Miyakogusa Predicted Gene

Lj3g3v0642530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0642530.1 Non Chatacterized Hit- tr|D8T4H1|D8T4H1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,38.03,9e-16,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL,gene.g45768.t1.1
         (284 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61420.1 | Symbols:  | BSD domain (BTF2-like transcription fa...   221   3e-58
AT1G55750.1 | Symbols:  | BSD domain (BTF2-like transcription fa...   220   7e-58

>AT3G61420.1 | Symbols:  | BSD domain (BTF2-like transcription
           factors, Synapse-associated proteins and DOS2-like
           proteins) | chr3:22727235-22731760 REVERSE LENGTH=579
          Length = 579

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/290 (43%), Positives = 175/290 (60%), Gaps = 26/290 (8%)

Query: 12  FKYSFIFDTKPTTTSEDDEDIA----LFLKDGEILQVEARKKVRRVDPTLDMEADQGDDY 67
           F+  +++ TK T  +  +        +FLK  EIL  EAR+K+RRVDPTLDM+AD+GDDY
Sbjct: 231 FRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILAQEARQKMRRVDPTLDMDADEGDDY 290

Query: 68  THLPDHGIFRDGSKEIPEAQHPLYRRTLLQDLNRQGALVLEGKTLDI------MEMEHIH 121
           THL DHGI RDG+ +I E Q+   +R+LLQDLNR  A+VLEG+ +++      +  E + 
Sbjct: 291 THLMDHGIQRDGTNDIIEPQNDQLKRSLLQDLNRHAAVVLEGRCINVQSEDTRIVAEALT 350

Query: 122 ESVGVRE----------EARRNIFSKMTQIEDLQAQDNHPFAPLCVKDPRDYFGSQQANV 171
            +  V +          + R    S+ T++EDLQA  N P APL +KDPRDYF SQQ N+
Sbjct: 351 RAKQVSKADGEITKDANQERLERMSRATEMEDLQAPQNFPLAPLSIKDPRDYFESQQGNI 410

Query: 172 -EQTRGSLGSDK---EAYGYLRASISKIKAKGLKDPLLSSEIALNGL--MTKNVSGTKSH 225
             + RG+  S +   EAYG L+ SI  I+  GL DPL+  E++      +T+ +S  K+ 
Sbjct: 411 LSEPRGAKASKRNVHEAYGLLKESILVIRMTGLSDPLIKPEVSFEVFSSLTRTISTAKNI 470

Query: 226 LESSQEISDHDSLPSTVRDELLDHWRCSQELLRHFWSSYPITARDLINKT 275
           L  + + S  D LP + +DE++ HW   QEL+RHFWSSYPIT   L  K 
Sbjct: 471 LGKNPQESFLDRLPKSTKDEVIHHWTSIQELVRHFWSSYPITTTYLSTKV 520


>AT1G55750.1 | Symbols:  | BSD domain (BTF2-like transcription
           factors, Synapse-associated proteins and DOS2-like
           proteins) | chr1:20840449-20845135 REVERSE LENGTH=591
          Length = 591

 Score =  220 bits (561), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 125/290 (43%), Positives = 176/290 (60%), Gaps = 26/290 (8%)

Query: 12  FKYSFIFDTKPTTTSEDDEDIA----LFLKDGEILQVEARKKVRRVDPTLDMEADQGDDY 67
           F+  +++ TK T  +  +        +FLK  EIL  E R K+RRVDPTLDMEADQGDDY
Sbjct: 236 FRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDY 295

Query: 68  THLPDHGIFRDGSKEIPEAQHPLYRRTLLQDLNRQGALVLEGKTLDI------------M 115
           THL DHGI RDG+ ++ E Q+  ++R+LLQDLNR  A+VLEG+++D+             
Sbjct: 296 THLMDHGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALT 355

Query: 116 EMEHIHESVG-VREEARRNIFSKMTQI---EDLQAQDNHPFAPLCVKDPRDYFGSQQANV 171
            ++ + ++ G   ++A +    +M+++   EDLQA  N P APL +KDPRDYF SQQ NV
Sbjct: 356 RVKQVSKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNV 415

Query: 172 EQT-RGSLGSDK---EAYGYLRASISKIKAKGLKDPLLSSEIALNGL--MTKNVSGTKSH 225
               RG+ G  +   EAYG L+ SI +I+A GL DPL+  E++      +T+ ++  K+ 
Sbjct: 416 LNVPRGAKGLKRNVHEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKNI 475

Query: 226 LESSQEISDHDSLPSTVRDELLDHWRCSQELLRHFWSSYPITARDLINKT 275
              +   S  D LP + +DE+L HW   QELL+HFWSSYPIT   L  K 
Sbjct: 476 NGKNPRESFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKV 525