++ G EPD ++Y+ + AG++ G ++F++ + + + + +D+Y ++G
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH-KGVKLDVVVFSSTIDVYVKSGD 371
Query: 381 LEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEI----GLAEKVMK 421
L A V K M + PN V L+ G I G+ +++K
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 191/434 (44%), Gaps = 49/434 (11%)
Query: 54 DPTVAWTSSIAH-HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP------- 105
+P + SS+ + +C S ++ +A + +M E +P+ T TL+ G +
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 106 ----------SPSSVSFGATVHAYARKLGLDMN--------------DVKVGTALIDMYA 141
P V++G V+ ++ +D+ +V + +ID
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 142 KSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAI 193
K +V+ A +F +M G+R N+V++N++++ G DA +L + N +
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 194 SWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV 253
++ ALI F K+ +A + EM + PD +T + + +
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV----SWNSIIVGFAANGL 309
+++D L N++ N+LI+ + +C +E ++F M R +V ++ +II GF G
Sbjct: 390 VSKDCLP-NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG 369
D A F M D ++Y+ L G +D L IF +++ + I Y
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK-SEMELNIFIYN 507
Query: 370 CLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE---L 426
+++ +AG++ EA D+ ++ +KP+ V ++++ +K + A+ + + + E L
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 427 DPGGDSNYVLLSNI 440
G N ++ +N+
Sbjct: 568 PNSGTYNTLIRANL 581
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 172/385 (44%), Gaps = 29/385 (7%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
++ I CR QL A + +M + EP+ +TL +LL+G H +S +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH---SKRISDAVALV 176
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMR 173
++G + T + ++ + ++ LV DQM R +LV++ T+++G +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV-DQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 174 SGEIEDALQLFDEFPV----RNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
G+I+ AL L ++ N + + +I K H + A++ F EM+ G+ P+ VT
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 230 VXXXXXXXXXXXXXXXXXW--VHRLV--MTQDSLKDNVRVSNSLIDMYARCGCIEIARQV 285
W RL+ M + + NV N+LID + + G + A ++
Sbjct: 296 -----YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 286 FDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
+ M+ R++ +++N +I GF + DEA F M + P+ +Y +
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 342 AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK--PNEVV 399
+++G+ +F +M + R + Y ++ + +AG + A V K M P +++
Sbjct: 411 CKRVEDGVELFREMSQ-RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 400 LGS-LLAACRTKGEIGLAEKVMKYL 423
S LL + G++ A + KYL
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYL 494
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 122/300 (40%), Gaps = 16/300 (5%)
Query: 176 EIEDALQLFDEF----PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVX 231
+++DA+ LF + P + + + L+ K + + + +MQ G++ D T
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 232 XXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLH 291
V +M D V +S SL++ Y I A + D M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS-SLLNGYCHSKRISDAVALVDQMVE 181
Query: 292 R----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDE 347
++ ++I G + A EA++ + M + G +PD V+Y + G ID
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 348 GLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLL 404
L + NKM+ RI + + ++D + +E A+D+ M K PN V SL+
Sbjct: 242 ALNLLNKME-AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 405 AACRTKGEIGLAEKVMKYLVE--LDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
G A +++ ++E ++P + L+ + GK A K+ M R I
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE-GKLVEAEKLHEEMIQRSI 359
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 17/277 (6%)
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEF------PVRNAISWTALIGGFVKKDHHKQALE 213
+LV++ ++L+GY IEDA+ LFD+ P N +++T LI K H A+E
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP--NVVTYTTLIRCLCKNRHLNHAVE 209
Query: 214 CFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMY 273
F +M +G P+ VT W+ R +M + ++ NV +LID +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFTALIDAF 268
Query: 274 ARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDG 329
+ G + A+++++ M+ ++ ++ S+I G GL DEA F M++ G P+
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 330 VSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIK 389
V YT + + +++G++IF +M + +A I Y L+ Y GR + A +V
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT-YTVLIQGYCLVGRPDVAQEVFN 387
Query: 390 NMPMK---PNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
M + P+ LL G++ A + +Y+
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 167/389 (42%), Gaps = 25/389 (6%)
Query: 55 PTVAWTSSIAHHC--RSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
P + T +I HC S Q A+ +M + EP+ +T +LL+G H+
Sbjct: 115 PPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIED--- 171
Query: 113 GATVHAYARKLGLDMN-DVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTM 167
+ + + LG+ +V T LI K+ +++ A +F+QMG N+V++N +
Sbjct: 172 --AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 168 LDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
+ G G DA L + R N I++TALI FVK +A E + M V
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
PD T + L M ++ N + +LI + + +E
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYL-MERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 284 QVFDGMLHRTMV----SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
++F M + +V ++ +I G+ G D A FN M PD +Y L
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPN 396
G +++ L IF M++ R + I Y ++ + G++E+A D+ ++ MKPN
Sbjct: 409 CCNGKVEKALMIFEYMRK-REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 397 EVVLGSLLAACRTKGEIGLAEKVMKYLVE 425
+ ++++ +G I A+ + K + E
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 25/293 (8%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + + + C G+ +AA M + +EPN IT L+ + V G
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID--------AFVKVGKL 274
Query: 116 VHA---YARKLGLDMN-DVKVGTALIDMYAKSGNVDSARLVFDQM----GLRNLVSWNTM 167
+ A Y + + + DV +LI+ G +D AR +F M N V + T+
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 168 LDGYMRSGEIEDALQLFDEFP----VRNAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
+ G+ +S +ED +++F E V N I++T LI G+ A E F +M
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
PD T + M + + N+ +I + G +E A
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFE-YMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 284 QVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSY 332
+F + + M +++ ++I GF GL EA S F M+++GF P+ Y
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 182/443 (41%), Gaps = 57/443 (12%)
Query: 39 NTNQSFSLRHNTK--HTDPT-VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLI 95
N +SF +R K H +P+ + + + + ++G + +A + M++ P+ T
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 96 TLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQ 155
L G Y S V+ A G+ MN + L++ K G ++ A + +
Sbjct: 324 ILFDG---YSSNEKAEAALGVYETAVDSGVKMN-AYTCSILLNALCKEGKIEKAEEILGR 379
Query: 156 MGLRNLVS----WNTMLDGYMRSG-----------------------------------E 176
+ LV +NTM+DGY R G E
Sbjct: 380 EMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGE 439
Query: 177 IEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXX 232
+E+A + ++ ++ + ++ LIGG+ +K + + +EM+ +G P+ V+
Sbjct: 440 MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGT 499
Query: 233 XXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR 292
V R M + VR+ N LID G IE A + ML +
Sbjct: 500 LINCLCKGSKLLEAQIVKR-DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 293 ----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEG 348
+V++N++I G + G EA + ++G +PD +Y ++ AG +
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 349 LRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACR 408
+ ++ +MKR I P ++ Y L+ L ++ G +E + M +KP+ +V +L
Sbjct: 619 IALYEEMKR-SGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 409 TKGEIGLAEKVMKYLVELDPGGD 431
G++ A + K ++E G D
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLD 699
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 192/475 (40%), Gaps = 67/475 (14%)
Query: 43 SFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCA 102
+FSL + D + S + + S + EAA F +R + P++ +L LL
Sbjct: 98 AFSLSSPSLKHDFSYLLLSVLLNE--SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLV 155
Query: 103 HYPSPSSVSFGATVHAYARKLGLDMNDVKV--GTALIDMYAKSGNVDSARLVFDQMG--- 157
+ F T++ + L D K G A I K +V +F++M
Sbjct: 156 K-----TKQFRVTINVFLNILESDFRPSKFMYGKA-IQAAVKLSDVGKGLELFNRMKHDR 209
Query: 158 -LRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGF---------- 202
++ +N ++DG + + DA QLFDE R + I++ LI G+
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 203 -----VKKDHHKQALECF--------------------REMQLSGVAPDYVTVXXXXXXX 237
+K DH + +L F +EM+ G PD T
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVS- 296
V+ + +K N + L++ + G IE A ++ + + +V
Sbjct: 330 SSNEKAEAALGVYETAV-DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 297 ---WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+N++I G+ G A +M+K+G +PD ++Y + G ++ + N
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAACRTK 410
KMK ++ ++P +E Y L+ Y R ++ D++K M PN V G+L+ C K
Sbjct: 449 KMK-LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI-NCLCK 506
Query: 411 GEIGLAEKVMKYLVELDPGGDSN---YVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
G L +++K +E D G Y +L + + GK + A + + M +GI
Sbjct: 507 GSKLLEAQIVKRDME-DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 129/319 (40%), Gaps = 48/319 (15%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHY------------ 104
+A+ I C G++ A +M+ V P+ T L+ G
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 105 -----PSPSSVSFGATVHAYARKLGL--------DMND------VKVGTALIDMYAKSGN 145
P+ VS+G ++ + L DM D V++ LID G
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 146 VDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTA 197
++ A +M G+ NLV++NT++DG +G++ +A L E + + ++ +
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 198 LIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQD 257
LI G+ + ++ + + EM+ SG+ P T RL +
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIE----LTERL-FGEM 659
Query: 258 SLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEA 313
SLK ++ V N ++ YA G +E A + M+ +++ ++NS+I+G G E
Sbjct: 660 SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
Query: 314 LSFFNSMQKEGFEPDGVSY 332
S + M EP+ +Y
Sbjct: 720 RSLIDEMNAREMEPEADTY 738
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 13/220 (5%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR----TMVSWNSIIVGFAANGL 309
M D + +V + N LID + + A Q+FD ML R +++++N++I G+ G
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG 369
+++ M+ + EP +++ L AG++++ + +MK + P +
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL-GFVPDAFTFS 323
Query: 370 CLVDLYSRAGRLEEALDVIK---NMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVEL 426
L D YS + E AL V + + +K N LL A +G+I AE+++ E+
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR--EM 381
Query: 427 DPGGDSNYVLLSNI---YAAVGKWDGANKVRRAMKDRGIR 463
G N V+ + + Y G GA AM+ +G++
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 176/412 (42%), Gaps = 60/412 (14%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
CR + V A S +M + EP+ +T+ +L++G + + V + + ++G
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING---FCQGNRVFDAIDLVSKMEEMGFR 171
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQ 182
DV + +ID K G V+ A +FD+M G+R + V++N+++ G SG DA +
Sbjct: 172 -PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 183 LFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
L + +R N I++TA+I FVK+ +A++ + EM V PD T
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY-------- 282
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR----TM 294
NSLI+ G ++ A+Q+ D M+ + +
Sbjct: 283 ----------------------------NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
V++N++I GF + DE F M + G D ++Y + AG D IF++
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIG 414
M P I Y L+ R+E+AL + +NM E+ + + +IG
Sbjct: 375 MDS----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 415 LAEKVMKYLVELDPGGDS----NYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
E L G +Y + + + +WD ++ + R M++ G+
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 159/351 (45%), Gaps = 56/351 (15%)
Query: 129 DVKVGTALIDMYAKSGNV-DSARLV--FDQMGLR-NLVSWNTMLDGYMRSGEIEDALQLF 184
DV ++LI+ + + V D+ LV ++MG R ++V +NT++DG + G + DA++LF
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 185 DEFP---VR-NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXX 240
D VR +A+++ +L+ G A R+M + + P+ +T
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF---------- 247
Query: 241 XXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VS 296
++ID++ + G A ++++ M R + +
Sbjct: 248 --------------------------TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
+NS+I G +G DEA + M +G PD V+Y + + +DEG ++F +M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPN----EVVLGSLLAACRTKGE 412
+ + I Y ++ Y +AGR + A ++ M +PN ++L L R +
Sbjct: 342 QRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 413 IGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
+ L E + K +ELD + Y ++ + +G + A + R++ +G++
Sbjct: 401 LVLFENMQKSEIELDI---TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 137/321 (42%), Gaps = 36/321 (11%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + + I C+ G + +A F RM V + +T +L++G S
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD------ 227
Query: 116 VHAYARKLGLDM------NDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWN 165
A +L DM +V TA+ID++ K G A ++++M R ++ ++N
Sbjct: 228 ----AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLS 221
++++G G +++A Q+ D + + +++ LI GF K + + FREM
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 222 GVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGC--I 279
G+ D +T + DS + N+R + L +Y C +
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAA---QEIFSRMDS-RPNIRTYSIL--LYGLCMNWRV 397
Query: 280 EIARQVFDGM----LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
E A +F+ M + + ++N +I G G ++A F S+ +G +PD VSYT
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 336 LTACSHAGLIDEGLRIFNKMK 356
++ D+ ++ KM+
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQ 478
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 42/238 (17%)
Query: 267 NSLIDMYARCGCIEIARQVFDGML----HRTMVSWNSIIVGFAANGLADEALSFFNSMQK 322
N +I+ RC IA V M+ +V+ +S+I GF +A+ + M++
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKR------------------------- 357
GF PD V Y + GL+++ + +F++M+R
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 358 ---------VRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLA 405
+R I P + + ++D++ + G+ EA+ + + M + P+ SL+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 406 ACRTKGEIGLAEKVMKYLVELDPGGD-SNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
G + A++++ +V D Y L N + + D K+ R M RG+
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 199/449 (44%), Gaps = 31/449 (6%)
Query: 70 GQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDMND 129
G+ EA S F + E +P+ IT TL++ S+ ++ + K GL D
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSL---LSLISKVEKNGLK-PD 388
Query: 130 VKVGTALIDMYAKSGNVDSARLVFDQM---GLRNLVS-WNTMLDGYMRSGEIEDALQLF- 184
+ A+I+ ++SGN+D A +F++M G + S +NT++ GY + G++E++ +L
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 185 ----DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXX 240
DE N + L+ + + ++A +MQ GV PD VT
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 241 XXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMVS 296
+ M + +K NVR ++++ Y G +E A + F M +H +
Sbjct: 509 GSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFV 568
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
+NS+I GF D + M++ G +PD V+++ + A S G + I+ M
Sbjct: 569 FNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML 628
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEI 413
I P I + L Y+RAG E+A ++ M ++PN V+ +++ + GE+
Sbjct: 629 E-GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEM 687
Query: 414 GLAEKVMKYL---VELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKD-RGIRKKPGFS 469
A +V K + V L P + L+ A W K +KD G P
Sbjct: 688 KKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPW----KAEELLKDMEGKNVVPTRK 743
Query: 470 SIEIDSSIYKFVAGDKSHEEN--GSIYAS 496
++++ + +K + S++ N GS +++
Sbjct: 744 TMQLIADGWKSIGVSNSNDANTLGSSFST 772
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 153/352 (43%), Gaps = 17/352 (4%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
T+ + + I SG L +A F +M+E+ +P T TL+ G S
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS--RL 446
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGY 171
+ R L ND + L+ + ++ A + +M G++ ++V++NT+ Y
Sbjct: 447 LDMMLRDEMLQPND-RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY 505
Query: 172 MRSGEIEDALQLFDEFPVRNAI-----SWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
R G A + + N + + ++ G+ ++ ++AL F M+ GV P+
Sbjct: 506 ARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG----CIEIA 282
V L M + +K +V ++L++ ++ G C EI
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDL-MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIY 624
Query: 283 RQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
+ +G + + +++ + G+A G ++A N M+K G P+ V YT ++ A
Sbjct: 625 TDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSA 684
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK 394
G + + ++++ KM + ++P + Y L+ + A + +A +++K+M K
Sbjct: 685 GEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHR----TMVSWNSIIVGFAANGLADEALSFF 317
+VR L++ G + A +F+ ++ +++++ +++ LS
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 318 NSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSR 377
+ ++K G +PD + + + A S +G +D+ ++IF KMK P + L+ Y +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKE-SGCKPTASTFNTLIKGYGK 436
Query: 378 AGRLEEA---LD-VIKNMPMKPNEVVLGSLLAACRTKGEI----GLAEKVMKYLVELDPG 429
G+LEE+ LD ++++ ++PN+ L+ A + +I + K+ Y V+ D
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV- 495
Query: 430 GDSNYVLLSNIYAAVG 445
+ L+ YA +G
Sbjct: 496 --VTFNTLAKAYARIG 509
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 167/376 (44%), Gaps = 29/376 (7%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
CR QL A + +M + P+ +TL +LL+G H + +S + ++G
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH---GNRISEAVALVDQMVEMGYQ 167
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDALQ 182
+ V T + ++ + ++ LV ++M ++ +LV++ +++G + GE + AL
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALV-ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 183 LFDEFPV----RNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
L ++ + + ++ +I K H AL F EM G+ PD T
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT-----YSSL 281
Query: 239 XXXXXXXXXW--VHRLV--MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRT- 293
W RL+ M + + NV NSLID +A+ G + A ++FD M+ R+
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 294 ---MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLR 350
+V++NS+I GF + DEA F M + PD V+Y + A + +G+
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 351 IFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAAC 407
+F M R R + Y L+ + +A + A V K M + PN + +LL
Sbjct: 402 LFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 408 RTKGEIGLAEKVMKYL 423
G++ A V +YL
Sbjct: 461 CKNGKLEKAMVVFEYL 476
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 176/406 (43%), Gaps = 67/406 (16%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V +++ I C+ + +A + F M + P+ T +L+S +Y S S
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS---- 295
Query: 116 VHAYARKLGLDMNDVKVG------TALIDMYAKSGNVDSARLVFDQMGLR----NLVSWN 165
+L DM + K+ +LID +AK G + A +FD+M R N+V++N
Sbjct: 296 ------RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 166 TMLDGYMRSGEIEDALQLF------DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
++++G+ +++A Q+F D P + +++ LI GF K +E FR+M
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLP--DVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G+ + VT +H D DN ++
Sbjct: 408 RRGLVGNTVT---------------YTTLIHGFFQASDC--DNAQM-------------- 436
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
+ +Q+ +H ++++N+++ G NG ++A+ F +QK EPD +Y
Sbjct: 437 -VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM----PMKP 395
AG +++G +F + ++ + P + Y ++ + + G EEA + M P+ P
Sbjct: 496 CKAGKVEDGWDLFCSLS-LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-P 553
Query: 396 NEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGD-SNYVLLSNI 440
+ +L+ A G+ + +++K + GD S Y L++++
Sbjct: 554 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 142/343 (41%), Gaps = 56/343 (16%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGA 114
V + S I + G+L+EA F M + ++PN +T +L++G C H
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH----------- 358
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM----GLRNLVSWNTMLDG 170
+D A+ +F M L ++V++NT+++G
Sbjct: 359 -----------------------------DRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 171 YMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+ ++ ++ D ++LF + R N +++T LI GF + A F++M GV P+
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
+T V + + ++ ++ N + + + G +E +F
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFE-YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 287 DGM----LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
+ + ++++N++I GF GL +EA + F M+++G PD +Y + A
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL 385
G + +M R R A YG + D+ GRL++
Sbjct: 569 GDKAASAELIKEM-RSCRFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 115/278 (41%), Gaps = 42/278 (15%)
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECF 215
NL ++N M++ R ++ AL + + + ++ +L+ GF + +A+
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 216 REMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYAR 275
+M G PD VT VH L + + + +L++
Sbjct: 159 DQMVEMGYQPDTVTFTT---------------LVHGLFQHNKASE-----AVALVERMVV 198
Query: 276 CGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
GC +V++ ++I G G D AL+ N M+K E D V Y+
Sbjct: 199 KGC------------QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 336 LTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---P 392
+ + +D+ L +F +M + I P + Y L+ GR +A ++ +M
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDN-KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 393 MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE--LDP 428
+ PN V SL+ A +G++ AEK+ +++ +DP
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 42 QSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGC 101
Q F+L + V + + I C++ ++V+ F M + N +T TL+ G
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG- 424
Query: 102 AHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR-- 159
+ S V G+ N + T L+D K+G ++ A +VF+ +
Sbjct: 425 --FFQASDCDNAQMVFKQMVSDGVHPNIMTYNT-LLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 160 --NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALE 213
++ ++N M +G ++G++ED LF ++ + I++ +I GF KK ++A
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 214 CFREMQLSGVAPD 226
F +M+ G PD
Sbjct: 542 LFIKMKEDGPLPD 554
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 186/409 (45%), Gaps = 65/409 (15%)
Query: 116 VHAYARKLGLDMN-DVKVGTALIDMYAKSGNVDSARLVFDQ-----MGLR-NLVSWNTML 168
+H Y + + +++ DV + +++ Y +SGNVD A +VF + +GL N+V++N+++
Sbjct: 210 LHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKA-MVFAKETESSLGLELNVVTYNSLI 268
Query: 169 DGYMRSGEIED---ALQLFDEFPV-RNAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
+GY G++E L+L E V RN +++T+LI G+ KK ++A F
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE-------- 320
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
++ + L + + L+D Y R G I A +
Sbjct: 321 ----------------------------LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR 352
Query: 285 VFDGMLH---RTMVS-WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
V D M+ RT + NS+I G+ +G EA F+ M +PD +Y +
Sbjct: 353 VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYC 412
Query: 341 HAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNE 397
AG +DE L++ ++M + + + P + Y L+ YSR G + L + K M + +E
Sbjct: 413 RAGYVDEALKLCDQMCQ-KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 398 VVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAM 457
+ +LL A G+ A K+ + + L G ++ + L+ + + + K + N+ + +
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENV--LARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 458 KDRGI-RKKPGFSSIEIDSSIYKFVA------GDKSHEENGSIYASLEL 499
+ I R KP + + S Y V K + E I+ ++E+
Sbjct: 530 DNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 149/341 (43%), Gaps = 18/341 (5%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V +TS I +C+ G + EA F ++E ++ + L+ G Y +
Sbjct: 296 VVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG---YCRTGQIRDAVR 352
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLV----SWNTMLDGY 171
VH ++G+ N + +LI+ Y KSG + A +F +M +L ++NT++DGY
Sbjct: 353 VHDNMIEIGVRTN-TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 172 MRSGEIEDALQLFDEF----PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
R+G +++AL+L D+ V +++ L+ G+ + L ++ M GV D
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
++ + V+ + L D + + N +I + + A+++ D
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL-NVMISGLCKMEKVNEAKEILD 530
Query: 288 GM-LHR---TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
+ + R + ++ ++ G+ G EA + M+++G P Y ++
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR 590
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
+++ + ++ R R + P + YG L+ + G +++A
Sbjct: 591 HLNKVADLVIEL-RARGLTPTVATYGALITGWCNIGMIDKA 630
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 17/253 (6%)
Query: 262 NVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQ 321
+ R +++I+MY+ C + A VF+ M R +W ++I A NG + A+ F
Sbjct: 142 DARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFI 201
Query: 322 KEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRL 381
+EG +PD + AC G I+EGL F M R + +E Y ++++ + G L
Sbjct: 202 EEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHL 261
Query: 382 EEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDP---GGDSNYVLLS 438
+EALD ++ M ++P+ + +L+ C +G + L ++ + + +LD +SN +
Sbjct: 262 DEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESN----A 317
Query: 439 NIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHEENGSIYASLE 498
+ AA K++ + IR P +++F AGD SH S + SL+
Sbjct: 318 GLVAAKASDSAMEKLKELRYCQMIRDDP-------KKRMHEFRAGDTSHLGTVSAFRSLK 370
Query: 499 LLSFELQLCGYVP 511
+ ++ G+VP
Sbjct: 371 VQMLDI---GFVP 380
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 164/413 (39%), Gaps = 79/413 (19%)
Query: 135 ALIDMYAKSGNVDSARLVFD---QMGLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFP-- 188
+LI Y +G + +F QMG+ +++++N++L ++ G A LFDE
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 189 ---VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXX 245
++ ++ LI GF K +A F++M+L PD VT
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTY--------------- 247
Query: 246 XXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGML------HRTMVSWNS 299
N++ID R G ++IA V GML H +VS+ +
Sbjct: 248 ---------------------NTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 300 IIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIF-NKMKRV 358
++ G+ DEA+ F+ M G +P+ V+Y + S A DE I
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAF 346
Query: 359 RRIAPRIEHYGCLVDLYSRAGRLEEALDVIK---NMPMKPNEVVLGSLLAACRTKGEIGL 415
AP + L+ + AG L+ A+ V + NM + P+ L+ + E
Sbjct: 347 TTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDR 406
Query: 416 AEKVMKYLVELDP--GGD------SNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPG 467
AE + L E + G D + Y + A GK A KV R + RG++ P
Sbjct: 407 AETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS 466
Query: 468 FSSIEIDSSIYKFVAGDKSHEENGSIYASLELLSFELQLCGYVPDFSDKETYE 520
+ ++ + G H G + ELL L+ +VPD ETYE
Sbjct: 467 YKTL---------ITG---HCREGKFKPAYELLVLMLRR-EFVPDL---ETYE 503
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 120/318 (37%), Gaps = 65/318 (20%)
Query: 59 WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLS--------GCAH-YPSPSS 109
+ S I + +G E+ F M++ + P+ +T +LLS G AH
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 110 VSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWN 165
++G T +Y LI+ + K+ VD A +F M L ++V++N
Sbjct: 201 RTYGVTPDSYT------------FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYN 248
Query: 166 TMLDGYMRSGEIEDALQLF--------DEFPVRNAISWTALIGGFVKKDHHKQALECFRE 217
T++DG R+G+++ A + D P N +S+T L+ G+ K +A+ F +
Sbjct: 249 TIIDGLCRAGKVKIAHNVLSGMLKKATDVHP--NVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 218 MQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG 277
M G+ P+ VT HR D +KD + N +A
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSE---------AHR----YDEIKDILIGGNDAFTTFAPDA 353
Query: 278 CIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALT 337
C ++N +I G D A+ F M PD SY+ +
Sbjct: 354 C-----------------TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396
Query: 338 ACSHAGLIDEGLRIFNKM 355
D +FN++
Sbjct: 397 TLCMRNEFDRAETLFNEL 414
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 277 GCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGAL 336
GC+++ + F NS+I + GL E++ F +M++ G P +++ L
Sbjct: 132 GCVKLQDRYF-----------NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL 180
Query: 337 TACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPM--- 393
+ G +F++M+R + P + L++ + + ++EA + K+M +
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC 240
Query: 394 KPNEVVLGSLLAACRTKGEIGLAEKV----MKYLVELDPGGDSNYVLLSNIYAAVGKWDG 449
P+ V +++ G++ +A V +K ++ P S Y L Y + D
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS-YTTLVRGYCMKQEIDE 299
Query: 450 ANKVRRAMKDRGIR 463
A V M RG++
Sbjct: 300 AVLVFHDMLSRGLK 313
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 158/376 (42%), Gaps = 27/376 (7%)
Query: 70 GQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVS--FGATVHAYARKLGLDM 127
G L EA F +M+ V P + LL A V F + A AR
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 128 NDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSWNTMLDGYMRSGEIEDALQL 183
N +ID K G+V++AR +F++M R L V++N+M+DG+ + G ++D +
Sbjct: 266 N------IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 184 FDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXX 239
F+E + I++ ALI F K LE +REM+ +G+ P+ V+
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 240 XXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNS 299
+ + M + L N SLID + G + A ++ + ML + V WN
Sbjct: 380 EGMMQQAIKFY-VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML-QVGVEWNV 437
Query: 300 IIVGFAANGLAD-----EALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
+ +GL D EA F M G P+ SY + A +D L + N+
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAACRTKG 411
+K R I P + YG + ++E A V+ M +K N ++ +L+ A G
Sbjct: 498 LKG-RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 412 EIGLAEKVMKYLVELD 427
++ + ELD
Sbjct: 557 NPTEGLHLLDEMKELD 572
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 49/396 (12%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNIT---LITLLSGCAHYP------- 105
TV + S I + G+L + F M++ EP+ IT LI P
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR 356
Query: 106 -------SPSSVSFGATVHAYAR--------KLGLDMNDVKV------GTALIDMYAKSG 144
P+ VS+ V A+ + K +DM V + T+LID K G
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Query: 145 NV-DSARLVFD--QMGLR-NLVSWNTMLDGYMRSGEIEDALQLFDEFP----VRNAISWT 196
N+ D+ RL + Q+G+ N+V++ ++DG + +++A +LF + + N S+
Sbjct: 417 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 197 ALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQ 256
ALI GFVK + +ALE E++ G+ PD + V M +
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN-EMKE 535
Query: 257 DSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMVSWNSIIVGFAANGLADE 312
+K N + +L+D Y + G + D M + T+V++ +I G N L +
Sbjct: 536 CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK 595
Query: 313 ALSFFNSMQKE-GFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCL 371
A+ +FN + + G + + +T + ++ +F +M + + + P Y L
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ-KGLVPDRTAYTSL 654
Query: 372 VDLYSRAGRLEEAL---DVIKNMPMKPNEVVLGSLL 404
+D + G + EAL D + + MK + + SL+
Sbjct: 655 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 146/348 (41%), Gaps = 59/348 (16%)
Query: 135 ALIDMYAKSGNVDSARLVFDQM---GLRNLV-SWNTMLDGYMRSGEIEDALQLFDEFPVR 190
L+ +AK G D + F M G R V ++N M+D + G++E A LF+E R
Sbjct: 232 GLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 291
Query: 191 ----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
+ +++ ++I GF K + F EM+ PD +T
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY---------------- 335
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMVSWNSIIV 302
N+LI+ + + G + I + + M L +VS+++++
Sbjct: 336 --------------------NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIA 362
F G+ +A+ F+ M++ G P+ +YT + A G + + R+ N+M +V +
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV-GVE 434
Query: 363 PRIEHYGCLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAACRTKGEIGLAEKV 419
+ Y L+D A R++EA ++ M + PN +L+ + ++
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM---DRA 491
Query: 420 MKYLVELDPGGDSNYVLLSNIY----AAVGKWDGANKVRRAMKDRGIR 463
++ L EL G +LL + ++ K + A V MK+ GI+
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 136/353 (38%), Gaps = 63/353 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V++++ + C+ G + +A +V MR + PN T +L+ ++ G
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID--------ANCKIGNL 418
Query: 116 VHAYARKLGLDMNDVKVG------TALIDMYAKSGNVDSARLVFDQMG----LRNLVSWN 165
A+ +LG +M V V TALID + + A +F +M + NL S+N
Sbjct: 419 SDAF--RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 166 TMLDGYMRSGEIEDALQLFDEFPVR----------------------------------- 190
++ G++++ ++ AL+L +E R
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 191 ----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXX 246
N++ +T L+ + K + + L EM+ + VT
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 247 XWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV----SWNSIIV 302
+ L+ N + ++ID + +E A +F+ M+ + +V ++ S++
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 303 GFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
G G EAL+ + M + G + D ++YT + SH + + +M
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGA 114
++ +T+ + + +SG E M+E ++E +T L+ G C + +V +
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY-- 599
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLV----SWNTMLDG 170
+ + GL N + TA+ID K V++A +F+QM + LV ++ +++DG
Sbjct: 600 -FNRISNDFGLQAN-AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 171 YMRSGEIEDALQLFDEFP----VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+ G + +AL L D+ + +++T+L+ G + ++A EM G+ PD
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Query: 227 YV 228
V
Sbjct: 718 EV 719
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 166/399 (41%), Gaps = 36/399 (9%)
Query: 50 TKHTDPTVAWTSSIAHH-CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPS 108
+K D V + + H CRS ++ + MR+ + PN +T TL++G + +
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING---FSNEG 352
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSW 164
V + + GL N V ALID + GN A +F M + L VS+
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTF-NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNA-----ISWTALIGGFVKKDHHKQALECFREMQ 219
+LDG ++ E + A + RN I++T +I G K +A+ EM
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMK-RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 220 LSGVAPDYVT----VXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYAR 275
G+ PD VT + ++R+ L N + ++LI R
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV-----GLSPNGIIYSTLIYNCCR 525
Query: 276 CGCIEIARQVFDGML----HRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVS 331
GC++ A ++++ M+ R ++N ++ G EA F M +G P+ VS
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 332 YTGALTACSHAGLIDEGLRIFNKMKRVRRIA--PRIEHYGCLVDLYSRAGRLEEALDVIK 389
+ + ++G EGL+ F+ + ++ P YG L+ + G L EA +K
Sbjct: 586 FDCLINGYGNSG---EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 642
Query: 390 NM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE 425
++ P + V+ +LL A G + A + +V+
Sbjct: 643 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 681
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 148/353 (41%), Gaps = 24/353 (6%)
Query: 129 DVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDALQLF 184
DV LI++ G+ + + + +M +V++NT+L Y + G + A++L
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 185 DEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXX 240
D + + ++ LI + + + R+M+ + P+ VT
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351
Query: 241 XXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMVS 296
+ M L N N+LID + G + A ++F M L + VS
Sbjct: 352 GKVLIASQLLN-EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 297 WNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMK 356
+ ++ G N D A F+ M++ G ++YTG + G +DE + + N+M
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 357 RVRRIAPRIEHYGCLVDLYSRAGRLEEALDV---IKNMPMKPNEVVLGSLLAACRTKGEI 413
+ I P I Y L++ + + GR + A ++ I + + PN ++ +L+ C G
Sbjct: 471 K-DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG-- 527
Query: 414 GLAEKVMKYLVELDPGGDSNY----VLLSNIYAAVGKWDGANKVRRAMKDRGI 462
L E + Y + G ++ VL++++ A GK A + R M GI
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA-GKVAEAEEFMRCMTSDGI 579
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 155/397 (39%), Gaps = 68/397 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGA 114
TV + + + C+SG L +A S F M + + P++ T +L+SG C + ++ F
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMG----LRNLVSWNTMLDG 170
A L N V + T +D K+G + +QM ++V+ N M+DG
Sbjct: 713 EAEARGNVLP---NKV-MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768
Query: 171 YMRSGEIEDALQLFDEFPVRNA----ISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
Y R G+IE L E +N ++ L+ G+ K+ + +R + L+G+ PD
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVM---TQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
+T H LV+ + L+ +++ + I C +E+ R
Sbjct: 829 KLT-------------------CHSLVLGICESNMLEIGLKILKAFI-----CRGVEVDR 864
Query: 284 QVFDGMLHRTM----VSW--------------------NSIIVGFAANGLADEALSFFNS 319
F+ ++ + ++W ++++ N E+ +
Sbjct: 865 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 924
Query: 320 MQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAG 379
M K+G P+ Y G + G I + +M +I P +V ++ G
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI-AHKICPPNVAESAMVRALAKCG 983
Query: 380 RLEEA---LDVIKNMPMKPNEVVLGSLLAACRTKGEI 413
+ +EA L + M + P +L+ C G +
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 1020
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 113/290 (38%), Gaps = 13/290 (4%)
Query: 139 MYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAIS 194
M KS V A + ++ N ++ ++ Y+R G I+D+L++F + + +
Sbjct: 141 MSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYT 200
Query: 195 WTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVM 254
A++G VK +EM + PD T ++ + M
Sbjct: 201 CNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQ-KM 259
Query: 255 TQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR----TMVSWNSIIVGFAANGLA 310
+ + N+++ Y + G + A ++ D M + + ++N +I +
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 311 DEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGC 370
+ M+K P+ V+Y + S+ G + ++ N+M ++P +
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF-GLSPNHVTFNA 378
Query: 371 LVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKGEIGLAE 417
L+D + G +EAL + M K P+EV G LL E LA
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 155/350 (44%), Gaps = 24/350 (6%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
C++G++ +A M+ PN ++ TL+ G G A A +
Sbjct: 234 CKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGN-----GKMYKADAVLKEMV 288
Query: 127 MNDVKVGTA----LIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIE 178
NDV LID + K N+ + VF +M + N++S+N++++G G+I
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 179 DALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXX 234
+A+ + D+ N I++ ALI GF K D K+AL+ F ++ G P +
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT-TRMYNML 407
Query: 235 XXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR-- 292
+ + M ++ + +V N LI R G IE A+++FD + +
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 293 -TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRI 351
+V+++ ++ G+ G + +A M K G +P ++Y + G + +
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 352 FNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEV 398
+M++ RR+ + Y L+ YS+ G+LE+A ++ M K PN +
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 127/285 (44%), Gaps = 44/285 (15%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGA 114
+++ S I C G++ EA S +M A V+PN IT L++G C + ++
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLV----SWNTMLDG 170
+V + ++ LID Y K G +D + ++M +V ++N ++ G
Sbjct: 391 SVKGQGA-----VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 171 YMRSGEIEDALQLFDEFPVR---NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
R+G IE A +LFD+ + + +++ L+ G+ +K ++A +EM G+ P +
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH 505
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
+T + +VM + N++ + ++ +E R+
Sbjct: 506 LT--------------------YNIVMKGYCKEGNLKAATNMRTQ------MEKERR--- 536
Query: 288 GMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSY 332
L + S+N ++ G++ G ++A N M ++G P+ ++Y
Sbjct: 537 --LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 194/452 (42%), Gaps = 68/452 (15%)
Query: 68 RSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLDM 127
R G + E ++ M E +V PN T +++G Y +V + + GLD
Sbjct: 195 RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNG---YCKLGNVEEANQYVSKIVEAGLD- 250
Query: 128 NDVKVGTALIDMYAKSGNVDSARLVFDQMGL----RNLVSWNTMLDGYMRSGEIEDALQL 183
D T+LI Y + ++DSA VF++M L RN V++ ++ G + I++A+ L
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 184 F-----DE-FP-VRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXX 236
F DE FP VR ++T LI + +AL +EM+ +G+ P+ T
Sbjct: 311 FVKMKDDECFPTVR---TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 237 XXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM------- 289
+ M + L NV N+LI+ Y + G IE A V + M
Sbjct: 368 LCSQCKFEKARELLG-QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 290 ----------------LHRTM---------------VSWNSIIVGFAANGLADEALSFFN 318
+H+ M V++NS+I G +G D A +
Sbjct: 427 NTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 319 SMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRA 378
M G PD +YT + + + ++E +F+ +++ + + P + Y L+D Y +A
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ-KGVNPNVVMYTALIDGYCKA 545
Query: 379 GRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKGEIG----LAEKVMKYLVELDPGGD 431
G+++EA +++ M K PN + +L+ G++ L EK++K + L P
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK--IGLQPTVS 603
Query: 432 SNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
++ +L+ + G +D A + M G +
Sbjct: 604 TDTILIHRLLKD-GDFDHAYSRFQQMLSSGTK 634
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 141/341 (41%), Gaps = 56/341 (16%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLL-SGCAHYPSPSSVSFGAT 115
VA+T I C + ++ EA FV+M++ E P T L+ S C +++
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGY 171
+ K ++ T LID + AR + QM GL N++++N +++GY
Sbjct: 349 MEETGIK-----PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 172 MRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDY 227
+ G IEDA+ + + R N ++ LI G+ K + HK A+ +M V PD
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDV 462
Query: 228 VTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFD 287
VT NSLID R G + A ++
Sbjct: 463 VTY------------------------------------NSLIDGQCRSGNFDSAYRLLS 486
Query: 288 GMLHRTMV----SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAG 343
M R +V ++ S+I + +EA F+S++++G P+ V YT + AG
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 344 LIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
+DE + KM + P + L+ G+L+EA
Sbjct: 547 KVDEAHLMLEKMLS-KNCLPNSLTFNALIHGLCADGKLKEA 586
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 168/411 (40%), Gaps = 70/411 (17%)
Query: 135 ALIDMYAKSGNVDSARLVFDQM----GLRNLVSWNTMLDGYMRSGEIED----------- 179
L++ A+ G VD + V+ +M N+ ++N M++GY + G +E+
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247
Query: 180 ------------------------ALQLFDEFPV----RNAISWTALIGGFVKKDHHKQA 211
A ++F+E P+ RN +++T LI G +A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 212 LECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLV--MTQDSLKDNVRVSNSL 269
++ F +M+ P TV LV M + +K N+ L
Sbjct: 308 MDLFVKMKDDECFP---TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 270 IDMYARCGCIEIARQVFDGMLHR----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGF 325
ID E AR++ ML + ++++N++I G+ G+ ++A+ M+
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 326 EPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA- 384
P+ +Y + + + + + + NKM R++ P + Y L+D R+G + A
Sbjct: 425 SPNTRTYNELIKGYCKSN-VHKAMGVLNKMLE-RKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 385 --LDVIKNMPMKPNEVVLGSLL-AACRTKGEIGLAEKVMKYLVELDPGG-DSNYVLLSNI 440
L ++ + + P++ S++ + C++K E+ L+ G + N V+ + +
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKR----VEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 441 ---YAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSSIYKFVAGDKSHE 488
Y GK D A+ M ++ + K +S+ ++ I+ A K E
Sbjct: 539 IDGYCKAGKVDEAH----LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 139/353 (39%), Gaps = 33/353 (9%)
Query: 51 KHTDPTVA-WTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPS 108
K +P V +T+ I +C++G++ EA +M PN++T L+ G CA
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD----G 581
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---GLR-NLVSW 164
+ + K+GL V T LI K G+ D A F QM G + + ++
Sbjct: 582 KLKEATLLEEKMVKIGLQPT-VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVRNAIS-----WTALIGGFVKKDHHKQALECFREMQ 219
T + Y R G + DA + + N +S +++LI G+ A + + M+
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMR-ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
+G P T H L M K + ++ +M +
Sbjct: 700 DTGCEPSQHTFLSLIK--------------HLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 280 EIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQK-EGFEPDGVSYTGALTA 338
E+ ++ + + S+ +I+G G A F+ MQ+ EG P + + L+
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 339 CSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
C +E ++ + M V + P++E L+ + G E V +N+
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHL-PQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 267 NSLIDMYARCGCIEIARQVFDGMLHRTMV----SWNSIIVGFAANGLADEALSFFNSMQK 322
N+L++ AR G ++ +QV+ ML + ++N ++ G+ G +EA + + + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM--KRVRRIAPRIEHYGCLVDLYSRAGR 380
G +PD +YT + +D ++FN+M K RR H L+ A R
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH---LIHGLCVARR 303
Query: 381 LEEALDVIKNMP-------MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSN 433
++EA+D+ M ++ V++ SL + R + L +++ + + P +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE--TGIKPNIHTY 361
Query: 434 YVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
VL+ ++ + K++ A ++ M ++G+
Sbjct: 362 TVLIDSLCSQC-KFEKARELLGQMLEKGL 389
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 175/412 (42%), Gaps = 57/412 (13%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
C +G++ ++ + + E PN + TL+ GC + + KLGL
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK---KGEIEKAKDLFFEMGKLGLV 230
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMG----LRNLVSWNTMLDGYMRSGEIEDALQ 182
N+ + T LI+ K+G ++++M NL ++N +++ + G +DA Q
Sbjct: 231 ANE-RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289
Query: 183 LFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
+FDE R N +++ LIGG ++ +A + +M+ G+ P+ +T
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY-------- 341
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCG----CIEIARQVFDGMLHRTM 294
N+LID + G + + R + L ++
Sbjct: 342 ----------------------------NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
V++N ++ GF G A M++ G +P V+YT + + + +++ +++
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKG 411
M+ + + P + Y L+ + G++ EA + K+M K PNEV+ +++ +G
Sbjct: 434 MEEL-GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 412 EIGLAEKVMKYLVELDPGGD-SNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
A K++K + E + + ++Y + + K A ++ M D GI
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 11/231 (4%)
Query: 254 MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMV----SWNSIIVGFAANGL 309
+T+ NV + +LID + G IE A+ +F M +V ++ +I G NG+
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 310 ADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYG 369
+ + MQ++G P+ +Y + G + ++F++M R R ++ I Y
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM-RERGVSCNIVTYN 307
Query: 370 CLVDLYSRAGRLEEALDVIKNMP---MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVE- 425
L+ R +L EA V+ M + PN + +L+ G++G A + + L
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Query: 426 -LDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDS 475
L P + +L+S + G GA K+ + M++RGI+ +I ID+
Sbjct: 368 GLSPSLVTYNILVSG-FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 57 VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-------------CAH 103
V + + I CR +L EA +M+ + PN IT TL+ G C
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 104 YP----SPSSVSFGATVHAYAR--------KLGLDMNDVKVG------TALIDMYAKSGN 145
SPS V++ V + R K+ +M + + T LID +A+S N
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 146 VDSA---RLVFDQMGL-RNLVSWNTMLDGYMRSGEIEDALQLFDEFPVRNA----ISWTA 197
++ A RL +++GL ++ +++ ++ G+ G++ +A +LF +N + +
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 198 LIGGFVKKDHHKQALECFREMQLSGVAPD 226
+I G+ K+ +AL+ +EM+ +AP+
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPN 512
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 121/545 (22%), Positives = 217/545 (39%), Gaps = 109/545 (20%)
Query: 35 PYNPNTNQSFSLRHNTKHTDPTVAWTSS-----IAHH-----------CRSGQLVEAAST 78
P + ++ FS TK D +A IAH+ CR +L A S
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 79 FVRMREAEVEPNNITLITLLSGCA-------------------HYP-------------- 105
++ + EPN IT TL++G H P
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 106 -------------------SPSSVSFGATVH--------AYARKLGLDMNDVKVG----- 133
P++V++G ++ A A +L M + +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 134 -TALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDALQLFDEFP 188
+ +ID K G++D+A +F++M ++ N++++N ++ G+ +G +D +L +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 189 VR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXX 244
R N ++++ LI FVK+ ++A E +EM G+APD +T
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 245 XXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM----VSWNSI 300
+ L M N+R N LI+ Y + I+ ++F M R + V++N++
Sbjct: 386 KANQMVDL-MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 301 IVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRR 360
I GF G + A F M P+ V+Y L G ++ L IF K+++ +
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK-SK 503
Query: 361 IAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPM---KPNEVVLGSLLAACRTKGEIGLAE 417
+ I Y ++ A ++++A D+ ++P+ KP ++ KG + AE
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 418 KVMKYLVELDPGGDS-NYVLLSNIYAAVGKWDGANKVRRAMKDRGIRKKPGFSSIEIDSS 476
+ + + E D Y +L I A +G D V+ + K+ GFS +D+S
Sbjct: 564 LLFRKMEEDGHAPDGWTYNIL--IRAHLGDGDATKSVKLIEE----LKRCGFS---VDAS 614
Query: 477 IYKFV 481
K V
Sbjct: 615 TIKMV 619
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 47/332 (14%)
Query: 172 MRSGEIE----DALQLFDEF----PVRNAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
+RSG ++ DA+ LF + P+ I ++ L K + L ++M+L G+
Sbjct: 60 LRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI 119
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
A + T+ ++ + + N ++LI+ G + A
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKII-KLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 284 QVFDGML---HR-TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
++ D M+ H+ +++ N+++ G +G EA+ + M + G +P+ V+Y L
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVV 399
+G + + KM+ R I Y ++D + G L+ A ++ M MK
Sbjct: 239 CKSGQTALAMELLRKMEE-RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK----- 292
Query: 400 LGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYVLLSNIYAAVGKWDGANKVRRAMKD 459
G+ ++ Y + + GG + G+WD K+ R M
Sbjct: 293 --------------GITTNIITYNILI--GG----------FCNAGRWDDGAKLLRDMIK 326
Query: 460 RGIRKKPGFSSIEIDSSIY--KFVAGDKSHEE 489
R I S+ IDS + K ++ H+E
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 156/351 (44%), Gaps = 19/351 (5%)
Query: 54 DPTVAWTSSIAH-HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
+P++ SS+ + +C ++ +A + +M E P+ IT TL+ G + S
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV- 135
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTML 168
A V ++ G N V G +++ K G++D A + ++M ++V +NT++
Sbjct: 136 -ALVDRMVQR-GCQPNLVTYG-VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 169 DGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
D + ++DAL LF E + N +++++LI A + +M +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
P+ VT +H M + S+ ++ NSLI+ + ++ A+Q
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHD-DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 285 VFDGMLHRT----MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
+F+ M+ + + ++N++I GF + ++ F M G D V+YT +
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 341 HAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
H G D ++F +M + P I Y L+D G+LE+AL+V M
Sbjct: 372 HDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 138/306 (45%), Gaps = 13/306 (4%)
Query: 129 DVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSWNTMLDGYMRSGEIEDALQLF---D 185
DV T L++ G V A + D+M + T+++G + G+ E AL L +
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 186 EFPVR-NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXX 244
E ++ + + + A+I K HH A F EM G+ PD +T
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 245 XXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHR----TMVSWNSI 300
+ R M + + +V ++LI+ + G + A +++ ML R T +++NS+
Sbjct: 129 DAEQLLR-DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 301 IVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRR 360
I GF ++A +SM + PD V+++ + A +D G+ IF +M R R
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR-RG 246
Query: 361 IAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAE 417
I Y L+ + + G L+ A D++ M + PN + S+LA+ +K E+ A
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 418 KVMKYL 423
+++ L
Sbjct: 307 AILEDL 312
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 44 FSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAH 103
F+ H+ + ++ I CRSG+ +A M E ++ P+ +T L++
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALV- 157
Query: 104 YPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR---- 159
VS ++ + G+ + ++ID + K ++ A+ + D M +
Sbjct: 158 --KEGKVSEAEEIYGDMLRRGIFPTTITY-NSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECF 215
++V+++T+++GY ++ +++ +++F E R N +++T LI GF + A +
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Query: 216 REMQLSGVAPDYVT 229
M SGVAP+Y+T
Sbjct: 275 NVMISSGVAPNYIT 288
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 155/363 (42%), Gaps = 53/363 (14%)
Query: 41 NQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG 100
++ F H+ T + +T+ I+ C+ G +VEA F M +EP+++T L++G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 101 CAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---G 157
Y + VH + + G N V T LID K G++DSA + +M G
Sbjct: 431 ---YCKAGHMKDAFRVHNHMIQAGCSPNVVTY-TTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 158 LR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPV----RNAISWTALIGGFVKKDHHKQAL 212
L+ N+ ++N++++G +SG IE+A++L EF + +++T L+ + K +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 213 ECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDM 272
E +EM G+ P VT N L++
Sbjct: 547 EILKEMLGKGLQPTIVTF------------------------------------NVLMNG 570
Query: 273 YARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
+ G +E ++ + ML + + ++NS++ + A + + M G PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
G +Y + A + E +F +MK + + + Y L+ + + + EA +V
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKG-KGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 389 KNM 391
M
Sbjct: 690 DQM 692
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 159/380 (41%), Gaps = 21/380 (5%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
C+ G++ EA + M P+ I+ T+++G + V + RK GL
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV--WKLIEVMKRK-GLK 313
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMG----LRNLVSWNTMLDGYMRSGEIEDALQ 182
N G+ +I + + + A F +M L + V + T++DG+ + G+I A +
Sbjct: 314 PNSYIYGS-IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 183 LFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
F E R + +++TA+I GF + +A + F EM G+ PD VT
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTM 294
VH M Q NV +LID + G ++ A ++ M L +
Sbjct: 433 KAGHMKDAFRVHNH-MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
++NSI+ G +G +EA+ + G D V+YT + A +G +D+ I +
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKG 411
M + + P I + L++ + G LE+ ++ M K PN SL+ +
Sbjct: 552 MLG-KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 412 EIGLAEKVMKYLVELDPGGD 431
+ A + K + G D
Sbjct: 611 NLKAATAIYKDMCSRGVGPD 630
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 163/356 (45%), Gaps = 26/356 (7%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNI---TLITLLSGCAHYPSPS 108
+T +++++ + +CR G+L + M+ ++PN+ ++I LL
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSW 164
+F + + G+ + D V T LID + K G++ +A F +M R++ +++
Sbjct: 337 E-AFSEMI-----RQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQL 220
++ G+ + G++ +A +LF E + +++++T LI G+ K H K A M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 221 SGVAPDYVTVXXXXX-XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
+G +P+ VT +H M + L+ N+ NS+++ + G I
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHE--MWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 280 EIARQV---FDGM-LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
E A ++ F+ L+ V++ +++ + +G D+A M +G +P V++
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 336 LTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
+ G++++G ++ N M + IAP + LV Y L+ A + K+M
Sbjct: 568 MNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 173/417 (41%), Gaps = 70/417 (16%)
Query: 70 GQLVEAASTFVRMRE----AEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGL 125
G L EA F +M V+ N+ L L C Y + +++ V ++G+
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC--YKTATAI----IVFREFPEVGV 242
Query: 126 DMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDAL 181
N V +I + G + A + M L+ +++S++T+++GY R GE++
Sbjct: 243 CWN-VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 182 QLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
+L + + N+ + ++IG + +A E F EM G+ PD V
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV--------- 352
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM--- 294
V +LID + + G I A + F M R +
Sbjct: 353 ---------------------------VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 295 -VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+++ +II GF G EA F+ M +G EPD V++T + AG + + R+ N
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTK 410
M + +P + Y L+D + G L+ A +++ M ++PN S++
Sbjct: 446 HMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 411 GEIGLAEKVMKYLVELDPGG----DSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
G I E+ +K + E + G Y L + Y G+ D A ++ + M +G++
Sbjct: 505 GNI---EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGA 114
TV +T+ + +C+SG++ +A M ++P +T L++G C H + G
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH----GMLEDGE 581
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSWNTMLDG 170
+ + G+ N + L+ Y N+ +A ++ M R + ++ ++ G
Sbjct: 582 KLLNWMLAKGIAPNATTFNS-LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 171 YMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+ ++ +++A LF E + + +++ LI GF+K+ +A E F +M+ G+A D
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 155/363 (42%), Gaps = 53/363 (14%)
Query: 41 NQSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG 100
++ F H+ T + +T+ I+ C+ G +VEA F M +EP+++T L++G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 101 CAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQM---G 157
Y + VH + + G N V T LID K G++DSA + +M G
Sbjct: 431 ---YCKAGHMKDAFRVHNHMIQAGCSPNVVTY-TTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 158 LR-NLVSWNTMLDGYMRSGEIEDALQLFDEFPV----RNAISWTALIGGFVKKDHHKQAL 212
L+ N+ ++N++++G +SG IE+A++L EF + +++T L+ + K +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 213 ECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDM 272
E +EM G+ P VT N L++
Sbjct: 547 EILKEMLGKGLQPTIVTF------------------------------------NVLMNG 570
Query: 273 YARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPD 328
+ G +E ++ + ML + + ++NS++ + A + + M G PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 329 GVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVI 388
G +Y + A + E +F +MK + + + Y L+ + + + EA +V
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKG-KGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 389 KNM 391
M
Sbjct: 690 DQM 692
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 159/380 (41%), Gaps = 21/380 (5%)
Query: 67 CRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGLD 126
C+ G++ EA + M P+ I+ T+++G + V + RK GL
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV--WKLIEVMKRK-GLK 313
Query: 127 MNDVKVGTALIDMYAKSGNVDSARLVFDQMG----LRNLVSWNTMLDGYMRSGEIEDALQ 182
N G+ +I + + + A F +M L + V + T++DG+ + G+I A +
Sbjct: 314 PNSYIYGS-IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 183 LFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXX 238
F E R + +++TA+I GF + +A + F EM G+ PD VT
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 239 XXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTM 294
VH M Q NV +LID + G ++ A ++ M L +
Sbjct: 433 KAGHMKDAFRVHNH-MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 295 VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNK 354
++NSI+ G +G +EA+ + G D V+YT + A +G +D+ I +
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 355 MKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMK---PNEVVLGSLLAACRTKG 411
M + + P I + L++ + G LE+ ++ M K PN SL+ +
Sbjct: 552 MLG-KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 412 EIGLAEKVMKYLVELDPGGD 431
+ A + K + G D
Sbjct: 611 NLKAATAIYKDMCSRGVGPD 630
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 163/356 (45%), Gaps = 26/356 (7%)
Query: 52 HTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNI---TLITLLSGCAHYPSPS 108
+T +++++ + +CR G+L + M+ ++PN+ ++I LL
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 109 SVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSW 164
+F + + G+ + D V T LID + K G++ +A F +M R++ +++
Sbjct: 337 E-AFSEMI-----RQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 165 NTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQL 220
++ G+ + G++ +A +LF E + +++++T LI G+ K H K A M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 221 SGVAPDYVTVXXXXX-XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
+G +P+ VT +H M + L+ N+ NS+++ + G I
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHE--MWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 280 EIARQV---FDGM-LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
E A ++ F+ L+ V++ +++ + +G D+A M +G +P V++
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 336 LTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
+ G++++G ++ N M + IAP + LV Y L+ A + K+M
Sbjct: 568 MNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 173/417 (41%), Gaps = 70/417 (16%)
Query: 70 GQLVEAASTFVRMRE----AEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARKLGL 125
G L EA F +M V+ N+ L L C Y + +++ V ++G+
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC--YKTATAI----IVFREFPEVGV 242
Query: 126 DMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTMLDGYMRSGEIEDAL 181
N V +I + G + A + M L+ +++S++T+++GY R GE++
Sbjct: 243 CWN-VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 182 QLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXX 237
+L + + N+ + ++IG + +A E F EM G+ PD V
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV--------- 352
Query: 238 XXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTM--- 294
V +LID + + G I A + F M R +
Sbjct: 353 ---------------------------VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 295 -VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFN 353
+++ +II GF G EA F+ M +G EPD V++T + AG + + R+ N
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 354 KMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTK 410
M + +P + Y L+D + G L+ A +++ M ++PN S++
Sbjct: 446 HMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 411 GEIGLAEKVMKYLVELDPGG----DSNYVLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
G I E+ +K + E + G Y L + Y G+ D A ++ + M +G++
Sbjct: 505 GNI---EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSG-CAHYPSPSSVSFGA 114
TV +T+ + +C+SG++ +A M ++P +T L++G C H + G
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH----GMLEDGE 581
Query: 115 TVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSWNTMLDG 170
+ + G+ N + L+ Y N+ +A ++ M R + ++ ++ G
Sbjct: 582 KLLNWMLAKGIAPNATTFNS-LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 171 YMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+ ++ +++A LF E + + +++ LI GF+K+ +A E F +M+ G+A D
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 179/424 (42%), Gaps = 42/424 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
VA TS I HC++ LV A F +M + PN++T L+ + +
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE---WFRKNGEMEKALE 395
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQ---MGLRNLVSWNTMLDGYM 172
+ LGL + V T +I + K + A +FD+ GL N+ NT+L
Sbjct: 396 FYKKMEVLGLTPSVFHVHT-IIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLC 454
Query: 173 RSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV 228
+ G+ ++A +L + R N +S+ ++ G ++ + A F + G+ P+
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 229 TVXXXXXXXXXXXXXXXXXWV--HRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
T V H MT +++ N V ++I+ + G AR++
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNH---MTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 287 DGMLHR-----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSH 341
M+ + +S+NSII GF G D A++ + M G P+ ++YT +
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 342 AGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEV 398
+D+ L + ++MK + + I YG L+D + + +E A + + + P++
Sbjct: 632 NNRMDQALEMRDEMKN-KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 399 VLGSLLAACRTKGE----IGLAEKVMKYLVELDPG----------GDSNYVLLSNIYA-- 442
+ SL++ R G + L +K++K + D G D N +L S +Y
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750
Query: 443 -AVG 445
AVG
Sbjct: 751 QAVG 754
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 150/343 (43%), Gaps = 19/343 (5%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V++ + + HCR + A F + E ++PNN T L+ GC +
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN---ALE 534
Query: 116 VHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSAR-LVFDQMGLRNL----VSWNTMLDG 170
V + +++N V V +I+ K G AR L+ + + + L +S+N+++DG
Sbjct: 535 VVNHMTSSNIEVNGV-VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 171 YMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPD 226
+ + GE++ A+ ++E N I++T+L+ G K + QALE EM+ GV D
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 227 YVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
+ ++ ++ L + + NSLI + G + A ++
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELL-EEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 287 DGMLHRTMV----SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHA 342
ML + ++ ++I G +G A + MQ G PD + YT + S
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 343 GLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL 385
G + +++F +MK+ + P + Y ++ + R G L+EA
Sbjct: 773 GQFVKVVKMFEEMKK-NNVTPNVLIYNAVIAGHYREGNLDEAF 814
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 122/295 (41%), Gaps = 14/295 (4%)
Query: 105 PSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNLVSW 164
P+P + + + A+ G ++N + L++ Y+K D A + +QM +++ +
Sbjct: 139 PTPMASVLVSKLVDSAKSFGFEVNS-RAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPF 197
Query: 165 ----NTMLDGYMRSGEIEDALQLFDEFPV----RNAISWTALIGGFVKKDHHKQALECFR 216
N L ++ + +A +L+ + ++ L+ ++++ +ALE
Sbjct: 198 FPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 217 EMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC 276
G PD + + R + + + S+I +
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 277 GCIEIARQVFDGMLH----RTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSY 332
G ++ A ++ D ML +V+ S+I G N AL F+ M+KEG P+ V++
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377
Query: 333 TGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDV 387
+ + G +++ L + KM+ V + P + H ++ + + + EEAL +
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKME-VLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 156/351 (44%), Gaps = 19/351 (5%)
Query: 54 DPTVAWTSSIAH-HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSF 112
+P++ SS+ + +C ++ +A + +M E P+ IT TL+ G + S
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV- 210
Query: 113 GATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWNTML 168
A V ++ G N V G +++ K G+ D A + ++M ++V +NT++
Sbjct: 211 -ALVDRMVQR-GCQPNLVTYGV-VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 169 DGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVA 224
D + ++DAL LF E + N +++++LI A + +M +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 225 PDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQ 284
P+ VT ++ M + S+ ++ NSL++ + ++ A+Q
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYD-DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 285 VFDGMLHRT----MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACS 340
+F+ M+ + +V++N++I GF + ++ F M G D V+YT +
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 341 HAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
H G D ++F +M + P I Y L+D G+LE+AL+V M
Sbjct: 447 HDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 171/410 (41%), Gaps = 75/410 (18%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + + I C+ + +A + F M + PN +T +L+S Y S S
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS---- 315
Query: 116 VHAYARKLGLDMNDVKVG------TALIDMYAKSGNVDSARLVFDQMGLR----NLVSWN 165
+L DM + K+ ALID + K G A ++D M R ++ ++N
Sbjct: 316 ------QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 166 TMLDGYMRSGEIEDALQLF------DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
++++G+ ++ A Q+F D FP + +++ LI GF K + E FREM
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFP--DVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G+ D VT +LI G
Sbjct: 428 HRGLVGDTVTY------------------------------------TTLIQGLFHDGDC 451
Query: 280 EIARQVFDGMLHR----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
+ A++VF M+ +++++ ++ G NG ++AL F+ MQK + D YT
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 336 LTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM---- 391
+ AG +D+G +F + ++ + P + Y ++ L+EA ++K M
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 392 PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDSNYV-LLSNI 440
P+ PN +L+ A G+ + ++++ + GD++ + L++N+
Sbjct: 571 PL-PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 619
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 153/356 (42%), Gaps = 34/356 (9%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + + I C + +A + F M + PN +T +L+ +Y S S
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS---- 311
Query: 116 VHAYARKLGLDMNDVKVG------TALIDMYAKSGNVDSARLVFDQMGLR----NLVSWN 165
+L DM + K+ +ALID + K G + A ++D+M R ++ +++
Sbjct: 312 ------RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 166 TMLDGYMRSGEIEDALQLF------DEFPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
++++G+ +++A +F D FP N +++ LI GF K + +E FREM
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFP--NVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 220 LSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCI 279
G+ + VT V + M D + ++ + L+D G +
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFK-QMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 280 EIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGA 335
E A VF+ + M ++N +I G G ++ F S+ +G +P+ V+YT
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 336 LTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNM 391
++ GL +E +F +MK + P Y L+ + R G + ++I+ M
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 173/401 (43%), Gaps = 35/401 (8%)
Query: 42 QSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGC 101
Q+ + HN ++ I CR QL A + +M + EP+ +TL +LL+G
Sbjct: 108 QNLGISHNL------YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF 161
Query: 102 AHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR-- 159
H + +S ++ ++G + T + ++ + ++ LV D+M ++
Sbjct: 162 CH---GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV-DRMVVKGC 217
Query: 160 --NLVSWNTMLDGYMRSGEIEDALQLFDEFPVRN----AISWTALIGGFVKKDHHKQALE 213
+LV++ +++G + G+I+ AL L + + + +I + AL
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 214 CFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXW--VHRLV--MTQDSLKDNVRVSNSL 269
F EM G+ P+ VT W RL+ M + + NV ++L
Sbjct: 278 LFTEMDNKGIRPNVVT-----YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 270 IDMYARCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGF 325
ID + + G + A +++D M+ R++ +++S+I GF + DEA F M +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 326 EPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEAL 385
P+ V+Y + A +DEG+ +F +M + R + Y L+ + +A + A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 386 DVIKNMP---MKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
V K M + P+ + LL G++ A V +YL
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 140/315 (44%), Gaps = 20/315 (6%)
Query: 39 NTNQSFSL--RHNTKHTDP-TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLI 95
N N + +L + K P V + S I C G+ +A+ M E ++ PN +T
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 96 TLLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQ 155
L+ + + ++ K +D D+ ++LI+ + +D A+ +F+
Sbjct: 331 ALIDA---FVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 156 M----GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDH 207
M N+V++NT++ G+ ++ +++ ++LF E R N +++T LI GF +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 208 HKQALECFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSN 267
A F++M GV PD +T V + + ++ ++ N
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE-YLQRSKMEPDIYTYN 505
Query: 268 SLIDMYARCGCIEIARQVFDGM----LHRTMVSWNSIIVGFAANGLADEALSFFNSMQKE 323
+I+ + G +E +F + + +V++ +++ GF GL +EA + F M++E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 324 GFEPDGVSYTGALTA 338
G PD +Y + A
Sbjct: 566 GPLPDSGTYNTLIRA 580
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 11/247 (4%)
Query: 191 NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVTVXXXXXXXXX-XXXXXXXXWV 249
N +++ LI F ++ AL +M G PD VT+ V
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 250 HRLV---MTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAA 306
++V DS N + A + R V G +V++ ++ G
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCK 233
Query: 307 NGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIE 366
G D ALS M++ EP V Y + A + +++ L +F +M + I P +
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN-KGIRPNVV 292
Query: 367 HYGCLVDLYSRAGRLEEALDVIKNM---PMKPNEVVLGSLLAACRTKGEIGLAEKVMKYL 423
Y L+ GR +A ++ +M + PN V +L+ A +G++ AEK+ +
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 424 VE--LDP 428
++ +DP
Sbjct: 353 IKRSIDP 359
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 154/356 (43%), Gaps = 55/356 (15%)
Query: 58 AWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVH 117
++T I CR +L A S +M + EP+ +T +LL G + + + ++
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG---FCLVNRIGDAFSLV 164
Query: 118 AYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLRNL----VSWNTMLDGYMR 173
K G + N V V LID K+G ++ A + ++M + L V++NT+L G
Sbjct: 165 ILMVKSGYEPN-VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 174 SGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYVT 229
SG DA ++ + R + +++TALI FVK+ + +A E ++EM S V P+ VT
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 230 VXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM 289
NS+I+ G + A++ FD M
Sbjct: 284 Y------------------------------------NSIINGLCMHGRLYDAKKTFDLM 307
Query: 290 LHR----TMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLI 345
+ +V++N++I GF + DE + F M EGF D +Y + G +
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 346 DEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPMKPNEVVLG 401
L IF M RR+ P I + L+ G +E AL +K M+ +E +G
Sbjct: 368 RVALDIFCWMVS-RRVTPDIITHCILLHGLCVNGEIESAL--VKFDDMRESEKYIG 420
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 132/325 (40%), Gaps = 41/325 (12%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V + + I C++G+L A M + + + +T TLL+G + S
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD------ 229
Query: 116 VHAYARKLGLDMN------DVKVGTALIDMYAKSGNVDSARLVFDQMGLR----NLVSWN 165
A ++ DM DV TALID++ K GN+D A+ ++ +M N V++N
Sbjct: 230 ----AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 166 TMLDGYMRSGEIEDALQLFDE------FPVRNAISWTALIGGFVKKDHHKQALECFREMQ 219
++++G G + DA + FD FP N +++ LI GF K + ++ F+ M
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFP--NVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 220 LSGVAPDYVT----VXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYAR 275
G D T + W+ +T D + + + ++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN---- 399
Query: 276 CGCIEIARQVFDGMLHRT----MVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVS 331
G IE A FD M +V++N +I G ++A F + EG +PD +
Sbjct: 400 -GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 332 YTGALTACSHAGLIDEGLRIFNKMK 356
YT + G E + +MK
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMK 483
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 40/211 (18%)
Query: 53 TDPT-VAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP------ 105
DP V + S I C G+L +A TF M PN +T TL+SG +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 106 -----------SPSSVSFGATVHAYAR----KLGLDM----------NDVKVGTALIDMY 140
+ ++ +H Y + ++ LD+ D+ L+
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 141 AKSGNVDSARLVFDQM----GLRNLVSWNTMLDGYMRSGEIEDALQLFDEFPVR----NA 192
+G ++SA + FD M +V++N M+ G ++ ++E A +LF PV +A
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 193 ISWTALIGGFVKKDHHKQALECFREMQLSGV 223
++T +I G K ++A E R M+ G+
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 19/304 (6%)
Query: 129 DVKVGTALIDMYAKSGNVDSA-RLVFDQMGLRNLVSWNT---MLDGYMRSGEIEDALQLF 184
DV + +I + GN+D A + V + LR+ + T ++ GY +SG++ +L++F
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 185 DEFP----VRNAISWTALIGGFVKKDHHKQALECFREMQLSGV-APDYVTVXXXXXXXXX 239
D V ++ LI G V+K ++A+E EM L+GV A ++
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASV 672
Query: 240 XXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGM----LHRTMV 295
+ RL + L ++ +L+ + G ++ A V M + R
Sbjct: 673 GDTGKAFEYFTRL--QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 296 SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKM 355
+N +I G+A G EA M+KEG +PD +YT ++ACS AG ++ + +M
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 356 KRVRRIAPRIEHYGCLVDLYSRAGRLEEAL---DVIKNMPMKPNEVVLGSLLAACRTKGE 412
+ + + P I+ Y L+ ++RA E+AL + +K M +KP++ V LL + ++
Sbjct: 791 EAL-GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 849
Query: 413 IGLA 416
I A
Sbjct: 850 IAEA 853
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/505 (19%), Positives = 194/505 (38%), Gaps = 95/505 (18%)
Query: 47 RHNTKHTDPTVAWTSSIAHHCRSGQ-LVEAASTFVRMREAEVEPNNITLITLLSGCAH-- 103
R + PT +S+ H G+ + EA S +M+E +E + +T ++ G +
Sbjct: 334 RMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAG 393
Query: 104 ---------------YPSPSSVSFGATVHAYARKLGLDMND--------------VKVGT 134
+ + ++ +G ++A+ + ++ + + +
Sbjct: 394 HAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYH 453
Query: 135 ALIDMYAKSGNVDSARLVFDQMG----LRNLVSWNTMLDGYMRSGEIEDALQ----LFDE 186
++D Y + +VF ++ +V++ +++ Y + G+I AL+ + +E
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE 513
Query: 187 FPVRNAISWTALIGGFVKKDHHKQALECFREMQLSGVAPDYV------------------ 228
N +++ +I GFVK A F +M G+ PD +
Sbjct: 514 GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA 573
Query: 229 --TVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVF 286
TV +H + D +R S + DM RCGC+ F
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD-----MRRSLEVFDMMRRCGCVPTV-HTF 627
Query: 287 DGMLH-----RTMV-------------------SWNSIIVGFAANGLADEALSFFNSMQK 322
+G+++ R M ++ I+ G+A+ G +A +F +Q
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Query: 323 EGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLE 382
EG + D +Y L AC +G + L + +M R I Y L+D ++R G +
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS-ARNIPRNSFVYNILIDGWARRGDVW 746
Query: 383 EALDVIKNMP---MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGD-SNYVLLS 438
EA D+I+ M +KP+ S ++AC G++ A + ++ + L + Y L
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 439 NIYAAVGKWDGANKVRRAMKDRGIR 463
+A + A MK GI+
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIK 831
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/447 (20%), Positives = 174/447 (38%), Gaps = 60/447 (13%)
Query: 63 IAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGATVHAYARK 122
+ + R G + A TF RMR A +P+S + + +HAYA
Sbjct: 316 VKFYGRRGDMHRARETFERMR------------------ARGITPTSRIYTSLIHAYA-- 355
Query: 123 LGLDMNDV-----KVGTALIDM-----------YAKSGNVDSARLVFDQM----GLRNLV 162
+G DM++ K+ I+M ++K+G+ ++A FD+ N
Sbjct: 356 VGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNAS 415
Query: 163 SWNTMLDGYMRSGEIEDALQLFDEFPVRNAIS----WTALIGGFVKKDHHKQALECFREM 218
+ ++ + ++ +E A L E + + ++ G+ K+ L F+ +
Sbjct: 416 IYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL 475
Query: 219 QLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGC 278
+ G P VT V R VM ++ +K N++ + +I+ + +
Sbjct: 476 KECGFTPTVVTYGCLINLYTKVGKISKALEVSR-VMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 279 IEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTG 334
A VF+ M+ M + +N+II F G D A+ MQK P ++
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 335 ALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKNMPM- 393
+ + +G + L +F+ M+R + P + + L++ ++E+A++++ M +
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 394 --KPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGDS----NYVLLSNIYAAVGKW 447
NE ++ + G+ G K +Y L G Y L G+
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTG---KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 448 DGANKVRRAMKDRGIRKKPGFSSIEID 474
A V + M R I + +I ID
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILID 737
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 164/402 (40%), Gaps = 44/402 (10%)
Query: 97 LLSGCAHYPSPSSVSFGATVHAYARKLGLDMNDVK----------------VGTALIDMY 140
++S PS FG V Y R+ DM+ + + T+LI Y
Sbjct: 297 VISAFEKISKPSRTEFGLMVKFYGRRG--DMHRARETFERMRARGITPTSRIYTSLIHAY 354
Query: 141 AKSGNVDSARLVFDQM---GLR-NLVSWNTMLDGYMRSGEIEDALQLFDE----FPVRNA 192
A ++D A +M G+ +LV+++ ++ G+ ++G E A FDE NA
Sbjct: 355 AVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA 414
Query: 193 ISWTALIGGFVKKDHHKQALECFREMQLSGV-APDYVTVXXXXXXXXXXXXXXXXXWVHR 251
+ +I + + ++A REM+ G+ AP + R
Sbjct: 415 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 252 LVMTQDSLKDNVRVSNSLIDMYARCGCI----EIARQVFDGMLHRTMVSWNSIIVGFAAN 307
L + V LI++Y + G I E++R + + + + +++ +I GF
Sbjct: 475 L--KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 308 GLADEALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEH 367
A + F M KEG +PD + Y ++A G +D ++ +M+++R P
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH-RPTTRT 591
Query: 368 YGCLVDLYSRAG---RLEEALDVIKNMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLV 424
+ ++ Y+++G R E D+++ P L+ K ++ EK ++ L
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM---EKAVEILD 648
Query: 425 ELDPGG----DSNYVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
E+ G + Y + YA+VG A + +++ G+
Sbjct: 649 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 269 LIDMYARCGCIEIARQVFDGMLHRTMVS----WNSIIVGFAANGLADEALSFFNSMQKEG 324
++ Y R G + AR+ F+ M R + + S+I +A DEALS M++EG
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 325 FEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
E V+Y+ + S AG + F++ KR+ + YG ++ + + +E A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL-NASIYGKIIYAHCQTCNMERA 433
Query: 385 LDVIKNM-------PMKPNEVVL-GSLLAACRTKGEIGLAEKVMKYLVE--LDPGGDSNY 434
+++ M P+ ++ G + A KG + V K L E P Y
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV-----VFKRLKECGFTPT-VVTY 487
Query: 435 VLLSNIYAAVGKWDGANKVRRAMKDRGIR 463
L N+Y VGK A +V R MK+ G++
Sbjct: 488 GCLINLYTKVGKISKALEVSRVMKEEGVK 516
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 147/345 (42%), Gaps = 61/345 (17%)
Query: 56 TVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYPSPSSVSFGAT 115
V T I C++ +V A RM++ + PN +T +L++G G
Sbjct: 48 VVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKS--------GRL 99
Query: 116 VHAYARKLGLDMN----DVKVGTALIDMYAKSGN---VDSARLVFDQMGLR-NLVSWNTM 167
A R +D +V +ALID YAK G VDS + QM + N+ +++++
Sbjct: 100 ADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 159
Query: 168 LDGYMRSGEIEDALQLFDEFPVR----NAISWTALIGGFVKKDHHKQALECFREMQLSGV 223
+ G +++A+++ D + N ++++ L GF K ++ +M GV
Sbjct: 160 IYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
Query: 224 APDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARCGCIEIAR 283
A + V+ N+LI Y + G I++A
Sbjct: 220 AANTVS------------------------------------CNTLIKGYFQAGKIDLAL 243
Query: 284 QVFDGMLHRTMV----SWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGALTAC 339
VF M ++ S+N ++ G ANG ++ALS F MQK + D ++YT +
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 340 SHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
A ++ E +F K+K +R+ P + Y ++ +RAG EA
Sbjct: 304 CKACMVKEAYDLFYKLK-FKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 19/284 (6%)
Query: 160 NLVSWNTMLDGYMRSGEIEDALQLFDEFPV----RNAISWTALIGGFVKKDHHKQALECF 215
++V+ +++++G+ S I+DA+ + + R+ + T LI K ALE
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 216 REMQLSGVAPDYVTVXXXXX-XXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYA 274
+ M+ G++P+ VT +H M + NV ++LID YA
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHE--MDSKKINPNVITFSALIDAYA 129
Query: 275 RCGCIEIARQVFDGMLHRTM----VSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGV 330
+ G + V+ M+ ++ +++S+I G + DEA+ + M +G P+ V
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 331 SYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEALDVIKN 390
+Y+ + +D+G+++ + M + R +A L+ Y +AG+++ AL V
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQ-RGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 248
Query: 391 MP---MKPN----EVVLGSLLAACRTKGEIGLAEKVMKYLVELD 427
M + PN +VL L A + + E + K +LD
Sbjct: 249 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLD 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 253 VMTQDSLKDNVRVSNSLIDMYARCGCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADE 312
++T SL + +SNS+ D + +A Q+ + R +V +I N L
Sbjct: 13 IVTASSLVNGFCLSNSIKD------AVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVP 66
Query: 313 ALSFFNSMQKEGFEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLV 372
AL M+ G P+ V+Y+ +T +G + + R ++M ++I P + + L+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDS-KKINPNVITFSALI 125
Query: 373 DLYSRAGRLEEALDVIK---NMPMKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPG 429
D Y++ G+L + V K M + PN SL+ + A K++ ++ G
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS--KG 183
Query: 430 GDSN---YVLLSNIYAAVGKWDGANKVRRAMKDRGI 462
N Y L+N + + D K+ M RG+
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 196/469 (41%), Gaps = 119/469 (25%)
Query: 55 PTVAWTSSIAH-HCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGCAHYP-------- 105
P++ +S+ + C ++ EA + +M E +P+ +T TL+ G +
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 106 ---------SPSSVSFGATVHAYARK----LGLDM----------NDVKVGTALIDMYAK 142
P V++GA ++ ++ L L++ DV + +ID K
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 143 SGNVDSARLVFDQM---GLR------------------------------------NLVS 163
++D A +F++M G++ +LV
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 164 WNTMLDGYMRSGEIEDALQLFDE-------FPVRNAISWTALIGGFVKKDHHKQALECFR 216
+N ++D +++ G++ +A +L+DE FP + +++ LI GF K ++ +E FR
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP--DVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 217 EMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVRVSNSLIDMYARC 276
EM G+ + VT +H +D DN ++
Sbjct: 381 EMSQRGLVGNTVT---------------YTTLIHGFFQARDC--DNAQM----------- 412
Query: 277 GCIEIARQVFDGMLHRTMVSWNSIIVGFAANGLADEALSFFNSMQKEGFEPDGVSYTGAL 336
+ +Q+ +H ++++N ++ G NG + AL F MQK + D V+YT +
Sbjct: 413 ----VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 337 TACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA----LDVIKNMP 392
A AG +++G +F + ++ + P + Y ++ + R G EEA +++ ++ P
Sbjct: 469 EALCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 393 MKPNEVVLGSLLAACRTKGEIGLAEKVMKYLVELDPGGD-SNYVLLSNI 440
+ PN +L+ A G+ + +++K + GD S + L++N+
Sbjct: 528 L-PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM 575
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 167/392 (42%), Gaps = 36/392 (9%)
Query: 42 QSFSLRHNTKHTDPTVAWTSSIAHHCRSGQLVEAASTFVRMREAEVEPNNITLITLLSGC 101
Q+ + HN ++ I + CR QL A + +M + P+ +TL +LL+G
Sbjct: 102 QNLGISHNL------YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGF 155
Query: 102 AHYPSPSSVSFGATVHAYARKLGLDMNDVKVGTALIDMYAKSGNVDSARLVFDQMGLR-- 159
H + +S + ++G + V T + ++ + ++ LV ++M ++
Sbjct: 156 CH---GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV-ERMVVKGC 211
Query: 160 --NLVSWNTMLDGYMRSGEIEDALQLFDEFPV----RNAISWTALIGGFVKKDHHKQALE 213
+LV++ +++G + GE + AL L ++ + + + +I G K H A +
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 214 CFREMQLSGVAPDYVTVXXXXXXXXXXXXXXXXXWVHRLVMTQDSLKDNVR----VSNSL 269
F +M+ G+ PD T W + D L+ N+ N+L
Sbjct: 272 LFNKMETKGIKPDVFT-----YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 270 IDMYARCGCIEIARQVFDGMLHRT-----MVSWNSIIVGFAANGLADEALSFFNSMQKEG 324
ID + + G + A +++D M+ +V++N++I GF +E + F M + G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 325 FEPDGVSYTGALTACSHAGLIDEGLRIFNKMKRVRRIAPRIEHYGCLVDLYSRAGRLEEA 384
+ V+YT + A D +F +M + P I Y L+D G +E A
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-DGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 385 LDVIKNMP---MKPNEVVLGSLLAACRTKGEI 413
L V + M MK + V +++ A G++
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477