Miyakogusa Predicted Gene
- Lj3g3v0822530.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0822530.2 Non Chatacterized Hit- tr|I1LNZ6|I1LNZ6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.31248
PE,77.56,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; RRM,RNA
recognition motif domain; ZF_C3H1,Zinc fing,CUFF.41505.2
(710 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51950.2 | Symbols: | Zinc finger (CCCH-type) family protein... 308 8e-84
AT3G51950.1 | Symbols: | Zinc finger (CCCH-type) family protein... 308 8e-84
AT5G12440.3 | Symbols: | CCCH-type zinc fingerfamily protein wi... 291 8e-79
AT5G12440.2 | Symbols: | CCCH-type zinc fingerfamily protein wi... 291 8e-79
AT5G12440.1 | Symbols: | CCCH-type zinc fingerfamily protein wi... 291 8e-79
AT3G21100.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 259 5e-69
AT3G21100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 229 5e-60
AT3G63450.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 218 2e-56
AT3G63450.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 218 2e-56
AT3G63450.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 218 2e-56
AT1G51520.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 196 6e-50
AT1G51520.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 194 2e-49
AT2G05160.1 | Symbols: | CCCH-type zinc fingerfamily protein wi... 150 4e-36
AT3G52980.1 | Symbols: | Zinc finger (CCCH-type) family protein... 117 4e-26
AT1G51530.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 80 5e-15
AT1G51530.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 70 6e-12
>AT3G51950.2 | Symbols: | Zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE LENGTH=540
Length = 540
Score = 308 bits (789), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 224/505 (44%), Positives = 270/505 (53%), Gaps = 96/505 (19%)
Query: 213 GSVHRRSCS-VNDACMGSEDTNSGFGWKPCLYFARGYCKNGTSCRFLHGDAEGGAMVGSP 271
GSVH RS S V D D++ GFG PC YFARG+CKNG SCRF+H D G +VGSP
Sbjct: 125 GSVHARSGSCVLDGLGYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHSDG-GADLVGSP 183
Query: 272 SKIEMMDQCHELLRSKTIQPPRLAAASQLMGSSTFP-YSHKCXXXXXXXXXXXXXXXXXX 330
S+IE LLRS ++ PPRLA M S+ P +S K
Sbjct: 184 SRIE-------LLRSNSV-PPRLA--HHFMTRSSLPSFSTK------GVNLQQNDVQRAA 227
Query: 331 XXXXXXEDLHKFGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYG 390
++L K GR R ER + S M PASRQIYLTFPADS FREEDVSNYFS +G
Sbjct: 228 AALMIGDELQKLGRWRPERIDLS----AMACPASRQIYLTFPADSRFREEDVSNYFSTFG 283
Query: 391 PVQDVRIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDK-KL 449
PVQDVRIPYQQKRMFGFVTF YPETVK IL+KGNPHFVCD+RVLVKPYKEKGKVPDK +
Sbjct: 284 PVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRT 343
Query: 450 QQLDRGDFSPCGTPTGLDARDPFDLQVGGRMCY-NTQDMLLRRKLEEQADFQQALELQSR 508
Q + S PTGLD+ P D+ +GGR Y NTQD+L R K EE + LELQSR
Sbjct: 344 NQTTERELS----PTGLDS-SPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSR 392
Query: 509 RLMGLQLLDIKKQQQRAFSIGSPIPSPNHSPSMFNQNLVPSPFHNSFESQEENGSSSVPA 568
RLM LQLLD+KK F + S P+ HSP+ F+Q+L+ SP S +E +G
Sbjct: 393 RLMNLQLLDVKKH----FQLNS--PTNIHSPNPFSQSLI-SPRPLSVIKREYDGGEKGKG 445
Query: 569 STPSIPVDQKLMQQDAKISVGKEVTIXXXXXXXXXXXXXXXXHEDLDLQECLEHILPDSP 628
S+ D + ++L E LE LPDSP
Sbjct: 446 SSKEGSDD-----------------------------------DTMNLPERLEDSLPDSP 470
Query: 629 FASLTKAIGDYMTAFSNGPIEXXXXXXXXXXXXXXXXXXXLLPEASALDMGSYKSYNCQV 688
FAS ++ F++ L + S+ S+N Q+
Sbjct: 471 FASPAH----HLLLFADSADNNGSDLWSPSSDNDDNSTPSTLSD-------SFNSFNYQM 519
Query: 689 PRFSSGHGTIGMLAGTGGP---IGI 710
PR + IGML G GGP +GI
Sbjct: 520 PRLPA----IGMLPGRGGPTCRVGI 540
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 60/63 (95%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MDGYEATRIV SRIQ+LDPENASKIMGLLLLQDHGEKEMIRLA GPE+LVHSVI+ A+KE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGL 63
LGL
Sbjct: 61 LGL 63
>AT3G51950.1 | Symbols: | Zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE LENGTH=540
Length = 540
Score = 308 bits (789), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 224/505 (44%), Positives = 270/505 (53%), Gaps = 96/505 (19%)
Query: 213 GSVHRRSCS-VNDACMGSEDTNSGFGWKPCLYFARGYCKNGTSCRFLHGDAEGGAMVGSP 271
GSVH RS S V D D++ GFG PC YFARG+CKNG SCRF+H D G +VGSP
Sbjct: 125 GSVHARSGSCVLDGLGYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHSDG-GADLVGSP 183
Query: 272 SKIEMMDQCHELLRSKTIQPPRLAAASQLMGSSTFP-YSHKCXXXXXXXXXXXXXXXXXX 330
S+IE LLRS ++ PPRLA M S+ P +S K
Sbjct: 184 SRIE-------LLRSNSV-PPRLA--HHFMTRSSLPSFSTK------GVNLQQNDVQRAA 227
Query: 331 XXXXXXEDLHKFGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYG 390
++L K GR R ER + S M PASRQIYLTFPADS FREEDVSNYFS +G
Sbjct: 228 AALMIGDELQKLGRWRPERIDLS----AMACPASRQIYLTFPADSRFREEDVSNYFSTFG 283
Query: 391 PVQDVRIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDK-KL 449
PVQDVRIPYQQKRMFGFVTF YPETVK IL+KGNPHFVCD+RVLVKPYKEKGKVPDK +
Sbjct: 284 PVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRT 343
Query: 450 QQLDRGDFSPCGTPTGLDARDPFDLQVGGRMCY-NTQDMLLRRKLEEQADFQQALELQSR 508
Q + S PTGLD+ P D+ +GGR Y NTQD+L R K EE + LELQSR
Sbjct: 344 NQTTERELS----PTGLDS-SPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSR 392
Query: 509 RLMGLQLLDIKKQQQRAFSIGSPIPSPNHSPSMFNQNLVPSPFHNSFESQEENGSSSVPA 568
RLM LQLLD+KK F + S P+ HSP+ F+Q+L+ SP S +E +G
Sbjct: 393 RLMNLQLLDVKKH----FQLNS--PTNIHSPNPFSQSLI-SPRPLSVIKREYDGGEKGKG 445
Query: 569 STPSIPVDQKLMQQDAKISVGKEVTIXXXXXXXXXXXXXXXXHEDLDLQECLEHILPDSP 628
S+ D + ++L E LE LPDSP
Sbjct: 446 SSKEGSDD-----------------------------------DTMNLPERLEDSLPDSP 470
Query: 629 FASLTKAIGDYMTAFSNGPIEXXXXXXXXXXXXXXXXXXXLLPEASALDMGSYKSYNCQV 688
FAS ++ F++ L + S+ S+N Q+
Sbjct: 471 FASPAH----HLLLFADSADNNGSDLWSPSSDNDDNSTPSTLSD-------SFNSFNYQM 519
Query: 689 PRFSSGHGTIGMLAGTGGP---IGI 710
PR + IGML G GGP +GI
Sbjct: 520 PRLPA----IGMLPGRGGPTCRVGI 540
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 60/63 (95%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MDGYEATRIV SRIQ+LDPENASKIMGLLLLQDHGEKEMIRLA GPE+LVHSVI+ A+KE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGL 63
LGL
Sbjct: 61 LGL 63
>AT5G12440.3 | Symbols: | CCCH-type zinc fingerfamily protein with
RNA-binding domain | chr5:4035891-4038604 REVERSE
LENGTH=650
Length = 650
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 178/396 (44%), Positives = 238/396 (60%), Gaps = 44/396 (11%)
Query: 153 GGSDSVDEFQLQDQLAFLNDGPPSLVQKNSDLFYPQSELXXXXXXXXXXXXLFASYGGWG 212
GG+D +D+ QL D L+FL+D K DL P L ++ G
Sbjct: 162 GGADLLDDQQLNDCLSFLDDS----CSKTEDLVDPSIPLD------------YSVDGDGE 205
Query: 213 GSVHRRSCSVNDACMGSEDTNSGFGWKPCLYFARGYCKNGTSCRFLHG----DAEGGAMV 268
+HRRS S DA S D G G KPC+YF+RG CKNG SC+F+HG + +G +V
Sbjct: 206 THLHRRSFSC-DASFVSGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIV 264
Query: 269 G-SPSKIE-MMDQCHELLRSK-TIQPPRLAAASQLMGSS-TFPYSHKCXXXXXXXXXXXX 324
SP K+E + Q E++R K Q RLA SQ++G + PY +
Sbjct: 265 ADSPRKMENFVRQHEEMMRLKLAYQQQRLA--SQILGRAPQLPYEKR------MDFLLQQ 316
Query: 325 XXXXXXXXXXXXEDLHKFGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSN 384
E RLER E +++ N ASRQIYLTFPADSTF++EDV+
Sbjct: 317 HAQRDGGLPFGDERFWSSSPGRLERMELAMHLGDQSNSASRQIYLTFPADSTFKDEDVAT 376
Query: 385 YFSIYGPVQDVRIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKV 444
YFS++G VQDVRIPYQQKRMFGFV+FA+PETVK++L++GNPHF+CD+RVLVKPYKEKGKV
Sbjct: 377 YFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKV 436
Query: 445 PDKK-----LQQLDRGDFSPCGTPTGLDARDPFDLQVGGRMCYNTQDMLLRRKLEEQADF 499
DKK QQ++RG++SPC +P+G+D R+ D +G +M Y ++M +RRK+ EQAD
Sbjct: 437 LDKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREM-MRRKI-EQADL 494
Query: 500 QQALELQSRRLMGLQLLDIKK----QQQRAFSIGSP 531
+A+EL+ RR + LQL + K R+FS+GSP
Sbjct: 495 LRAIELERRRFINLQLPEFKNSVTLNHHRSFSVGSP 530
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 45/63 (71%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MD +AT ++ ++I++L+P+ A KI+G LLL D G+++++ LA GPES++ S I +
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60
Query: 61 LGL 63
LG+
Sbjct: 61 LGI 63
>AT5G12440.2 | Symbols: | CCCH-type zinc fingerfamily protein with
RNA-binding domain | chr5:4035891-4038604 REVERSE
LENGTH=650
Length = 650
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 178/396 (44%), Positives = 238/396 (60%), Gaps = 44/396 (11%)
Query: 153 GGSDSVDEFQLQDQLAFLNDGPPSLVQKNSDLFYPQSELXXXXXXXXXXXXLFASYGGWG 212
GG+D +D+ QL D L+FL+D K DL P L ++ G
Sbjct: 162 GGADLLDDQQLNDCLSFLDDS----CSKTEDLVDPSIPLD------------YSVDGDGE 205
Query: 213 GSVHRRSCSVNDACMGSEDTNSGFGWKPCLYFARGYCKNGTSCRFLHG----DAEGGAMV 268
+HRRS S DA S D G G KPC+YF+RG CKNG SC+F+HG + +G +V
Sbjct: 206 THLHRRSFSC-DASFVSGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIV 264
Query: 269 G-SPSKIE-MMDQCHELLRSK-TIQPPRLAAASQLMGSS-TFPYSHKCXXXXXXXXXXXX 324
SP K+E + Q E++R K Q RLA SQ++G + PY +
Sbjct: 265 ADSPRKMENFVRQHEEMMRLKLAYQQQRLA--SQILGRAPQLPYEKR------MDFLLQQ 316
Query: 325 XXXXXXXXXXXXEDLHKFGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSN 384
E RLER E +++ N ASRQIYLTFPADSTF++EDV+
Sbjct: 317 HAQRDGGLPFGDERFWSSSPGRLERMELAMHLGDQSNSASRQIYLTFPADSTFKDEDVAT 376
Query: 385 YFSIYGPVQDVRIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKV 444
YFS++G VQDVRIPYQQKRMFGFV+FA+PETVK++L++GNPHF+CD+RVLVKPYKEKGKV
Sbjct: 377 YFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKV 436
Query: 445 PDKK-----LQQLDRGDFSPCGTPTGLDARDPFDLQVGGRMCYNTQDMLLRRKLEEQADF 499
DKK QQ++RG++SPC +P+G+D R+ D +G +M Y ++M +RRK+ EQAD
Sbjct: 437 LDKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREM-MRRKI-EQADL 494
Query: 500 QQALELQSRRLMGLQLLDIKK----QQQRAFSIGSP 531
+A+EL+ RR + LQL + K R+FS+GSP
Sbjct: 495 LRAIELERRRFINLQLPEFKNSVTLNHHRSFSVGSP 530
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 45/63 (71%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MD +AT ++ ++I++L+P+ A KI+G LLL D G+++++ LA GPES++ S I +
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60
Query: 61 LGL 63
LG+
Sbjct: 61 LGI 63
>AT5G12440.1 | Symbols: | CCCH-type zinc fingerfamily protein with
RNA-binding domain | chr5:4035891-4038604 REVERSE
LENGTH=650
Length = 650
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 178/396 (44%), Positives = 238/396 (60%), Gaps = 44/396 (11%)
Query: 153 GGSDSVDEFQLQDQLAFLNDGPPSLVQKNSDLFYPQSELXXXXXXXXXXXXLFASYGGWG 212
GG+D +D+ QL D L+FL+D K DL P L ++ G
Sbjct: 162 GGADLLDDQQLNDCLSFLDDS----CSKTEDLVDPSIPLD------------YSVDGDGE 205
Query: 213 GSVHRRSCSVNDACMGSEDTNSGFGWKPCLYFARGYCKNGTSCRFLHG----DAEGGAMV 268
+HRRS S DA S D G G KPC+YF+RG CKNG SC+F+HG + +G +V
Sbjct: 206 THLHRRSFSC-DASFVSGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIV 264
Query: 269 G-SPSKIE-MMDQCHELLRSK-TIQPPRLAAASQLMGSS-TFPYSHKCXXXXXXXXXXXX 324
SP K+E + Q E++R K Q RLA SQ++G + PY +
Sbjct: 265 ADSPRKMENFVRQHEEMMRLKLAYQQQRLA--SQILGRAPQLPYEKR------MDFLLQQ 316
Query: 325 XXXXXXXXXXXXEDLHKFGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSN 384
E RLER E +++ N ASRQIYLTFPADSTF++EDV+
Sbjct: 317 HAQRDGGLPFGDERFWSSSPGRLERMELAMHLGDQSNSASRQIYLTFPADSTFKDEDVAT 376
Query: 385 YFSIYGPVQDVRIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKV 444
YFS++G VQDVRIPYQQKRMFGFV+FA+PETVK++L++GNPHF+CD+RVLVKPYKEKGKV
Sbjct: 377 YFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKV 436
Query: 445 PDKK-----LQQLDRGDFSPCGTPTGLDARDPFDLQVGGRMCYNTQDMLLRRKLEEQADF 499
DKK QQ++RG++SPC +P+G+D R+ D +G +M Y ++M +RRK+ EQAD
Sbjct: 437 LDKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREM-MRRKI-EQADL 494
Query: 500 QQALELQSRRLMGLQLLDIKK----QQQRAFSIGSP 531
+A+EL+ RR + LQL + K R+FS+GSP
Sbjct: 495 LRAIELERRRFINLQLPEFKNSVTLNHHRSFSVGSP 530
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 45/63 (71%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MD +AT ++ ++I++L+P+ A KI+G LLL D G+++++ LA GPES++ S I +
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60
Query: 61 LGL 63
LG+
Sbjct: 61 LGI 63
>AT3G21100.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:7399162-7401870 FORWARD LENGTH=602
Length = 602
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 191/499 (38%), Positives = 261/499 (52%), Gaps = 86/499 (17%)
Query: 153 GGSDSVDEFQLQDQLAFLNDGPPSLVQKNSDLFYPQSELXXXXXXXXXXXXLFASYGGWG 212
G D +DE QL + L+FLN+ ++ D F F++ G
Sbjct: 143 GNGDFLDEQQLGNYLSFLNESSSKNNDESLDPFG------------------FSADNG-D 183
Query: 213 GSVHRRSCSVNDACMGSEDTNSGFGWKPCLYFARGYCKNGTSCRFLHG------DAEGGA 266
+H+RS S +DAC GSE+ GFG G RFLHG D+ GG
Sbjct: 184 AHLHKRSFSASDACFGSEEP--GFG-------------GGGYNRFLHGGLGDDFDSPGG- 227
Query: 267 MVGSPSKIEMMDQCHELLRSKTIQPPRLAAASQLMGSSTFPYSHKCXXXXXXXXXXXXXX 326
GSP + Q E++R K Q R+AAA Q + ++ P S++
Sbjct: 228 -FGSPDYVSR--QQEEIVRMKMAQRQRMAAA-QYLAATGSPMSYE----KGLNFLLHQRN 279
Query: 327 XXXXXXXXXXEDLHKFGR-SRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNY 385
E+ + FG R ER+EF + N AS+QIYLTFPADS+F +EDVSNY
Sbjct: 280 AHRSGAGQFGEEGYWFGSPGRHERDEF-MGMGDKSNSASKQIYLTFPADSSFTDEDVSNY 338
Query: 386 FSIYGPVQDVRIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVP 445
F +GPVQDVRIPYQQKRMFGFVTF + ETV++IL++GNPHF+CD+RVLVKPYKEKG++
Sbjct: 339 FGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIILARGNPHFICDSRVLVKPYKEKGRIL 398
Query: 446 DKK-----LQQLDRGDFSPCGTPTGLDARDPFDLQVGGRMCYNTQDMLLRRKLEEQADFQ 500
+K+ LQQ++RG+FSP +P+G+D+RD FD + RM NTQ+M+ R+ EQAD Q
Sbjct: 399 EKRQQQQLLQQMERGNFSPGSSPSGMDSRDLFDSHLAPRMFSNTQEMMRRKA--EQADLQ 456
Query: 501 QALELQSRRLMGLQLLDIKKQ----QQRAFSIGSPIPSPNHSPSMFNQNLVPSPFHNSFE 556
QA+E Q RR + LQL D+ + QR+ SIGSP+ H NQ+++ S E
Sbjct: 457 QAIEFQRRRFLSLQLPDMDSESFLHHQRSLSIGSPV----HFSPRVNQSMLFRSESTSDE 512
Query: 557 SQEENGSSSVPASTPSIPVDQKLMQQDAKISVGKEVTIXXXXXXXXXXXXXXXXHEDLDL 616
E NG S + + D ++ +E H +
Sbjct: 513 VFEGNGDSGHQSEA------TRAFLSDTGHNISQE--------------RGYNSHLNKGQ 552
Query: 617 QECLEHILPDSPFASLTKA 635
+ LE+ LPDS FAS +K
Sbjct: 553 ETSLENTLPDSFFASPSKT 571
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MD + T I+F++I+ L+P+ ASKI+G LLLQD G+ +++RLALGPE+L+ SV L A+
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LGL 63
LGL
Sbjct: 61 LGL 63
>AT3G21100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:7400426-7401870 FORWARD LENGTH=296
Length = 296
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 176/284 (61%), Gaps = 35/284 (12%)
Query: 361 NPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFAYPETVKLIL 420
N AS+QIYLTFPADS+F +EDVSNYF +GPVQDVRIPYQQKRMFGFVTF + ETV++IL
Sbjct: 8 NSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIIL 67
Query: 421 SKGNPHFVCDARVLVKPYKEKGKVPDKK-----LQQLDRGDFSPCGTPTGLDARDPFDLQ 475
++GNPHF+CD+RVLVKPYKEKG++ +K+ LQQ++RG+FSP +P+G+D+RD FD
Sbjct: 68 ARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSPGSSPSGMDSRDLFDSH 127
Query: 476 VGGRMCYNTQDMLLRRKLEEQADFQQALELQSRRLMGLQLLDIKKQ----QQRAFSIGSP 531
+ RM NTQ+M+ R+ EQAD QQA+E Q RR + LQL D+ + QR+ SIGSP
Sbjct: 128 LAPRMFSNTQEMMRRKA--EQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQRSLSIGSP 185
Query: 532 IPSPNHSPSMFNQNLVPSPFHNSFESQEENGSSSVPASTPSIPVDQKLMQQDAKISVGKE 591
+ H NQ+++ S E E NG S + + D ++ +E
Sbjct: 186 V----HFSPRVNQSMLFRSESTSDEVFEGNGDSGHQSEAT------RAFLSDTGHNISQE 235
Query: 592 VTIXXXXXXXXXXXXXXXXHEDLDLQECLEHILPDSPFASLTKA 635
H + + LE+ LPDS FAS +K
Sbjct: 236 --------------RGYNSHLNKGQETSLENTLPDSFFASPSKT 265
>AT3G63450.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:23427191-23428864 REVERSE LENGTH=404
Length = 404
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 153/245 (62%), Gaps = 41/245 (16%)
Query: 282 ELLRSKTIQPPRLAAASQLMGSSTFPYSHKCXXXXXXXXXXXXXXXXXXXXXXXXEDLHK 341
E+LRS ++ PPRLA +Q G +P+S K +DLHK
Sbjct: 89 EVLRSNSV-PPRLA--NQFTG---YPFSPK-------GVNLQQSEAQRAAALMMGDDLHK 135
Query: 342 FGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQ 401
G R ER + S PASRQIYLTFPADS FREEDVS+YFS +GPVQDVRIPYQQ
Sbjct: 136 LGIWRPERIDLS----ATACPASRQIYLTFPADSIFREEDVSDYFSTFGPVQDVRIPYQQ 191
Query: 402 KRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKLQQLDRGDFSPCG 461
KRMFGFVTF YPETVK IL+KGNPHFVC +RVLVKPYKEKGKVPDK P
Sbjct: 192 KRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPDKT---------KP-- 240
Query: 462 TPTGLDARDPFDLQVGGRMCYNTQDMLLRRKLEEQADFQQALELQSRRLMGLQLLDIKKQ 521
+RD D Q+GGR + +D+L +R+ EE +ALELQS RLM LQLLD++KQ
Sbjct: 241 ------SRDIMDFQLGGRAFH--EDLLWKRRFEE-----RALELQSTRLMNLQLLDVEKQ 287
Query: 522 QQRAF 526
Q F
Sbjct: 288 FQLNF 292
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 55/61 (90%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MD YEATRIV SRIQNLDP NASKI+GLLLLQDHGEKEMIRLA GP++L+HSVI A+K+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>AT3G63450.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:23427191-23428864 REVERSE LENGTH=404
Length = 404
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 153/245 (62%), Gaps = 41/245 (16%)
Query: 282 ELLRSKTIQPPRLAAASQLMGSSTFPYSHKCXXXXXXXXXXXXXXXXXXXXXXXXEDLHK 341
E+LRS ++ PPRLA +Q G +P+S K +DLHK
Sbjct: 89 EVLRSNSV-PPRLA--NQFTG---YPFSPK-------GVNLQQSEAQRAAALMMGDDLHK 135
Query: 342 FGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQ 401
G R ER + S PASRQIYLTFPADS FREEDVS+YFS +GPVQDVRIPYQQ
Sbjct: 136 LGIWRPERIDLS----ATACPASRQIYLTFPADSIFREEDVSDYFSTFGPVQDVRIPYQQ 191
Query: 402 KRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKLQQLDRGDFSPCG 461
KRMFGFVTF YPETVK IL+KGNPHFVC +RVLVKPYKEKGKVPDK P
Sbjct: 192 KRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPDKT---------KP-- 240
Query: 462 TPTGLDARDPFDLQVGGRMCYNTQDMLLRRKLEEQADFQQALELQSRRLMGLQLLDIKKQ 521
+RD D Q+GGR + +D+L +R+ EE +ALELQS RLM LQLLD++KQ
Sbjct: 241 ------SRDIMDFQLGGRAFH--EDLLWKRRFEE-----RALELQSTRLMNLQLLDVEKQ 287
Query: 522 QQRAF 526
Q F
Sbjct: 288 FQLNF 292
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 55/61 (90%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MD YEATRIV SRIQNLDP NASKI+GLLLLQDHGEKEMIRLA GP++L+HSVI A+K+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>AT3G63450.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:23427191-23428864 REVERSE LENGTH=406
Length = 406
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 153/245 (62%), Gaps = 39/245 (15%)
Query: 282 ELLRSKTIQPPRLAAASQLMGSSTFPYSHKCXXXXXXXXXXXXXXXXXXXXXXXXEDLHK 341
E+LRS ++ PPRLA +Q G +P+S K +DLHK
Sbjct: 89 EVLRSNSV-PPRLA--NQFTG---YPFSPK-------GVNLQQSEAQRAAALMMGDDLHK 135
Query: 342 FGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQ 401
G R ER + S PASRQIYLTFPADS FREEDVS+YFS +GPVQDVRIPYQQ
Sbjct: 136 LGIWRPERIDLS----ATACPASRQIYLTFPADSIFREEDVSDYFSTFGPVQDVRIPYQQ 191
Query: 402 KRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKLQQLDRGDFSPCG 461
KRMFGFVTF YPETVK IL+KGNPHFVC +RVLVKPYKEKGKVPDK +
Sbjct: 192 KRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPDKYRTK---------- 241
Query: 462 TPTGLDARDPFDLQVGGRMCYNTQDMLLRRKLEEQADFQQALELQSRRLMGLQLLDIKKQ 521
+RD D Q+GGR + +D+L +R+ EE +ALELQS RLM LQLLD++KQ
Sbjct: 242 -----PSRDIMDFQLGGRAFH--EDLLWKRRFEE-----RALELQSTRLMNLQLLDVEKQ 289
Query: 522 QQRAF 526
Q F
Sbjct: 290 FQLNF 294
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 55/61 (90%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MD YEATRIV SRIQNLDP NASKI+GLLLLQDHGEKEMIRLA GP++L+HSVI A+K+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>AT1G51520.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:19106789-19109093 FORWARD LENGTH=513
Length = 513
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 178/337 (52%), Gaps = 69/337 (20%)
Query: 216 HRRSCSVNDACMGSEDTNSGFGWKPCLYFARGYCKNGTSCRFLHGDAEGGAMVGSPSKIE 275
H+RS S NDAC SE+ G G C F +G +G + GSPS+++
Sbjct: 157 HKRSFSANDACFESEEPWFG-GGNGCHQFPQGGLVDGFGS---------SGVFGSPSEMD 206
Query: 276 MMDQCHELLRSKTIQPPRLAAASQLMGSSTFPYSHKCXXXXXXXXXXXXXXXXXXXXXXX 335
M ++R K Q + AA Q M + P H+
Sbjct: 207 YM--LEGMMRMKLAQQKSMVAA-QFMAACGSPMLHR-----------------HGSGHFG 246
Query: 336 XEDLHKFGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDV 395
E + F + R ER + S+QIYLTFP++S+F +EDVS YF +G V DV
Sbjct: 247 EECGNYFSQGRHERED----------SVSKQIYLTFPSESSFTDEDVSTYFRDFGLVDDV 296
Query: 396 RIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKLQQ---- 451
RIPYQQ+RM+GFVTFA ETV+ IL++GNPHF+CD+RVLVKPYKEKGK+ K+ QQ
Sbjct: 297 RIPYQQQRMYGFVTFAKAETVRTILARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHE 356
Query: 452 -LDRGDFSPCGTPTGLDARDPFDLQVGGRMCYNTQDMLLRRKLEEQADFQQALELQSRRL 510
L+RG++SP +P+G D+R+ ++ ++G RM +LRRK EQAD Q A+E
Sbjct: 357 LLERGNYSPSSSPSGKDSRELYECRLGPRMFSKKTQEMLRRKT-EQADLQHAIE------ 409
Query: 511 MGLQLLDIKKQQQRAFSIGSPIPSPNHSPSMFNQNLV 547
R+ SIG SP+H P FN +L+
Sbjct: 410 -------------RSPSIG----SPSHFPPRFNHSLL 429
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MD + T I+FS+I+ + ENAS+++ LLQD ++++IR+A GP+SL+ + A+ +
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LGLAMN 66
LG + N
Sbjct: 61 LGFSSN 66
>AT1G51520.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:19106789-19108533 FORWARD LENGTH=414
Length = 414
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 167/299 (55%), Gaps = 46/299 (15%)
Query: 216 HRRSCSVNDACMGSEDTNSGFGWKPCLYFARGYCKNGTSCRFLHGDAEGGAMVGSPSKIE 275
H+RS S NDAC SE+ G G C F +G +G + GSPS+++
Sbjct: 157 HKRSFSANDACFESEEPWFG-GGNGCHQFPQGGLVDGFG---------SSGVFGSPSEMD 206
Query: 276 MMDQCHELLRSKTIQPPRLAAASQLMGSSTFPYSHKCXXXXXXXXXXXXXXXXXXXXXXX 335
M ++R K Q + AA Q M + P H+
Sbjct: 207 YM--LEGMMRMKLAQQKSMVAA-QFMAACGSPMLHR-----------------HGSGHFG 246
Query: 336 XEDLHKFGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDV 395
E + F + R ER + S+QIYLTFP++S+F +EDVS YF +G V DV
Sbjct: 247 EECGNYFSQGRHERED----------SVSKQIYLTFPSESSFTDEDVSTYFRDFGLVDDV 296
Query: 396 RIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKLQQ---- 451
RIPYQQ+RM+GFVTFA ETV+ IL++GNPHF+CD+RVLVKPYKEKGK+ K+ QQ
Sbjct: 297 RIPYQQQRMYGFVTFAKAETVRTILARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHE 356
Query: 452 -LDRGDFSPCGTPTGLDARDPFDLQVGGRMCYNTQDMLLRRKLEEQADFQQALELQSRR 509
L+RG++SP +P+G D+R+ ++ ++G RM +LRRK EQAD Q A+E++ +R
Sbjct: 357 LLERGNYSPSSSPSGKDSRELYECRLGPRMFSKKTQEMLRRKT-EQADLQHAIEVELQR 414
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLALGPESLVHSVILTARKE 60
MD + T I+FS+I+ + ENAS+++ LLQD ++++IR+A GP+SL+ + A+ +
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LGLAMN 66
LG + N
Sbjct: 61 LGFSSN 66
>AT2G05160.1 | Symbols: | CCCH-type zinc fingerfamily protein with
RNA-binding domain | chr2:1859011-1860931 REVERSE
LENGTH=536
Length = 536
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 123/246 (50%), Gaps = 45/246 (18%)
Query: 236 FGWKPCLYFARGYCKNGTSCRFLHG----DAEGGAM-------------VGSPSKIEMMD 278
F K C YF +G+CK+G +CR+ HG + E A V SP +E ++
Sbjct: 157 FPVKICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSPVSLEKLE 216
Query: 279 -QCHELLR--------------------SKTIQPPRLAAASQLMGSSTFPYSHKCXXXXX 317
+ ELL+ +T+Q SQ G + YS
Sbjct: 217 GEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAG--YSLTKLLARL 274
Query: 318 XXXXXXXXXXXXXXXXXXXEDLHKFGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTF 377
ED KF ERNE G + SRQIYLTFPA+S+F
Sbjct: 275 KNTIRLVDRPHGQHSVILAEDASKFVEYTGERNEH-----GAILAGSRQIYLTFPAESSF 329
Query: 378 REEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKP 437
E DVS YF+ YG V+DVRIP QQKRM+GFVTFA ETVK IL+KGNPHF+C+ARVLVKP
Sbjct: 330 TEHDVSIYFTSYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKP 389
Query: 438 YKEKGK 443
Y+EK +
Sbjct: 390 YREKSR 395
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMG-LLLLQDHGEKEMIRLALGPESLVHSVILTARK 59
M+ E+ +V +RIQ L+PENA+KI G LLL+Q++G ++MIRLA P+S++ SVI +
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 60 ELG 62
EL
Sbjct: 61 ELA 63
>AT3G52980.1 | Symbols: | Zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein |
chr3:19645660-19646962 FORWARD LENGTH=381
Length = 381
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 236 FGWKPCLYFARGYCKNGTSCRFLHGDAEGGAMVGSPSKIEMMD-QCHELLRSKTIQPPRL 294
F K C YF +G+CK+G +C H + V SP +E ++ + ELL+S+ P +
Sbjct: 165 FPLKICHYFNKGFCKHGNNC---HNNLSDEEHVVSPGSLEKLEREIIELLKSRRGAPISI 221
Query: 295 A--------------------AASQLMGSSTFPYSHKCXXXXXXXXXXXXXXXXXXXXXX 334
A SQ G + F +
Sbjct: 222 AFLPMMYHEKYGRSLQAEGYLTESQRHGKAGFSLTK--LLARLKNTIRLIDRPHGQHSVI 279
Query: 335 XXEDLHKFGRSRLERNEFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQD 394
ED+ KF ER+E G + SRQ+YLTFPA+S+F E DVSNYFS GPV+D
Sbjct: 280 LAEDVSKFVEYTGERSEH-----GAILAGSRQVYLTFPAESSFTEHDVSNYFSEVGPVED 334
Query: 395 VRIPYQQKRMFGFVTFAYPETVKLILSKG 423
VRIP QQKRM+GFVTF Y ETVK IL+K
Sbjct: 335 VRIPCQQKRMYGFVTFVYMETVKRILAKA 363
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMG-LLLLQDHGEKEMIRLALGPESLVHSVILTARK 59
M+ EA +V +RI L+PENASKI+G LLL+QD +++MIRLA P+S++ S+I +
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 60 ELG 62
EL
Sbjct: 61 ELA 63
>AT1G51530.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:19109854-19112152 FORWARD LENGTH=403
Length = 403
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 38/169 (22%)
Query: 376 TFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLV 435
+F ++ VS YF +GPV VRIP Q+++++GFV+FA ETV IL + NPH + ++ V V
Sbjct: 185 SFTDQHVSTYFGNFGPVLSVRIPNQKEQVYGFVSFANAETVTTILDQENPHLIGESPVNV 244
Query: 436 KPYKEKGKVPDKKLQQLDRGDFSPCGTPTGLDARDPFDLQVG--------GRMCYNTQDM 487
+ T G+ R+PF + G R T +M
Sbjct: 245 ----------------------TAAATTAGVGWREPFSVGNGPKGAMSRPRRFRNETHEM 282
Query: 488 LLRRKLEEQADFQQALEL--QSRRLMGLQLLDIKKQ----QQRAFSIGS 530
L R EQAD QQA+E+ Q RRL LQL ++ + Q + SIGS
Sbjct: 283 LQRNT--EQADPQQAIEVEDQIRRLSNLQLPGMENKSIHHHQPSPSIGS 329
>AT1G51530.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:19109854-19112152 FORWARD LENGTH=391
Length = 391
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 38/156 (24%)
Query: 389 YGPVQDVRIPYQQKRMFGFVTFAYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKK 448
+GPV VRIP Q+++++GFV+FA ETV IL + NPH + ++ V V
Sbjct: 186 FGPVLSVRIPNQKEQVYGFVSFANAETVTTILDQENPHLIGESPVNV------------- 232
Query: 449 LQQLDRGDFSPCGTPTGLDARDPFDLQVG--------GRMCYNTQDMLLRRKLEEQADFQ 500
+ T G+ R+PF + G R T +ML R EQAD Q
Sbjct: 233 ---------TAAATTAGVGWREPFSVGNGPKGAMSRPRRFRNETHEMLQRNT--EQADPQ 281
Query: 501 QALEL--QSRRLMGLQLLDIKKQ----QQRAFSIGS 530
QA+E+ Q RRL LQL ++ + Q + SIGS
Sbjct: 282 QAIEVEDQIRRLSNLQLPGMENKSIHHHQPSPSIGS 317