Miyakogusa Predicted Gene
- Lj3g3v0642450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0642450.1 Non Chatacterized Hit- tr|I1MVR5|I1MVR5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,24.59,4e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; PGR3 (PROTON
GRADIENT REGULATION 3),N,gene.g45759.t1.1
(592 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 489 e-138
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 483 e-136
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 479 e-135
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 478 e-135
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 475 e-134
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 464 e-131
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 459 e-129
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 458 e-129
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-129
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 451 e-127
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 451 e-127
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 445 e-125
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 443 e-124
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 441 e-124
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 437 e-123
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 434 e-122
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 434 e-122
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 429 e-120
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 429 e-120
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 424 e-119
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 418 e-117
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 417 e-116
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 415 e-116
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-115
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 412 e-115
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 410 e-114
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-114
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 408 e-114
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 407 e-114
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 407 e-113
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 404 e-113
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 395 e-110
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 392 e-109
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 392 e-109
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 391 e-109
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 388 e-108
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 379 e-105
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 370 e-102
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 369 e-102
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 368 e-102
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 364 e-100
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 360 2e-99
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 355 6e-98
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 1e-97
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 3e-97
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 3e-97
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 348 5e-96
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 7e-96
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 344 8e-95
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 5e-94
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 340 1e-93
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 9e-93
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 337 1e-92
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 332 4e-91
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 6e-86
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 6e-86
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 9e-85
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 9e-83
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 9e-82
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 3e-81
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 6e-81
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 7e-81
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 1e-78
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 3e-78
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 6e-78
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 286 3e-77
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 281 8e-76
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 5e-75
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 8e-75
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 3e-74
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 274 1e-73
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 6e-73
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 1e-72
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 2e-72
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 8e-69
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 8e-69
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 8e-68
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 7e-67
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 250 2e-66
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 249 3e-66
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 249 6e-66
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 244 9e-65
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 243 3e-64
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 9e-62
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 7e-60
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 2e-54
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 9e-53
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 5e-52
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 7e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 5e-50
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 2e-42
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 7e-42
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 1e-40
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 8e-34
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 122 7e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 119 6e-27
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 8e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 102 7e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 8e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 8e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 9e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 89 1e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 2e-17
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 85 1e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 84 4e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 76 7e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 74 4e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 70 3e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 70 4e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 69 7e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 69 1e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 5e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 8e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 65 1e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 8e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 56 9e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 55 1e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 7e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 489 bits (1260), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/542 (43%), Positives = 347/542 (64%), Gaps = 2/542 (0%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WNS + F ++G+P + LF ++ + H T +L AC ++ GR + +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y+++ NL L N +L +Y CG A+ +FD M ++D TW M+ + D A
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME-REGSRPNEVTVVAVLVACA 231
AR++ +SMP++++ +W ++IS + G EAL VF E++ ++ + N++T+V+ L ACA
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
Q+G LE G+ IH + + +G N +V +ALI MY KCG LE+ VF+ + +R V WS+
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI G AMH M + +KPN VTF V ACSH GLVD+ F M +Y
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
GIVP +HY C+VD+L R+G LE+A + I M +PP+ VWGALLG C++H N+ LAE A
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
L EL+P NDG +V++SN+YA+ GKWE VS +R+ M+ G+KK PGCSSI IDG++HE
Sbjct: 557 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 616
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQ-KEIFLYRHSEKLAL 530
F++GD HP ++ ++ +++ K+K GY P+ S VL +E+E+ KE L HSEKLA+
Sbjct: 617 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 676
Query: 531 VYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKD 590
YGLI+T+ IR++KNLRVC DCH+ KL+S++ +REI+VRDR RFH F+NG C+C D
Sbjct: 677 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 736
Query: 591 YW 592
+W
Sbjct: 737 FW 738
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 200/437 (45%), Gaps = 71/437 (16%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRI 109
P WN+ ++ +A P +I FL + + P+ +T FL+KA S + G+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H K S++ + N L+H Y SCG D
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCG-------------------------------D 181
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+ +A +F ++ ++V SW S+I+G + G ++AL +F +ME E + + VT+V VL A
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
CA++ +LEFG+ + + E N N+ + NA++DMY KCG +E+ R+FD M E+ V+W
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 290 SSMIVGFAMHXXXXXXXXXXXXM--------------------------------IRSGM 317
++M+ G+A+ M ++ M
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 318 KPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 377
K N +T + L AC+ VG ++ GR + +++ +GI L+ + S+ G LE++R
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSR 420
Query: 378 EVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVY---A 434
EV N + VW A++GG +H A + + E + +G V +NV+ +
Sbjct: 421 EVF-NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG--VTFTNVFCACS 477
Query: 435 EAGKWEEVSRIRRSMKS 451
G +E + M+S
Sbjct: 478 HTGLVDEAESLFHQMES 494
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 6/280 (2%)
Query: 164 LISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVT 222
L S + AR +FD +P+ N +W ++I A ++ F +M E PN+ T
Sbjct: 74 LSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 133
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
++ A A++ L G+S+H A + +V+V N+LI Y CG L+ C+VF ++
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
E+ VVSW+SMI GF M +K +HVT +GVL AC+ + ++ GR+
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
+ + + V + ++D+ ++ G +E+A+ + M N V W +L G +
Sbjct: 254 VCSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDGYAIS 311
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEV 442
++ + A E + + + D + + + + Y + GK E
Sbjct: 312 EDYEAAREVLNSMPQKDIV---AWNALISAYEQNGKPNEA 348
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/543 (42%), Positives = 341/543 (62%), Gaps = 1/543 (0%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P WN ++ F+ P ++ L+ R+ S + +T LLKAC+ S I
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
HA + KLG+++++ N L++ YA G A L+FD++P+ D +WN +I + AG +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
A LF M +N SWT++ISG + M++EAL++F EM+ P+ V++ L AC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
AQLG LE GK IH + + + LIDMY KCG +EE VF +++++V +W+
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
++I G+A H M + G+KPN +TF VL ACS+ GLV++G+ F M RD
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
Y + P +EHYGC+VDLL RAG L+EA+ I M + PN V+WGALL CR+HKNI+L EE
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
L +DP + G YV +N++A KW++ + RR MK +GV K PGCS+I+++G H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDM-EDEQKEIFLYRHSEKLA 529
EF+AGD +HP+ + I W + K++ GY+P+ +LLD+ +D+++E +++HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 530 LVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCK 589
+ YGLI TKPG IRIMKNLRVC+DCH KL+S+I R+IV+RDR RFH F++G C+C
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCG 617
Query: 590 DYW 592
DYW
Sbjct: 618 DYW 620
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 75/307 (24%)
Query: 35 LIKTNAPLSHVDLAHV-------PAIVPWNSCLKFF----------------AERGAPC- 70
LI + A + LAH+ P V WNS +K + AE+ A
Sbjct: 156 LINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISW 215
Query: 71 --------------DTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQK 116
+ + LF ++ + PD+ + + L AC + G+ IH+Y+ K
Sbjct: 216 TTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK 275
Query: 117 LGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDL 176
+ + +L +L+ +YA CGE A +F
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVF------------------------------ 305
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDL 236
++ +++V++WT++ISG A G EA+ F EM++ G +PN +T AVL AC+ G +
Sbjct: 306 -KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 237 EFGKSIHRFAEGNGFLRNV---YVCNALIDMYVKCGCLEEGCRVFDGMRER-TVVSWSSM 292
E GK I E + L+ Y C ++D+ + G L+E R M + V W ++
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGC--IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 293 IVGFAMH 299
+ +H
Sbjct: 423 LKACRIH 429
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 37/296 (12%)
Query: 141 HARLMFDKMPQQDVATWNIMIGHLISAGD--VGAARDLFDSMPRRNVRSWTSVISGLAKC 198
HAR++ + Q A + + S + A+ +FD R + W +I G +
Sbjct: 34 HARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCS 93
Query: 199 GMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVC 258
E +L ++ M + N T ++L AC+ L E IH G+ +VY
Sbjct: 94 DEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAV 153
Query: 259 NALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS--------------------------- 291
N+LI+ Y G + +FD + E VSW+S
Sbjct: 154 NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI 213
Query: 292 ----MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
MI G+ M S ++P++V+ L AC+ +G +++G+ + +
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 273
Query: 348 RRDYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
+ + V GC L+D+ ++ G +EEA EV N+ + W AL+ G H
Sbjct: 274 NKTRIRMDSV--LGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISGYAYH 326
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/543 (42%), Positives = 346/543 (63%), Gaps = 1/543 (0%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P + +N ++ F+ P + ++ + I PD+ T FL+KA + ++ G
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H+ + + GFQ+++ ++N L+H+YA+CG + A +F +M +DV +W M+ G V
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMV 199
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
AR++FD MP RN+ +W+ +I+G AK E+A+ +F M+REG NE +V+V+ +C
Sbjct: 200 ENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSC 259
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
A LG LEFG+ + + + N+ + AL+DM+ +CG +E+ VF+G+ E +SWS
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWS 319
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S+I G A+H MI G P VTF VL ACSH GLV+KG E + M++D
Sbjct: 320 SIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKD 379
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
+GI P +EHYGC+VD+L RAG+L EA I M V PN + GALLG C+++KN ++AE
Sbjct: 380 HGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAER 439
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
L ++ P + GYYV++SN+YA AG+W+++ +R MK + VKK PG S I IDG ++
Sbjct: 440 VGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKIN 499
Query: 471 EFVAG-DETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLA 529
+F G D+ HP+ I WE++L K+++ GY +T D+++E+KE ++ HSEKLA
Sbjct: 500 KFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLA 559
Query: 530 LVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCK 589
+ YG++ TKPG IRI+KNLRVCEDCHT KL+SE+ RE++VRDRNRFH F+NG C+C+
Sbjct: 560 IAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCR 619
Query: 590 DYW 592
DYW
Sbjct: 620 DYW 622
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 148/359 (41%), Gaps = 63/359 (17%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
LL++C+ SD+ +IIH ++ + S++ + + LL L D
Sbjct: 18 LLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCV------------------D 56
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
+T+N L G A +F + N+ + +I + +A +++M +
Sbjct: 57 DSTFNKPTNLL------GYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK 110
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
P+ +T ++ A +++ + G+ H GF +VYV N+L+ MY CG +
Sbjct: 111 SRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAA 170
Query: 274 GCRVFDGMRERTVVSWSSMIV-------------------------------GFAMHXXX 302
R+F M R VVSW+SM+ G+A +
Sbjct: 171 AGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCF 230
Query: 303 XXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGC 362
M R G+ N + V+ +C+H+G ++ G + + + + V +
Sbjct: 231 EKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA- 289
Query: 363 LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL 421
LVD+ R G +E+A V + + + W +++ G +H + A +AM + S++ L
Sbjct: 290 LVDMFWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVHGH---AHKAMHYFSQMISL 344
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/544 (43%), Positives = 344/544 (63%), Gaps = 6/544 (1%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P + + + + + G L+++L I P+ FT S LLK+C+ S G++I
Sbjct: 93 PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLI 148
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H +V K G + + L+ +YA G+ A+ +FD+MP++ + + MI G+V
Sbjct: 149 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 208
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVA 229
AAR LFDSM R++ SW +I G A+ G +AL +F ++ EG +P+E+TVVA L A
Sbjct: 209 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 268
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
C+Q+G LE G+ IH F + + NV VC LIDMY KCG LEE VF+ + +V+W
Sbjct: 269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 328
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
++MI G+AMH M +G++P +TFIG L AC+H GLV++G F M
Sbjct: 329 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 388
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
++YGI P +EHYGCLV LL RAG+L+ A E I NM++ + V+W ++LG C+LH + L
Sbjct: 389 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLG 448
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGV 468
+E +L L+ N G YV++SN+YA G +E V+++R MK +G+ K PG S+I I+
Sbjct: 449 KEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENK 508
Query: 469 VHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKL 528
VHEF AGD H ++K I+ M K+ ++K GY+P+T+ VL D+E+ +KE L HSE+L
Sbjct: 509 VHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERL 568
Query: 529 ALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTC 588
A+ YGLI+TKPG P++I KNLRVC DCHT KL+S+I R+IV+RDRNRFH F +G+C+C
Sbjct: 569 AIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSC 628
Query: 589 KDYW 592
D+W
Sbjct: 629 GDFW 632
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 47/328 (14%)
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
S G + + LF ++ +T+ I+ + G+ ++A ++ ++ PNE T +
Sbjct: 76 SHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSS 135
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
+L +C+ + GK IH G + YV L+D+Y K G + +VFD M ER+
Sbjct: 136 LLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 286 -------------------------------VVSWSSMIVGFAMHXXXXXXXXXXXXMIR 314
+VSW+ MI G+A H ++
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 315 SGM-KPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 373
G KP+ +T + L ACS +G ++ GR + + + I V+ L+D+ S+ G L
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGR-WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSL 310
Query: 374 EEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL-----NDGYYVV 428
EEA ++ N + + V W A++ G +H +++A+R +E+ + D ++
Sbjct: 311 EEAV-LVFNDTPRKDIVAWNAMIAGYAMH---GYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 429 MSNVYAEAGKWEEVSRIRRSM-KSRGVK 455
A AG E RI SM + G+K
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIK 394
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/591 (41%), Positives = 363/591 (61%), Gaps = 26/591 (4%)
Query: 28 LKQARALLIKTNAPLSHVDLAHVPAIV---------PWNSCLKFFAERGAPCDTISLFLR 78
L A L + L H DL + I WN+ ++ F+E I++ L
Sbjct: 56 LAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLF 115
Query: 79 LRQLS---ILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYAS 135
+S + P+ FT +LKAC + I G+ IH K GF + + + L+ +Y
Sbjct: 116 YEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM 175
Query: 136 CGETSHARLMFDK-MPQQD-------------VATWNIMIGHLISAGDVGAARDLFDSMP 181
CG AR++F K + ++D + WN+MI + GD AAR LFD M
Sbjct: 176 CGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMR 235
Query: 182 RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKS 241
+R+V SW ++ISG + G ++A+ VF EM++ RPN VT+V+VL A ++LG LE G+
Sbjct: 236 QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEW 295
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXX 301
+H +AE +G + + +ALIDMY KCG +E+ VF+ + V++WS+MI GFA+H
Sbjct: 296 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQ 355
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
M ++G++P+ V +I +L ACSH GLV++GR +F+ M G+ P +EHYG
Sbjct: 356 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYG 415
Query: 362 CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL 421
C+VDLL R+G L+EA E I NM + P+ V+W ALLG CR+ N+++ + L ++ P
Sbjct: 416 CMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPH 475
Query: 422 NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 481
+ G YV +SN+YA G W EVS +R MK + ++K PGCS I IDGV+HEFV D++HP+
Sbjct: 476 DSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPK 535
Query: 482 AKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGM 541
AK I M ++ K+++ GY P T+ VLL++E+E KE L+ HSEK+A +GLI+T PG
Sbjct: 536 AKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGK 595
Query: 542 PIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
PIRI+KNLR+CEDCH+++KL+S++ R+I VRDR RFH F++G+C+C DYW
Sbjct: 596 PIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/573 (40%), Positives = 358/573 (62%), Gaps = 17/573 (2%)
Query: 33 ALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFA------ERGAPCDTISLFLRLRQLSILP 86
A +I P+ H+ + + + WN ++ +R +P IS++LR+R + P
Sbjct: 5 AAIIAYANPIFHIRHLKLESFL-WNIIIRAIVHNVSSPQRHSP---ISVYLRMRNHRVSP 60
Query: 87 DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMF 146
D T FLL + + G+ HA + G + ++ LL++Y+SCG+ A+ +F
Sbjct: 61 DFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVF 120
Query: 147 DKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALR 206
D +D+ WN ++ AG + AR LFD MP RNV SW+ +I+G CG +EAL
Sbjct: 121 DDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALD 180
Query: 207 VFSEMEREGS-----RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
+F EM+ RPNE T+ VL AC +LG LE GK +H + + ++ + AL
Sbjct: 181 LFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTAL 240
Query: 262 IDMYVKCGCLEEGCRVFDGM-RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRS-GMKP 319
IDMY KCG LE RVF+ + ++ V ++S+MI AM+ M S + P
Sbjct: 241 IDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINP 300
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
N VTF+G+L AC H GL+++G+ +F +M ++GI P ++HYGC+VDL R+G ++EA
Sbjct: 301 NSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESF 360
Query: 380 IANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKW 439
IA+M + P+ ++WG+LL G R+ +IK E A++ L ELDP+N G YV++SNVYA+ G+W
Sbjct: 361 IASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRW 420
Query: 440 EEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK 499
EV IR M+ +G+ K PGCS + ++GVVHEFV GDE+ +++ I+ M ++++ +++
Sbjct: 421 MEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREA 480
Query: 500 GYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTAL 559
GY+ DT VLLD+ ++ KEI L HSEKLA+ + L+ T+PG P+RI+KNLR+C DCH +
Sbjct: 481 GYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVM 540
Query: 560 KLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
K++S++ +REIVVRD NRFH F++G+C+C+D+W
Sbjct: 541 KMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/539 (41%), Positives = 341/539 (63%), Gaps = 33/539 (6%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRIIHAYV 114
WN+ ++ +AE G SL+ +R ++ PD T FL+KA T +D+ G IH+ V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 115 QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAAR 174
+ GF S + +QN LLHLYA+CG DV +A
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCG-------------------------------DVASAY 176
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
+FD MP +++ +W SVI+G A+ G EEAL +++EM +G +P+ T+V++L ACA++G
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
L GK +H + G RN++ N L+D+Y +CG +EE +FD M ++ VSW+S+IV
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 295 GFAMHXXXXXXXXXXXXMIRS-GMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
G A++ M + G+ P +TF+G+L+ACSH G+V +G E+F MR +Y I
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
P +EH+GC+VDLL+RAG++++A E I +M + PN V+W LLG C +H + LAE A
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARI 416
Query: 414 HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFV 473
+ +L+P + G YV++SN+YA +W +V +IR+ M GVKK PG S + + VHEF+
Sbjct: 417 QILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFL 476
Query: 474 AGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYG 533
GD++HPQ+ I+ +++ +++ +GY+P S V +D+E+E+KE + HSEK+A+ +
Sbjct: 477 MGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFM 536
Query: 534 LINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
LI+T PI ++KNLRVC DCH A+KLVS++ NREIVVRDR+RFH FKNG+C+C+DYW
Sbjct: 537 LISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 3/239 (1%)
Query: 184 NVRSWTSVISGLAKCGMSEEALRVFSEMEREG-SRPNEVTVVAVLVACAQLGDLEFGKSI 242
NV W ++I G A+ G S A ++ EM G P+ T ++ A + D+ G++I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXX 302
H +GF +YV N+L+ +Y CG + +VFD M E+ +V+W+S+I GFA +
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 303 XXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGC 362
M G+KP+ T + +L AC+ +G + G+ M + G+ +
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNV 262
Query: 363 LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL 421
L+DL +R GR+EEA+ + M V N V W +L+ G ++ K A E +++ + L
Sbjct: 263 LLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WNS + FAE G P + ++L+ + I PD FT LL AC + G+ +H
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y+ K+G NL N+LL LYA CG A+ +FD+M ++ +W
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW--------------- 291
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER-EGSRPNEVTVVAVLVACA 231
TS+I GLA G +EA+ +F ME EG P E+T V +L AC+
Sbjct: 292 ----------------TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 232 QLGDLEFG-KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM-RERTVVSW 289
G ++ G + R E + ++D+ + G +++ M + VV W
Sbjct: 336 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 395
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
+++ +H +++ ++PNH
Sbjct: 396 RTLLGACTVHGDSDLAEFARIQILQ--LEPNH 425
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/582 (39%), Positives = 338/582 (58%), Gaps = 42/582 (7%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ N ++ + G + + +F + ++ PDH+T +LKAC+ S IV GR IH
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWN-IMIGHL------- 164
K+G S L + N L+ +Y CG S ARL+ D+M ++DV +WN +++G+
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDD 224
Query: 165 -----------------------------ISAGDVGAARDLFDSMPRRNVRSWTSVISGL 195
+ +V +D+F M ++++ SW +I
Sbjct: 225 ALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVY 284
Query: 196 AKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNV 255
K M EA+ ++S ME +G P+ V++ +VL AC L GK IH + E + N+
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 256 YVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRS 315
+ NALIDMY KCGCLE+ VF+ M+ R VVSW++MI + + S
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 316 GMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 375
G+ P+ + F+ L ACSH GL+++GR F +M Y I P +EH C+VDLL RAG+++E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Query: 376 AREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAE 435
A I +MS+ PN VWGALLG CR+H + + A L +L P GYYV++SN+YA+
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524
Query: 436 AGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVK 495
AG+WEEV+ IR MKS+G+KK PG S++ ++ ++H F+ GD +HPQ+ I+ + L+ K
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKK 584
Query: 496 MKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTK-----PGMPIRIMKNLR 550
MK GY+PD+ L D+E+E KE L HSEKLA+V+ L+NTK IRI KNLR
Sbjct: 585 MKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLR 644
Query: 551 VCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
+C DCH A KL+S+I +REI++RD NRFH F+ G C+C DYW
Sbjct: 645 ICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 120 QSNLILQNMLLHLYASCG--ETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLF 177
Q + L +L Y T H+R++ + + +M + S DV +AR +F
Sbjct: 39 QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAY-ASLKDVASARKVF 97
Query: 178 DSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLE 237
D +P RNV +I G E ++VF M RP+ T VL AC+ G +
Sbjct: 98 DEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIV 157
Query: 238 FGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFA 297
G+ IH A G ++V N L+ MY KCG L E V D M R VVSW+S++VG+A
Sbjct: 158 IGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 298 MH 299
+
Sbjct: 218 QN 219
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++V WN + + + P + + L+ R+ PD + + +L AC +S + G+ IH
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
Y+++ NL+L+N L+ +YA CG AR +F+ M +DV
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV---------------- 376
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
SWT++IS G +A+ +FS+++ G P+ + V L AC+
Sbjct: 377 ---------------SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACS 421
Query: 232 QLGDLEFGKSIHRF 245
G LE G+S +
Sbjct: 422 HAGLLEEGRSCFKL 435
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 457 bits (1177), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/548 (41%), Positives = 331/548 (60%), Gaps = 10/548 (1%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D +V +V WN+ + +A+ G + LF S + D FT + ++ + +
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
R + + + N + N +L Y A+ +FD MP ++V+TWN MI
Sbjct: 299 EARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYA 354
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
G + A++LFD MP+R+ SW ++I+G ++ G S EALR+F +MEREG R N + +
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 226 VLVACAQLGDLEFGKSIH-RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER 284
L CA + LE GK +H R +G G+ +V NAL+ MY KCG +EE +F M +
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
+VSW++MI G++ H M R G+KP+ T + VL ACSH GLVDKGR++F
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKN 404
M +DYG++P +HY C+VDLL RAG LE+A ++ NM P+ +WG LLG R+H N
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 405 IKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSIT 464
+LAE A + ++P N G YV++SN+YA +G+W +V ++R M+ +GVKK PG S I
Sbjct: 594 TELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653
Query: 465 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRH 524
I H F GDE HP+ IF E+L ++MK GY+ TSVVL D+E+E+KE + H
Sbjct: 654 IQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYH 713
Query: 525 SEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNG 584
SE+LA+ YG++ G PIR++KNLRVCEDCH A+K ++ I R I++RD NRFH FK+G
Sbjct: 714 SERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDG 773
Query: 585 ACTCKDYW 592
+C+C DYW
Sbjct: 774 SCSCGDYW 781
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 160/356 (44%), Gaps = 55/356 (15%)
Query: 99 TISSDIVTGRIIHAY-VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATW 157
ISS + TGR A V K + + + N ++ Y GE AR +FD+MP++D+ +W
Sbjct: 70 AISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Query: 158 NIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR 217
N+MI + ++G AR+LF+ MP R+V SW +++SG A+ G ++A VF M +
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK--- 186
Query: 218 PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRV 277
N+V+ A+L A Q +E + + E + N L+ +VK + E +
Sbjct: 187 -NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS----WNCLLGGFVKKKKIVEARQF 241
Query: 278 FDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
FD M R VVSW+++I G+A G +
Sbjct: 242 FDSMNVRDVVSWNTIITGYA-----------------------------------QSGKI 266
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLG 397
D+ R+ F D V V + +V + +EEARE+ M N V W A+L
Sbjct: 267 DEARQLF-----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLA 320
Query: 398 GCRLHKNIKLAEEAMRHLSELDPL-NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
G + +++A+E L ++ P N + M YA+ GK E + M R
Sbjct: 321 GYVQGERMEMAKE----LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/550 (40%), Positives = 336/550 (61%), Gaps = 2/550 (0%)
Query: 45 VDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQL--SILPDHFTCSFLLKACTISS 102
+D + P + NS ++ + P + + R+ + PD++T +FL++ACT
Sbjct: 63 LDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLR 122
Query: 103 DIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIG 162
TG +H + GF ++ +Q L+ LYA G +F+ +P D M+
Sbjct: 123 MRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVT 182
Query: 163 HLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
GDV AR LF+ MP R+ +W ++ISG A+ G S EAL VF M+ EG + N V
Sbjct: 183 ACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVA 242
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+++VL AC QLG L+ G+ H + E N V + L+D+Y KCG +E+ VF GM
Sbjct: 243 MISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME 302
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
E+ V +WSS + G AM+ M + G+ PN VTF+ VL CS VG VD+G+
Sbjct: 303 EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
F MR ++GI P +EHYGCLVDL +RAGRLE+A +I M + P+ VW +LL R++
Sbjct: 363 HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSS 462
KN++L A + + EL+ N G YV++SN+YA++ W+ VS +R+SMKS+GV+K PGCS
Sbjct: 423 KNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSV 482
Query: 463 ITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLY 522
+ ++G VHEF GD++HP+ I +W+ + ++++ GY DT+ V+ D+++E+KE L
Sbjct: 483 MEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALC 542
Query: 523 RHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFK 582
HSEK A+ +G+++ K +PIRI+KNLRVC DCH ++S+I NREI+VRDRNRFH FK
Sbjct: 543 LHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFK 602
Query: 583 NGACTCKDYW 592
+G C+C +W
Sbjct: 603 DGHCSCNGFW 612
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/545 (40%), Positives = 335/545 (61%), Gaps = 33/545 (6%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
V +V WN+ + +AE G + + LF + + ++ PD T ++ AC S I GR
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H ++ GF SNL + N L+ LY+ CGE
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGE------------------------------- 316
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+ A LF+ +P ++V SW ++I G + +EAL +F EM R G PN+VT++++L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 230 CAQLGDLEFGKSIHRFAEG--NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
CA LG ++ G+ IH + + G + +LIDMY KCG +E +VF+ + +++
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
SW++MI GFAMH M + G++P+ +TF+G+L ACSH G++D GR F M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
+DY + P +EHYGC++DLL +G +EA E+I M + P+GV+W +LL C++H N++L
Sbjct: 497 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 556
Query: 408 AEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
E +L +++P N G YV++SN+YA AG+W EV++ R + +G+KK PGCSSI ID
Sbjct: 557 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Query: 468 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEK 527
VVHEF+ GD+ HP+ + I+ M E++ V ++ G++PDTS VL +ME+E KE L HSEK
Sbjct: 617 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEK 676
Query: 528 LALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACT 587
LA+ +GLI+TKPG + I+KNLRVC +CH A KL+S+I REI+ RDR RFH F++G C+
Sbjct: 677 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 736
Query: 588 CKDYW 592
C DYW
Sbjct: 737 CNDYW 741
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 195/353 (55%), Gaps = 2/353 (0%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P ++ WN+ + A P + L++ + L +LP+ +T F+LK+C S G+ I
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H +V KLG +L + L+ +Y G A +FDK P +DV ++ +I S G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
A+ LFD +P ++V SW ++ISG A+ G +EAL +F +M + RP+E T+V V+ AC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
AQ G +E G+ +H + + +GF N+ + NALID+Y KCG LE C +F+ + + V+SW+
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT-IMRR 349
++I G+ M+RSG PN VT + +L AC+H+G +D GR I +R
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
G+ L+D+ ++ G +E A +V N + + W A++ G +H
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVF-NSILHKSLSSWNAMIFGFAMH 448
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A +F ++ N+ W ++ G A AL+++ M G PN T VL +CA+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER-------- 284
+ G+ IH G ++YV +LI MYV+ G LE+ +VFD R
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 285 -----------------------TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
VVSW++MI G+A M+++ ++P+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 322 VTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 381
T + V+ AC+ G ++ GR+ + D+G ++ L+DL S+ G LE A +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWI-DDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 382 NMSVPPNGVV-WGALLGGCRLHKNIKLAEEAMRHLSEL 418
+ P V+ W L+GG + ++ L +EA+ E+
Sbjct: 326 RL--PYKDVISWNTLIGG---YTHMNLYKEALLLFQEM 358
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/544 (41%), Positives = 331/544 (60%), Gaps = 4/544 (0%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRIIH 111
IV WNS + F +RG + +F ++ + S+L PD FT + +L AC + G+ IH
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD--VATWNIMIGHLISAGD 169
+++ GF + I+ N L+ +Y+ CG AR + ++ +D + + ++ I GD
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+ A+++F S+ R+V +WT++I G + G EA+ +F M G RPN T+ A+L
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR-ERTVVS 288
+ L L GK IH A +G + +V V NALI MY K G + R FD +R ER VS
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
W+SMI+ A H M+ G++P+H+T++GV AC+H GLV++GR++F +M+
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
I+P + HY C+VDL RAG L+EA+E I M + P+ V WG+LL CR+HKNI L
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG 602
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGV 468
+ A L L+P N G Y ++N+Y+ GKWEE ++IR+SMK VKK G S I +
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662
Query: 469 VHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKL 528
VH F D THP+ I+ +K+ ++K GY+PDT+ VL D+E+E KE L HSEKL
Sbjct: 663 VHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKL 722
Query: 529 ALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTC 588
A+ +GLI+T +RIMKNLRVC DCHTA+K +S++ REI+VRD RFH FK+G C+C
Sbjct: 723 AIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSC 782
Query: 589 KDYW 592
+DYW
Sbjct: 783 RDYW 786
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 181/393 (46%), Gaps = 38/393 (9%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W + + + G I + + + I P FT + +L + + + TG+ +H++
Sbjct: 112 VSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSF 171
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ KLG + N+ + N LL++YA CG+ A+ +FD+M +D+++WN MI + G + A
Sbjct: 172 IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLA 231
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREG-SRPNEVTVVAVLVACAQ 232
F+ M R++ +W S+ISG + G AL +FS+M R+ P+ T+ +VL ACA
Sbjct: 232 MAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCR---------------- 276
L L GK IH GF + V NALI MY +CG +E R
Sbjct: 292 LEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFT 351
Query: 277 -----------------VFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
+F +++R VV+W++MIVG+ H M+ G +P
Sbjct: 352 ALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
N T +L S + + G++ + G + V L+ + ++AG + A
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 380 IANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ + V W +++ H + AEEA+
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGH---AEEAL 500
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 180/397 (45%), Gaps = 38/397 (9%)
Query: 91 CSFLL-KACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM 149
C+ LL K+ S+ T +++H V K G ++ L N L+++Y+ G HAR +FD+M
Sbjct: 16 CTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEM 75
Query: 150 PQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFS 209
P + +WN ++ GD+ + + FD +P+R+ SWT++I G G +A+RV
Sbjct: 76 PLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMG 135
Query: 210 EMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC- 268
+M +EG P + T+ VL + A +E GK +H F G NV V N+L++MY KC
Sbjct: 136 DMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Query: 269 ------------------------------GCLEEGCRVFDGMRERTVVSWSSMIVGFAM 298
G ++ F+ M ER +V+W+SMI GF
Sbjct: 196 DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 299 HXXXXXXXXXXXXMIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGV 357
M+R S + P+ T VL AC+++ + G++ + + + G+
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 358 EHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGGCRLHKNIKLAEEAMRHLS 416
L+ + SR G +E AR +I + + ALL G ++ A+ L
Sbjct: 316 V-LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 417 ELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRG 453
+ D + + M Y + G + E + RSM G
Sbjct: 375 DRDVVA---WTAMIVGYEQHGSYGEAINLFRSMVGGG 408
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/541 (41%), Positives = 333/541 (61%), Gaps = 4/541 (0%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
W + ++ +A G + I+++ +R+ I P FT S LLKAC D+ GR HA
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF 176
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
+L + + N ++ +Y C AR +FD+MP++DV +W +I G++ A +
Sbjct: 177 RLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAE 236
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
LF+S+P +++ +WT++++G A+ +EAL F ME+ G R +EVTV + ACAQLG
Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGA 296
Query: 236 LEFGKSIHRFAEGNGFL--RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
++ + A+ +G+ +V + +ALIDMY KCG +EE VF M + V ++SSMI
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 294 VGFAMHXXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
+G A H M+ ++ +KPN VTF+G L ACSH GLVD+GR+ F M + +G
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ P +HY C+VDLL R GRL+EA E+I MSV P+G VWGALLG CR+H N ++AE A
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAA 476
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS-SITIDGVVHE 471
HL EL+P G Y+++SNVYA AG W V R+R+ +K +G+KKTP S + +G +H+
Sbjct: 477 EHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHK 536
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALV 531
F G+ HP + I + E+L+ ++ + GY PD S V D+ D K + L +H+EKLAL
Sbjct: 537 FFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALA 596
Query: 532 YGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDY 591
+ L+ T I IMKNLR+C DCH ++L SE+ + I++RD RFH F++G C+C D+
Sbjct: 597 FSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDF 656
Query: 592 W 592
W
Sbjct: 657 W 657
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 121/273 (44%), Gaps = 38/273 (13%)
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
AR + + + RN WT+VI G A G +EA+ ++ M +E P T A+L AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 233 LGDLEFGKSIH-RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS--- 288
+ DL G+ H + GF VYV N +IDMYVKC ++ +VFD M ER V+S
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 289 ----------------------------WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPN 320
W++M+ GFA + M +SG++ +
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 321 HVTFIGVLHACSHVGLVDKGREFFTIMRRD-YGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
VT G + AC+ +G I ++ Y V L+D+ S+ G +EEA V
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 380 IANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+M+ N + +++ G H A+EA+
Sbjct: 341 FMSMN-NKNVFTYSSMILGLATHGR---AQEAL 369
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 41/236 (17%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACT-ISSDIVTGRIIH 111
+V W + + FA+ P + + F R+ + I D T + + AC + + R +
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 112 AYVQKLGF--QSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
QK G+ ++++ + L+ +Y+ CG A +F M ++V T
Sbjct: 306 -IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFT------------- 351
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLV 228
++S+I GLA G ++EAL +F M + +PN VT V L+
Sbjct: 352 ------------------YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALM 393
Query: 229 ACAQLGDLEFGKSIHRF---AEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
AC+ G ++ G+ + G R+ Y C ++D+ + G L+E + M
Sbjct: 394 ACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC--MVDLLGRTGRLQEALELIKTM 447
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/576 (39%), Positives = 343/576 (59%), Gaps = 34/576 (5%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRI 109
P +N+ ++ ++E P +++++F+ + R+ + PD F+ +F++KA + TG
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H K G +S+L + L+ +Y CG AR +FD+M Q ++ WN +I D
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM------------------ 211
V AR++FD M RN SW +++G K G E A R+FSEM
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 212 -------------EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVC 258
+R G PNEV++ VL AC+Q G EFGK +H F E G+ V V
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVN 307
Query: 259 NALIDMYVKCGCLEEGCRVFDGMRE-RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM 317
NALIDMY +CG + VF+GM+E R +VSW+SMI G AMH M G+
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 318 KPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 377
P+ ++FI +LHACSH GL+++G ++F+ M+R Y I P +EHYGC+VDL R+G+L++A
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 427
Query: 378 EVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAG 437
+ I M +PP +VW LLG C H NI+LAE+ + L+ELDP N G V++SN YA AG
Sbjct: 428 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487
Query: 438 KWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMK 497
KW++V+ IR+SM + +KKT S + + +++F AG++ E +++++++K
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLK 547
Query: 498 MK-GYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCH 556
+ GY P+ + L D+E+E+KE + +HSEKLAL + L G IRI+KNLR+C DCH
Sbjct: 548 DEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCH 607
Query: 557 TALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
+KL S++ EI+VRDRNRFH FK+G+C+C+DYW
Sbjct: 608 AVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/543 (39%), Positives = 327/543 (60%), Gaps = 32/543 (5%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P IV +NS + ++ P + SLF+ + + ILPD++T LLKAC ++ + GR +
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H KLG N+ + L+++Y C DV
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECE-------------------------------DV 180
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
+AR +FD + V + ++I+G A+ EAL +F EM+ + +PNE+T+++VL +C
Sbjct: 181 DSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
A LG L+ GK IH++A+ + F + V V ALIDM+ KCG L++ +F+ MR + +WS
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
+MIV +A H M ++P+ +TF+G+L+ACSH G V++GR++F+ M
Sbjct: 301 AMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
+GIVP ++HYG +VDLLSRAG LE+A E I + + P ++W LL C H N+ LAE+
Sbjct: 361 FGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEK 420
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
+ ELD + G YV++SN+YA KWE V +R+ MK R K PGCSSI ++ VVH
Sbjct: 421 VSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVH 480
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL-LDMEDEQKEIFLYRHSEKLA 529
EF +GD + ++++ ++K+ GY+PDTS+V+ +M D++KEI L HSEKLA
Sbjct: 481 EFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLA 540
Query: 530 LVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCK 589
+ +GL+NT PG IR++KNLRVC DCH A KL+S I R++V+RD RFH F++G C+C
Sbjct: 541 ITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCG 600
Query: 590 DYW 592
D+W
Sbjct: 601 DFW 603
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 9/291 (3%)
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
+ + AR LF++M ++ + S+ G ++ E +F E+ +G P+ T +
Sbjct: 75 TESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPS 134
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
+L ACA LE G+ +H + G NVYVC LI+MY +C ++ VFD + E
Sbjct: 135 LLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC 194
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
VV +++MI G+A M +KPN +T + VL +C+ +G +D G+
Sbjct: 195 VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHK 254
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
++ + V+ L+D+ ++ G L++A + M + W A++ + N
Sbjct: 255 YAKK-HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY-KDTQAWSAMIVA---YANH 309
Query: 406 KLAEEAM----RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
AE++M R SE ++ ++ + N + G+ EE + M S+
Sbjct: 310 GKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 328/556 (58%), Gaps = 5/556 (0%)
Query: 42 LSHVDLAHVPA-IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTI 100
LS ++ + + A IV WN L F G + + +F ++ L PD T S +L +
Sbjct: 205 LSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD 264
Query: 101 SSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIM 160
S + GR+IH YV K G + + + ++ +Y G +F++ + N
Sbjct: 265 SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAY 324
Query: 161 IGHLISAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGS 216
I L G V A ++F+ + NV SWTS+I+G A+ G EAL +F EM+ G
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 217 RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCR 276
+PN VT+ ++L AC + L G+S H FA L NV+V +ALIDMY KCG +
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 277 VFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGL 336
VF+ M + +V W+S++ GF+MH ++R+ +KP+ ++F +L AC VGL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 337 VDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
D+G ++F +M +YGI P +EHY C+V+LL RAG+L+EA ++I M P+ VWGALL
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Query: 397 GGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKK 456
CRL N+ LAE A L L+P N G YV++SN+YA G W EV IR M+S G+KK
Sbjct: 565 NSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 457 TPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQ 516
PGCS I + V+ +AGD++HPQ I E +++ +M+ G+ P+ L D+E+++
Sbjct: 625 NPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQE 684
Query: 517 KEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRN 576
+E L+ HSEKLA+V+GL+NT G P++++KNLR+C DCH +K +S REI +RD N
Sbjct: 685 QEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTN 744
Query: 577 RFHCFKNGACTCKDYW 592
RFH FK+G C+C D+W
Sbjct: 745 RFHHFKDGICSCGDFW 760
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 172/395 (43%), Gaps = 41/395 (10%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P I ++S + + +I +F R+ ++PD L K C S G+ I
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H G + +Q + H+Y CG AR +FD+M +DV T + ++ G +
Sbjct: 139 HCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCL 198
Query: 171 GAARDLFDSMP----RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
+ M N+ SW ++SG + G +EA+ +F ++ G P++VTV +V
Sbjct: 199 EEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSV 258
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC------------------ 268
L + L G+ IH + G L++ V +A+IDMY K
Sbjct: 259 LPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEA 318
Query: 269 -------------GCLEEGCRVFDGMRERT----VVSWSSMIVGFAMHXXXXXXXXXXXX 311
G +++ +F+ +E+T VVSW+S+I G A +
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 312 MIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAG 371
M +G+KPNHVT +L AC ++ + GR R + ++ V L+D+ ++ G
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCG 437
Query: 372 RLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK 406
R+ + +++ NM N V W +L+ G +H K
Sbjct: 438 RINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGKAK 471
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%)
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
+ S+P + S++S+I L K + +++ VFS M G P+ + + CA+L
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
+ GK IH + +G + +V ++ MY++CG + + +VFD M ++ VV+ S+++
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG 335
+A M SG++ N V++ G+L + G
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG 231
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/588 (40%), Positives = 338/588 (57%), Gaps = 47/588 (7%)
Query: 18 LDHATSQNHHLKQARALLIKTNAPLSHVDLAHV-------PAIVPWNSCLKFFAERGAPC 70
LD+ + Q+ L LI + L VD A I WN+ + G
Sbjct: 104 LDNGSDQDPFLATK---LIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 71 DTISLFLRLRQLSILPDHFTCSFLLKACTIS----SDIVTGRIIHAYVQKLGFQSNLILQ 126
+ + L+ ++ ++ + D FT +++LKAC S + ++ G+ IHA++ + G+ S++ +
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220
Query: 127 NMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR 186
L+ +YA G +A +F MP RNV
Sbjct: 221 TTLVDMYARFGCVDYASY-------------------------------VFGGMPVRNVV 249
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMERE--GSRPNEVTVVAVLVACAQLGDLEFGKSIHR 244
SW+++I+ AK G + EALR F EM RE S PN VT+V+VL ACA L LE GK IH
Sbjct: 250 SWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHG 309
Query: 245 FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXX 304
+ G + V +AL+ MY +CG LE G RVFD M +R VVSW+S+I + +H
Sbjct: 310 YILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKK 369
Query: 305 XXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLV 364
M+ +G P VTF+ VL ACSH GLV++G+ F M RD+GI P +EHY C+V
Sbjct: 370 AIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMV 429
Query: 365 DLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDG 424
DLL RA RL+EA +++ +M P VWG+LLG CR+H N++LAE A R L L+P N G
Sbjct: 430 DLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAG 489
Query: 425 YYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 484
YV+++++YAEA W+EV R+++ ++ RG++K PG + + ++ FV+ DE +P +
Sbjct: 490 NYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQ 549
Query: 485 IFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIR 544
I KL MK KGYIP T VL ++E E+KE + HSEKLAL +GLINT G PIR
Sbjct: 550 IHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIR 609
Query: 545 IMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
I KNLR+CEDCH K +S+ +EI+VRD NRFH FKNG C+C DYW
Sbjct: 610 ITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 20/326 (6%)
Query: 143 RLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSE 202
R + D QD +IG G V AR +FD +R + W ++ L G E
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 203 EALRVFSEMEREGSRPNEVTVVAVLVACA----QLGDLEFGKSIHRFAEGNGFLRNVYVC 258
E L ++ +M R G + T VL AC + L GK IH G+ +VY+
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220
Query: 259 NALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR--SG 316
L+DMY + GC++ VF GM R VVSWS+MI +A + M+R
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFF-TIMRRDY-GIVPGVEHYGCLVDLLSRAGRLE 374
PN VT + VL AC+ + +++G+ I+RR I+P + LV + R G+LE
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLE 337
Query: 375 EAREVIANMSVPPNGVVWGALLGGCRLH----KNIKLAEEAMRHLSELDPLNDGYYVVMS 430
+ V M + V W +L+ +H K I++ EE + + + P+ +V +
Sbjct: 338 VGQRVFDRMH-DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVT---FVSVL 393
Query: 431 NVYAEAGKWEEVSRIRRSM-KSRGVK 455
+ G EE R+ +M + G+K
Sbjct: 394 GACSHEGLVEEGKRLFETMWRDHGIK 419
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 15/237 (6%)
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA 246
S +I L K G ++A+RV S+ S P++ T +++ C L +HR
Sbjct: 48 SNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 247 EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXX 306
NG ++ ++ LI MY G ++ +VFD R+RT+ W+++ +
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 307 XXXXXMIRSGMKPNHVTFIGVLHAC----SHVGLVDKGREFFT-IMRRDYGIVPGVEHYG 361
M R G++ + T+ VL AC V + KG+E + RR Y V
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS--SHVYIMT 221
Query: 362 CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
LVD+ +R G ++ A V M V N V W A++ C KN K A EA+R E+
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPV-RNVVSWSAMI-AC-YAKNGK-AFEALRTFREM 274
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/537 (39%), Positives = 326/537 (60%), Gaps = 1/537 (0%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQK 116
N+ + +G + + +F + + PD + + +C+ +I+ G+ H YV +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 117 LGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDL 176
GF+S + N L+ +Y C A +FD+M + V TWN ++ + G+V AA +
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME-REGSRPNEVTVVAVLVACAQLGD 235
F++MP +N+ SW ++ISGL + + EEA+ VF M+ +EG + VT++++ AC LG
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
L+ K I+ + E NG +V + L+DM+ +CG E +F+ + R V +W++ I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVP 355
AM MI G+KP+ V F+G L ACSH GLV +G+E F M + +G+ P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 356 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHL 415
HYGC+VDLL RAG LEEA ++I +M + PN V+W +LL CR+ N+++A A +
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
Query: 416 SELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAG 475
L P G YV++SNVYA AG+W +++++R SMK +G++K PG SSI I G HEF +G
Sbjct: 666 QVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSG 725
Query: 476 DETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLI 535
DE+HP+ I M +++ + G++PD S VL+D+++++K L RHSEKLA+ YGLI
Sbjct: 726 DESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLI 785
Query: 536 NTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
++ G IRI+KNLRVC DCH+ K S++ NREI++RD NRFH + G C+C D+W
Sbjct: 786 SSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 206/449 (45%), Gaps = 49/449 (10%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
+NS ++ +A G + I LFLR+ I PD +T F L AC S G IH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K+G+ +L +QN L+H YA CGE AR +FD+M +++V +W
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW------------------ 203
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER-EGSRPNEVTVVAVLVACAQLG 234
TS+I G A+ +++A+ +F M R E PN VT+V V+ ACA+L
Sbjct: 204 -------------TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLE 250
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
DLE G+ ++ F +G N + +AL+DMY+KC ++ R+FD + ++M
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIV 354
+ M+ SG++P+ ++ + + +CS + + G+ + R+
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN---- 366
Query: 355 PGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
G E + L+D+ + R + A + MS V W +++ G + + A E
Sbjct: 367 -GFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
+ E + ++ + ++S + + +EE + SM+S+ G + ++I
Sbjct: 425 TFETMPEKNIVS--WNTIISGL-VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMK 499
A D AK I+ EK +++ ++
Sbjct: 482 HLGALD----LAKWIYYYIEKNGIQLDVR 506
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 163/365 (44%), Gaps = 65/365 (17%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+V W S + +A R D + LF R+ R + P+ T ++ AC D+ TG ++
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
A+++ G + N ++ + L+ +Y C A+ +FD+ ++
Sbjct: 260 AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL----------------- 302
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
DL ++M VR G++ EAL VF+ M G RP+ +++++ + +C+
Sbjct: 303 ---DLCNAMASNYVRQ-----------GLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
QL ++ +GKS H + NGF +CNALIDMY+KC + R+FD M +TVV+W+S
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 292 MIVGFAMHXXXXXXXXXXXXM--------------------------------IRSGMKP 319
++ G+ + M + G+
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
+ VT + + AC H+G +D + + + ++ GI V LVD+ SR G E A +
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Query: 380 IANMS 384
+++
Sbjct: 528 FNSLT 532
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/549 (39%), Positives = 323/549 (58%), Gaps = 33/549 (6%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D H P I WN+ K + P +++ L+ ++R L + PD FT F++KA + D
Sbjct: 67 DEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFS 126
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
G +HA+V K GF I+ L+ +Y GE S A
Sbjct: 127 CGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEF--------------------- 165
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
LF+SM +++ +W + ++ + G S AL F++M + + + TVV+
Sbjct: 166 ----------LFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVS 215
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
+L AC QLG LE G+ I+ A N+ V NA +DM++KCG E +F+ M++R
Sbjct: 216 MLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRN 275
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
VVSWS+MIVG+AM+ M G++PN+VTF+GVL ACSH GLV++G+ +F+
Sbjct: 276 VVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFS 335
Query: 346 IM--RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK 403
+M D + P EHY C+VDLL R+G LEEA E I M V P+ +WGALLG C +H+
Sbjct: 336 LMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHR 395
Query: 404 NIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
++ L ++ L E P Y+V++SN+YA AGKW+ V ++R M+ G KK SS+
Sbjct: 396 DMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
Query: 464 TIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYR 523
+G +H F GD++HPQ+K I+E +++L K++ GY+PDT V D+E E+KE L
Sbjct: 456 EFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSH 515
Query: 524 HSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKN 583
HSEKLA+ +GLI +PG PIR+MKNLR C+DCH K VS + + EI++RD+NRFH F+N
Sbjct: 516 HSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRN 575
Query: 584 GACTCKDYW 592
G C+CK++W
Sbjct: 576 GVCSCKEFW 584
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 8/242 (3%)
Query: 160 MIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPN 219
++ +L+ GD+ AR +FD M + + W ++ G + + E+L ++ +M G RP+
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPD 108
Query: 220 EVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFD 279
E T V+ A +QLGD G ++H GF V L+ MY+K G L +F+
Sbjct: 109 EFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE 168
Query: 280 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDK 339
M+ + +V+W++ + M ++ + T + +L AC +G ++
Sbjct: 169 SMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEI 228
Query: 340 GREFFTIMRR---DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
G E + R+ D I+ VE+ +D+ + G E AR + M N V W ++
Sbjct: 229 GEEIYDRARKEEIDCNII--VEN--ARLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMI 283
Query: 397 GG 398
G
Sbjct: 284 VG 285
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/546 (39%), Positives = 327/546 (59%), Gaps = 6/546 (1%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN+ ++ + G + LF ++ +++PD ++ AC + ++ R I+
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE 236
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
++ + + + L L+ +YA G AR F KM +++ M+ G +
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A+ +FD ++++ WT++IS + +EALRVF EM G +P+ V++ +V+ ACA
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
LG L+ K +H NG + + NALI+MY KCG L+ VF+ M R VVSWSSM
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I +MH M + ++PN VTF+GVL+ CSH GLV++G++ F M +Y
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
I P +EHYGC+VDL RA L EA EVI +M V N V+WG+L+ CR+H ++L + A
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAA 536
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
+ + EL+P +DG V+MSN+YA +WE+V IRR M+ + V K G S I +G HEF
Sbjct: 537 KRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEF 596
Query: 473 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVY 532
+ GD+ H Q+ I+ ++++ K+K+ GY+PD VL+D+E+E+K+ + HSEKLAL +
Sbjct: 597 LIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCF 656
Query: 533 GLINTKPGMP------IRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGAC 586
GL+N + IRI+KNLRVCEDCH KLVS++ REI+VRDR RFHC+KNG C
Sbjct: 657 GLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLC 716
Query: 587 TCKDYW 592
+C+DYW
Sbjct: 717 SCRDYW 722
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 165/356 (46%), Gaps = 10/356 (2%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P + +N L+ + P TI + R+R + D F+ +LKA + S + G +
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H K+ + ++ + +YASCG ++AR +FD+M +DV TWN MI G V
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 171 GAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
A LF+ M NV +++S + G ++ + R + + A+
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
+ A G ++ + R +RN++V A++ Y KCG L++ +FD ++ +
Sbjct: 254 VTMYAGAGCMDMAREFFRKMS----VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
V W++MI + M SG+KP+ V+ V+ AC+++G++DK + +
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 347 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
+ + G+ + L+++ ++ G L+ R+V M N V W +++ +H
Sbjct: 370 IHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMH 423
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 316/492 (64%), Gaps = 32/492 (6%)
Query: 102 SDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMI 161
+D+ G IH+ V + GF S + +QN LLHLYA+CG
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------------------ 37
Query: 162 GHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
DV +A +FD MP +++ +W SVI+G A+ G EEAL +++EM +G +P+
Sbjct: 38 -------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 90
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
T+V++L ACA++G L GK +H + G RN++ N L+D+Y +CG +EE +FD M
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Query: 282 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRS-GMKPNHVTFIGVLHACSHVGLVDKG 340
++ VSW+S+IVG A++ M + G+ P +TF+G+L+ACSH G+V +G
Sbjct: 151 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
Query: 341 REFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCR 400
E+F MR +Y I P +EH+GC+VDLL+RAG++++A E I +M + PN V+W LLG C
Sbjct: 211 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 270
Query: 401 LHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGC 460
+H + LAE A + +L+P + G YV++SN+YA +W +V +IR+ M GVKK PG
Sbjct: 271 VHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGH 330
Query: 461 SSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIF 520
S + + VHEF+ GD++HPQ+ I+ +++ +++ +GY+P S V +D+E+E+KE
Sbjct: 331 SLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENA 390
Query: 521 LYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHC 580
+ HSEK+A+ + LI+T PI ++KNLRVC DCH A+KLVS++ NREIVVRDR+RFH
Sbjct: 391 VVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHH 450
Query: 581 FKNGACTCKDYW 592
FKNG+C+C+DYW
Sbjct: 451 FKNGSCSCQDYW 462
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WNS + FAE G P + ++L+ + I PD FT LL AC + G+ +H
Sbjct: 54 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 113
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y+ K+G NL N+LL LYA CG A+ +FD+M ++ +W
Sbjct: 114 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW--------------- 158
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER-EGSRPNEVTVVAVLVACA 231
TS+I GLA G +EA+ +F ME EG P E+T V +L AC+
Sbjct: 159 ----------------TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 202
Query: 232 QLGDLEFG-KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM-RERTVVSW 289
G ++ G + R E + ++D+ + G +++ M + VV W
Sbjct: 203 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 262
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
+++ +H +++ ++PNH
Sbjct: 263 RTLLGACTVHGDSDLAEFARIQILQ--LEPNH 292
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ D+ G++IH +GF +YV N+L+ +Y CG + +VFD M E+ +V+W+S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I GFA + M G+KP+ T + +L AC+ +G + G+ M + G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ + L+DL +R GR+EEA+ + M V N V W +L+ G ++ K A E
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 413 RHLSELDPL 421
+++ + L
Sbjct: 179 KYMESTEGL 187
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/536 (38%), Positives = 325/536 (60%), Gaps = 1/536 (0%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQK 116
N+ + +G + + +F + + PD + + +C+ +I+ G+ H YV +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 117 LGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDL 176
GF+S + N L+ +Y C A +FD+M + V TWN ++ + G+V AA +
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME-REGSRPNEVTVVAVLVACAQLGD 235
F++MP +N+ SW ++ISGL + + EEA+ VF M+ +EG + VT++++ AC LG
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
L+ K I+ + E NG +V + L+DM+ +CG E +F+ + R V +W++ I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVP 355
AM MI G+KP+ V F+G L ACSH GLV +G+E F M + +G+ P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 356 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHL 415
HYGC+VDLL RAG LEEA ++I +M + PN V+W +LL CR+ N+++A A +
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
Query: 416 SELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAG 475
L P G YV++SNVYA AG+W +++++R SMK +G++K PG SSI I G HEF +G
Sbjct: 666 QVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSG 725
Query: 476 DETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLI 535
DE+HP+ I M +++ + G++PD S VL+D+++++K L RHSEKLA+ YGLI
Sbjct: 726 DESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLI 785
Query: 536 NTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDY 591
++ G IRI+KNLRVC DCH+ K S++ NREI++RD NRFH + G C+C D+
Sbjct: 786 SSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 206/449 (45%), Gaps = 49/449 (10%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
+NS ++ +A G + I LFLR+ I PD +T F L AC S G IH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K+G+ +L +QN L+H YA CGE AR +FD+M +++V +W
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW------------------ 203
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER-EGSRPNEVTVVAVLVACAQLG 234
TS+I G A+ +++A+ +F M R E PN VT+V V+ ACA+L
Sbjct: 204 -------------TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLE 250
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
DLE G+ ++ F +G N + +AL+DMY+KC ++ R+FD + ++M
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIV 354
+ M+ SG++P+ ++ + + +CS + + G+ + R+
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN---- 366
Query: 355 PGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
G E + L+D+ + R + A + MS V W +++ G + + A E
Sbjct: 367 -GFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
+ E + ++ + ++S + + +EE + SM+S+ G + ++I
Sbjct: 425 TFETMPEKNIVS--WNTIISGL-VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMK 499
A D AK I+ EK +++ ++
Sbjct: 482 HLGALD----LAKWIYYYIEKNGIQLDVR 506
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 163/365 (44%), Gaps = 65/365 (17%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+V W S + +A R D + LF R+ R + P+ T ++ AC D+ TG ++
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
A+++ G + N ++ + L+ +Y C A+ +FD+ ++
Sbjct: 260 AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL----------------- 302
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
DL ++M VR G++ EAL VF+ M G RP+ +++++ + +C+
Sbjct: 303 ---DLCNAMASNYVRQ-----------GLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
QL ++ +GKS H + NGF +CNALIDMY+KC + R+FD M +TVV+W+S
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 292 MIVGFAMHXXXXXXXXXXXXM--------------------------------IRSGMKP 319
++ G+ + M + G+
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
+ VT + + AC H+G +D + + + ++ GI V LVD+ SR G E A +
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Query: 380 IANMS 384
+++
Sbjct: 528 FNSLT 532
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/544 (38%), Positives = 320/544 (58%), Gaps = 8/544 (1%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V +N+ + + RG + + + R+ I D FT +++AC + + G+ +HA
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 113 YV---QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
YV + F N L+ LY CG+ AR +F+KMP +D+ +WN ++ +S+G
Sbjct: 311 YVLRREDFSFH----FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+G A+ +F M +N+ SW +ISGLA+ G EE L++FS M+REG P + + +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
CA LG G+ H GF ++ NALI MY KCG +EE +VF M VSW
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+++I H M++ G++P+ +T + VL ACSH GLVD+GR++F M
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
Y I PG +HY L+DLL R+G+ +A VI ++ P +W ALL GCR+H N++L
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
A L L P +DG Y+++SN++A G+WEEV+R+R+ M+ RGVKK CS I ++ V
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDME-DEQKEIFLYRHSEKL 528
H F+ D +HP+A+ ++ + L +M+ GY+PDTS VL D+E D KE L HSEK+
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKI 726
Query: 529 ALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTC 588
A+ +GL+ PG IRI KNLR C DCH + +S + R+I++RDR RFH F+NG C+C
Sbjct: 727 AVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSC 786
Query: 589 KDYW 592
++W
Sbjct: 787 GNFW 790
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 182/423 (43%), Gaps = 61/423 (14%)
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
R +H + GFQ + N L+ +Y E ++AR +FD++ + D M+ +
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 167 AGDVGAARDLFDSMP--RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
+GD+ AR +F+ P R+ + ++I+G + A+ +F +M+ EG +P+ T
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 225 AVLVACAQLGDLEFGKSIHRF-----AEGNGFLRNVYVCNALIDMYVKCGC----LEEGC 275
+VL A + D E K +F G G++ + V NAL+ +Y KC L
Sbjct: 153 SVLAGLALVADDE--KQCVQFHAAALKSGAGYITS--VSNALVSVYSKCASSPSLLHSAR 208
Query: 276 RVFDGMRERTVVSWSSMIVGFAMHXX--------------------------------XX 303
+VFD + E+ SW++M+ G+ +
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 304 XXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREF--FTIMRRDYGIVPGVEHY- 360
M+ SG++ + T+ V+ AC+ GL+ G++ + + R D+ H+
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFD 323
Query: 361 GCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDP 420
LV L + G+ +EAR + M + V W ALL G +I A+ + + E +
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 421 LNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITID--GVVHEFVAGDET 478
L+ +++M + AE G EE ++ MK G + S I V+ + G +
Sbjct: 383 LS---WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 479 HPQ 481
H Q
Sbjct: 440 HAQ 442
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 162/385 (42%), Gaps = 38/385 (9%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI-IHA 112
V +N+ + F+ I+LF +++ PD+FT + +L + +D + HA
Sbjct: 114 VMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHA 173
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETS----HARLMFDKMPQQDVATWNIMIGHLISAG 168
K G + N L+ +Y+ C + AR +FD++ ++D +W M+ + G
Sbjct: 174 AALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNG 233
Query: 169 DVGAARDLFDSMPRR-NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
+L + M + ++ ++ISG G +EAL + M G +E T +V+
Sbjct: 234 YFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVI 293
Query: 228 VACAQLGDLEFGKSIH---------RFAEGNGFLRNVYVC-------------------- 258
ACA G L+ GK +H F N + Y C
Sbjct: 294 RACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVS 353
Query: 259 -NALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM 317
NAL+ YV G + E +F M+E+ ++SW MI G A + M R G
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413
Query: 318 KPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 377
+P F G + +C+ +G G+++ + + G + L+ + ++ G +EEAR
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEAR 472
Query: 378 EVIANMSVPPNGVVWGALLGGCRLH 402
+V M + V W AL+ H
Sbjct: 473 QVFRTMPC-LDSVSWNALIAALGQH 496
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/542 (39%), Positives = 309/542 (57%), Gaps = 34/542 (6%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P IV +N+ + + G ++SLF ++L + S L+ +S ++ I
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLF---KELMLSGARLRSSTLVSLVPVSGHLMLIYAI 341
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H Y K F S+ + L +Y+ E +
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYSKLNE-------------------------------I 370
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
+AR LFD P +++ SW ++ISG + G++E+A+ +F EM++ PN VT+ +L AC
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
AQLG L GK +H F ++YV ALI MY KCG + E R+FD M ++ V+W+
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
+MI G+ +H M+ SG+ P VTF+ VL+ACSH GLV +G E F M
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
YG P V+HY C+VD+L RAG L+ A + I MS+ P VW LLG CR+HK+ LA
Sbjct: 551 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
L ELDP N GY+V++SN+++ + + + +R++ K R + K PG + I I H
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLAL 530
F +GD++HPQ K I+E EKL KM+ GY P+T + L D+E+E++E+ + HSE+LA+
Sbjct: 671 VFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 730
Query: 531 VYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKD 590
+GLI T+PG IRI+KNLRVC DCHT KL+S+I R IVVRD NRFH FK+G C+C D
Sbjct: 731 AFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD 790
Query: 591 YW 592
YW
Sbjct: 791 YW 792
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 163/373 (43%), Gaps = 47/373 (12%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRI 109
P + +N ++ F+ +P ++S+F LR+ + L P+ T +F + A + D GR+
Sbjct: 81 PDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRV 140
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
IH G S L+L + ++ +Y W
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMY--------------------FKFWR----------- 169
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREG-SRPNEVTVVAVLV 228
V AR +FD MP ++ W ++ISG K M E+++VF ++ E +R + T++ +L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
A A+L +L G IH A G + YV I +Y KCG ++ G +F R+ +V+
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
+++MI G+ + ++ SG + T + ++ H+ L+ + ++
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY--CLK 347
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI---ANMSVPPNGVVWGALLGGCRLHKNI 405
++ V L + S+ +E AR++ S+P W A++ G +
Sbjct: 348 SNFLSHASVS--TALTTVYSKLNEIESARKLFDESPEKSLPS----WNAMISG---YTQN 398
Query: 406 KLAEEAMRHLSEL 418
L E+A+ E+
Sbjct: 399 GLTEDAISLFREM 411
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 152/372 (40%), Gaps = 42/372 (11%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILP-DHFTCSFLLKACTISSDIVTGRIIHA 112
+ WN+ + + + ++I +F L S D T +L A ++ G IH+
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
K G S+ + + LY+ CG+ +F + + D+ +N MI
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI----------- 294
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
G G +E +L +F E+ G+R T+V+++
Sbjct: 295 --------------------HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS-- 332
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
G L +IH + + FL + V AL +Y K +E ++FD E+++ SW++M
Sbjct: 333 -GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G+ + M +S PN VT +L AC+ +G + G+ ++R
Sbjct: 392 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST-D 450
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ L+ + ++ G + EAR + ++ N V W ++ G LH +EA+
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLF-DLMTKKNEVTWNTMISGYGLHGQ---GQEAL 506
Query: 413 RHLSELDPLNDG 424
E+ LN G
Sbjct: 507 NIFYEM--LNSG 516
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 130/306 (42%), Gaps = 22/306 (7%)
Query: 123 LILQNMLLHLYASCGETSH-----ARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLF 177
LI +N L + SH A+++ + D++ + L G + ARD+F
Sbjct: 17 LISKNTYLDFFKRSTSISHLAQTHAQIILHGF-RNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 178 DSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVACAQLGDL 236
S+ R +V + ++ G + +L VF+ + + +PN T + A + D
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDD 135
Query: 237 EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGF 296
G+ IH A +G + + + ++ MY K +E+ +VFD M E+ + W++MI G+
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 297 AMHXXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR------ 349
+ +I S + + T + +L A + + + G + ++ +
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
DY ++ G + L S+ G+++ + P+ V + A++ G + +L+
Sbjct: 256 DY-VLTG------FISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGETELSL 307
Query: 410 EAMRHL 415
+ L
Sbjct: 308 SLFKEL 313
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 316/541 (58%), Gaps = 31/541 (5%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++V W + + G + I LF ++ ++ + PD + +L AC D+ +G I
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
Y++++ Q N ++ L++LYA CG KM +
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCG----------KMEK-------------------- 265
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
AR +FDSM +++ +W+++I G A +E + +F +M +E +P++ ++V L +CA
Sbjct: 266 -ARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
LG L+ G+ + + FL N+++ NALIDMY KCG + G VF M+E+ +V ++
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
I G A + + G+ P+ TF+G+L C H GL+ G FF + Y
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
+ VEHYGC+VDL RAG L++A +I +M + PN +VWGALL GCRL K+ +LAE
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
++ L L+P N G YV +SN+Y+ G+W+E + +R M +G+KK PG S I ++G VHE
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHE 564
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALV 531
F+A D++HP + I+ E L +M++ G++P T V D+E+E+KE L HSEKLA+
Sbjct: 565 FLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVA 624
Query: 532 YGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDY 591
GLI+T G IR++KNLRVC DCH +KL+S+I REIVVRD NRFHCF NG+C+C DY
Sbjct: 625 LGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDY 684
Query: 592 W 592
W
Sbjct: 685 W 685
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 189/415 (45%), Gaps = 43/415 (10%)
Query: 20 HATSQNHHLKQARAL--------LIKTNAPLSHVDLAHV--PAIVPWNSCLKFFAERGAP 69
H + NHHL L L S++ +H P I +NS + F
Sbjct: 33 HVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLF 92
Query: 70 CDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNML 129
+T+ LFL +R+ + FT +LKACT +S G +H+ V K GF ++ L
Sbjct: 93 HETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSL 152
Query: 130 LHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWT 189
L +Y+ +G + A LFD +P R+V +WT
Sbjct: 153 LSIYSG-------------------------------SGRLNDAHKLFDEIPDRSVVTWT 181
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
++ SG G EA+ +F +M G +P+ +V VL AC +GDL+ G+ I ++ E
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241
Query: 250 GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 309
+N +V L+++Y KCG +E+ VFD M E+ +V+WS+MI G+A +
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 310 XXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSR 369
M++ +KP+ + +G L +C+ +G +D G +++ R + + + L+D+ ++
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAK 360
Query: 370 AGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDG 424
G + EV M + V+ A + G + ++KL+ +L DG
Sbjct: 361 CGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/542 (38%), Positives = 317/542 (58%), Gaps = 32/542 (5%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++V + S + +A G + + LF + + I PD +T + +L C + G+ +H
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
++++ ++ + N L+ +YA CG A L+F +M +D+
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDII---------------- 464
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM-EREGSRPNEVTVVAVLVAC 230
SW ++I G +K + EAL +F+ + E + P+E TV VL AC
Sbjct: 465 ---------------SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
A L + G+ IH + NG+ + +V N+L+DMY KCG L +FD + + +VSW+
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT 569
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
MI G+ MH M ++G++ + ++F+ +L+ACSH GLVD+G FF IMR +
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
I P VEHY C+VD+L+R G L +A I NM +PP+ +WGALL GCR+H ++KLAE+
Sbjct: 630 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
+ EL+P N GYYV+M+N+YAEA KWE+V R+R+ + RG++K PGCS I I G V+
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLAL 530
FVAGD ++P+ + I K+ +M +GY P T L+D E+ +KE L HSEKLA+
Sbjct: 750 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAM 809
Query: 531 VYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKD 590
G+I++ G IR+ KNLRVC DCH K +S++ REIV+RD NRFH FK+G C+C+
Sbjct: 810 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 869
Query: 591 YW 592
+W
Sbjct: 870 FW 871
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 34/351 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ WNS + + G +S+F+++ I D T + C S I GR +H+
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
K F N LL +Y+ CG D+ +
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCG-------------------------------DLDS 349
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A+ +F M R+V S+TS+I+G A+ G++ EA+++F EME EG P+ TV AVL CA+
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L+ GK +H + + N +++V NAL+DMY KCG ++E VF MR + ++SW+++
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
I G++ + ++ P+ T VL AC+ + DKGRE + R+
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN- 528
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
G LVD+ ++ G L A + +++ + V W ++ G +H
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMH 578
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 157/354 (44%), Gaps = 35/354 (9%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D + + WN + A+ G +I LF ++ + D +T S + K+ + +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
G +H ++ K GF + N L+ Y +
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFY-------------------------------L 241
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
V +AR +FD M R+V SW S+I+G G++E+ L VF +M G + T+V+
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
V CA + G+++H F R CN L+DMY KCG L+ VF M +R+
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
VVS++SMI G+A M G+ P+ T VL+ C+ L+D+G+
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 346 -IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
I D G V + L+D+ ++ G ++EA V + M V + + W ++GG
Sbjct: 422 WIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRV-KDIISWNTIIGG 472
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 161/372 (43%), Gaps = 46/372 (12%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++ N+ L+ F E G + + L + I P CS +L+ C S + G+ +
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTL-CS-VLQLCADSKSLKDGKEVD 117
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+++ GF + L + L +Y +CG+ A +FD +V
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD---------------------EVK 156
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+ LF W +++ LAK G ++ +F +M G + T V + +
Sbjct: 157 IEKALF----------WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFS 206
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
L + G+ +H F +GF V N+L+ Y+K ++ +VFD M ER V+SW+S
Sbjct: 207 SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNS 266
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
+I G+ + M+ SG++ + T + V C+ L+ GR +I
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI----- 321
Query: 352 GIVP--GVEHYGC--LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
G+ E C L+D+ S+ G L+ A+ V MS + V + +++ G + L
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAG---YAREGL 377
Query: 408 AEEAMRHLSELD 419
A EA++ E++
Sbjct: 378 AGEAVKLFEEME 389
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 42/257 (16%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLF-LRLRQLSILPDHFTCSFLLKACTISSDIVTGR 108
V I+ WN+ + +++ + +SLF L L + PD T + +L AC S GR
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
IH Y+ + G+ S+ + N L+ +YA CG A ++FD + +D+ +W +M
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM-------- 571
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
I+G G +EA+ +F++M + G +E++ V++L
Sbjct: 572 -----------------------IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLY 608
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNV---YVCNALIDMYVKCGCLEEGCRVFDGM---R 282
AC+ G ++ G + Y C ++DM + G L + R + M
Sbjct: 609 ACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC--IVDMLARTGDLIKAYRFIENMPIPP 666
Query: 283 ERTVVSWSSMIVGFAMH 299
+ T+ W +++ G +H
Sbjct: 667 DATI--WGALLCGCRIH 681
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/614 (36%), Positives = 335/614 (54%), Gaps = 73/614 (11%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P I PWN+ ++ ++ D + ++ ++ + PD FT LLKAC+ S + GR +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 111 HAYVQKLGFQSNLILQNMLLHLY---------------------------------ASCG 137
HA V +LGF +++ +QN L+ LY A G
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 138 ETSHARLMFDKMPQQDVA-TWNIMI--------------GHLISA--------------- 167
E A +F +M + DV W ++ G I A
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 168 ---------GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRP 218
G V A+ LFD M N+ W ++ISG AK G + EA+ +F EM + RP
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 219 NEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVF 278
+ +++ + + ACAQ+G LE +S++ + + + +V++ +ALIDM+ KCG +E VF
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 279 DGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
D +R VV WS+MIVG+ +H M R G+ PN VTF+G+L AC+H G+V
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 339 KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+G FF M D+ I P +HY C++DLL RAG L++A EVI M V P VWGALL
Sbjct: 442 EGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 399 CRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTP 458
C+ H++++L E A + L +DP N G+YV +SN+YA A W+ V+ +R MK +G+ K
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 459 GCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKE 518
GCS + + G + F GD++HP+ + I E + ++K G++ + L D+ DE+ E
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 620
Query: 519 IFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRF 578
L HSE++A+ YGLI+T G P+RI KNLR C +CH A KL+S++ +REIVVRD NRF
Sbjct: 621 ETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRF 680
Query: 579 HCFKNGACTCKDYW 592
H FK+G C+C DYW
Sbjct: 681 HHFKDGVCSCGDYW 694
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
S GD+ AR +FD +PR + W ++I G ++ ++AL ++S M+ P+ T
Sbjct: 65 SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG--MRE 283
+L AC+ L L+ G+ +H GF +V+V N LI +Y KC L VF+G + E
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 284 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREF 343
RT+VSW++++ +A + M + +KP+ V + VL+A + + + +GR
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 344 F-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
++++ I P + L + ++ G++ A+ + M PN ++W A++ G
Sbjct: 245 HASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISG 297
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/510 (41%), Positives = 303/510 (59%), Gaps = 3/510 (0%)
Query: 86 PDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLM 145
PD F S L+KAC I GR +H + + ++ ++++ L+ +YA CG + A+ +
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 146 FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL 205
FD + ++ +W M+ +G A +LF +P +N+ SWT++ISG + G EA
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 206 RVFSEMEREGSRPNEVTVVAVLV-ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
VF+EM RE + V++ +V ACA L G+ +H GF V++ NALIDM
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 282
Query: 265 YVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
Y KC + +F MR R VVSW+S+IVG A H M+ G+KPN VTF
Sbjct: 283 YAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTF 342
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 384
+G+++ACSHVG V+KGRE F M +DYGI P ++HY CL+DLL R+G L+EA +I M
Sbjct: 343 VGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402
Query: 385 VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLND-GYYVVMSNVYAEAGKWEEVS 443
PP+ W ALL C+ ++ HL L D Y+++SN+YA A W +VS
Sbjct: 403 FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVS 462
Query: 444 RIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK-GYI 502
RR + V+K PG SS+ + F AG+ +HP + IF + +KL +M+++ GY+
Sbjct: 463 EARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYV 522
Query: 503 PDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLV 562
PDTS +L DM++++KE L+ HSE+ A+ YGL+ PG PIRI+KNLRVC DCH LK +
Sbjct: 523 PDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHI 582
Query: 563 SEIENREIVVRDRNRFHCFKNGACTCKDYW 592
SEI REI+VRD R+H FK G C+C D+W
Sbjct: 583 SEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 32/204 (15%)
Query: 95 LKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDV 154
L+ C + + T + +HA++ KLG L N L+++Y CG SHA +FD+MP +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRD- 68
Query: 155 ATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMERE 214
H+ +W SV++ L + +S + L VFS +
Sbjct: 69 --------HI----------------------AWASVLTALNQANLSGKTLSVFSSVGSS 98
Query: 215 GS-RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
RP++ A++ ACA LG ++ G+ +H + + + V ++L+DMY KCG L
Sbjct: 99 SGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS 158
Query: 274 GCRVFDGMRERTVVSWSSMIVGFA 297
VFD +R + +SW++M+ G+A
Sbjct: 159 AKAVFDSIRVKNTISWTAMVSGYA 182
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 37/229 (16%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSI-LPDHFTCSFLLKACTISSDIVTGR 108
V + W + + F + G + S+F +R+ + + D S ++ AC + + GR
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
+H V LGF S + + N L+ +YA C + A+ +F +M +DV +W
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSW----------- 307
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
TS+I G+A+ G +E+AL ++ +M G +PNEVT V ++
Sbjct: 308 --------------------TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 347
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLR---NVYVCNALIDMYVKCGCLEEG 274
AC+ +G +E G+ + + + +R Y C L+D+ + G L+E
Sbjct: 348 ACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC--LLDLLGRSGLLDEA 394
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/549 (39%), Positives = 312/549 (56%), Gaps = 33/549 (6%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D +V ++ WNS +K + P ISLF +R I PD T L + DI
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 106 TGRIIHAYVQKLG-FQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
R + + + G F ++ + N ++ +YA G
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL-------------------------- 399
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTV 223
V +AR +F+ +P +V SW ++ISG A+ G + EA+ +++ ME EG N+ T
Sbjct: 400 -----VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 224 VAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE 283
V+VL AC+Q G L G +H NG +V+V +L DMY KCG LE+ +F +
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 284 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREF 343
V W+++I H M+ G+KP+H+TF+ +L ACSH GLVD+G+
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 344 FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK 403
F +M+ DYGI P ++HYGC+VD+ RAG+LE A + I +MS+ P+ +WGALL CR+H
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
Query: 404 NIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
N+ L + A HL E++P + GY+V++SN+YA AGKWE V IR +G++KTPG SS+
Sbjct: 635 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
Query: 464 TIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYR 523
+D V F G++THP + ++ L K+KM GY+PD VL D+ED++KE L
Sbjct: 695 EVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMS 754
Query: 524 HSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKN 583
HSE+LA+ + LI T IRI KNLRVC DCH+ K +S+I REI+VRD NRFH FKN
Sbjct: 755 HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 814
Query: 584 GACTCKDYW 592
G C+C DYW
Sbjct: 815 GVCSCGDYW 823
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 182/423 (43%), Gaps = 56/423 (13%)
Query: 39 NAPLSHVDLAHVPA--IVPWNSCLKFFAERGAPCDTISLF-LRLRQLSILPDHFTCSFLL 95
N L+ H+ + WN + + G + I F L + + PD+ T +L
Sbjct: 101 NVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL 160
Query: 96 KACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVA 155
KAC ++ G IH K GF ++ + L+HLY+
Sbjct: 161 KACRT---VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA----------------- 200
Query: 156 TWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREG 215
VG AR LFD MP R++ SW ++ISG + G ++EAL + + +
Sbjct: 201 --------------VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD 246
Query: 216 SRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGC 275
S VTVV++L AC + GD G +IH ++ +G ++V N LID+Y + G L +
Sbjct: 247 S----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 276 RVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG 335
+VFD M R ++SW+S+I + ++ M S ++P+ +T I + S +G
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 336 LVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGAL 395
+ R R + + +V + ++ G ++ AR V N + + W +
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF-NWLPNTDVISWNTI 421
Query: 396 LGGCRLHKNIKLAEEAMRHLSELD-----PLNDGYYVVMSNVYAEAGKWEEVSRIRRSMK 450
+ G + A EA+ + ++ N G +V + ++AG +R+ MK
Sbjct: 422 ISG---YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA------LRQGMK 472
Query: 451 SRG 453
G
Sbjct: 473 LHG 475
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 179/397 (45%), Gaps = 41/397 (10%)
Query: 141 HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGM 200
HARL+ K Q +V ++ G+V AR FD + R+V +W +ISG + G
Sbjct: 74 HARLVVSKQIQ-NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 201 SEEALRVFS-EMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCN 259
S E +R FS M G P+ T +VL AC + D G IH A GF+ +VYV
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAA 189
Query: 260 ALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
+LI +Y + + +FD M R + SW++MI G+ + +G++
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ-----SGNAKEALTLSNGLRA 244
Query: 320 -NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEH----YGCLVDLLSRAGRLE 374
+ VT + +L AC+ G ++G + Y I G+E L+DL + GRL
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRG-----VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 375 EAREVIANMSVPPNGVVWGALLGGCRLHKN----IKLAEEAMRHLSELDPLNDGYYVVMS 430
+ ++V M V + + W +++ L++ I L +E MR LS + P + + ++
Sbjct: 300 DCQKVFDRMYV-RDLISWNSIIKAYELNEQPLRAISLFQE-MR-LSRIQP-DCLTLISLA 355
Query: 431 NVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM-- 488
++ ++ G R RS++ ++K ITI V A A+ +F
Sbjct: 356 SILSQLGD----IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 489 ------WEKLLVKMKMKGYIPDTSVVLLDMEDEQKEI 519
W ++ G+ + ++ + ++ +E+ EI
Sbjct: 412 NTDVISWNTIISGYAQNGFASE-AIEMYNIMEEEGEI 447
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 22/297 (7%)
Query: 179 SMPR--------RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
S+PR R R S+ S + + S AL+ + + G+ E+ V L
Sbjct: 7 SLPRQIPTCKGGRFTRVLQSIGSVIREFSASANALQ---DCWKNGNESKEIDDVHTLFRY 63
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+L+ K +H + ++NV + L+++Y G + FD ++ R V +W+
Sbjct: 64 CT--NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWN 121
Query: 291 SMIVGFAMHXXXXXXXX-XXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
MI G+ M+ SG+ P++ TF VL AC V +D + +
Sbjct: 122 LMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV--IDGNK--IHCLAL 177
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
+G + V L+ L SR + AR + M V G W A++ G N A+
Sbjct: 178 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG-SWNAMISGYCQSGN---AK 233
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITID 466
EA+ + L ++ V + + EAG + I G++ S+ ID
Sbjct: 234 EALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/547 (39%), Positives = 319/547 (58%), Gaps = 36/547 (6%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRL------RQLSILPDHFTCSFLLKACTISSDIVT 106
IV W S ++ + G D +SLF L ++ D ++ AC+
Sbjct: 142 IVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGL 201
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
IH++V K GF + + N LL YA GE
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE---------------------------- 233
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRP-NEVTVVA 225
G V AR +FD + ++ S+ S++S A+ GMS EA VF + + N +T+
Sbjct: 234 -GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
VL+A + G L GK IH G +V V ++IDMY KCG +E + FD M+ +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
V SW++MI G+ MH MI SG++PN++TF+ VL ACSH GL +G +F
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 412
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
M+ +G+ PG+EHYGC+VDLL RAG L++A ++I M + P+ ++W +LL CR+HKN+
Sbjct: 413 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 472
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
+LAE ++ L ELD N GYY+++S++YA+AG+W++V R+R MK+RG+ K PG S + +
Sbjct: 473 ELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 532
Query: 466 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHS 525
+G VH F+ GDE HPQ + I+E +L K+ GY+ +TS V D+++E+KE+ L HS
Sbjct: 533 NGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHS 592
Query: 526 EKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGA 585
EKLA+ +G++NT PG + ++KNLRVC DCH +KL+S+I +RE VVRD RFH FK+G
Sbjct: 593 EKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGG 652
Query: 586 CTCKDYW 592
C+C DYW
Sbjct: 653 CSCGDYW 659
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 46/369 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ WNS + A G + + F +R+LS+ P + +KAC+ DI +G+ H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
G+QS++ + + L+ +Y++CG+ AR
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDAR----------------------------- 131
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM------EREGSRPNEVTVVAV 226
+FD +P+RN+ SWTS+I G G + +A+ +F ++ + + + + +V+V
Sbjct: 132 --KVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSV 189
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGC----RVFDGMR 282
+ AC+++ +SIH F GF R V V N L+D Y K G E G ++FD +
Sbjct: 190 ISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG--EGGVAVARKIFDQIV 247
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP-NHVTFIGVLHACSHVGLVDKGR 341
++ VS++S++ +A ++++ + N +T VL A SH G + G+
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 342 EFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRL 401
+ R G+ V ++D+ + GR+E AR+ M N W A++ G +
Sbjct: 308 CIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGM 365
Query: 402 HKNIKLAEE 410
H + A E
Sbjct: 366 HGHAAKALE 374
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 13/201 (6%)
Query: 180 MPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFG 239
+ + +V SW SVI+ LA+ G S EAL FS M + P + + AC+ L D+ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 240 KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMH 299
K H+ A G+ +++V +ALI MY CG LE+ +VFD + +R +VSW+SMI G+ ++
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 300 XXXXXXXXXXXXMI------RSGMKPNHVTFIGVLHACSHV---GLVDKGREFFTIMRRD 350
++ M + + + V+ ACS V GL + F +++R
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF--VIKR- 212
Query: 351 YGIVPGVEHYGCLVDLLSRAG 371
G GV L+D ++ G
Sbjct: 213 -GFDRGVSVGNTLLDAYAKGG 232
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 309/540 (57%), Gaps = 31/540 (5%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V +N+ + +A+ G D + + + + PD FT S +L + D++ G+ IH
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
YV + G S++ + + L+ +YA + +F ++ +D +WN
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN-------------- 312
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
S+++G + G EALR+F +M +P V +V+ ACA
Sbjct: 313 -----------------SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L L GK +H + GF N+++ +AL+DMY KCG ++ ++FD M VSW+++
Sbjct: 356 LATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAI 415
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I+G A+H M R G+KPN V F+ VL ACSHVGLVD+ +F M + YG
Sbjct: 416 IMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYG 475
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ +EHY + DLL RAG+LEEA I+ M V P G VW LL C +HKN++LAE+
Sbjct: 476 LNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVA 535
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
+ +D N G YV+M N+YA G+W+E++++R M+ +G++K P CS I + H F
Sbjct: 536 EKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGF 595
Query: 473 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVY 532
V+GD +HP I E + ++ +M+ +GY+ DTS VL D+++E K L+ HSE+LA+ +
Sbjct: 596 VSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAF 655
Query: 533 GLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
G+INT+PG IR+ KN+R+C DCH A+K +S+I REI+VRD +RFH F G C+C DYW
Sbjct: 656 GIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 191/373 (51%), Gaps = 11/373 (2%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P ++ W S ++ F ++ ++ F+ +R PDH +LK+CT+ D+ G +
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASC---GETSHARLMFDKMPQQ--DVATWNIMIGHLI 165
H ++ +LG +L N L+++YA G +FD+MPQ+ + ++ I
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
+ + R +F+ MPR++V S+ ++I+G A+ GM E+ALR+ EM +P+ T+ +
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
VL ++ D+ GK IH + G +VY+ ++L+DMY K +E+ RVF + R
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
+SW+S++ G+ + M+ + +KP V F V+ AC+H+ + G++
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRL---- 401
+ R G + LVD+ S+ G ++ AR++ M+V + V W A++ G L
Sbjct: 368 YVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHG 425
Query: 402 HKNIKLAEEAMRH 414
H+ + L EE R
Sbjct: 426 HEAVSLFEEMKRQ 438
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/540 (39%), Positives = 302/540 (55%), Gaps = 32/540 (5%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WNS + + + P + + +F ++ + P + L AC D+ GR IH
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+LG N+ + N L+ +Y C E A MF K+
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS--------------------- 400
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
R + SW ++I G A+ G +AL FS+M +P+ T V+V+ A A+
Sbjct: 401 ----------RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L K IH + +NV+V AL+DMY KCG + +FD M ER V +W++M
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G+ H M + +KPN VTF+ V+ ACSH GLV+ G + F +M+ +Y
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
I ++HYG +VDLL RAGRL EA + I M V P V+GA+LG C++HKN+ AE+A
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
L EL+P + GY+V+++N+Y A WE+V ++R SM +G++KTPGCS + I VH F
Sbjct: 631 ERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSF 690
Query: 473 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVY 532
+G HP +K I+ EKL+ +K GY+PDT++V L +E++ KE L HSEKLA+ +
Sbjct: 691 FSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISF 749
Query: 533 GLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
GL+NT G I + KNLRVC DCH A K +S + REIVVRD RFH FKNGAC+C DYW
Sbjct: 750 GLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 169/345 (48%), Gaps = 33/345 (9%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V +++ LK FA+ + F+R+R + P + ++LLK C +++ G+ IH
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ K GF +L L ++YA C + V A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQ-------------------------------VNEA 189
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
R +FD MP R++ SW ++++G ++ GM+ AL + M E +P+ +T+V+VL A + L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
+ GK IH +A +GF V + AL+DMY KCG LE ++FDGM ER VVSW+SMI
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
+ + M+ G+KP V+ +G LHAC+ +G +++GR F + + G+
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGL 368
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
V L+ + + ++ A + + V W A++ G
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQ-SRTLVSWNAMILG 412
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 169/365 (46%), Gaps = 33/365 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN+ + +++ G + + + + ++ P T +L A + I G+ IH
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y + GF S + + L+ +YA CG +
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGS-------------------------------LET 289
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
AR LFD M RNV SW S+I + +EA+ +F +M EG +P +V+V+ L ACA
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
LGDLE G+ IH+ + G RNV V N+LI MY KC ++ +F ++ RT+VSW++M
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I+GFA + M +KP+ T++ V+ A + + + + ++ R
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS-C 468
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ V LVD+ ++ G + AR +I +M + W A++ G H K A E
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELF 527
Query: 413 RHLSE 417
+ +
Sbjct: 528 EEMQK 532
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 2/241 (0%)
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
G V A +F+ + + + +++ G AK ++AL+ F M + P +L
Sbjct: 83 GSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL 142
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
C +L GK IH +GF +++ L +MY KC + E +VFD M ER +V
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV 202
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
SW++++ G++ + M +KP+ +T + VL A S + L+ G+E
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
R G V LVD+ ++ G LE AR++ M + N V W +++ ++N K
Sbjct: 263 MRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKE 320
Query: 408 A 408
A
Sbjct: 321 A 321
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/533 (38%), Positives = 306/533 (57%), Gaps = 32/533 (6%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
V W + + +++ PCD + F ++ + P+ FT S ++KA G +H
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K GF SN+ + + LL LY G A+L
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL---------------------------- 217
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
+FD++ RN SW ++I+G A+ +E+AL +F M R+G RP+ + ++ AC+
Sbjct: 218 ---VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
G LE GK +H + +G + N L+DMY K G + + ++FD + +R VVSW+S+
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
+ +A H M R G++PN ++F+ VL ACSH GL+D+G ++ +M++D G
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-G 393
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
IVP HY +VDLL RAG L A I M + P +W ALL CR+HKN +L A
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
H+ ELDP + G +V++ N+YA G+W + +R+R+ MK GVKK P CS + I+ +H F
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 513
Query: 473 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVY 532
VA DE HPQ + I WE++L K+K GY+PDTS V++ ++ +++E+ L HSEK+AL +
Sbjct: 514 VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAF 573
Query: 533 GLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGA 585
L+NT PG I I KN+RVC DCHTA+KL S++ REI+VRD NRFH FK+ +
Sbjct: 574 ALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 318/543 (58%), Gaps = 32/543 (5%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +N+ ++ + + + + + + Q PD+FT LLKACT I G+ I
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQI 154
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H V KLG ++++ +QN L+++Y CGE + +F+K+ + A
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA--------------- 199
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVA 229
SW+S++S A GM E L +F M E + + E +V+ L+A
Sbjct: 200 ----------------SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLA 243
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
CA G L G SIH F N N+ V +L+DMYVKCGCL++ +F M +R +++
Sbjct: 244 CANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTY 303
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
S+MI G A+H MI+ G++P+HV ++ VL+ACSH GLV +GR F M +
Sbjct: 304 SAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLK 363
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
+ + P EHYGCLVDLL RAG LEEA E I ++ + N V+W L CR+ +NI+L +
Sbjct: 364 EGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQ 423
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
A + L +L N G Y+++SN+Y++ W++V+R R + +G+K+TPG S + + G
Sbjct: 424 IAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKT 483
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLA 529
H FV+ D +HP+ K I++M ++ ++K +GY PD + +LL++++E+K+ L HS+K+A
Sbjct: 484 HRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVA 543
Query: 530 LVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCK 589
+ +GL+ T PG I+I +NLR+C DCHT K +S I REIVVRDRNRFH FK G C+CK
Sbjct: 544 IAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCK 603
Query: 590 DYW 592
DYW
Sbjct: 604 DYW 606
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/618 (37%), Positives = 336/618 (54%), Gaps = 88/618 (14%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
A PWN L+ A + ++ISL+ + + PD F+ F+LK+C S V+G+ +H
Sbjct: 17 ASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLH 76
Query: 112 AYVQKLG---------------------------FQSN------LILQNMLLHLYASCGE 138
+V K G F+ N + N L+ Y + +
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 139 TSHARLMFDKMPQ---------------------------------------QDVATWNI 159
+ A MF +M + +VA N
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 160 MIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPN 219
I + G V A R LFD MP + + +W +VISG ++ G++ + L ++ +M+ G P+
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPD 256
Query: 220 EVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFD 279
T+V+VL +CA LG + G + + E NGF+ NV+V NA I MY +CG L + VFD
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 280 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDK 339
M +++VSW++MI + MH MI+ G++P+ F+ VL ACSH GL DK
Sbjct: 317 IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 340 GREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
G E F M+R+Y + PG EHY CLVDLL RAGRL+EA E I +M V P+G VWGALLG C
Sbjct: 377 GLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGAC 436
Query: 400 RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPG 459
++HKN+ +AE A + E +P N GYYV+MSN+Y+++ E + RIR M+ R +K PG
Sbjct: 437 KIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 496
Query: 460 CSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL--DME-DEQ 516
S + G VH F+AGD +H Q + + M ++L +TSV+ L +M+ D
Sbjct: 497 YSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL-----------ETSVMELAGNMDCDRG 545
Query: 517 KEI--FLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRD 574
+E+ HSE+LA+ +G++N+ PG I ++KNLRVCEDCH LK VS+I +R+ VVRD
Sbjct: 546 EEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRD 605
Query: 575 RNRFHCFKNGACTCKDYW 592
+RFH FK+G C+CKDYW
Sbjct: 606 ASRFHYFKDGVCSCKDYW 623
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 8/175 (4%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D V ++ WN+ + +++ G D + L+ +++ + PD FT +L +C
Sbjct: 215 DEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKK 274
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIG--H 163
G + V+ GF N+ + N + +YA CG + AR +FD MP + + +W MIG
Sbjct: 275 IGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG 334
Query: 164 LISAGDVGAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEMERE 214
+ G++G LFD M +R +R + V+S + G++++ L +F M+RE
Sbjct: 335 MHGMGEIGLM--LFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/562 (37%), Positives = 331/562 (58%), Gaps = 18/562 (3%)
Query: 41 PLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTI 100
PLS D V W + L F+ G +++ LF+ +R+ + D + L C
Sbjct: 70 PLSEKD------NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAK 123
Query: 101 SSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIM 160
D+ + H K+G +++ + N L+ +Y CG S + +F+++ ++ V +W ++
Sbjct: 124 LEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVV 183
Query: 161 IGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME-REGSRPN 219
+ ++ + R++F MP RN +WT +++G G + E L + +EM R G N
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLN 243
Query: 220 EVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFL-------RNVYVCNALIDMYVKCGCLE 272
VT+ ++L ACAQ G+L G+ +H +A + +V V AL+DMY KCG ++
Sbjct: 244 FVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNID 303
Query: 273 EGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
VF MR+R VV+W+++ G AMH MIR +KP+ +TF VL ACS
Sbjct: 304 SSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACS 362
Query: 333 HVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVW 392
H G+VD+G F +R YG+ P V+HY C+VDLL RAG +EEA ++ M VPPN VV
Sbjct: 363 HSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVL 421
Query: 393 GALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
G+LLG C +H +++AE R L ++ P N Y ++MSN+Y G+ + +R S++ R
Sbjct: 422 GSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKR 481
Query: 453 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDM 512
G++K PG SSI ++ VH F +GD +HP+ K I+ +++ +++ GY+PD S ++
Sbjct: 482 GIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHS 541
Query: 513 ED--EQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREI 570
E E+KE L HSEKLA+ +GL+ TKP P+ + KNLR+C DCH+A+K+VS++ +REI
Sbjct: 542 EGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREI 601
Query: 571 VVRDRNRFHCFKNGACTCKDYW 592
++RDRNRFH FK G+C+C DYW
Sbjct: 602 IIRDRNRFHQFKGGSCSCSDYW 623
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 155/379 (40%), Gaps = 71/379 (18%)
Query: 93 FLLKACTISSDIVTGRIIHAYVQKLGFQS--NLILQNMLLHLYASCGETSHARLMFDKMP 150
LL+ C S + G+ +HA + G + L N L YAS GE A+ +FD++P
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 151 QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSE 210
+ +D D WT+++S ++ G+ ++++F E
Sbjct: 71 LSE--------------------KDNVD---------WTTLLSSFSRYGLLVNSMKLFVE 101
Query: 211 MEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGC 270
M R+ ++V+VV + CA+L DL F + H A G L +V VCNAL+DMY KCG
Sbjct: 102 MRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGL 161
Query: 271 -------------------------------LEEGCRVFDGMRERTVVSWSSMIVGFAMH 299
LE G VF M ER V+W+ M+ G+
Sbjct: 162 VSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGA 221
Query: 300 XXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVE 358
M+ R G N VT +L AC+ G + GR + ++
Sbjct: 222 GFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEA 281
Query: 359 HYG------CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
Y LVD+ ++ G ++ + V M N V W AL G +H ++ +
Sbjct: 282 SYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMF 340
Query: 413 -RHLSELDPLNDGYYVVMS 430
+ + E+ P + + V+S
Sbjct: 341 PQMIREVKPDDLTFTAVLS 359
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/550 (37%), Positives = 321/550 (58%), Gaps = 44/550 (8%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLS-ILPDHFTCSFLLKACTISSDIVTGRIIHAYV 114
WN+ + +++ + + LF+ + + + +L + T + ++ AC S IH +V
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 115 QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAAR 174
K G + +QN L+ +Y+ G+ A +F KM +D+
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV------------------- 472
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME-----------REGSRPNEVTV 223
+W ++I+G E+AL + +M+ R +PN +T+
Sbjct: 473 ------------TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 224 VAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE 283
+ +L +CA L L GK IH +A N +V V +AL+DMY KCGCL+ +VFD + +
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580
Query: 284 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREF 343
+ V++W+ +I+ + MH M+ G+KPN VTFI V ACSH G+VD+G
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Query: 344 FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGV-VWGALLGGCRLH 402
F +M+ DYG+ P +HY C+VDLL RAGR++EA +++ M N W +LLG R+H
Sbjct: 641 FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIH 700
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSS 462
N+++ E A ++L +L+P +YV+++N+Y+ AG W++ + +RR+MK +GV+K PGCS
Sbjct: 701 NNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSW 760
Query: 463 ITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLY 522
I VH+FVAGD +HPQ++ + E L +M+ +GY+PDTS VL ++E+++KEI L
Sbjct: 761 IEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLC 820
Query: 523 RHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFK 582
HSEKLA+ +G++NT PG IR+ KNLRVC DCH A K +S+I +REI++RD RFH FK
Sbjct: 821 GHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFK 880
Query: 583 NGACTCKDYW 592
NG C+C DYW
Sbjct: 881 NGTCSCGDYW 890
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 165/376 (43%), Gaps = 46/376 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN+ L + + + + + PD FT S +L AC+ + TG+ +HA
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 113 YVQKLG-FQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
Y K G N + + L+ +Y +C + V
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQ-------------------------------VL 355
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMERE-GSRPNEVTVVAVLVAC 230
+ R +FD M R + W ++I+G ++ +EAL +F ME G N T+ V+ AC
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+ G ++IH F G R+ +V N L+DMY + G ++ R+F M +R +V+W+
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 291 SMIVGFA-----------MHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDK 339
+MI G+ +H R +KPN +T + +L +C+ + + K
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 340 GREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
G+E ++ + V LVD+ ++ G L+ +R+V + N + W ++
Sbjct: 536 GKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAY 593
Query: 400 RLHKNIKLAEEAMRHL 415
+H N + A + +R +
Sbjct: 594 GMHGNGQEAIDLLRMM 609
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 168/423 (39%), Gaps = 55/423 (13%)
Query: 2 LCLCSTLPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVP------ 55
L +LP P P+ L + H L++ + D+A + P
Sbjct: 5 LAFTFSLPSIFPFPSQLLPFSRHKH------PYLLRATPTSATEDVASAVSGAPSIFISQ 58
Query: 56 ------WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
W L+ + + ++ + L I PD++ LLKA D+ G+
Sbjct: 59 SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118
Query: 110 IHAYVQKLGFQ-SNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
IHA+V K G+ ++ + N L++LY CG
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCG------------------------------- 147
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
D GA +FD + RN SW S+IS L E AL F M E P+ T+V+V+
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 207
Query: 229 ACAQL---GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
AC+ L L GK +H + G L N ++ N L+ MY K G L + R
Sbjct: 208 ACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 266
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
+V+W++++ + M+ G++P+ T VL ACSH+ ++ G+E
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
++ + LVD+ ++ R V M G +W A++ G +++
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG-LWNAMIAGYSQNEHD 385
Query: 406 KLA 408
K A
Sbjct: 386 KEA 388
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 154/355 (43%), Gaps = 49/355 (13%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACT---ISSDIVTGRII 110
V WNS + + F + ++ P FT ++ AC+ + ++ G+ +
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
HAY + G ++ I+ N L+ +Y G+ + ++++ +D+ T
Sbjct: 225 HAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVT-------------- 269
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
W +V+S L + EAL EM EG P+E T+ +VL AC
Sbjct: 270 -----------------WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 231 AQLGDLEFGKSIHRFAEGNGFL-RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
+ L L GK +H +A NG L N +V +AL+DMY C + G RVFDGM +R + W
Sbjct: 313 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRS-GMKPNHVTFIGVLHACSHVGLVDKGREF--FTI 346
++MI G++ + M S G+ N T GV+ AC G + F +
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 347 MR---RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
R RD + L+D+ SR G+++ A + M + V W ++ G
Sbjct: 433 KRGLDRDRFV------QNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 17/259 (6%)
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
A V A +F S R + W ++ + + EA+ + +M G +P+ A+
Sbjct: 45 ASAVSGAPSIFISQSR-SPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGF-LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
L A A L D+E GK IH G+ + +V V N L+++Y KCG +VFD + ER
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDK---GRE 342
VSW+S+I M+ ++P+ T + V+ ACS++ + + G++
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ 223
Query: 343 FFTIMRRDYGIVPGVEH---YGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
YG+ G + LV + + G+L ++ ++ + + V W +L
Sbjct: 224 VHA-----YGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSS- 276
Query: 400 RLHKNIKLAEEAMRHLSEL 418
L +N +L EA+ +L E+
Sbjct: 277 -LCQNEQLL-EALEYLREM 293
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQL-----------SILPDHFTCSFLLKACTIS 101
+V WN+ + + D + L +++ L S+ P+ T +L +C
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 530
Query: 102 SDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMI 161
S + G+ IHAY K +++ + + L+ +YA CG +R +FD++PQ++V TWN++I
Sbjct: 531 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 590
Query: 162 GHLISAGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMERE-GS 216
G+ A DL M + V+ ++ SV + + GM +E LR+F M+ + G
Sbjct: 591 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 650
Query: 217 RPN 219
P+
Sbjct: 651 EPS 653
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 314/555 (56%), Gaps = 49/555 (8%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W++ + +A+RG + + + ++ I P+ T +L C ++ G+ IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 113 Y-------VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
Y ++K G ++ N L+ +YA C + AR MFD + ++
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE------------ 437
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREG--SRPNEVTV 223
R+V +WT +I G ++ G + +AL + SEM E +RPN T+
Sbjct: 438 -----------------RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 224 VAVLVACAQLGDLEFGKSIHRFAEGNGFLRN------VYVCNALIDMYVKCGCLEEGCRV 277
LVACA L L GK IH +A LRN ++V N LIDMY KCG + + V
Sbjct: 481 SCALVACASLAALRIGKQIHAYA-----LRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 278 FDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
FD M + V+W+S++ G+ MH M R G K + VT + VL+ACSH G++
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLG 397
D+G E+F M+ +G+ PG EHY CLVDLL RAGRL A +I M + P VVW A L
Sbjct: 596 DQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
Query: 398 GCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT 457
CR+H ++L E A ++EL +DG Y ++SN+YA AG+W++V+RIR M+ +GVKK
Sbjct: 656 CCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Query: 458 PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQK 517
PGCS + F GD+THP AK I+++ + ++K GY+P+T L D++DE+K
Sbjct: 716 PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEK 775
Query: 518 EIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNR 577
+ L+ HSEKLAL YG++ T G IRI KNLRVC DCHTA +S I + +I++RD +R
Sbjct: 776 DDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSR 835
Query: 578 FHCFKNGACTCKDYW 592
FH FKNG+C+CK YW
Sbjct: 836 FHHFKNGSCSCKGYW 850
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 182/389 (46%), Gaps = 20/389 (5%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDI 104
D V +V WNS ++ +A+ G P + +F R+ + PD+ T +L C
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 105 VTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
G+ +H + N+ + N L+ +YA CG A +F M +DV +WN M+
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 165 ISAGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNE 220
G A LF+ M ++ +W++ ISG A+ G+ EAL V +M G +PNE
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 221 VTVVAVLVACAQLGDLEFGKSIHRFA-------EGNGFLRNVYVCNALIDMYVKCGCLEE 273
VT+++VL CA +G L GK IH +A NG V N LIDMY KC ++
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 274 GCRVFDGM--RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG--MKPNHVTFIGVLH 329
+FD + +ER VV+W+ MI G++ H M +PN T L
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 330 ACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNG 389
AC+ + + G++ R+ + CL+D+ ++ G + +AR V NM + N
Sbjct: 486 ACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNE 544
Query: 390 VVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
V W +L+ G +H EEA+ E+
Sbjct: 545 VTWTSLMTGYGMH---GYGEEALGIFDEM 570
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 180/407 (44%), Gaps = 74/407 (18%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WNS ++ + + G + LF + LS PD++T F+ KAC S + G HA
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
GF SN+ + N L+ +Y+ C S AR +FD+M + W+++
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM-----SVWDVV--------------- 194
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMERE-GSRPNEVTVVAVLVACAQLG 234
SW S+I AK G + AL +FS M E G RP+ +T+V VL CA LG
Sbjct: 195 -----------SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM-- 292
GK +H FA + ++N++V N L+DMY KCG ++E VF M + VVSW++M
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 293 ---------------------------------IVGFAMHXXXXXXXXXXXXMIRSGMKP 319
I G+A M+ SG+KP
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 320 NHVTFIGVLHACSHVGLVDKGREF------FTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 373
N VT I VL C+ VG + G+E + I R G L+D+ ++ ++
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 374 EEAREVIANMSVPPNGVV-WGALLGGCRLHKNIKLAEEAMRHLSELD 419
+ AR + ++S VV W ++GG H + A E + + E D
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 27/348 (7%)
Query: 136 CGETSHARLMFDKMPQQDVATWNI---MIGHLISAGDVGAARDLFDSMPRRN--VRSWTS 190
C S +L+ K+ + T N+ +I IS G + A L P + V W S
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 191 VISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNG 250
+I G + + L +F M P+ T V AC ++ + G+S H + G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 251 FLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 310
F+ NV+V NAL+ MY +C L + +VFD M VVSW+S+I +A
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 311 XMIRS-GMKPNHVTFIGVLHACSHVGLVDKGREF--FTIMRRDYGIVPGVEHYGCLVDLL 367
M G +P+++T + VL C+ +G G++ F + ++ + CLVD+
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE---MIQNMFVGNCLVDMY 274
Query: 368 SRAGRLEEAREVIANMSVPPNGVVWGALLGGC----RLHKNIKLAEEAMRHLSELDPLND 423
++ G ++EA V +NMSV + V W A++ G R ++L E+ ++D +
Sbjct: 275 AKCGMMDEANTVFSNMSV-KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT- 332
Query: 424 GYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT--------PGCSSI 463
+ + YA+ G E + R M S G+K GC+S+
Sbjct: 333 --WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/651 (36%), Positives = 343/651 (52%), Gaps = 99/651 (15%)
Query: 4 LCSTLPPQIPKPTHLDHATSQNHH---------------LKQARALLIKTNAPLSHVDLA 48
L L P IP + +T+ NHH LKQ A ++T P L
Sbjct: 25 LVHPLSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLF 84
Query: 49 HVPAIVP-------------------------WNSCLKFFAERGAPCDTISLFLR--LRQ 81
I+ WN+ ++ A + + + R L +
Sbjct: 85 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 144
Query: 82 LSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSH 141
PD T F+LKAC G+ +H + K GF ++ + N L+HLY SCG
Sbjct: 145 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG---- 200
Query: 142 ARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMS 201
+ AR +FD MP R++ SW S+I L + G
Sbjct: 201 ---------------------------CLDLARKVFDEMPERSLVSWNSMIDALVRFGEY 233
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLR-------- 253
+ AL++F EM+R P+ T+ +VL ACA LG L G H F LR
Sbjct: 234 DSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAF-----LLRKCDVDVAM 287
Query: 254 NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 313
+V V N+LI+MY KCG L +VF GM++R + SW++MI+GFA H M+
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 314 --RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAG 371
R ++PN VTF+G+L AC+H G V+KGR++F +M RDY I P +EHYGC+VDL++RAG
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 372 RLEEAREVIANMSVPPNGVVWGALLGGC-RLHKNIKLAEEAMRHLSELDPLND------- 423
+ EA +++ +M + P+ V+W +LL C + +++L+EE R++ N+
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCS 467
Query: 424 GYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 483
G YV++S VYA A +W +V +R+ M G++K PGCSSI I+G+ HEF AGD +HPQ K
Sbjct: 468 GAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTK 527
Query: 484 GIFEMWEKLLVKMKMKGYIPDTSVV-LLD-MEDEQKEIFLYRHSEKLALVYGLINTKPGM 541
I++ + + +++ GY+PD S L+D D KE L HSE+LA+ +GLIN P
Sbjct: 528 QIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQT 587
Query: 542 PIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
PIRI KNLRVC DCH KL+S++ N EI+VRDR RFH FK+G+C+C DYW
Sbjct: 588 PIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 297/540 (55%), Gaps = 31/540 (5%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W + + + + ++ F ++ I D + + AC + G+ IHA
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
GF S+L QN L+ LY+ CG+ + L F++ D WN
Sbjct: 616 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN-------------- 661
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
+++SG + G +EEALRVF M REG N T + + A ++
Sbjct: 662 -----------------ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 704
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+++ GK +H G+ VCNALI MY KCG + + + F + + VSW+++
Sbjct: 705 TANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAI 764
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I ++ H MI S ++PNHVT +GVL ACSH+GLVDKG +F M +YG
Sbjct: 765 INAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ P EHY C+VD+L+RAG L A+E I M + P+ +VW LL C +HKN+++ E A
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA 884
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
HL EL+P + YV++SN+YA + KW+ R+ MK +GVKK PG S I + +H F
Sbjct: 885 HHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSF 944
Query: 473 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVY 532
GD+ HP A I E ++ L + GY+ D +L +++ EQK+ ++ HSEKLA+ +
Sbjct: 945 YVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISF 1004
Query: 533 GLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
GL++ +PI +MKNLRVC DCH +K VS++ NREI+VRD RFH F+ GAC+CKDYW
Sbjct: 1005 GLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 36/360 (10%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V +N+ + ++ G + LF R+ + PD T + L+ AC+ + G+ +HAY
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY 414
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
KLGF SN ++ LL+LYA C + A F + ++V WN+M+ A
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML----------VA 464
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
L D + RN + R+F +M+ E PN+ T ++L C +L
Sbjct: 465 YGLLDDL--RN-------------------SFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
GDLE G+ IH F N YVC+ LIDMY K G L+ + + VVSW++MI
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
G+ + M+ G++ + V + AC+ + + +G++ G
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GF 622
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
+ LV L SR G++EE+ N + W AL+ G + N EEA+R
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGN---NEEALR 678
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 159/346 (45%), Gaps = 39/346 (11%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
W + + ++ + I LF + L I+P + S +L AC + G +H V
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
KLGF S+ + N L+ LY +G+LISA
Sbjct: 316 KLGFSSDTYVCNALVSLY-------------------------FHLGNLISA------EH 344
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
+F +M +R+ ++ ++I+GL++CG E+A+ +F M +G P+ T+ +++VAC+ G
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
L G+ +H + GF N + AL+++Y KC +E F VV W+ M+V
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT-IMRRDYGIV 354
+ + M + PN T+ +L C +G ++ G + + I++ ++ +
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL- 523
Query: 355 PGVEHYGC--LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
Y C L+D+ ++ G+L+ A +++ + + V W ++ G
Sbjct: 524 ---NAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAG 565
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 162/367 (44%), Gaps = 38/367 (10%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKAC---TISSDIVTGR 108
I WN +K A R + LF+R+ ++ P+ T S +L+AC +++ D+V
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQ- 208
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
IHA + G + + ++ N L+ LY+ G
Sbjct: 209 -IHARILYQGLRDSTVVCNPLIDLYSR-------------------------------NG 236
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
V AR +FD + ++ SW ++ISGL+K EA+R+F +M G P +VL
Sbjct: 237 FVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
AC ++ LE G+ +H GF + YVCNAL+ +Y G L +F M +R V+
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 356
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
++++I G + M G++P+ T ++ ACS G + +G++
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
+ G + G L++L ++ +E A + V N V+W +L L +++ +
Sbjct: 417 K-LGFASNNKIEGALLNLYAKCADIETALDYFLETEV-ENVVLWNVMLVAYGLLDDLRNS 474
Query: 409 EEAMRHL 415
R +
Sbjct: 475 FRIFRQM 481
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 156/355 (43%), Gaps = 33/355 (9%)
Query: 48 AHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTG 107
V +V WN L + ++ +F +++ I+P+ +T +LK C D+ G
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 108 RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA 167
IH+ + K FQ N + ++L+ +YA G+ A W+I+I
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA--------------WDILI------ 549
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
++V SWT++I+G + ++AL F +M G R +EV + +
Sbjct: 550 -----------RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 598
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
ACA L L+ G+ IH A +GF ++ NAL+ +Y +CG +EE F+ +
Sbjct: 599 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
+W++++ GF M R G+ N+ TF + A S + +G++ ++
Sbjct: 659 AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 718
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
+ G E L+ + ++ G + +A + +S N V W A++ H
Sbjct: 719 TKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVST-KNEVSWNAIINAYSKH 771
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 141/345 (40%), Gaps = 45/345 (13%)
Query: 84 ILPDHFTCSFLLKAC-TISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHA 142
I P+H T +LL+ C + + GR +H+ + KLG SN L L Y G+ A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 143 RLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSE 202
+FD+MP++ + TWN MI L S +G LF M NV
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV----------------- 182
Query: 203 EALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFG--KSIHRFAEGNGFLRNVYVCNA 260
PNE T VL AC + G + F + IH G + VCN
Sbjct: 183 --------------TPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNP 227
Query: 261 LIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPN 320
LID+Y + G ++ RVFDG+R + SW +MI G + + M G+ P
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 321 HVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 380
F VL AC + ++ G + ++ + G LV L G L A +
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLK-LGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 381 ANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR-----HLSELDP 420
+NMS + V + L+ G E+AM HL L+P
Sbjct: 347 SNMS-QRDAVTYNTLINGL---SQCGYGEKAMELFKRMHLDGLEP 387
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 302/538 (56%), Gaps = 32/538 (5%)
Query: 56 WNSCLKFFAERGAPCDTISLF-LRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYV 114
W + + + ++ P + + L+ L R + P+ FT S + A I G+ IH ++
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 115 QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAAR 174
+ G S+ +L + L+ +Y CG + AR
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCG-------------------------------CIDEAR 273
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
++FD + ++V SWTS+I K E +FSE+ RPNE T VL ACA L
Sbjct: 274 NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLT 333
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
E GK +H + GF + ++L+DMY KCG +E V DG + +VSW+S+I
Sbjct: 334 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 393
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIV 354
G A + +++SG KP+HVTF+ VL AC+H GLV+KG EFF + + +
Sbjct: 394 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 453
Query: 355 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRH 414
+HY CLVDLL+R+GR E+ + VI+ M + P+ +W ++LGGC + NI LAEEA +
Sbjct: 454 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQE 513
Query: 415 LSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVA 474
L +++P N YV M+N+YA AGKWEE ++R+ M+ GV K PG S I H F+A
Sbjct: 514 LFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIA 573
Query: 475 GDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGL 534
D +HP I E +L KMK +GY+P TS+VL D+EDEQKE L HSEKLA+ + +
Sbjct: 574 ADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAI 633
Query: 535 INTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
++T+ G I++ KNLR C DCH A+K +S I R+I VRD RFHCF+NG C+C DYW
Sbjct: 634 LSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 169/315 (53%), Gaps = 3/315 (0%)
Query: 86 PDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLM 145
P T L++ C+ + + G+ +H +++ GF +++ N LL +YA CG AR +
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 146 FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL 205
FD+MP +D+ +WN+M+ G + AR LFD M ++ SWT++++G K EEAL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 206 RVFSEMER-EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
++S M+R SRPN TV + A A + + GK IH G + + ++L+DM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 265 YVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
Y KCGC++E +FD + E+ VVSW+SMI + ++ S +PN TF
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 384
GVL+AC+ + + G++ M R G P LVD+ ++ G +E A+ V+
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 385 VPPNGVVWGALLGGC 399
P+ V W +L+GGC
Sbjct: 382 -KPDLVSWTSLIGGC 395
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 127/331 (38%), Gaps = 82/331 (24%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W S + + + + SLF L P+ +T + +L AC + G+ +H
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y+ ++GF + L+ +Y CG A+ + D P+ D+ +W
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSW--------------- 388
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
TS+I G A+ G +EAL+ F + + G++P+ VT V VL AC
Sbjct: 389 ----------------TSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 233 LG----DLEFGKSI---HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
G LEF SI HR + + + Y C L+D+ + G E+ V M
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTS----DHYTC--LVDLLARSGRFEQLKSVISEM---- 482
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
MKP+ + VL CS G +D E
Sbjct: 483 ------------------------------PMKPSKFLWASVLGGCSTYGNIDLAEE--- 509
Query: 346 IMRRDYGIVP-GVEHYGCLVDLLSRAGRLEE 375
+ + I P Y + ++ + AG+ EE
Sbjct: 510 AAQELFKIEPENPVTYVTMANIYAAAGKWEE 540
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 198 CGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYV 257
CG ++ LR ++ +P T ++ C+Q LE GK +H +GF+ + +
Sbjct: 65 CG--QKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122
Query: 258 CNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFA 297
N L+ MY KCG L + +VFD M R + SW+ M+ G+A
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYA 162
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/597 (35%), Positives = 332/597 (55%), Gaps = 62/597 (10%)
Query: 27 HLKQARALLIKTNAP---------LSHVDLAHVPAIVPW----------------NSCLK 61
HL+Q ALL++T+ LS + L+ +P + + N+ ++
Sbjct: 26 HLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIR 85
Query: 62 FFAERGAPCDTISLFLRLRQLSILP-DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQ 120
F+ PC+ LF LR+ S LP + + SF LK C S D++ G IH + GF
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFL 145
Query: 121 SNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSM 180
S+ +L L+ LY++C ++ A +FD +
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDAC-------------------------------KVFDEI 174
Query: 181 PRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS---RPNEVTVVAVLVACAQLGDLE 237
P+R+ SW + S + + + L +F +M+ + +P+ VT + L ACA LG L+
Sbjct: 175 PKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALD 234
Query: 238 FGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFA 297
FGK +H F + NG + + N L+ MY +CG +++ +VF GMRER VVSW+++I G A
Sbjct: 235 FGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLA 294
Query: 298 MHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR-DYGIVPG 356
M+ M++ G+ P T G+L ACSH GLV +G FF MR ++ I P
Sbjct: 295 MNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPN 354
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLS 416
+ HYGC+VDLL RA L++A +I +M + P+ +W LLG CR+H +++L E + HL
Sbjct: 355 LHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLI 414
Query: 417 ELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGD 476
EL G YV++ N Y+ GKWE+V+ +R MK + + PGCS+I + G VHEF+ D
Sbjct: 415 ELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDD 474
Query: 477 ETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYR-HSEKLALVYGLI 535
+HP+ + I++M ++ ++K+ GY+ + + L ++E E+++ + R HSEKLA+ +G++
Sbjct: 475 VSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGIL 534
Query: 536 NTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
T PG IR+ KNLR C DCH K VS++ +R ++VRDR+RFH FK G+C+C D+W
Sbjct: 535 VTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/466 (41%), Positives = 286/466 (61%), Gaps = 2/466 (0%)
Query: 129 LLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSW 188
+L Y G A +F+ MP + V N MI L G++ AR +FDSM RN SW
Sbjct: 240 MLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASW 299
Query: 189 TSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEG 248
+VI + G EAL +F M+++G RP T++++L CA L L GK +H
Sbjct: 300 QTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 249 NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX 308
F +VYV + L+ MY+KCG L + +FD + ++ W+S+I G+A H
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKV 419
Query: 309 XXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLL 367
M SG KPN VTF+ L ACS+ G+V++G + + M +G+ P HY C+VD+L
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479
Query: 368 SRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYV 427
RAGR EA E+I +M+V P+ VWG+LLG CR H + +AE + L E++P N G Y+
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYI 539
Query: 428 VMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGD-ETHPQAKGIF 486
++SN+YA G+W +V+ +R+ MK+R V+K+PGCS ++ VH F G +HP+ + I
Sbjct: 540 LLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESIL 599
Query: 487 EMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIM 546
++ ++L ++ GY PD S L D+++E+K L HSE+LA+ Y L+ G+PIR+M
Sbjct: 600 KILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVM 659
Query: 547 KNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
KNLRVC DCHTA+K++S+++ REI++RD NRFH F+NG C+CKDYW
Sbjct: 660 KNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 38/243 (15%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
W + +K G + + LF+ +++ + P T +L C + + G+ +HA +
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
+ F ++ + ++L+ +Y CGE ++L+FD+ P +D+ WN
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN----------------- 401
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVACAQLG 234
S+ISG A G+ EEAL+VF EM GS +PNEVT VA L AC+ G
Sbjct: 402 --------------SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 235 DLEFGKSIHRFAEGNGFLRNV---YVCNALIDMYVKCGCLEEGCRVFDGMR-ERTVVSWS 290
+E G I+ E ++ + Y C ++DM + G E + D M E W
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYAC--MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWG 505
Query: 291 SMI 293
S++
Sbjct: 506 SLL 508
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 160/395 (40%), Gaps = 76/395 (19%)
Query: 122 NLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMP 181
N+I N L+ Y GE AR +FD MP+++V +W ++ + G V A LF MP
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 182 RRNVRSW-------------------------------TSVISGLAKCGMSEEALRVFSE 210
+N SW TS+I GL K G +EA +F E
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 211 MEREG---------------------------SRPNEVTVVAVLVACAQLGDLEFGKSIH 243
M EV+ ++L+ Q G +E + +
Sbjct: 198 MSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF 257
Query: 244 RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXX 303
++ V CNA+I + G + + RVFD M+ER SW ++I +
Sbjct: 258 EVMP----VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFEL 313
Query: 304 XXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT-IMRRDYGIVPGVEHYGC 362
M + G++P T I +L C+ + + G++ ++R + + V
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASV 371
Query: 363 LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL- 421
L+ + + G L +++ +I + + ++W +++ G H L EEA++ E+ PL
Sbjct: 372 LMTMYIKCGELVKSK-LIFDRFPSKDIIMWNSIISGYASH---GLGEEALKVFCEM-PLS 426
Query: 422 -----NDGYYVVMSNVYAEAGKWEEVSRIRRSMKS 451
N+ +V + + AG EE +I SM+S
Sbjct: 427 GSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 124/271 (45%), Gaps = 21/271 (7%)
Query: 142 ARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMS 201
AR +FD+MP +++ +WN ++ + G++ AR +FD MP RNV SWT+++ G G
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
+ A +F +M + N+V+ +L+ Q G ++ ++ + + + L
Sbjct: 127 DVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGL 182
Query: 262 IDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
K G ++E +FD M ER+V++W++M+ G+ + M +
Sbjct: 183 ----CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTE 234
Query: 322 VTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 381
V++ +L G ++ E F +M V V ++ L + G + +AR V
Sbjct: 235 VSWTSMLMGYVQNGRIEDAEELFEVMP-----VKPVIACNAMISGLGQKGEIAKARRVFD 289
Query: 382 NMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+M N W ++ ++H+ EA+
Sbjct: 290 SMK-ERNDASWQTVI---KIHERNGFELEAL 316
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 133/301 (44%), Gaps = 27/301 (8%)
Query: 156 TWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREG 215
T N+ I HL G + AR LFDS +++ SW S+++G M +A ++F EM
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR- 77
Query: 216 SRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGC 275
N ++ ++ + G+++ + + RNV AL+ YV G ++
Sbjct: 78 ---NIISWNGLVSGYMKNGEIDEARKVFDLMPE----RNVVSWTALVKGYVHNGKVDVAE 130
Query: 276 RVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG 335
+F M E+ VSW+ M++GF + MI +++ ++H G
Sbjct: 131 SLFWKMPEKNKVSWTVMLIGF-LQDGRIDDACKLYEMIPD---KDNIARTSMIHGLCKEG 186
Query: 336 LVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGAL 395
VD+ RE F M I + +V + R+++AR++ M V W ++
Sbjct: 187 RVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSM 240
Query: 396 LGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRR---SMKSR 452
L G + I+ AEE L E+ P+ + + + + G+ E+++ RR SMK R
Sbjct: 241 LMGYVQNGRIEDAEE----LFEVMPVKP--VIACNAMISGLGQKGEIAKARRVFDSMKER 294
Query: 453 G 453
Sbjct: 295 N 295
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/542 (37%), Positives = 306/542 (56%), Gaps = 33/542 (6%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W + + +++ G + +++F + + P+ FT + +L +C +S + G+ IH
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K + S++ + + LL +YA AG +
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAK-------------------------------AGQIKE 206
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
AR++F+ +P R+V S T++I+G A+ G+ EEAL +F + EG PN VT ++L A +
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L L+ GK H + N+LIDMY KCG L R+FD M ERT +SW++M
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326
Query: 293 IVGFAMHXXXXXXXXXXXXM-IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM-RRD 350
+VG++ H M +KP+ VT + VL CSH + D G F M +
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
YG PG EHYGC+VD+L RAGR++EA E I M P V G+LLG CR+H ++ + E
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
R L E++P N G YV++SN+YA AG+W +V+ +R M + V K PG S I + +H
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLAL 530
F A D THP+ + + +++ +KMK GY+PD S VL D+++EQKE L HSEKLAL
Sbjct: 507 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLAL 566
Query: 531 VYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKD 590
+GLI T G+PIR+ KNLR+C DCH K+ S++ RE+ +RD+NRFH +G C+C D
Sbjct: 567 TFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGD 626
Query: 591 YW 592
YW
Sbjct: 627 YW 628
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 147/310 (47%), Gaps = 35/310 (11%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
LL AC + G+ +HA++ K + L+ LL Y C D +
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKC----------DCLED-- 105
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
AR + D MP +NV SWT++IS ++ G S EAL VF+EM R
Sbjct: 106 -------------------ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
+PNE T VL +C + L GK IH + +++V ++L+DMY K G ++E
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 274 GCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSH 333
+F+ + ER VVS +++I G+A + GM PN+VT+ +L A S
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 334 VGLVDKGREFFT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVW 392
+ L+D G++ ++RR+ +++ L+D+ S+ G L AR + NM + W
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAISW 323
Query: 393 GALLGGCRLH 402
A+L G H
Sbjct: 324 NAMLVGYSKH 333
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDL 236
F S P V IS L G +EAL EM G A+L AC L
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 237 EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGF 296
G+ +H +L Y+ L+ Y KC CLE+ +V D M E+ VVSW++MI +
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR---DYGI 353
+ M+RS KPN TF VL +C + G++ ++ + D I
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVW-GALLGGCRLHKNIKLAEEAM 412
G L+D+ ++AG+++EARE+ +P VV A++ G + + L EEA+
Sbjct: 189 FVG----SSLLDMYAKAGQIKEAREIFE--CLPERDVVSCTAIIAG---YAQLGLDEEAL 239
Query: 413 RHLSEL 418
L
Sbjct: 240 EMFHRL 245
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/539 (36%), Positives = 299/539 (55%), Gaps = 31/539 (5%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W + +K A+ G + I F ++ + D + +L AC I G+ IHA
Sbjct: 236 VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHAC 295
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ + FQ ++ + + L+ +Y C +A+ +FD+
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR------------------------- 330
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
M ++NV SWT+++ G + G +EEA+++F +M+R G P+ T+ + ACA +
Sbjct: 331 ------MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
LE G H A +G + V V N+L+ +Y KCG +++ R+F+ M R VSW++M+
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
+A M++ G+KP+ VT GV+ ACS GLV+KG+ +F +M +YGI
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI 504
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
VP + HY C++DL SR+GRLEEA I M PP+ + W LL CR N+++ + A
Sbjct: 505 VPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAE 564
Query: 414 HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFV 473
L ELDP + Y ++S++YA GKW+ V+++RR M+ + VKK PG S I G +H F
Sbjct: 565 SLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFS 624
Query: 474 AGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYG 533
A DE+ P I+ E+L K+ GY PDTS V D+E+ K L HSE+LA+ +G
Sbjct: 625 ADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFG 684
Query: 534 LINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
LI G PIR+ KNLRVC DCH A K +S + REI+VRD RFH FK+G C+C D+W
Sbjct: 685 LIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 233/468 (49%), Gaps = 38/468 (8%)
Query: 54 VPWNSCLKFFAERGAPCDTISLF-LRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
V WN ++ ++ G + + +R S T +LK + + + G+ IH
Sbjct: 104 VTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHG 163
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V KLGF+S L++ + LL++YA+ G S A+ +F + ++ +N ++G L++ G +
Sbjct: 164 QVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIED 223
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A LF M + +V SW ++I GLA+ G+++EA+ F EM+ +G + ++ +VL AC
Sbjct: 224 ALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGG 282
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
LG + GK IH F ++YV +ALIDMY KC CL VFD M+++ VVSW++M
Sbjct: 283 LGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAM 342
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
+VG+ M RSG+ P+H T + AC++V +++G +F
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF-----HGKA 397
Query: 353 IVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC----RLHKN 404
I G+ HY LV L + G ++++ + M+V + V W A++ R +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVET 456
Query: 405 IKLAEEAMRHLSELDPLNDGYYVVMSNVY---AEAGKWEEVSRIRRSMKSR-GVKKTPGC 460
I+L ++ ++H L P DG V ++ V + AG E+ R + M S G+ + G
Sbjct: 457 IQLFDKMVQH--GLKP--DG--VTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 461 SSITID-----GVVHE---FVAGDETHPQAKGIFEMWEKLLVKMKMKG 500
S ID G + E F+ G P A G W LL + KG
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG----WTTLLSACRNKG 554
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 154/352 (43%), Gaps = 47/352 (13%)
Query: 108 RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA 167
++IH + + L N ++H YA +++AR +FD++PQ ++ +WN ++ A
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRP-NEVTVVAV 226
G + F+ +P R+ +W +I G + G+ A++ ++ M R+ S VT++ +
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
L + G + GK IH GF + V + L+ MY GC+ + +VF G+ +R
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 287 ------------------------------VSWSSMIVGFAMHXXXXXXXXXXXXMIRSG 316
VSW++MI G A + M G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFFT-IMRRDYG--IVPGVEHYGCLVDLLSRAGRL 373
+K + F VL AC +G +++G++ I+R ++ I G L+D+ + L
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG----SALIDMYCKCKCL 321
Query: 374 EEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR-----HLSELDP 420
A+ V M N V W A++ G + AEEA++ S +DP
Sbjct: 322 HYAKTVFDRMK-QKNVVSWTAMVVG---YGQTGRAEEAVKIFLDMQRSGIDP 369
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 111/243 (45%), Gaps = 33/243 (13%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W + + + + G + + +FL +++ I PDH+T + AC S + G H
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
G + + N L+ LY CG+ + +F++M +D +W
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW--------------- 440
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
T+++S A+ G + E +++F +M + G +P+ VT+ V+ AC++
Sbjct: 441 ----------------TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 233 LGDLEFGKSIHRFAEGN-GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR-ERTVVSWS 290
G +E G+ + G + ++ + +ID++ + G LEE R +GM + W+
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWT 544
Query: 291 SMI 293
+++
Sbjct: 545 TLL 547
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 310/540 (57%), Gaps = 36/540 (6%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ W + + +++ + L + + + ++ P+ +T S +L++C SD+ R++H
Sbjct: 127 VISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHC 183
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K G +S++ +++ L+ ++A GE A +FD+M D
Sbjct: 184 GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV---------------- 227
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
W S+I G A+ S+ AL +F M+R G + T+ +VL AC
Sbjct: 228 ---------------WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L LE G H + +++ + NAL+DMY KCG LE+ RVF+ M+ER V++WS+M
Sbjct: 273 LALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G A + M SG KPN++T +GVL ACSH GL++ G +F M++ YG
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
I P EHYGC++DLL +AG+L++A +++ M P+ V W LLG CR+ +N+ LAE A
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
+ + LDP + G Y ++SN+YA + KW+ V IR M+ RG+KK PGCS I ++ +H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Query: 473 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVY 532
+ GD +HPQ + + +L+ ++ GY+P+T+ VL D+E EQ E L HSEKLAL +
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570
Query: 533 GLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
GL+ IRI KNLR+C DCH KL S++E R IV+RD R+H F++G C+C DYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 172/377 (45%), Gaps = 47/377 (12%)
Query: 79 LRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGE 138
L+ + D T S L+K C ++ R +H + NLI + HLY +
Sbjct: 52 LQSHGLWADSATYSELIKCC------ISNRAVH--------EGNLICR----HLYFN--- 90
Query: 139 TSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKC 198
H +MF N++I + + A LFD MP+RNV SWT++IS +KC
Sbjct: 91 -GHRPMMF---------LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC 140
Query: 199 GMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVC 258
+ ++AL + M R+ RPN T +VL +C + D+ + +H G +V+V
Sbjct: 141 KIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVR 197
Query: 259 NALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMK 318
+ALID++ K G E+ VFD M + W+S+I GFA + M R+G
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 319 PNHVTFIGVLHACSHVGLVDKGREFFT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 377
T VL AC+ + L++ G + I++ D ++ LVD+ + G LE+A
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDAL 313
Query: 378 EVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDP--LNDGYYVVMSNVYA- 434
V M + + W ++ G L +N ++EA++ + Y ++ ++A
Sbjct: 314 RVFNQMK-ERDVITWSTMISG--LAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFAC 369
Query: 435 -EAGKWEEVSRIRRSMK 450
AG E+ RSMK
Sbjct: 370 SHAGLLEDGWYYFRSMK 386
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 204 ALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALID 263
A++ ++ G + T ++ C + G I R NG +++ N LI+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 264 MYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVT 323
MYVK L + ++FD M +R V+SW++MI ++ M+R ++PN T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 324 FIGVLHACS--------HVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 375
+ VL +C+ H G++ +G E +R L+D+ ++ G E+
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVR------------SALIDVFAKLGEPED 212
Query: 376 AREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHL 415
A V M V + +VW +++GG + +A E + +
Sbjct: 213 ALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 313/581 (53%), Gaps = 39/581 (6%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P IV WNS L +A +G D I++ R++ + P + S LL+A + G+ I
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA--- 167
H Y+ + ++ ++ L+ +Y G +AR++FD M +++ WN ++ L A
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 168 --------------------------------GDVGAARDLFDSMPRR----NVRSWTSV 191
G A D+ M + NV SWT++
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
SG +K G AL+VF +M+ EG PN T+ +L L L GK +H F
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 252 LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 311
+ + YV AL+DMY K G L+ +F G++ +++ SW+ M++G+AM
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 312 MIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAG 371
M+ +GM+P+ +TF VL C + GLV +G ++F +MR YGI+P +EH C+VDLL R+G
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 372 RLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSN 431
L+EA + I MS+ P+ +WGA L C++H++++LAE A + L L+P N Y++M N
Sbjct: 548 YLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMIN 607
Query: 432 VYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEK 491
+Y+ +WE+V RIR M++ V+ S I ID VH F A +THP I+ K
Sbjct: 608 LYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYK 667
Query: 492 LLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRV 551
L+ +MK GY+PDTS + D+ D +KE L H+EKLA+ YGLI K PIR++KN +
Sbjct: 668 LVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNI 727
Query: 552 CEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
C D HT K +S + NREIV+++ R H F++G C+C D W
Sbjct: 728 CSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 170/355 (47%), Gaps = 10/355 (2%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+ WN + G + LF ++ T LL+ C+ GR IH Y
Sbjct: 55 LAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGY 114
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
V +LG +SN+ + N L+ +Y+ G+ +R +F+ M +++++WN ++ G V A
Sbjct: 115 VLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDA 174
Query: 174 RDLFDSMP----RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
L D M + ++ +W S++SG A G+S++A+ V M+ G +P+ ++ ++L A
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
A+ G L+ GK+IH + N +VYV LIDMY+K G L VFD M + +V+W
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAW 294
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+S++ G + M + G+KP+ +T+ + + +G +K + M +
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-K 353
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLG--GC 399
+ G+ P V + + S+ G A +V M V PN LL GC
Sbjct: 354 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC 408
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 171/413 (41%), Gaps = 50/413 (12%)
Query: 132 LYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSV 191
+Y G T H L+ + D + +G +G A LFD MP+R+ +W +
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
+ + G E+A+ +F EM+ G++ + T+V +L C+ G+ IH + G
Sbjct: 61 VMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL 120
Query: 252 LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT-------------------------- 285
NV +CN+LI MY + G LE +VF+ M++R
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDE 180
Query: 286 ---------VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGL 336
+V+W+S++ G+A M +G+KP+ + +L A + G
Sbjct: 181 MEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 337 VDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
+ G+ + R+ + V L+D+ + G L AR V +M N V W +L+
Sbjct: 241 LKLGKAIHGYILRNQ-LWYDVYVETTLIDMYIKTGYLPYARMVF-DMMDAKNIVAWNSLV 298
Query: 397 GGCRLHKNIKLAEEAMRHLSELDPLNDGY-YVVMSNVYAEAGKWEEVSRIRRSMKSRGVK 455
G +K AE M + + D + +++ YA GK E+ + MK +GV
Sbjct: 299 SGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV- 357
Query: 456 KTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 508
P S T +G G F K+ +KM+ +G P+ + +
Sbjct: 358 -APNVVSWT------AIFSG----CSKNGNFRNALKVFIKMQEEGVGPNAATM 399
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 304/541 (56%), Gaps = 32/541 (5%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVT-GRIIH 111
+V WN+ + +AE P ++ F +R + ++ T +L AC + D++ G+ +H
Sbjct: 428 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLH 487
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
AY+ GF+S+ ++N L+ +YA CG D+
Sbjct: 488 AYIVSAGFESDEHVKNSLITMYAKCG-------------------------------DLS 516
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+++DLF+ + RN+ +W ++++ A G EE L++ S+M G ++ + L A A
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 576
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+L LE G+ +H A GF + ++ NA DMY KCG + E ++ R++ SW+
Sbjct: 577 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 636
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
+I H M+ G+KP HVTF+ +L ACSH GLVDKG ++ ++ RD+
Sbjct: 637 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDF 696
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G+ P +EH C++DLL R+GRL EA I+ M + PN +VW +LL C++H N+ +A
Sbjct: 697 GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKA 756
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
+LS+L+P +D YV+ SN++A G+WE+V +R+ M + +KK CS + + V
Sbjct: 757 AENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 816
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALV 531
F GD THPQ I+ E + +K GY+ DTS L D ++EQKE L+ HSE+LAL
Sbjct: 817 FGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALA 876
Query: 532 YGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDY 591
Y L++T G +RI KNLR+C DCH+ K VS + R IV+RD+ RFH F+ G C+CKDY
Sbjct: 877 YALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDY 936
Query: 592 W 592
W
Sbjct: 937 W 937
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 154/351 (43%), Gaps = 44/351 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ WNS + F G D + L + ++ T + L AC GRI+H
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V G N I+ N L+ +Y GE S +R + +MP++DV WN +IG
Sbjct: 387 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG---------- 436
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
G A+ ++AL F M EG N +TVV+VL AC
Sbjct: 437 ---------------------GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 475
Query: 233 LGD-LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
GD LE GK +H + GF + +V N+LI MY KCG L +F+G+ R +++W++
Sbjct: 476 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 535
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
M+ A H M G+ + +F L A + + ++++G++ +
Sbjct: 536 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL----- 590
Query: 352 GIVPGVEH----YGCLVDLLSRAGRLEEAREVI---ANMSVPPNGVVWGAL 395
+ G EH + D+ S+ G + E +++ N S+P ++ AL
Sbjct: 591 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 641
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 152/351 (43%), Gaps = 43/351 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W S + ++++G P + I ++ +R + + + S ++ +C + D GR I
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 184
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V K G +S L ++N L+ + L S G+V
Sbjct: 185 QVVKSGLESKLAVENSLISM-------------------------------LGSMGNVDY 213
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A +FD M R+ SW S+ + A+ G EE+ R+FS M R N TV +L
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ ++G+ IH GF V VCN L+ MY G E VF M + ++SW+S+
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
+ F MI SG N+VTF L AC +KGR ++
Sbjct: 334 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV----- 388
Query: 353 IVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGG 398
+V G+ + LV + + G + E+R V+ M P VV W AL+GG
Sbjct: 389 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM--PRRDVVAWNALIGG 437
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 156/370 (42%), Gaps = 45/370 (12%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+ WNS +A+ G ++ +F +R+ + T S LL GR IH
Sbjct: 227 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
V K+GF S + + N LL +YA G + A L+F +M
Sbjct: 287 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM------------------------ 322
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
P +++ SW S+++ G S +AL + M G N VT + L AC
Sbjct: 323 -------PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 375
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
E G+ +H +G N + NAL+ MY K G + E RV M R VV+W+++I
Sbjct: 376 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 435
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG-LVDKGREFFTIMRRDYG 352
G+A M G+ N++T + VL AC G L+++G+ Y
Sbjct: 436 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA-----YI 490
Query: 353 IVPGVEH----YGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
+ G E L+ + ++ G L ++++ + N + W A+L H +
Sbjct: 491 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH---G 546
Query: 409 EEAMRHLSEL 418
EE ++ +S++
Sbjct: 547 EEVLKLVSKM 556
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 148/363 (40%), Gaps = 45/363 (12%)
Query: 41 PLSHV-DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACT 99
P H+ D+ V V WN+ + G + + F ++ L I P F + L+ AC
Sbjct: 10 PARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACG 69
Query: 100 ISSDIV-TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWN 158
S + G +H +V K G S++ + +LHLY G S
Sbjct: 70 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVS------------------ 111
Query: 159 IMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRP 218
+R +F+ MP RNV SWTS++ G + G EE + ++ M EG
Sbjct: 112 -------------CSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGC 158
Query: 219 NEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVF 278
NE ++ V+ +C L D G+ I +G + V N+LI M G ++ +F
Sbjct: 159 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIF 218
Query: 279 DGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
D M ER +SW+S+ +A + M R + N T +L HV
Sbjct: 219 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 278
Query: 339 KGREFFTIMRRDYGIVPGVEHYGCLVDLLSR----AGRLEEAREVIANMSVPPNGVV-WG 393
GR ++ + G + C+ + L R AGR EA V M P ++ W
Sbjct: 279 WGRGIHGLV-----VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM--PTKDLISWN 331
Query: 394 ALL 396
+L+
Sbjct: 332 SLM 334
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 6/257 (2%)
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
G V AR LFD MP RN SW +++SG+ + G+ E + F +M G +P+ + +++
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 228 VACAQLGDL-EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
AC + G + G +H F +G L +VYV A++ +Y G + +VF+ M +R V
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
VSW+S++VG++ M G+ N + V+ +C + GR+
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ 185
Query: 347 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK 406
+ + G+ + L+ +L G ++ A + MS + + W ++ + +I
Sbjct: 186 VVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHI- 242
Query: 407 LAEEAMRHLSELDPLND 423
EE+ R S + +D
Sbjct: 243 --EESFRIFSLMRRFHD 257
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/577 (36%), Positives = 313/577 (54%), Gaps = 42/577 (7%)
Query: 16 THLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISL 75
T L A S+N +K+A L + N L V WN+ + + + T+ L
Sbjct: 456 TALIDAYSRNRCMKEAEILFERHNFDL-----------VAWNAMMAGYTQSHDGHKTLKL 504
Query: 76 FLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYAS 135
F + + D FT + + K C I G+ +HAY K G+ +L + + +L +Y
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVK 564
Query: 136 CGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGL 195
CG D+ AA+ FDS+P + +WT++ISG
Sbjct: 565 CG-------------------------------DMSAAQFAFDSIPVPDDVAWTTMISGC 593
Query: 196 AKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNV 255
+ G E A VFS+M G P+E T+ + A + L LE G+ IH A +
Sbjct: 594 IENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP 653
Query: 256 YVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRS 315
+V +L+DMY KCG +++ +F + + +W++M+VG A H M
Sbjct: 654 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Query: 316 GMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 375
G+KP+ VTFIGVL ACSH GLV + + M DYGI P +EHY CL D L RAG +++
Sbjct: 714 GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQ 773
Query: 376 AREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAE 435
A +I +MS+ + ++ LL CR+ + + + L EL+PL+ YV++SN+YA
Sbjct: 774 AENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAA 833
Query: 436 AGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVK 495
A KW+E+ R MK VKK PG S I + +H FV D ++ Q + I+ + ++
Sbjct: 834 ASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRD 893
Query: 496 MKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDC 555
+K +GY+P+T L+D+E+E+KE LY HSEKLA+ +GL++T P PIR++KNLRVC DC
Sbjct: 894 IKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDC 953
Query: 556 HTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
H A+K ++++ NREIV+RD NRFH FK+G C+C DYW
Sbjct: 954 HNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 133/326 (40%), Gaps = 45/326 (13%)
Query: 53 IVPWNSCLKFFAERGAPC------DTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVT 106
+V WNS L +A+ + C LF LRQ + T S +LK C S +
Sbjct: 105 LVSWNSILAAYAQ-SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
H Y K+G + + L+++Y G+ +++F++MP +DV WN+M+ +
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 167 AGDVGAARDL-------------------------------FDSMPRRNVRSWTSVI--- 192
G A DL S N S S I
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFR 283
Query: 193 -SGLAK---CGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEG 248
GL++ G L+ F++M ++VT + +L ++ L G+ +H A
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 249 NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX 308
G + V N+LI+MY K VFD M ER ++SW+S+I G A +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHV 334
++R G+KP+ T VL A S +
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSL 429
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 152/360 (42%), Gaps = 45/360 (12%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D + V I+ N L + G + F + + + D T +L +
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
G+ +H KLG L + N L+++Y +
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK--------------------------- 365
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
G AR +FD+M R++ SW SVI+G+A+ G+ EA+ +F ++ R G +P++ T+ +
Sbjct: 366 ----FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 226 VLVACAQLGD-LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER 284
VL A + L + L K +H A + + +V ALID Y + C++E +F+
Sbjct: 422 VLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNF 480
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
+V+W++M+ G+ M + G + + T V C + +++G++
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 345 TIMRRDYGIVPGVEH----YGCLVDLLSRAGRLEEAREVIANMSVP-PNGVVWGALLGGC 399
Y I G + ++D+ + G + A+ A S+P P+ V W ++ GC
Sbjct: 541 A-----YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ--FAFDSIPVPDDVAWTTMISGC 593
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 31/234 (13%)
Query: 93 FLLKACTISSDIVTGRIIHAYVQKLGFQSN--LILQNMLLHLYASCGETSHARLMFDKMP 150
FL A T SSD++ G+ HA + L F+ N L N L+ +Y+ CG ++AR +FDKMP
Sbjct: 45 FLRNAIT-SSDLMLGKCTHARI--LTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 151 QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSE 210
+D+ +WN ++ + + V+ + ++A +F
Sbjct: 102 DRDLVSWNSILAAYAQSSEC--------------------VVENI------QQAFLLFRI 135
Query: 211 MEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGC 270
+ ++ + +T+ +L C G + +S H +A G + +V AL+++Y+K G
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 271 LEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
++EG +F+ M R VV W+ M+ + SG+ PN +T
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 234 GDLEFGKSIHRFAEGNGFLRNV--YVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
DL GK H A F N ++ N LI MY KCG L RVFD M +R +VSW+S
Sbjct: 53 SDLMLGKCTH--ARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHV-----TFIGVLHACSHVGLVDKGREFFTI 346
++ +A ++ ++ + V T +L C H G V F
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF--- 167
Query: 347 MRRDYGIVPGVEH----YGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGGCRL 401
Y G++ G LV++ + G+++E + + M P VV W +L +
Sbjct: 168 --HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM--PYRDVVLWNLML---KA 220
Query: 402 HKNIKLAEEAMR-----HLSELDP 420
+ + EEA+ H S L+P
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNP 244
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/545 (36%), Positives = 302/545 (55%), Gaps = 37/545 (6%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
V +V W + + F + + + LF +++ + P+ FT S +L A + ++
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV----ISPSE 414
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+HA V K ++ + + LL Y G+ A +F + +D+
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV-------------- 460
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+W+++++G A+ G +E A+++F E+ + G +PNE T ++L
Sbjct: 461 -----------------AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 230 CAQL-GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
CA + GK H FA + ++ V +AL+ MY K G +E VF RE+ +VS
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
W+SMI G+A H M + +K + VTFIGV AC+H GLV++G ++F IM
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
RD I P EH C+VDL SRAG+LE+A +VI NM P +W +L CR+HK +L
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGV 468
A + + P + YV++SN+YAE+G W+E +++R+ M R VKK PG S I +
Sbjct: 684 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 743
Query: 469 VHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKL 528
+ F+AGD +HP I+ E L ++K GY PDTS VL D++DE KE L +HSE+L
Sbjct: 744 TYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERL 803
Query: 529 ALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCF-KNGACT 587
A+ +GLI T G P+ I+KNLRVC DCH +KL+++IE REIVVRD NRFH F +G C+
Sbjct: 804 AIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCS 863
Query: 588 CKDYW 592
C D+W
Sbjct: 864 CGDFW 868
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 182/448 (40%), Gaps = 86/448 (19%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGR--II 110
+V W + + +A + ++LF+R++ P+ FT F ++ + V GR +
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFT--FAAALGVLAEEGVGGRGLQV 216
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H V K G + + N L++LY CG AR++FDK + V TWN MI + G
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 171 GAARDLFDSMPRRNVR----SWTSVIS--------------------------------- 193
A +F SM VR S+ SVI
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336
Query: 194 --GLAKCGMSEEALRVF--------------------------------SEMEREGSRPN 219
+KC +ALR+F SEM+R+G RPN
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPN 396
Query: 220 EVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFD 279
E T +L A + E +H + R+ V AL+D YVK G +EE +VF
Sbjct: 397 EFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 280 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGL-VD 338
G+ ++ +V+WS+M+ G+A + + G+KPN TF +L+ C+ +
Sbjct: 453 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 512
Query: 339 KGREF--FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
+G++F F I R + + L+ + ++ G +E A EV + V W +++
Sbjct: 513 QGKQFHGFAIKSR---LDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMI 568
Query: 397 GGCRLHKNIKLAEEAMRHLSELDPLNDG 424
G H A + + + + DG
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 35/361 (9%)
Query: 58 SCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKL 117
S L F+ G + LFL + +L + D S +LK D + GR +H K
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKF 122
Query: 118 GFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLF 177
GF DV+ ++ + + R +F
Sbjct: 123 GFL-------------------------------DDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 178 DSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLE 237
D M RNV +WT++ISG A+ M++E L +F M+ EG++PN T A L A+ G
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 238 FGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFA 297
G +H NG + + V N+LI++Y+KCG + + +FD ++VV+W+SMI G+A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 298 MHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGV 357
+ M + ++ + +F V+ C+++ + + + + YG +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK-YGFLFDQ 330
Query: 358 EHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSE 417
L+ S+ + +A + + N V W A++ G L + K EEA+ SE
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF-LQNDGK--EEAVDLFSE 387
Query: 418 L 418
+
Sbjct: 388 M 388
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 122/234 (52%), Gaps = 2/234 (0%)
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
+S+ + A +LFD P R+ S+ S++ G ++ G ++EA R+F + R G +
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER 284
+VL A L D FG+ +H GFL +V V +L+D Y+K ++G +VFD M+ER
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
VV+W+++I G+A + M G +PN TF L + G+ +G +
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
T++ ++ G+ + L++L + G + +AR ++ + + + V W +++ G
Sbjct: 218 TVVVKN-GLDKTIPVSNSLINLYLKCGNVRKAR-ILFDKTEVKSVVTWNSMISG 269
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/553 (37%), Positives = 318/553 (57%), Gaps = 48/553 (8%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILP------DHFTCSFLLKACTISSDI 104
P WN+ ++ FA P S + + Q S D TCSF LKAC +
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCS 125
Query: 105 VTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
+H + + G ++ +L LL Y+
Sbjct: 126 SAMDQLHCQINRRGLSADSLLCTTLLDAYSK----------------------------- 156
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
GD+ +A LFD MP R+V SW ++I+GL + EA+ ++ ME EG R +EVTVV
Sbjct: 157 --NGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVV 214
Query: 225 AVLVACAQLGDLEFGKSI-HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR- 282
A L AC+ LGD++ G++I H ++ N V V NA IDMY KCG +++ +VF+
Sbjct: 215 AALGACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTG 269
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
+++VV+W++MI GFA+H + +G+KP+ V+++ L AC H GLV+ G
Sbjct: 270 KKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLS 329
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
F M G+ ++HYGC+VDLLSRAGRL EA ++I +MS+ P+ V+W +LLG ++
Sbjct: 330 VFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIY 388
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSS 462
++++AE A R + E+ NDG +V++SNVYA G+W++V R+R M+S+ VKK PG S
Sbjct: 389 SDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSY 448
Query: 463 ITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLY 522
I G +HEF D++H Q + I+E +++ K++ GY+ T +VL D+ +E+KE L
Sbjct: 449 IEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALC 508
Query: 523 RHSEKLALVYGLI---NTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFH 579
HSEKLA+ YGL+ P+R++ NLR+C DCH K +S+I REI+VRDR RFH
Sbjct: 509 YHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFH 568
Query: 580 CFKNGACTCKDYW 592
FK+G+C+C+D+W
Sbjct: 569 RFKDGSCSCRDFW 581
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 17/262 (6%)
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS------RPNEV 221
GD+ A +F +P+ W ++I G A A + M ++ S R + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
T L ACA+ +H G + +C L+D Y K G L ++FD M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 282 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGR 341
R V SW+++I G M G++ + VT + L ACSH+G V +G
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 342 EFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRL 401
F D IV +D+ S+ G +++A +V + + V W ++ G +
Sbjct: 231 NIFHGYSNDNVIVSNAA-----IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 402 HKNIKLAEEAMRHLSELDPLND 423
H EA R L D L D
Sbjct: 286 HG------EAHRALEIFDKLED 301
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/474 (40%), Positives = 283/474 (59%), Gaps = 1/474 (0%)
Query: 120 QSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDS 179
+ N + N ++ Y CG+ A F P + V W MI + A V A +F
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKD 242
Query: 180 MP-RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEF 238
M +N+ +W ++ISG + E+ L++F M EG RPN + + L+ C++L L+
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL 302
Query: 239 GKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAM 298
G+ IH+ + +V +LI MY KCG L + ++F+ M+++ VV+W++MI G+A
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 362
Query: 299 HXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVE 358
H MI + ++P+ +TF+ VL AC+H GLV+ G +F M RDY + P +
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422
Query: 359 HYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
HY C+VDLL RAG+LEEA ++I +M P+ V+G LLG CR+HKN++LAE A L +L
Sbjct: 423 HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 482
Query: 419 DPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDET 478
+ N YV ++N+YA +WE+V+R+R+ MK V K PG S I I VH F + D
Sbjct: 483 NSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI 542
Query: 479 HPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTK 538
HP+ I + ++L KMK+ GY P+ L ++E+EQKE L HSEKLA+ +G I
Sbjct: 543 HPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLP 602
Query: 539 PGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
G I++ KNLR+C DCH A+K +SEIE REI+VRD RFH FK+G+C+C DYW
Sbjct: 603 QGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 166/404 (41%), Gaps = 55/404 (13%)
Query: 89 FTCSFLLKACTISSDIVTG-RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFD 147
F + ++ C S DI R+ H K + + ++L+ + A +FD
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 148 KMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRV 207
++P+ D ++NIM+ + + A+ FD MP ++ SW ++I+G A+ G E+A +
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 208 FSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVK 267
F M + NEV+ A++ + GDLE + A +R V A+I Y+K
Sbjct: 178 FYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAP----VRGVVAWTAMITGYMK 229
Query: 268 CGCLEEGCRVFDGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIG 326
+E +F M + +V+W++MI G+ + M+ G++PN
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 327 VLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP 386
L CS + + GR+ I+ + + V L+ + + G L +A ++ M
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-K 347
Query: 387 PNGVVWGALLGGCRLHKNIKLA-------------------------------------- 408
+ V W A++ G H N A
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
E+M +++P D +Y M ++ AGK EE ++ RSM R
Sbjct: 408 FESMVRDYKVEPQPD-HYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 46/244 (18%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D+ +V WN+ + + E P D + LF + + I P+ S L C+ S +
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
GR IH V K +++ L+ +Y CGE A +F+ M ++DV WN M
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAM----- 356
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
ISG A+ G +++AL +F EM RP+ +T VA
Sbjct: 357 --------------------------ISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNV--------YVCNALIDMYVKCGCLEEGCRV 277
VL+AC G + G A +R+ Y C ++D+ + G LEE ++
Sbjct: 391 VLLACNHAGLVNIG-----MAYFESMVRDYKVEPQPDHYTC--MVDLLGRAGKLEEALKL 443
Query: 278 FDGM 281
M
Sbjct: 444 IRSM 447
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 99/248 (39%), Gaps = 47/248 (18%)
Query: 151 QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSE 210
Q + N +I + +GD+ A +F M +N +W S++ G++K
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISK------------- 104
Query: 211 MEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGC 270
+ SR ++ QL D E + F N+ ++ YV+
Sbjct: 105 ---DPSR---------MMEAHQLFD--------EIPEPDTFSYNI-----MLSCYVRNVN 139
Query: 271 LEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
E+ FD M + SW++MI G+A + S M+ N V++ ++
Sbjct: 140 FEKAQSFFDRMPFKDAASWNTMITGYARR----GEMEKARELFYSMMEKNEVSWNAMISG 195
Query: 331 CSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGV 390
G ++K FF + V GV + ++ +A ++E A + +M+V N V
Sbjct: 196 YIECGDLEKASHFFKV-----APVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 391 VWGALLGG 398
W A++ G
Sbjct: 251 TWNAMISG 258
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/467 (41%), Positives = 282/467 (60%), Gaps = 2/467 (0%)
Query: 127 NMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR 186
+MLL Y G A F+ MP + V N MI G++ AR +FD M R+
Sbjct: 239 SMLLG-YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA 246
+W +I + G EAL +F++M+++G RP+ +++++L CA L L++G+ +H
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 247 EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXX 306
F +VYV + L+ MYVKCG L + VFD + ++ W+S+I G+A H
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 307 XXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDL 366
M SG PN VT I +L ACS+ G +++G E F M + + P VEHY C VD+
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 367 LSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYY 426
L RAG++++A E+I +M++ P+ VWGALLG C+ H + LAE A + L E +P N G Y
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTY 537
Query: 427 VVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGD-ETHPQAKGI 485
V++S++ A KW +V+ +R++M++ V K PGCS I + VH F G + HP+ I
Sbjct: 538 VLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMI 597
Query: 486 FEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRI 545
M EK ++ GY PD S VL D+++E+K L RHSE+LA+ YGL+ G+PIR+
Sbjct: 598 LMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRV 657
Query: 546 MKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
MKNLRVC DCH A+KL+S++ REI++RD NRFH F NG C+C+DYW
Sbjct: 658 MKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 190/451 (42%), Gaps = 56/451 (12%)
Query: 37 KTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLK 96
K N D AI WNS + + G P + LF + + +++ + S +K
Sbjct: 32 KINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIK 91
Query: 97 ACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVAT 156
+ IV R V +L + N++ ++ Y G A +F +MP+++ +
Sbjct: 92 ----NRMIVEAR----NVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 157 WNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM-ERE- 214
W +M G LI G + AR L+D MP ++V + T++I GL + G +EA +F EM ER
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 215 --------GSRPN-----------------EVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
G R N EV+ ++L+ G +E +
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP-- 261
Query: 250 GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 309
++ V CNA+I + + G + + RVFD M +R +W MI +
Sbjct: 262 --MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLF 319
Query: 310 XXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR----DYGIVPGVEHYGCLVD 365
M + G++P+ + I +L C+ + + GR+ + R D V V L+
Sbjct: 320 AQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV-----LMT 374
Query: 366 LLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL---- 421
+ + G L +A+ V S + ++W +++ G H L EEA++ E+
Sbjct: 375 MYVKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASH---GLGEEALKIFHEMPSSGTMP 430
Query: 422 NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
N + + + AGK EE I SM+S+
Sbjct: 431 NKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 35/238 (14%)
Query: 137 GETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLA 196
G+ + AR FD + + + +WN ++ S G AR LFD M RNV SW ++SG
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 197 KCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIH-RFAEGNGF---- 251
K M EA VF M N V+ A++ Q G + +S+ R E N
Sbjct: 91 KNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTV 146
Query: 252 ----------------------LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
+++V +I + G ++E +FD MRER VV+W
Sbjct: 147 MFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTW 206
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
++MI G+ + M + V++ +L + G ++ EFF +M
Sbjct: 207 TTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 103/260 (39%), Gaps = 53/260 (20%)
Query: 161 IGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNE 220
I L G + AR FDS+ + + SW S++SG G+ +EA ++F EM
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSE------- 76
Query: 221 VTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG 280
RNV N L+ Y+K + E VF+
Sbjct: 77 --------------------------------RNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 281 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKG 340
M ER VVSW++M+ G+ M + N V++ + G +DK
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKA 160
Query: 341 REFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCR 400
R+ + +M V V ++ L R GR++EAR + M N V W ++ G R
Sbjct: 161 RKLYDMMP-----VKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGYR 214
Query: 401 LHKNIKLAEEAMRHLSELDP 420
+ + +A R L E+ P
Sbjct: 215 QNNRVDVA----RKLFEVMP 230
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/547 (37%), Positives = 298/547 (54%), Gaps = 37/547 (6%)
Query: 52 AIVPWNSCLKFFAER-GAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+++ W + + + + + I+LF + Q + P+HFT S KAC SD G+
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+ K G SN + N ++ ++ D+M
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKS----------DRMED------------------ 426
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
A+ F+S+ +N+ S+ + + G + E+A ++ SE+ + T ++L
Sbjct: 427 ---AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
A +G + G+ IH G N VCNALI MY KCG ++ RVF+ M R V+SW
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+SMI GFA H MI G+KPN VT++ +L ACSHVGLV +G F M
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
D+ I P +EHY C+VDLL RAG L +A E I M + +VW LG CR+H N +L +
Sbjct: 604 DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGK 663
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
A R + ELDP Y+ +SN+YA AGKWEE + +RR MK R + K GCS I + +
Sbjct: 664 LAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKI 723
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEI----FLYRHS 525
H+F GD HP A I++ ++L+ ++K GY+PDT +VL +E+E E LY+HS
Sbjct: 724 HKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHS 783
Query: 526 EKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGA 585
EK+A+ +GLI+T P+R+ KNLRVC DCH A+K +S + REIV+RD NRFH FK+G
Sbjct: 784 EKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGK 843
Query: 586 CTCKDYW 592
C+C DYW
Sbjct: 844 CSCNDYW 850
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 182/376 (48%), Gaps = 51/376 (13%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W++ + + G D I +F+ +L ++P+ + + +++AC+ S + GR+
Sbjct: 131 VVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLG 190
Query: 113 YVQKLG-FQSNLILQNMLLHLYASCGETS--HARLMFDKMPQQDVATWNIMIGHLISAGD 169
++ K G F+S++ + L+ ++ GE S +A +FDKM + +V TW +MI + G
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRCMQMG- 248
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
PR EA+R F +M G ++ T+ +V A
Sbjct: 249 ----------FPR--------------------EAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC---GCLEEGCRVFDGMRERTV 286
CA+L +L GK +H +A +G + +V +L+DMY KC G +++ +VFD M + +V
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 287 VSWSSMIVGFAMH-XXXXXXXXXXXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGREFF 344
+SW+++I G+ + MI G ++PNH TF AC ++ G++
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 345 -TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG-CRLH 402
+R G+ ++ + ++ R+E+A+ ++S N V + L G CR
Sbjct: 397 GQAFKR--GLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR-- 451
Query: 403 KNIKLAEEAMRHLSEL 418
N+ E+A + LSE+
Sbjct: 452 -NLNF-EQAFKLLSEI 465
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 24/371 (6%)
Query: 137 GETSHARLM-FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPR---RNVRSWTSVI 192
G+ HARL+ FD P D +N +I +GD A D+F++M R R+V SW++++
Sbjct: 81 GKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 193 SGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNG-F 251
+ G +A++VF E G PN+ AV+ AC+ + G+ F G F
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 252 LRNVYVCNALIDMYVKC-GCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 310
+V V +LIDM+VK E +VFD M E VV+W+ MI
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258
Query: 311 XMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRA 370
M+ SG + + T V AC+ + + G++ + R G+V VE LVD+ ++
Sbjct: 259 DMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDDVE--CSLVDMYAKC 315
Query: 371 ---GRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY-- 425
G +++ R+V M + + W AL+ G KN LA EA+ SE+ + G+
Sbjct: 316 SADGSVDDCRKVFDRME-DHSVMSWTALITG--YMKNCNLATEAINLFSEM--ITQGHVE 370
Query: 426 --YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 483
+ S+ + G + R+ + + + K+ +S + V+ FV D +
Sbjct: 371 PNHFTFSSAFKACGNLSD-PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 484 GIFEMWEKLLV 494
+ EK LV
Sbjct: 430 AFESLSEKNLV 440
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 16/249 (6%)
Query: 204 ALRVFSEMEREGSRP-NEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALI 262
A+ M R+G RP + VT ++L +C + D GK +H + + N+LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 263 DMYVKCGCLEEGCRVFDGMR---ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
+Y K G + VF+ MR +R VVSWS+M+ + + + G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGC-LVDLLSRA-GRLEEAR 377
N + V+ ACS+ V GR + + G GC L+D+ + E A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKT-GHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 378 EVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY---YVVMSNVYA 434
+V MS N V W ++ C + EA+R LD + G+ +S+V++
Sbjct: 224 KVFDKMS-ELNVVTWTLMITRC---MQMGFPREAIRFF--LDMVLSGFESDKFTLSSVFS 277
Query: 435 EAGKWEEVS 443
+ E +S
Sbjct: 278 ACAELENLS 286
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 297/541 (54%), Gaps = 32/541 (5%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ WN+ + + + +SLF + L PD +T + + G+ IH
Sbjct: 56 LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHG 115
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y K G + +L++ + L H+Y G+ +
Sbjct: 116 YTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI---------------------------- 147
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
+ SMP RN+ +W ++I G A+ G E L ++ M+ G RPN++T V VL +C+
Sbjct: 148 ---VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L G+ IH A G V V ++LI MY KCGCL + + F + V WSSM
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSM 264
Query: 293 IVGFAMHXXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
I + H M ++ M+ N V F+ +L+ACSH GL DKG E F +M Y
Sbjct: 265 ISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKY 324
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G PG++HY C+VDLL RAG L++A +I +M + + V+W LL C +HKN ++A+
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
+ + ++DP + YV+++NV+A A +W +VS +R+SM+ + VKK G S G VH+
Sbjct: 385 FKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQ 444
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALV 531
F GD + ++K I+ ++L ++MK+KGY PDT+ VL DM++E+KE L +HSEKLA+
Sbjct: 445 FKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVA 504
Query: 532 YGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDY 591
+ L+ G PIRI+KNLRVC DCH A K +S I+NREI +RD +RFH F NG C+C DY
Sbjct: 505 FALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDY 564
Query: 592 W 592
W
Sbjct: 565 W 565
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 130 LHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWT 189
+ +Y+ G+ A ++ +M +++ + NI+I + AGD+ AR +FD MP R + +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
++I+GL + +EE L +F EM G P+E T+ +V A L + G+ IH +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 250 GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 309
G ++ V ++L MY++ G L++G V M R +V+W+++I+G A +
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 310 XXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSR 369
M SG +PN +TF+ VL +CS + + +G++ + G V L+ + S+
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYSK 239
Query: 370 AGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVM 429
G L +A + + + V+W +++ H A E ++E + +
Sbjct: 240 CGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 298
Query: 430 SNVYA 434
+ +YA
Sbjct: 299 NLLYA 303
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/582 (36%), Positives = 316/582 (54%), Gaps = 40/582 (6%)
Query: 18 LDHATSQNHHLKQARALLIKTNAPLSHVDLA--HV---PAIVPWNSCLKFFAERGAPCDT 72
L H S +HL R + LSH L H P+ WN ++ F+ +P ++
Sbjct: 33 LQHHPSIFNHL--LRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNS 90
Query: 73 ISLFLRLRQLSI-LPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLH 131
I + R+ S+ PD FT +F LK+C I IH V + GF + I+ L+
Sbjct: 91 ILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVR 150
Query: 132 LYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSV 191
Y++ G A +FD+MP +D+ +WN+M
Sbjct: 151 CYSANGSVEIASKVFDEMPVRDLVSWNVM------------------------------- 179
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
I + G+ +AL ++ M EG + T+VA+L +CA + L G +HR A
Sbjct: 180 ICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRC 239
Query: 252 LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 311
V+V NALIDMY KCG LE VF+GMR+R V++W+SMI+G+ +H
Sbjct: 240 ESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRK 299
Query: 312 MIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAG 371
M+ SG++PN +TF+G+L CSH GLV +G E F IM + + P V+HYGC+VDL RAG
Sbjct: 300 MVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAG 359
Query: 372 RLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSN 431
+LE + E+I S + V+W LLG C++H+N++L E AM+ L +L+ N G YV+M++
Sbjct: 360 QLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTS 419
Query: 432 VYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEK 491
+Y+ A + + +R+ ++S ++ PG S I I VH+FV D+ HP++ I+ +
Sbjct: 420 IYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGE 479
Query: 492 LLVKMKMKGYIP-DTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLR 550
++ + + GY P D++ + D HSEKLA+ YGL+ T G +RI KNLR
Sbjct: 480 VINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLR 539
Query: 551 VCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
VC DCH+ K VS+ NREI+VRDR RFH F +G C+C DYW
Sbjct: 540 VCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 294/541 (54%), Gaps = 31/541 (5%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++V WN+ + + + + +FL +R FT S +L AC ++ D + + +H
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
K NL + LL LYA CG +
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGM-------------------------------IK 214
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
A +F+SM ++ +W+S+++G + EEAL ++ +R N+ T+ +V+ AC+
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
L L GK +H +GF NV+V ++ +DMY KCG L E +F ++E+ + W++
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
+I GFA H M + GM PN VTF +L C H GLV++GR FF +MR Y
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G+ P V HY C+VD+L RAG L EA E+I ++ P +WG+LL CR++KN++LAE A
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 454
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
L EL+P N G +V++SN+YA +WEE+++ R+ ++ VKK G S I I VH
Sbjct: 455 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHT 514
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALV 531
F G+ HP+ + I + L++K + GY P L D+E +KE L +HSEKLALV
Sbjct: 515 FSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALV 574
Query: 532 YGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDY 591
+GL+ P+RIMKNLR+C DCH +K S R I+VRD NRFH F +G C+C D+
Sbjct: 575 FGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDF 634
Query: 592 W 592
W
Sbjct: 635 W 635
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 160/338 (47%), Gaps = 11/338 (3%)
Query: 121 SNLILQNMLLHLYASCGETSHARLMFDKMP----QQDVATWNIMIGHLISAGDVGAARDL 176
SN L + +L L A G A+ K+ + DV N++I G V AR +
Sbjct: 59 SNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQV 118
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDL 236
FD M R++ SW ++I + M EAL +F EM EG + +E T+ +VL AC D
Sbjct: 119 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDA 178
Query: 237 EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGF 296
K +H + N+YV AL+D+Y KCG +++ +VF+ M++++ V+WSSM+ G+
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPG 356
+ R ++ N T V+ ACS++ + +G++ ++ + G
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSN 297
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH---KNIKLAEEAMR 413
V VD+ ++ G L E+ + + + N +W ++ G H K + + E M+
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 414 HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKS 451
+ P N+ + + +V G EE R + M++
Sbjct: 357 Q-DGMHP-NEVTFSSLLSVCGHTGLVEEGRRFFKLMRT 392
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/540 (37%), Positives = 299/540 (55%), Gaps = 32/540 (5%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WNS + + + G + + LF + + DH T L+ T +D+ G+ +H+
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
K G +L + N L+ +YA CGE VG +
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGE-------------------------------VGDS 462
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
+F SM + +W +VIS + G L+V ++M + P+ T + L CA L
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
GK IH G+ + + NALI+MY KCGCLE RVF+ M R VV+W+ MI
Sbjct: 523 AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMI 582
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
+ M+ M +SG+ P+ V FI +++ACSH GLVD+G F M+ Y I
Sbjct: 583 YAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKI 642
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
P +EHY C+VDLLSR+ ++ +A E I M + P+ +W ++L CR +++ AE R
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSR 702
Query: 414 HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFV 473
+ EL+P + GY ++ SN YA KW++VS IR+S+K + + K PG S I + VH F
Sbjct: 703 RIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFS 762
Query: 474 AGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDM-EDEQKEIFLYRHSEKLALVY 532
+GD++ PQ++ I++ E L M +GYIPD V ++ E+E+K + HSE+LA+ +
Sbjct: 763 SGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAF 822
Query: 533 GLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
GL+NT+PG P+++MKNLRVC DCH KL+S+I REI+VRD NRFH FK+G C+CKD W
Sbjct: 823 GLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 172/372 (46%), Gaps = 42/372 (11%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WNS ++ F++ G + + + +LR+ + PD +T ++KAC D G +++ +
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
+GF+S+L + N L+ +Y+ G + AR
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRAR-------------------------------Q 162
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
+FD MP R++ SW S+ISG + G EEAL ++ E++ P+ TV +VL A L
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
++ G+ +H FA +G V V N L+ MY+K + RVFD M R VS+++MI G
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG 282
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVP 355
+ + KP+ +T VL AC H+ + + + M + G V
Sbjct: 283 YLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVL 340
Query: 356 GVEHYGCLVDLLSRAGRLEEAREVIANM----SVPPNGVVWGALLGG-----CRLHKNIK 406
L+D+ ++ G + AR+V +M +V N ++ G + G +L K +
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 407 LAEEAMRHLSEL 418
+ EE H++ L
Sbjct: 401 IMEEQADHITYL 412
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 151/327 (46%), Gaps = 36/327 (11%)
Query: 71 DTISLFLR-LRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNML 129
+++ +FL L Q PD T S +L+AC D+ + I+ Y+ K GF ++N+L
Sbjct: 291 ESVRMFLENLDQFK--PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348
Query: 130 LHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWT 189
+ +YA CG D+ ARD+F+SM ++ SW
Sbjct: 349 IDVYAKCG-------------------------------DMITARDVFNSMECKDTVSWN 377
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
S+ISG + G EA+++F M + + +T + ++ +L DL+FGK +H +
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 250 GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 309
G ++ V NALIDMY KCG + + ++F M V+W+++I
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 310 XXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSR 369
M +S + P+ TF+ L C+ + G+E + R +G ++ L+++ S+
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSK 556
Query: 370 AGRLEEAREVIANMSVPPNGVVWGALL 396
G LE + V MS + V W ++
Sbjct: 557 CGCLENSSRVFERMS-RRDVVTWTGMI 582
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 34/350 (9%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
V +V WNS + ++ G + + ++ L+ I+PD FT S +L A + G+
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H + K G S +++ N L+ +Y + AR +FD+M +D ++N M
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTM--------- 279
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
I G K M EE++R+F E + +P+ +TV +VL A
Sbjct: 280 ----------------------ICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRA 316
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
C L DL K I+ + GF+ V N LID+Y KCG + VF+ M + VSW
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+S+I G+ M+ + +H+T++ ++ + + + G+ + +
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
GI + L+D+ ++ G + ++ ++ ++M + V W ++ C
Sbjct: 437 S-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 148/339 (43%), Gaps = 36/339 (10%)
Query: 93 FLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ 152
F+ +A + SS++ R IHA V LG S+ L+ Y+ E + + +F ++
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS-- 66
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME 212
P +NV W S+I +K G+ EAL + ++
Sbjct: 67 ----------------------------PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLR 98
Query: 213 REGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLE 272
P++ T +V+ ACA L D E G ++ GF +++V NAL+DMY + G L
Sbjct: 99 ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLT 158
Query: 273 EGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
+VFD M R +VSW+S+I G++ H + S + P+ T VL A
Sbjct: 159 RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG 218
Query: 333 HVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVW 392
++ +V +G+ + G+ V LV + + R +AR V M V + V +
Sbjct: 219 NLLVVKQGQGLHGFALK-SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV-RDSVSY 276
Query: 393 GALLGGCRLHKNIKLAEEAMR-HLSELDPLNDGYYVVMS 430
++ G + +++ EE++R L LD V S
Sbjct: 277 NTMICG---YLKLEMVEESVRMFLENLDQFKPDLLTVSS 312
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/547 (35%), Positives = 308/547 (56%), Gaps = 36/547 (6%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P +NS +K ++ P ++ + R+ ++ P ++T + ++K+C S + G+
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H + GF + +Q L+ Y+ CG D
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCG-------------------------------D 157
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+ AR +FD MP +++ +W S++SG + G+++EA++VF +M G P+ T V++L A
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
CAQ G + G +H++ G NV + ALI++Y +CG + + VFD M+E V +W
Sbjct: 218 CAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAW 277
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRS-GMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
++MI + H M G PN+VTF+ VL AC+H GLV++GR + M
Sbjct: 278 TAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMT 337
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGV---VWGALLGGCRLHKNI 405
+ Y ++PGVEH+ C+VD+L RAG L+EA + I + +W A+LG C++H+N
Sbjct: 338 KSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNY 397
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
L E + L L+P N G++V++SN+YA +GK +EVS IR M ++K G S I +
Sbjct: 398 DLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEV 457
Query: 466 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHS 525
+ + F GDE+H + I+ E L+ + K GY P + V+ +E+E+KE L HS
Sbjct: 458 ENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHS 517
Query: 526 EKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGA 585
EKLA+ +GL+ T + I I+KNLR+CEDCH+A K +S + NR+I VRD+ RFH F+NG+
Sbjct: 518 EKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGS 576
Query: 586 CTCKDYW 592
C+C DYW
Sbjct: 577 CSCLDYW 583
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 138/296 (46%), Gaps = 5/296 (1%)
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
SA + LF S+P + + SVI +K + + + M P+ T +
Sbjct: 53 SARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTS 112
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
V+ +CA L L GK +H A +GF + YV AL+ Y KCG +E +VFD M E++
Sbjct: 113 VIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKS 172
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
+V+W+S++ GF + M SG +P+ TF+ +L AC+ G V G
Sbjct: 173 IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQ 232
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
+ + G+ V+ L++L SR G + +AREV M N W A++ H
Sbjct: 233 YIISE-GLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYG 290
Query: 406 KLAEEAMRHL-SELDPL-NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPG 459
+ A E + + P+ N+ +V + + A AG EE + + M ++ + PG
Sbjct: 291 QQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM-TKSYRLIPG 345
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/541 (37%), Positives = 295/541 (54%), Gaps = 32/541 (5%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+VPW+ + F + G + + LF+R+R+ ++P+ FT S +L C I G +H
Sbjct: 313 VVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHG 372
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V K+GF ++ + N L+ +YA C +KM
Sbjct: 373 LVVKVGFDLDIYVSNALIDVYAKC----------EKMD---------------------T 401
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A LF + +N SW +VI G G +A +F E R EVT + L ACA
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L ++ G +H A + V V N+LIDMY KCG ++ VF+ M V SW+++
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G++ H M KPN +TF+GVL CS+ GL+D+G+E F M RD+G
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
I P +EHY C+V LL R+G+L++A ++I + P+ ++W A+L N + A +
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSA 641
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
+ +++P ++ YV++SN+YA A +W V+ IR+SMK GVKK PG S I G VH F
Sbjct: 642 EEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYF 701
Query: 473 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVY 532
G HP K I M E L +K GY+PD + VLLDM+DE+K+ L+ HSE+LAL Y
Sbjct: 702 SVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAY 761
Query: 533 GLINTKPGMP-IRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDY 591
GL+ I IMKNLR+C DCH+A+K++S I R++V+RD NRFH F G C+C D+
Sbjct: 762 GLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDH 821
Query: 592 W 592
W
Sbjct: 822 W 822
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 36/335 (10%)
Query: 66 RGAPC-DTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNL 123
+G C D I L+ RL R+ L H SFL ++ + +H+ + KLG+ SN
Sbjct: 123 QGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC-PWLHSPIVKLGYDSNA 181
Query: 124 ILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRR 183
+ L++ Y+ CG V +AR +F+ + +
Sbjct: 182 FVGAALINAYSVCGS-------------------------------VDSARTVFEGILCK 210
Query: 184 NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIH 243
++ W ++S + G E++L++ S M G PN T L A LG +F K +H
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270
Query: 244 RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXX 303
++ + V L+ +Y + G + + +VF+ M + VV WS MI F +
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 304 XXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCL 363
M + + PN T +L+ C+ G + ++ + G + L
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK-VGFDLDIYVSNAL 389
Query: 364 VDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+D+ ++ +++ A ++ A +S N V W ++ G
Sbjct: 390 IDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVIVG 423
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 129/319 (40%), Gaps = 43/319 (13%)
Query: 83 SILP--DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETS 140
SI+P D +L+ C +D ++ + IH + K G +L N+LL+ Y G
Sbjct: 42 SIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDK 101
Query: 141 HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGM 200
A +FD+MP+ RN S+ ++ G A
Sbjct: 102 DALNLFDEMPE-------------------------------RNNVSFVTLAQGYA---- 126
Query: 201 SEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNA 260
++ + ++S + REG N + L L E +H G+ N +V A
Sbjct: 127 CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 261 LIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPN 320
LI+ Y CG ++ VF+G+ + +V W+ ++ + + M +G PN
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246
Query: 321 HVTFIGVLHACSHVGLVDKGREFF-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
+ TF L A +G D + I++ Y + P V L+ L ++ G + +A +V
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV--GLLQLYTQLGDMSDAFKV 304
Query: 380 IANMSVPPNGVV-WGALLG 397
M P N VV W ++
Sbjct: 305 FNEM--PKNDVVPWSFMIA 321
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 297/541 (54%), Gaps = 32/541 (5%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
V +N + +++ ++ F ++ + +F + +L S + GR +H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
S L + N L+ +YA C MF++
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCE-------MFEE------------------------ 404
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A +F S+P+R SWT++ISG + G+ L++F++M R ++ T VL A A
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L GK +H F +G L NV+ + L+DMY KCG +++ +VF+ M +R VSW+++
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I A + MI SG++P+ V+ +GVL ACSH G V++G E+F M YG
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYG 584
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
I P +HY C++DLL R GR EA +++ M P+ ++W ++L CR+HKN LAE A
Sbjct: 585 ITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAA 644
Query: 413 RHLSELDPLND-GYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
L ++ L D YV MSN+YA AG+WE+V ++++M+ RG+KK P S + ++ +H
Sbjct: 645 EKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHV 704
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALV 531
F + D+THP I +L +++ +GY PDTS V+ D++++ K L HSE+LA+
Sbjct: 705 FSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVA 764
Query: 532 YGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDY 591
+ LI+T G PI +MKNLR C DCH A+KL+S+I REI VRD +RFH F G C+C DY
Sbjct: 765 FALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDY 824
Query: 592 W 592
W
Sbjct: 825 W 825
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 161/375 (42%), Gaps = 46/375 (12%)
Query: 34 LLIKTNAPLSHVDLA-----HVPA--IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILP 86
+L+K+ + +DLA +P V +N+ + + + G ++I LFL++RQ P
Sbjct: 189 VLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQP 248
Query: 87 DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMF 146
FT S +LKA D G+ +HA GF + + N +L Y + H R++
Sbjct: 249 SDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY-----SKHDRVLE 303
Query: 147 DKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALR 206
+M LFD MP + S+ VIS ++ E +L
Sbjct: 304 TRM--------------------------LFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 207 VFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIH---RFAEGNGFLRNVYVCNALID 263
F EM+ G +L A L L+ G+ +H A + L +V N+L+D
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL---HVGNSLVD 394
Query: 264 MYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVT 323
MY KC EE +F + +RT VSW+++I G+ M S ++ + T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 324 FIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 383
F VL A + + G++ + R G + V LVD+ ++ G +++A +V M
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM 513
Query: 384 SVPPNGVVWGALLGG 398
N V W AL+
Sbjct: 514 P-DRNAVSWNALISA 527
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 6/235 (2%)
Query: 108 RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA 167
R + A + K GF ++ N ++ G+ S AR ++D+MP ++ + N MI +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS--RPNEVTVVA 225
GDV +ARDLFD+MP R V +WT ++ A+ +EA ++F +M R S P+ VT
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVY--VCNALIDMYVKCGCLEEGCRVFDGMRE 283
+L C +H FA GF N + V N L+ Y + L+ C +F+ + E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 284 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
+ V+++++I G+ M +SG +P+ TF GVL A VGL D
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHD 265
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 148/352 (42%), Gaps = 41/352 (11%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLS--ILPDHFTCSFLLKACTISSDIVTGRII 110
+V W + ++A + LF ++ + S LPDH T + LL C + +
Sbjct: 110 VVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQV 169
Query: 111 HAYVQKLGFQSN--LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
HA+ KLGF +N L + N+LL Y A ++F+++P++D T
Sbjct: 170 HAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT------------ 217
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
+ ++I+G K G+ E++ +F +M + G +P++ T VL
Sbjct: 218 -------------------FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
A L D G+ +H + GF R+ V N ++D Y K + E +FD M E VS
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
++ +I ++ M G + F +L +++ + GR+ +
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC--Q 376
Query: 349 RDYGIVPGVEHYG-CLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGG 398
+ H G LVD+ ++ EEA + S+P V W AL+ G
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFK--SLPQRTTVSWTALISG 426
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/571 (34%), Positives = 311/571 (54%), Gaps = 35/571 (6%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQK 116
N+ ++ E ++ F+ + +L + PD T F+LK+ + GR +HA K
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 117 LGFQSNLILQNMLLHLYASCGETSHARLMFDK---------------------------- 148
+ ++ L+ +YA G+ HA +F++
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHM 214
Query: 149 -------MPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMS 201
MP+++ +W+ +I + +G++ A+ LF+ MP +NV SWT++I+G ++ G
Sbjct: 215 ATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDY 274
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
E A+ + EM +G +PNE T+ AVL AC++ G L G IH + NG + + AL
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTAL 334
Query: 262 IDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
+DMY KCG L+ VF M + ++SW++MI G+A+H M+ SG KP+
Sbjct: 335 VDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDE 394
Query: 322 VTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 381
V F+ VL AC + VD G FF MR DY I P ++HY +VDLL RAG+L EA E++
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVE 454
Query: 382 NMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEE 441
NM + P+ W AL C+ HK + AE ++L ELDP G Y+ + +A G ++
Sbjct: 455 NMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQD 514
Query: 442 VSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 501
V + R S++ R +++ G S I +DG +++F AGD +H + I ++++ KGY
Sbjct: 515 VEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGY 574
Query: 502 IPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKL 561
P + D+E+E+KE HSEKLAL G + T PG IRI+KNLR+C DCH+ +K
Sbjct: 575 NPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKY 634
Query: 562 VSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
VS+I R+I++RD +FH FK+G C+C DYW
Sbjct: 635 VSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W + + F++ G IS + + + + P+ +T + +L AC+ S + +G IH
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHG 317
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y+ G + + + L+ +YA CGE A +F M +D+
Sbjct: 318 YILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL----------------- 360
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
SWT++I G A G +A++ F +M G +P+EV +AVL AC
Sbjct: 361 --------------SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLN 406
Query: 233 LGDLEFG 239
+++ G
Sbjct: 407 SSEVDLG 413
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 125/286 (43%), Gaps = 23/286 (8%)
Query: 126 QNMLLHLYASCGETS-----HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSM 180
++ + L +C +T+ HA+++ + VA + L+ + D + +F +
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLS--IFRNS 86
Query: 181 PRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGK 240
RN ++I GL + E ++R F M R G +P+ +T VL + ++LG G+
Sbjct: 87 EERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGR 146
Query: 241 SIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVF----DGMRERTVVSWSSMIVGF 296
++H N + +V +L+DMY K G L+ +VF D +++ +++ W+ +I G+
Sbjct: 147 ALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGY 206
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPG 356
+ RS + N ++ ++ G +++ ++ F +M
Sbjct: 207 C----RAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE-----KN 257
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGC 399
V + L++ S+ G E A M + PN A+L C
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/538 (37%), Positives = 303/538 (56%), Gaps = 32/538 (5%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
W + ++ G+P D + +++ + I P +F+ S LKAC D+ GR IHA +
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K + + ++ N+LL LY G +FD AR
Sbjct: 264 KRKEKVDQVVYNVLLKLYMESG-------LFDD------------------------ARK 292
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
+FD M RNV +W S+IS L+K E +F +M+ E + T+ +L AC+++
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
L GK IH + +V + N+L+DMY KCG +E RVFD M + + SW+ M+
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVP 355
+A++ MI SG+ P+ +TF+ +L CS GL + G F M+ ++ + P
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 356 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHL 415
+EHY CLVD+L RAG+++EA +VI M P+ +WG+LL CRLH N+ + E A + L
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 416 SELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAG 475
L+P N G YV++SN+YA+A W+ V +IR MK RGVKK GCS + + + FVAG
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Query: 476 DETHPQAKGIF-EMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGL 534
+ + ++W +L ++ GY P+TSVVL D+++E K ++ HSE+LA Y L
Sbjct: 593 GGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSL 652
Query: 535 INTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
I+T G+PIRI KNLRVC DCH+ +K+VS++ R IV+RD RFH F +G C+CKDYW
Sbjct: 653 IHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WNS + +++ + +LF ++++ I T + +L AC+ + ++TG+ IHA
Sbjct: 302 VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHA 361
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K + ++ L N L+ +Y CGE ++R +FD M +D+A+WNIM+ G++
Sbjct: 362 QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNI-- 419
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
EE + +F M G P+ +T VA+L C+
Sbjct: 420 -----------------------------EEVINLFEWMIESGVAPDGITFVALLSGCSD 450
Query: 233 LGDLEFGKSIHRFAEGNGFLRNV---YVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS- 288
G E+G S+ + + Y C L+D+ + G ++E +V + M + S
Sbjct: 451 TGLTEYGLSLFERMKTEFRVSPALEHYAC--LVDILGRAGKIKEAVKVIETMPFKPSASI 508
Query: 289 WSSMIVGFAMH 299
W S++ +H
Sbjct: 509 WGSLLNSCRLH 519
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/431 (40%), Positives = 271/431 (62%), Gaps = 1/431 (0%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSI-LPDHFTCSFLLKACTISSDIVTGRI 109
P + +NS ++ + CD I ++ +L + S LPD FT F+ K+C G+
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H ++ K G + +++ +N L+ +Y + A +FD+M ++DV +WN ++ G
Sbjct: 131 VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQ 190
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+ A+ LF M + + SWT++ISG G EA+ F EM+ G P+E+++++VL +
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
CAQLG LE GK IH +AE GFL+ VCNALI+MY KCG + + ++F M + V+SW
Sbjct: 251 CAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
S+MI G+A H M R+ +KPN +TF+G+L ACSHVG+ +G +F +MR+
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
DY I P +EHYGCL+D+L+RAG+LE A E+ M + P+ +WG+LL CR N+ +A
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
AM HL EL+P + G YV+++N+YA+ GKWE+VSR+R+ +++ +KKTPG S I ++ +V
Sbjct: 431 VAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIV 490
Query: 470 HEFVAGDETHP 480
EFV+GD + P
Sbjct: 491 QEFVSGDNSKP 501
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 146/363 (40%), Gaps = 77/363 (21%)
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR-PNEVTVVAVL 227
D+ A LF+ + NV + S+I + + +R++ ++ R+ P+ T +
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
+CA LG GK +H G +V NALIDMY+K L + +VFD M ER V+
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 288 SWSSMIVGFA-----------MHXXXXXXXXXXXXMIR--------------------SG 316
SW+S++ G+A H MI +G
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 376
++P+ ++ I VL +C+ +G ++ G+ R G + L+++ S+ G + +A
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERR-GFLKQTGVCNALIEMYSKCGVISQA 295
Query: 377 REVIANMS----------------------------------VPPNGVVWGALLGGCRLH 402
++ M V PNG+ + LL C
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSAC--- 352
Query: 403 KNIKLAEEAMRHLS------ELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKK 456
++ + +E +R+ +++P + +Y + +V A AGK E I ++M + K
Sbjct: 353 SHVGMWQEGLRYFDMMRQDYQIEPKIE-HYGCLIDVLARAGKLERAVEITKTMPMKPDSK 411
Query: 457 TPG 459
G
Sbjct: 412 IWG 414
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 297/533 (55%), Gaps = 32/533 (6%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVT-GRIIH 111
+V WN+ + +AE P ++ F +R + ++ T +L AC + D++ G+ +H
Sbjct: 411 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLH 470
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
AY+ GF+S+ ++N L+ +YA CG D+
Sbjct: 471 AYIVSAGFESDEHVKNSLITMYAKCG-------------------------------DLS 499
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+++DLF+ + RN+ +W ++++ A G EE L++ S+M G ++ + L A A
Sbjct: 500 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 559
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+L LE G+ +H A GF + ++ NA DMY KCG + E ++ R++ SW+
Sbjct: 560 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 619
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
+I H M+ G+KP HVTF+ +L ACSH GLVDKG ++ ++ RD+
Sbjct: 620 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDF 679
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G+ P +EH C++DLL R+GRL EA I+ M + PN +VW +LL C++H N+ +A
Sbjct: 680 GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKA 739
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
+LS+L+P +D YV+ SN++A G+WE+V +R+ M + +KK CS + + V
Sbjct: 740 AENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 799
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALV 531
F GD THPQ I+ E + +K GY+ DTS L D ++EQKE L+ HSE+LAL
Sbjct: 800 FGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALA 859
Query: 532 YGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNG 584
Y L++T G +RI KNLR+C DCH+ K VS + R IV+RD+ RFH F+ G
Sbjct: 860 YALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 154/351 (43%), Gaps = 44/351 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ WNS + F G D + L + ++ T + L AC GRI+H
Sbjct: 310 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 369
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V G N I+ N L+ +Y GE S +R + +MP++DV WN +IG
Sbjct: 370 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG---------- 419
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
G A+ ++AL F M EG N +TVV+VL AC
Sbjct: 420 ---------------------GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 458
Query: 233 LGD-LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
GD LE GK +H + GF + +V N+LI MY KCG L +F+G+ R +++W++
Sbjct: 459 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 518
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
M+ A H M G+ + +F L A + + ++++G++ +
Sbjct: 519 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL----- 573
Query: 352 GIVPGVEH----YGCLVDLLSRAGRLEEAREVI---ANMSVPPNGVVWGAL 395
+ G EH + D+ S+ G + E +++ N S+P ++ AL
Sbjct: 574 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 624
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 152/351 (43%), Gaps = 43/351 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W S + ++++G P + I ++ +R + + + S ++ +C + D GR I
Sbjct: 108 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 167
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V K G +S L ++N L+ + L S G+V
Sbjct: 168 QVVKSGLESKLAVENSLISM-------------------------------LGSMGNVDY 196
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A +FD M R+ SW S+ + A+ G EE+ R+FS M R N TV +L
Sbjct: 197 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 256
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ ++G+ IH GF V VCN L+ MY G E VF M + ++SW+S+
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
+ F MI SG N+VTF L AC +KGR ++
Sbjct: 317 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV----- 371
Query: 353 IVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGG 398
+V G+ + LV + + G + E+R V+ M P VV W AL+GG
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM--PRRDVVAWNALIGG 420
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 156/370 (42%), Gaps = 45/370 (12%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+ WNS +A+ G ++ +F +R+ + T S LL GR IH
Sbjct: 210 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
V K+GF S + + N LL +YA G + A L+F +M
Sbjct: 270 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM------------------------ 305
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
P +++ SW S+++ G S +AL + M G N VT + L AC
Sbjct: 306 -------PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
E G+ +H +G N + NAL+ MY K G + E RV M R VV+W+++I
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 418
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG-LVDKGREFFTIMRRDYG 352
G+A M G+ N++T + VL AC G L+++G+ Y
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA-----YI 473
Query: 353 IVPGVEH----YGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
+ G E L+ + ++ G L ++++ + N + W A+L H +
Sbjct: 474 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH---G 529
Query: 409 EEAMRHLSEL 418
EE ++ +S++
Sbjct: 530 EEVLKLVSKM 539
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 142/349 (40%), Gaps = 44/349 (12%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV-TGRIIHA 112
V WN+ + G + + F ++ L I P F + L+ AC S + G +H
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+V K G S++ + +LHLY G S
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVS-------------------------------C 95
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
+R +F+ MP RNV SWTS++ G + G EE + ++ M EG NE ++ V+ +C
Sbjct: 96 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL 155
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L D G+ I +G + V N+LI M G ++ +FD M ER +SW+S+
Sbjct: 156 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 215
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
+A + M R + N T +L HV GR ++
Sbjct: 216 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV----- 270
Query: 353 IVPGVEHYGCLVDLLSR----AGRLEEAREVIANMSVPPNGVV-WGALL 396
+ G + C+ + L R AGR EA V M P ++ W +L+
Sbjct: 271 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM--PTKDLISWNSLM 317
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Query: 180 MPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDL-EF 238
MP RN SW +++SG+ + G+ E + F +M G +P+ + +++ AC + G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 239 GKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAM 298
G +H F +G L +VYV A++ +Y G + +VF+ M +R VVSW+S++VG++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 299 HXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVE 358
M G+ N + V+ +C + GR+ + + G+ +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLA 179
Query: 359 HYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
L+ +L G ++ A + MS + + W ++ + +I EE+ R S +
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHI---EESFRIFSLM 235
Query: 419 DPLND 423
+D
Sbjct: 236 RRFHD 240
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/546 (36%), Positives = 295/546 (54%), Gaps = 37/546 (6%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WNS + + + ++L+ + D FT + +L A T ++ GR H
Sbjct: 206 VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGK 265
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETS---HARLMFDKMPQQDVATWNIMIGHLISAGDV 170
+ K GF N + + L+ Y+ CG + +F ++ D+ WN MI
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGY------ 319
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
SM +SEEA++ F +M+R G RP++ + V V AC
Sbjct: 320 --------SMNEE----------------LSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRN-VYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
+ L K IH A + N + V NALI +Y K G L++ VFD M E VS+
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+ MI G+A H M+ SG+ PN +TF+ VL AC+H G VD+G+E+F M+
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
+ I P EHY C++DLL RAG+LEEA I M P V W ALLG CR HKN+ LAE
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAE 535
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
A L + PL YV+++N+YA+A KWEE++ +R+SM+ + ++K PGCS I +
Sbjct: 536 RAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKK 595
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYR---HSE 526
H FVA D +HP + + E E+++ KMK GY+ D ++ ++ + R HSE
Sbjct: 596 HVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSE 655
Query: 527 KLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGAC 586
KLA+ +GL++T+ G + ++KNLR+C DCH A+K +S + REI+VRD RFHCFK+G C
Sbjct: 656 KLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKC 715
Query: 587 TCKDYW 592
+C DYW
Sbjct: 716 SCGDYW 721
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 18/333 (5%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
LL D+ TG+ +HA K S+ L N ++LY+ CG S+AR F + +
Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
V ++N+++ + AR LFD +P+ + S+ ++ISG A + A+ +F M +
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
G + T+ ++ AC DL K +H F+ GF V NA + Y K G L E
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 274 GCRVFDGMRE-RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
VF GM E R VSW+SMIV + H MI G K + T VL+A +
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 333 HVGLVDKGREFFTIMRRDYGIVPGV---EHYGC-LVDLLSRAG---RLEEAREVIANMSV 385
+ + GR+F + I G H G L+D S+ G + ++ +V + +
Sbjct: 252 SLDHLIGGRQFHGKL-----IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-L 305
Query: 386 PPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
P+ VVW ++ G + N +L+EEA++ ++
Sbjct: 306 SPDLVVWNTMISGYSM--NEELSEEAVKSFRQM 336
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 39/249 (15%)
Query: 51 PAIVPWNSCLKFFA-ERGAPCDTISLFLRLRQLSILPDHFTCSFL--LKACTISSDIVTG 107
P +V WN+ + ++ + + F +++++ PD CSF+ AC+ S
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPD--DCSFVCVTSACSNLSSPSQC 364
Query: 108 RIIHAYVQKLGFQSNLI-LQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
+ IH K SN I + N L+ LY G AR +FD+MP+ + ++N M
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM------ 418
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
I G A+ G EAL ++ M G PN++T VAV
Sbjct: 419 -------------------------IKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAV 453
Query: 227 LVACAQLGDLEFGKS-IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
L ACA G ++ G+ + E + +ID+ + G LEE R D M +
Sbjct: 454 LSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKP 513
Query: 286 -VVSWSSMI 293
V+W++++
Sbjct: 514 GSVAWAALL 522
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/543 (37%), Positives = 294/543 (54%), Gaps = 38/543 (6%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDH--FTCSFLLKACTISSDIVTGRII 110
++ W + + + + + LF + + I FTC ++ AC + G +
Sbjct: 190 VISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC--VITACANAPAFHMGIQV 247
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H + KLGF + L+ YA+C +
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKR-------------------------------I 276
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
G +R +FD V WT+++SG + E+AL +FS M R PN+ T + L +C
Sbjct: 277 GDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSC 336
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+ LG L++GK +H A G + +V N+L+ MY G + + VF + ++++VSW+
Sbjct: 337 SALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN 396
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S+IVG A H MIR +P+ +TF G+L ACSH G ++KGR+ F M
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSG 456
Query: 351 YG-IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
I ++HY C+VD+L R G+L+EA E+I M V PN +VW ALL CR+H ++ E
Sbjct: 457 INHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGE 516
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
+A + LD + YV++SN+YA AG+W VS++R MK G+ K PG S + I G
Sbjct: 517 KAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKK 576
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLA 529
HEF +GD+ P I+E E L K+K GY PD L D+EDEQKE L+ HSE+LA
Sbjct: 577 HEFFSGDQ--PHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLA 634
Query: 530 LVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCK 589
+ +GLINT G + +MKNLRVCEDCHT +KL+S + REIV+RD RFH FKNG C+C
Sbjct: 635 IAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCG 694
Query: 590 DYW 592
DYW
Sbjct: 695 DYW 697
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 137 GETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLA 196
G+ A +F +MP +D A WN M+ + G V A LF MP +NV SWT++I GL
Sbjct: 142 GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 197 KCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVY 256
+ S EAL +F M R + V+ ACA G +H GFL Y
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 257 VCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG 316
V +LI Y C + + +VFD V W++++ G++++ M+R+
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 376
+ PN TF L++CS +G +D G+E + + G+ LV + S +G + +A
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK-LGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 377 REVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
V + + V W +++ GC H K A
Sbjct: 381 VSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWA 411
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 146/311 (46%), Gaps = 15/311 (4%)
Query: 93 FLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ 152
F +A +IS ++ G+ ++ + FQ+ +L + HL + AR +F+++P
Sbjct: 10 FRFRAFSIS-HVIHGKCYRSFSVTVEFQNREVL--ICNHLLSR--RIDEAREVFNQVPSP 64
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME 212
V+ + MI + + A +LFD MP R+V SW S+ISG +CG A+++F EM
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 213 REGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLE 272
+ V+ A++ C + G ++ + + +++ N+++ Y++ G ++
Sbjct: 125 ER----SVVSWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFGKVD 176
Query: 273 EGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
+ ++F M + V+SW++MI G + M+R +K F V+ AC+
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 333 HVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVW 392
+ G + ++ + G + L+ + R+ ++R+V + V VW
Sbjct: 237 NAPAFHMGIQVHGLIIK-LGFLYEEYVSASLITFYANCKRIGDSRKVF-DEKVHEQVAVW 294
Query: 393 GALLGGCRLHK 403
ALL G L+K
Sbjct: 295 TALLSGYSLNK 305
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/456 (42%), Positives = 269/456 (58%), Gaps = 4/456 (0%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACT--ISSDIVTGRIIH 111
V W S + G + F + + P+H T LL C S G ++H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 112 AYVQKLGFQSN-LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
Y KLG N +++ ++ +Y+ G ARL+FD M ++ TWN MI + +G V
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
A +FD MP R++ SWT++I+G K G EEAL F EM+ G +P+ V ++A L AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
LG L FG +HR+ F NV V N+LID+Y +CGC+E +VF M +RTVVSW+
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S+IVGFA + M G KP+ VTF G L ACSHVGLV++G +F IM+ D
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH-KNIKLAE 409
Y I P +EHYGCLVDL SRAGRLE+A +++ +M + PN VV G+LL C H NI LAE
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
M+HL++L+ + YV++SN+YA GKWE S++RR MK G+KK PG SSI ID +
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 505
H F+AGD H + I E+ E + ++++G + +T
Sbjct: 457 HVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ W + + F ++G + + F ++ + PD+ L ACT + G +H
Sbjct: 171 LISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHR 230
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
YV F++N+ + N L+ LY CG AR +F M ++ V +WN
Sbjct: 231 YVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN-------------- 276
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
SVI G A G + E+L F +M+ +G +P+ VT L AC+
Sbjct: 277 -----------------SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSH 319
Query: 233 LGDLEFGKSIHRFAEGNGFLR---NVYVCNALIDMYVKCGCLEEGCRVFDGM 281
+G +E G + + + + Y C L+D+Y + G LE+ ++ M
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHYGC--LVDLYSRAGRLEDALKLVQSM 369
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/452 (40%), Positives = 267/452 (59%), Gaps = 7/452 (1%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WNS + F + G + + +F + + + PD T + ++ AC S I G+ +H
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 113 YVQKLG-FQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
V K ++++IL N + +YA C AR +FD MP ++V MI A
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
AAR +F M RNV SW ++I+G + G +EEAL +F ++RE P + +L ACA
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 232 QLGDLEFGKSIHRFAEGNGFL------RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
L +L G H +GF +++V N+LIDMYVKCGC+EEG VF M ER
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
VSW++MI+GFA + M+ SG KP+H+T IGVL AC H G V++GR +F+
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
M RD+G+ P +HY C+VDLL RAG LEEA+ +I M + P+ V+WG+LL C++H+NI
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
L + L E++P N G YV++SN+YAE GKWE+V +R+SM+ GV K PGCS I I
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 466 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMK 497
G H F+ D++HP+ K I + + L+ +M+
Sbjct: 638 QGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 182/344 (52%), Gaps = 3/344 (0%)
Query: 76 FLRLR-QLSILPDHFTCSFLLKACTISS-DIVTGRIIHAYVQKLGFQSNLILQNMLLHLY 133
FL+L LS D + LL +C S + R +HA V K GF + + +QN L+ Y
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY 65
Query: 134 ASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVIS 193
+ CG R +FDKMPQ+++ TWN ++ L G + A LF SMP R+ +W S++S
Sbjct: 66 SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVS 125
Query: 194 GLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLR 253
G A+ EEAL F+ M +EG NE + +VL AC+ L D+ G +H + FL
Sbjct: 126 GFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS 185
Query: 254 NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 313
+VY+ +AL+DMY KCG + + RVFD M +R VVSW+S+I F + M+
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 314 RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 373
S ++P+ VT V+ AC+ + + G+E + ++ + + VD+ ++ R+
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 374 EEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSE 417
+EAR + +M + N + +++ G + + K A ++E
Sbjct: 306 KEARFIFDSMPI-RNVIAETSMISGYAMAASTKAARLMFTKMAE 348
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 165/380 (43%), Gaps = 69/380 (18%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WNS + FA+ + + F + + + + ++ + +L AC+ +D+ G +H+ +
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K F S++ + + L+ +Y+ CG + A+ +FD+M ++V +WN
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN----------------- 222
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
S+I+ + G + EAL VF M P+EVT+ +V+ ACA L
Sbjct: 223 --------------SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 236 LEFGKSIHRFAEGNGFLRN-VYVCNALIDMYVKCGCLEEGCRVFDG-------------- 280
++ G+ +H N LRN + + NA +DMY KC ++E +FD
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 281 -----------------MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVT 323
M ER VVSW+++I G+ + + R + P H +
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 324 FIGVLHACSHVGLVDKGREFFT-IMRRDYGIVPGVEHY----GCLVDLLSRAGRLEEARE 378
F +L AC+ + + G + +++ + G E L+D+ + G +EE
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 379 VIANMSVPPNGVVWGALLGG 398
V M + + V W A++ G
Sbjct: 449 VFRKM-MERDCVSWNAMIIG 467
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 303/542 (55%), Gaps = 32/542 (5%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+ WN+ + A+ P ++ L+++ +LPD FT LL AC+ + G+ +H
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 519
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
++ + + +L + +L LY CGE +
Sbjct: 520 GFIIRNWLERDLFVYLSVLSLYIHCGE-------------------------------LC 548
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+ LFD+M +++ SW +VI+G + G + AL VF +M G + ++++ V AC+
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
L L G+ H +A + + ++ +LIDMY K G + + +VF+G++E++ SW++
Sbjct: 609 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 668
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI+G+ +H M R+G P+ +TF+GVL AC+H GL+ +G + M+ +
Sbjct: 669 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF 728
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIAN-MSVPPNGVVWGALLGGCRLHKNIKLAEE 410
G+ P ++HY C++D+L RAG+L++A V+A MS + +W +LL CR+H+N+++ E+
Sbjct: 729 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 788
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
L EL+P YV++SN+YA GKWE+V ++R+ M ++K GCS I ++ V
Sbjct: 789 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVF 848
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLAL 530
FV G+ + I +W L +K+ GY PDT V D+ +E+K L HSEKLAL
Sbjct: 849 SFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLAL 908
Query: 531 VYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKD 590
YGLI T G IR+ KNLR+C DCH A KL+S++ REIVVRD RFH FKNG C+C D
Sbjct: 909 TYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGD 968
Query: 591 YW 592
YW
Sbjct: 969 YW 970
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 164/384 (42%), Gaps = 44/384 (11%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+ WN+ + ++ + + F+ + +LPDHFT ++KAC SD+ G +H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
V K G ++ + N L+ Y + G V
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGT-------------------------------HGFVT 239
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR----PNEVTVVAVL 227
A LFD MP RN+ SW S+I + G SEE+ + EM E P+ T+V VL
Sbjct: 240 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 299
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
CA+ ++ GK +H +A + + + NAL+DMY KCGC+ +F + VV
Sbjct: 300 PVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVV 359
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSG--MKPNHVTFIGVLHACSHVGLVDKGREFFT 345
SW++M+ GF+ M+ G +K + VT + + C H + +E
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 346 I-MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM-SVPPNGVVWGALLGGCRLHK 403
+++++ V + V ++ G L A+ V + S N W AL+GG
Sbjct: 420 YSLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFHGIRSKTVNS--WNALIGGHAQSN 475
Query: 404 NIKLAEEAMRHLSELDPLNDGYYV 427
+ +L+ +A + L D + V
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTV 499
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 164/372 (44%), Gaps = 46/372 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQL-----SILPDHFTCSFLLKACTISSDIVTG 107
+V WN+ + F+ G DT F LRQ+ + D T + C S + +
Sbjct: 358 VVSWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414
Query: 108 RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA 167
+ +H Y K F N ++ N + YA CG S+A+
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ------------------------ 450
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
+F + + V SW ++I G A+ +L +M+ G P+ TV ++L
Sbjct: 451 -------RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
AC++L L GK +H F N R+++V +++ +Y+ CG L +FD M ++++V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
SW+++I G+ + M+ G++ ++ + V ACS + + GRE
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 348 RRDYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK 406
+ ++ C L+D+ ++ G + ++ +V + + W A++ G +H
Sbjct: 624 LKH--LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIH---G 677
Query: 407 LAEEAMRHLSEL 418
LA+EA++ E+
Sbjct: 678 LAKEAIKLFEEM 689
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 134/315 (42%), Gaps = 45/315 (14%)
Query: 93 FLLKACTISSDIVTGRIIHAYVQ-KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQ 151
LL+A DI GR IH V +++ +L ++ +YA CG +R
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF------- 141
Query: 152 QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM 211
+FD++ +N+ W +VIS ++ + +E L F EM
Sbjct: 142 ------------------------VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 177
Query: 212 -EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGC 270
P+ T V+ ACA + D+ G ++H G + +V+V NAL+ Y G
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 271 LEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRS----GMKPNHVTFIG 326
+ + ++FD M ER +VSW+SMI F+ + M+ P+ T +
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 327 VLHACS---HVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 383
VL C+ +GL + +R D +V L+D+ S+ G + A ++I M
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLN----NALMDMYSKCGCITNA-QMIFKM 352
Query: 384 SVPPNGVVWGALLGG 398
+ N V W ++GG
Sbjct: 353 NNNKNVVSWNTMVGG 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 14/245 (5%)
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA------VLVACAQLGDLEFGKSIHRF 245
IS + G +++ R E + ++ ++ +L A + D+E G+ IH+
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 246 AEGNGFLRNVYV-CNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXX 304
G+ LRN V C +I MY CG ++ VFD +R + + W+++I ++ +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 305 XXXXXXXMIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCL 363
MI + + P+H T+ V+ AC+ + V G ++ + G+V V L
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVEDVFVGNAL 228
Query: 364 VDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLN- 422
V G + +A ++ M N V W +++ R+ + +EE+ L E+ N
Sbjct: 229 VSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI---RVFSDNGFSEESFLLLGEMMEENG 284
Query: 423 DGYYV 427
DG ++
Sbjct: 285 DGAFM 289
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/530 (37%), Positives = 297/530 (56%), Gaps = 32/530 (6%)
Query: 63 FAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSN 122
FA+ P ++ ++ ++ PD K+C I S GR +H K G+ ++
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 123 LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPR 182
+ + + L+ +YA CGE +AR MFD+MPQ++V TW+ M
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGM---------------------- 188
Query: 183 RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSI 242
+ G A+ G +EEAL +F E E N+ + +V+ CA LE G+ I
Sbjct: 189 ---------MYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI 239
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXX 302
H + + F + +V ++L+ +Y KCG E +VF+ + + + W++M+ +A H
Sbjct: 240 HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHT 299
Query: 303 XXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGC 362
M SGMKPN +TF+ VL+ACSH GLVD+GR +F M+ I P +HY
Sbjct: 300 QKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYAS 358
Query: 363 LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLN 422
LVD+L RAGRL+EA EVI NM + P VWGALL C +HKN +LA A + EL P++
Sbjct: 359 LVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVS 418
Query: 423 DGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 482
G ++ +SN YA G++E+ ++ R+ ++ RG KK G S + VH F AG+ H ++
Sbjct: 419 SGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKS 478
Query: 483 KGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMP 542
K I+E +L +M+ GYI DTS VL +++ ++K + HSE+LA+ +GLI P
Sbjct: 479 KEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRP 538
Query: 543 IRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
IR+MKNLRVC DCH A+K +S R I+VRD NRFH F++G C+C DYW
Sbjct: 539 IRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 159/369 (43%), Gaps = 37/369 (10%)
Query: 91 CSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP 150
C LL + S I G +H YV K G ++ N L++ Y S ++L FD
Sbjct: 19 CDLLLSSARTRSTI-KGLQLHGYVVKSGLSLIPLVANNLINFY------SKSQLPFD--- 68
Query: 151 QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSE 210
+R F+ P+++ +W+S+IS A+ + +L +
Sbjct: 69 ----------------------SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKK 106
Query: 211 MEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGC 270
M RP++ + + +CA L + G+S+H + G+ +V+V ++L+DMY KCG
Sbjct: 107 MMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGE 166
Query: 271 LEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
+ ++FD M +R VV+WS M+ G+A + + N +F V+
Sbjct: 167 IVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISV 226
Query: 331 CSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGV 390
C++ L++ GR+ + + LV L S+ G E A +V + V G
Sbjct: 227 CANSTLLELGRQIHGLSIKSSFDSSSFVGSS-LVSLYSKCGVPEGAYQVFNEVPVKNLG- 284
Query: 391 VWGALLGGCRLHKNIKLAEEAMRH--LSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRS 448
+W A+L H + + E + LS + P N ++ + N + AG +E
Sbjct: 285 IWNAMLKAYAQHSHTQKVIELFKRMKLSGMKP-NFITFLNVLNACSHAGLVDEGRYYFDQ 343
Query: 449 MKSRGVKKT 457
MK ++ T
Sbjct: 344 MKESRIEPT 352
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 32/248 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W+ + +A+ G + + LF ++ + ++ S ++ C S+ + GR IH
Sbjct: 182 VVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG 241
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
K F S+ + + L+ LY+ CG A +F+++P +++ WN M
Sbjct: 242 LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAM------------ 289
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
+ A+ +++ + +F M+ G +PN +T + VL AC+
Sbjct: 290 -------------------LKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR-ERTVVSWSS 291
G ++ G+ + + +L+DM + G L+E V M + T W +
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 292 MIVGFAMH 299
++ +H
Sbjct: 391 LLTSCTVH 398
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/511 (37%), Positives = 296/511 (57%), Gaps = 6/511 (1%)
Query: 85 LPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHAR- 143
L DH +L++C S+ HA + KLG+ + L + Y C + AR
Sbjct: 27 LTDHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARR 86
Query: 144 -LMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSE 202
L++ V N++I L+ G+ G A+ + + +NV +W +I G + E
Sbjct: 87 LLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYE 146
Query: 203 EALRVFSEM-EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
EAL+ M +PN+ + + L ACA+LGDL K +H +G N + +AL
Sbjct: 147 EALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSAL 206
Query: 262 IDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
+D+Y KCG + VF ++ V W++MI GFA H M + P+
Sbjct: 207 VDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDS 266
Query: 322 VTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 381
+TF+G+L CSH GL+++G+E+F +M R + I P +EHYG +VDLL RAGR++EA E+I
Sbjct: 267 ITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIE 326
Query: 382 NMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEE 441
+M + P+ V+W +LL R +KN +L E A+++LS+ G YV++SN+Y+ KWE
Sbjct: 327 SMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKA---KSGDYVLLSNIYSSTKKWES 383
Query: 442 VSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 501
++R M G++K G S + G++H F AGD +H + K I+++ E L+ K K +G+
Sbjct: 384 AQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGF 443
Query: 502 IPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKL 561
+ DT +VL+D+ +E+KE L HSEKLAL Y ++ + PG IRI KN+R+C DCH +K
Sbjct: 444 VSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKA 503
Query: 562 VSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
VS++ NR I++RDR RFH F++G C+C+DYW
Sbjct: 504 VSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/578 (35%), Positives = 312/578 (53%), Gaps = 40/578 (6%)
Query: 26 HHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQ-LSI 84
+HL + L + N D P +V W S + + + G P + +S+F ++ + +
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPV 127
Query: 85 LPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARL 144
P+ +T + + KAC+ ++ G+ IHA ++ G + N+++ + L+ +Y C + AR
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARR 187
Query: 145 MFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEA 204
+FD M IG+ RNV SWTS+I+ A+ EA
Sbjct: 188 VFDSM-----------IGY------------------GRNVVSWTSMITAYAQNARGHEA 218
Query: 205 LRVFSEMER--EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALI 262
+ +F R N+ + +V+ AC+ LG L++GK H G+ N V +L+
Sbjct: 219 IELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLL 278
Query: 263 DMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHV 322
DMY KCG L ++F +R +V+S++SMI+ A H M+ + PN+V
Sbjct: 279 DMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYV 338
Query: 323 TFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 382
T +GVLHACSH GLV++G E+ ++M YG+VP HY C+VD+L R GR++EA E+
Sbjct: 339 TLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKT 398
Query: 383 MSV--PPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWE 440
+ V ++WGALL RLH +++ EA + L + + Y+ +SN YA +G WE
Sbjct: 399 IEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWE 458
Query: 441 EVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKG 500
+ +R MK G K CS I V+ F AGD + ++ I + L +MK +G
Sbjct: 459 DSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERG 518
Query: 501 Y------IPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCED 554
+ I +S V +D+++E K+ + H E+LAL YGL++ G IRIM NLR+C D
Sbjct: 519 HRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRD 578
Query: 555 CHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
CH A KL+SEI REIVVRD NRFHCFKNG+CTC+DYW
Sbjct: 579 CHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 123/272 (45%), Gaps = 18/272 (6%)
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
V KL +N N+L L G S D T N ++ + ++ A
Sbjct: 36 VHKLSESTNAAFTNLLHTLTLKLGFAS------------DTFTVNHLVISYVKLKEINTA 83
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM-EREGSRPNEVTVVAVLVACAQ 232
R LFD M NV SWTSVISG G + AL +F +M E PNE T +V AC+
Sbjct: 84 RKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSA 143
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM--RERTVVSWS 290
L + GK+IH E +G RN+ V ++L+DMY KC +E RVFD M R VVSW+
Sbjct: 144 LAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWT 203
Query: 291 SMIVGFAMHXXXXXXXXXXXXM--IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
SMI +A + + + N V+ ACS +G + G+ ++
Sbjct: 204 SMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVT 263
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 380
R G L+D+ ++ G L A ++
Sbjct: 264 RG-GYESNTVVATSLLDMYAKCGSLSCAEKIF 294
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/481 (39%), Positives = 280/481 (58%), Gaps = 9/481 (1%)
Query: 21 ATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLR 80
A S HL+ A ++ P +++ + A L E A I+++ +L
Sbjct: 56 ACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRA-------LSLLDEPNAHSIAITVYRKLW 108
Query: 81 QLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETS 140
L PD FT F+LK SD+ GR IH V GF S++ + L+ +Y SCG
Sbjct: 109 ALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLG 168
Query: 141 HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMP--RRNVRSWTSVISGLAKC 198
AR MFD+M +DV WN ++ G++ AR L + MP RN SWT VISG AK
Sbjct: 169 DARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKS 228
Query: 199 GMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVC 258
G + EA+ VF M E P+EVT++AVL ACA LG LE G+ I + + G R V +
Sbjct: 229 GRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLN 288
Query: 259 NALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMK 318
NA+IDMY K G + + VF+ + ER VV+W+++I G A H M+++G++
Sbjct: 289 NAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVR 348
Query: 319 PNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 378
PN VTFI +L ACSHVG VD G+ F MR YGI P +EHYGC++DLL RAG+L EA E
Sbjct: 349 PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADE 408
Query: 379 VIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGK 438
VI +M N +WG+LL +H +++L E A+ L +L+P N G Y++++N+Y+ G+
Sbjct: 409 VIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGR 468
Query: 439 WEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM 498
W+E +R MK GVKK G SSI ++ V++F++GD THPQ + I E+ +++ ++++
Sbjct: 469 WDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQS 528
Query: 499 K 499
K
Sbjct: 529 K 529
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/539 (35%), Positives = 286/539 (53%), Gaps = 33/539 (6%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WN+ + G P + I F+ R++ P+ T L AC+ + G +H V
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
+ GF +++ + N L+ Y C + + ++F +M
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT------------------------ 272
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
+N SW S+++ + E+A ++ ++ ++ + +VL ACA +
Sbjct: 273 -------KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAG 325
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
LE G+SIH A R ++V +AL+DMY KCGC+E+ + FD M E+ +V+ +S+I G
Sbjct: 326 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385
Query: 296 FAMHXXXXXXXXXXXXMIRSGM--KPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
+A M G PN++TF+ +L ACS G V+ G + F MR YGI
Sbjct: 386 YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGI 445
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
PG EHY C+VD+L RAG +E A E I M + P VWGAL CR+H +L A
Sbjct: 446 EPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 505
Query: 414 HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFV 473
+L +LDP + G +V++SN +A AG+W E + +R +K G+KK G S IT+ VH F
Sbjct: 506 NLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQ 565
Query: 474 AGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYG 533
A D +H K I KL +M+ GY PD + L D+E+E+K + HSEKLAL +G
Sbjct: 566 AKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFG 625
Query: 534 LINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
L++ +PIRI KNLR+C DCH+ K VS REI+VRD NRFH FK+G C+CKDYW
Sbjct: 626 LLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 177/453 (39%), Gaps = 60/453 (13%)
Query: 9 PPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGA 68
PP +L + S+ H + AR +L T A +V W S + A+ G
Sbjct: 39 PPPPFLANYLINMYSKLDHPESARLVLRLTPAR----------NVVSWTSLISGLAQNGH 88
Query: 69 PCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNM 128
+ F +R+ ++P+ FT KA VTG+ IHA K G
Sbjct: 89 FSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG---------R 139
Query: 129 LLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSW 188
+L ++ C A M+ K +D AR LFD +P RN+ +W
Sbjct: 140 ILDVFVGCS----AFDMYCKTRLRD------------------DARKLFDEIPERNLETW 177
Query: 189 TSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEG 248
+ IS G EA+ F E R PN +T A L AC+ L G +H
Sbjct: 178 NAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 237
Query: 249 NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX 308
+GF +V VCN LID Y KC + +F M + VSW S++ + +
Sbjct: 238 SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHY----GCLV 364
+ ++ + VL AC+ + ++ GR + + VE LV
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA-----HAVKACVERTIFVGSALV 352
Query: 365 DLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDG 424
D+ + G +E++ + M N V +L+GG + + A+ E+ P G
Sbjct: 353 DMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDM---ALALFEEMAPRGCG 408
Query: 425 ------YYVVMSNVYAEAGKWEEVSRIRRSMKS 451
+V + + + AG E +I SM+S
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 140/318 (44%), Gaps = 9/318 (2%)
Query: 123 LILQNMLLHLYASCGETSHARLM--FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSM 180
L+L+N + G HAR++ D P +A N +I +AR +
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLT 68
Query: 181 PRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGK 240
P RNV SWTS+ISGLA+ G AL F EM REG PN+ T A A L GK
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 241 SIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHX 300
IH A G + +V+V + DMY K ++ ++FD + ER + +W++ I
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 301 XXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHY 360
R PN +TF L+ACS ++ G + ++ R G V
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS-GFDTDVSVC 247
Query: 361 GCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG-CRLHKNIKLAEEAMRHLSELD 419
L+D + ++ + + M N V W +L+ + H++ K + +R ++
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGT-KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 420 PLNDGYYVVMSNVYAEAG 437
+D +++ S + A AG
Sbjct: 307 ETSD--FMISSVLSACAG 322
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 180/472 (38%), Positives = 275/472 (58%), Gaps = 11/472 (2%)
Query: 35 LIKTNAPLSHVDLAH-------VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPD 87
LI+ + L VD A+ P + + + + F G D +SL+ R+ S+LPD
Sbjct: 67 LIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPD 126
Query: 88 HFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFD 147
++ + +LKAC D+ R IHA V KLGF S+ + ++ +Y GE +A+ MFD
Sbjct: 127 NYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFD 182
Query: 148 KMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRV 207
+MP +D +MI G + A +LF + ++ WT++I GL + +AL +
Sbjct: 183 EMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALEL 242
Query: 208 FSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVK 267
F EM+ E NE T V VL AC+ LG LE G+ +H F E + +V NALI+MY +
Sbjct: 243 FREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSR 302
Query: 268 CGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGV 327
CG + E RVF MR++ V+S+++MI G AMH M+ G +PN VT + +
Sbjct: 303 CGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVAL 362
Query: 328 LHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 387
L+ACSH GL+D G E F M+R + + P +EHYGC+VDLL R GRLEEA I N+ + P
Sbjct: 363 LNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEP 422
Query: 388 NGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRR 447
+ ++ G LL C++H N++L E+ + L E + + G YV++SN+YA +GKW+E + IR
Sbjct: 423 DHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRE 482
Query: 448 SMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK 499
SM+ G++K PGCS+I +D +HEF+ GD HP + I++ ++L ++ K
Sbjct: 483 SMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFK 534
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 299/543 (55%), Gaps = 34/543 (6%)
Query: 53 IVPWNSCLKFFAERG--APCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
+V WNS + ++ RG C + + + ++ P+ T ++ AC GR I
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H V K G + + N ++ Y G+T GD+
Sbjct: 157 HGLVMKFGVLEEVKVVNAFINWY---GKT----------------------------GDL 185
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
++ LF+ + +N+ SW ++I + G++E+ L F+ R G P++ T +AVL +C
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC 245
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+G + + IH GF N + AL+D+Y K G LE+ VF + ++W+
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
+M+ +A H M+ G+ P+HVTF +L+ACSH GLV++G+ +F M +
Sbjct: 306 AMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
Y I P ++HY C+VDLL R+G L++A +I M + P+ VWGALLG CR++K+ +L +
Sbjct: 366 YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTK 425
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
A L EL+P + YV++SN+Y+ +G W++ SRIR MK +G+ + GCS I +H
Sbjct: 426 AAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIH 485
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMK-GYIPDTSVVLLDMEDEQKEIFLYRHSEKLA 529
+FV GD +HP+++ I + +++ KMK + GY T VL D+ ++ KE + +HSEK+A
Sbjct: 486 KFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIA 545
Query: 530 LVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCK 589
+ +GL+ P PI I KNLR+C DCH K +S IE R I++RD RFH F +G+C+C
Sbjct: 546 MAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCS 605
Query: 590 DYW 592
DYW
Sbjct: 606 DYW 608
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 15/262 (5%)
Query: 160 MIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM--EREGSR 217
++G + G A LFD MP R++ SW S+ISG + G + V S M G R
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 218 PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRV 277
PNEVT ++++ AC G E G+ IH G L V V NA I+ Y K G L C++
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 278 FDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
F+ + + +VSW++MIV + R G +P+ TF+ VL +C +G+V
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGC----LVDLLSRAGRLEEAREVIANMSVPPNGVVWG 393
+ ++ + G C L+DL S+ GRLE++ V ++ P+ + W
Sbjct: 252 RLAQGIHGLI-----MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWT 305
Query: 394 ALLGGCRLHKNIKLAEEAMRHL 415
A+L H +A++H
Sbjct: 306 AMLAAYATH---GFGRDAIKHF 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 18/205 (8%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGR-I 109
P + W + L +A G D I F + I PDH T + LL AC+ S + G+
Sbjct: 299 PDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHY 358
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ-DVATWNIMIGHLISAG 168
++ L + ++ L G A + +MP + W ++G
Sbjct: 359 FETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYK 418
Query: 169 D----VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
D AA LF+ P R+ R++ + + + G+ ++A R+ + M+++G
Sbjct: 419 DTQLGTKAAERLFELEP-RDGRNYVMLSNIYSASGLWKDASRIRNLMKQKG--------- 468
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGN 249
LV + +E G IH+F G+
Sbjct: 469 --LVRASGCSYIEHGNKIHKFVVGD 491
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/531 (36%), Positives = 295/531 (55%), Gaps = 35/531 (6%)
Query: 63 FAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSN 122
++++G + + F + + P+ +T + +L +C DI G++IH + K GF+S
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 123 LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPR 182
L Q LL +Y C L+ D + +F +
Sbjct: 302 LASQTSLLTMYLRCS------LVDDSLR-------------------------VFKCIEY 330
Query: 183 RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSI 242
N SWTS+ISGL + G E AL F +M R+ +PN T+ + L C+ L E G+ I
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXX 302
H GF R+ Y + LID+Y KCGC + VFD + E V+S ++MI +A +
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 303 XXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGC 362
MI G++PN VT + VL AC++ LV++G E F R+D I+ +HY C
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYAC 509
Query: 363 LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLN 422
+VDLL RAGRLEEA E++ + P+ V+W LL C++H+ +++AE R + E++P +
Sbjct: 510 MVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGD 568
Query: 423 DGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDE-THPQ 481
+G ++MSN+YA GKW V ++ MK +KK P S + I+ H F+AGD +HP
Sbjct: 569 EGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPN 628
Query: 482 AKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGM 541
++ I E E+L+ K K GY+ D S V DME+ KE L++HSEKLA+ + + G
Sbjct: 629 SEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGG- 687
Query: 542 PIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
IRI+KNLRVC DCH+ +K+VS + REI+ RD RFH F++G+C+C DYW
Sbjct: 688 SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 180/428 (42%), Gaps = 74/428 (17%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
IV WNS + + + + + ++ + ++LPD +T S + KA + S + H
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 113 YVQKLGFQ-SNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
LG + SN+ + + L+ +Y G+T A+L+ D++ ++DV ++I
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDV----VLI---------- 235
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
T++I G ++ G EA++ F M E +PNE T +VL++C
Sbjct: 236 -----------------TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
L D+ GK IH +GF + +L+ MY++C +++ RVF + VSW+S
Sbjct: 279 NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTS 338
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
+I G + M+R +KPN T L CS++ + ++GR+ I+ + Y
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK-Y 397
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAR---------------------------------- 377
G L+DL + G + AR
Sbjct: 398 GFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLF 457
Query: 378 EVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDP----LNDGYYVVMSNVY 433
E + N+ + PN V ++L C N +L EE L + +Y M ++
Sbjct: 458 ERMINLGLQPNDVTVLSVLLAC---NNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLL 514
Query: 434 AEAGKWEE 441
AG+ EE
Sbjct: 515 GRAGRLEE 522
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 3/235 (1%)
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
+ GD+ AR +FD M R++ +W S+I+ L K S+EA+ ++ M P+E T+
Sbjct: 110 LKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLS 169
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGF-LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE 283
+V A + L + + H A G + NV+V +AL+DMYVK G E V D + E
Sbjct: 170 SVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE 229
Query: 284 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREF 343
+ VV +++IVG++ M+ ++PN T+ VL +C ++ + G+
Sbjct: 230 KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 344 FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+M + G + L+ + R ++++ V + PN V W +L+ G
Sbjct: 290 HGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISG 342
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 35/251 (13%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P V W S + + G + F ++ + SI P+ FT S L+ C+ + GR I
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H V K GF + + L+ LY CG + ARL+FD + + DV + N M
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTM---------- 440
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
I A+ G EAL +F M G +PN+VTV++VL+AC
Sbjct: 441 ---------------------IYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLAC 479
Query: 231 AQLGDLEFG-KSIHRFAEGNGFLRNV-YVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
+E G + F + L N Y C ++D+ + G LEE + + +V
Sbjct: 480 NNSRLVEEGCELFDSFRKDKIMLTNDHYAC--MVDLLGRAGRLEEAEMLTTEVINPDLVL 537
Query: 289 WSSMIVGFAMH 299
W +++ +H
Sbjct: 538 WRTLLSACKVH 548
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 261 LIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPN 320
L+D +KCG ++ +VFDGM ER +V+W+S+I H MI + + P+
Sbjct: 105 LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPD 164
Query: 321 HVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI-------VPGVEHYGCLVDLLSRAGRL 373
T V A S + L + +R +G+ V V LVD+ + G+
Sbjct: 165 EYTLSSVFKAFSDLSLEKEA-------QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKT 217
Query: 374 EEAREVI 380
EA+ V+
Sbjct: 218 REAKLVL 224
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 184/447 (41%), Positives = 272/447 (60%), Gaps = 3/447 (0%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
+N ++ + P ++I L+ L + P H T +F+ A S R++H+
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
+ GF+S+ L+ YA G AR +FD+M ++DV WN MI GD+ AA +
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVACAQLG 234
LFDSMPR+NV SWT+VISG ++ G EAL++F ME++ S +PN +TVV+VL ACA LG
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM-RERTVVSWSSMI 293
+LE G+ + +A NGF N+YVCNA I+MY KCG ++ R+F+ + +R + SW+SMI
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
A H M+R G KP+ VTF+G+L AC H G+V KG+E F M + I
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
P +EHYGC++DLL R G+L+EA ++I M + P+ VVWG LLG C H N+++AE A
Sbjct: 350 SPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASE 409
Query: 414 HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGV-VHEF 472
L +L+P N G V+MSN+YA KW+ V R+R+ MK + K G S GV VH+F
Sbjct: 410 ALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKF 469
Query: 473 VAGDETHPQAKGIFEMWEKLLVKMKMK 499
D++HP++ I+++ E++ +MK++
Sbjct: 470 TVEDKSHPRSYEIYQVLEEIFRRMKLE 496
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 174/462 (37%), Positives = 270/462 (58%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ WN + + ++I L + + + + P T +L AC+ D + +H
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
YV + + +L L+N L++ YA+CGE A +F M +DV +W ++ + G++
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
AR FD MP R+ SWT +I G + G E+L +F EM+ G P+E T+V+VL ACA
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
LG LE G+ I + + N +V V NALIDMY KCGC E+ +VF M +R +W++M
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
+VG A + M ++P+ +T++GVL AC+H G+VD+ R+FF MR D+
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
I P + HYGC+VD+L RAG ++EA E++ M + PN +VWGALLG RLH + +AE A
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAA 560
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
+ + EL+P N Y ++ N+YA +W+++ +RR + +KKTPG S I ++G HEF
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Query: 473 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMED 514
VAGD++H Q++ I+ E+L + Y+PDTS +L + D
Sbjct: 621 VAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 169/380 (44%), Gaps = 65/380 (17%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSD-IVTGRI 109
P +V WN+ +K +++ + + L+L + + + PD T FLL + G+
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H +V K G SNL +QN L+ +Y+ CG AR +FD+ ++DV +WN+M
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM--------- 207
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
ISG + EE++ + EMER P VT++ VL A
Sbjct: 208 ----------------------ISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
C+++ D + K +H + ++ + NAL++ Y CG ++ R+F M+ R V+SW
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 305
Query: 290 SSMIVGFAMHXXXXXXXXXXXXM-IR------------------------------SGMK 318
+S++ G+ M +R +GM
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 319 PNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 378
P+ T + VL AC+H+G ++ G T + ++ I V L+D+ + G E+A++
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN-KIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 379 VIANMSVPPNGVVWGALLGG 398
V +M + W A++ G
Sbjct: 425 VFHDMD-QRDKFTWTAMVVG 443
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 12/292 (4%)
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
G V A LF +P +V W ++I G +K E +R++ M +EG P+ T +
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 227 LVACAQLGD-LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
L + G L GK +H G N+YV NAL+ MY CG ++ VFD +
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHV---GLVDKGRE 342
V SW+ MI G+ M R+ + P VT + VL ACS V L + E
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
+ + + + P + LV+ + G ++ A + +M + + W +++ G
Sbjct: 261 YVSECKTE----PSLRLENALVNAYAACGEMDIAVRIFRSMKA-RDVISWTSIVKGYVER 315
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGV 454
N+KLA + D ++ + +M + Y AG + E I R M+S G+
Sbjct: 316 GNLKLARTYFDQMPVRDRIS---WTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 315/608 (51%), Gaps = 73/608 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
I+ WN+ + + E G + + LF +R LS+ PD T + ++ AC + D GR IHA
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDK--------------------MPQQ 152
YV GF ++ + N L +Y + G A +F + +P +
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 153 DVATWNIM----------------------------------------IGHLISAGD--- 169
+ T+ +M I ++I A +
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 170 -------VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
+ A D+F ++PR+NV SWTS+I+GL EAL +F + +PN +T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAIT 500
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+ A L ACA++G L GK IH G + ++ NAL+DMYV+CG + F+ +
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-Q 559
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
++ V SW+ ++ G++ M++S ++P+ +TFI +L CS +V +G
Sbjct: 560 KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLM 619
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
+F+ M DYG+ P ++HY C+VDLL RAG L+EA + I M V P+ VWGALL CR+H
Sbjct: 620 YFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 678
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSS 462
I L E + +H+ ELD + GYY+++ N+YA+ GKW EV+++RR MK G+ GCS
Sbjct: 679 HKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSW 738
Query: 463 ITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLY 522
+ + G VH F++ D+ HPQ K I + E KM G + +D + ++
Sbjct: 739 VEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFC 798
Query: 523 RHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFK 582
HSE+ A+ +GLINT PGMPI + KNL +CE+CH +K +S+ REI VRD FH FK
Sbjct: 799 GHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFK 858
Query: 583 NGACTCKD 590
+G C+C D
Sbjct: 859 DGECSCGD 866
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 173/352 (49%), Gaps = 36/352 (10%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLS-ILPDHFTCSFLLKACTISSDIVTGRIIH 111
+ WN + +A++G + + L+ R+ + + PD +T +L+ C D+ G+ +H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+V + G++ ++ + N L+ +Y CG DV
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCG-------------------------------DVK 248
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+AR LFD MPRR++ SW ++ISG + GM E L +F M P+ +T+ +V+ AC
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
LGD G+ IH + GF ++ VCN+L MY+ G E ++F M + +VSW++
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI G+ + M + +KP+ +T VL AC+ +G +D G E + +
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGGCRLH 402
++ V L+++ S+ +++A ++ N +P V+ W +++ G RL+
Sbjct: 429 -LISYVIVANNLINMYSKCKCIDKALDIFHN--IPRKNVISWTSIIAGLRLN 477
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 3/256 (1%)
Query: 144 LMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEE 203
+ M V N + + G++ A +F M RN+ SW ++ G AK G +E
Sbjct: 119 IALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDE 178
Query: 204 ALRVFSEMEREGS-RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALI 262
A+ ++ M G +P+ T VL C + DL GK +H G+ ++ V NALI
Sbjct: 179 AMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALI 238
Query: 263 DMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHV 322
MYVKCG ++ +FD M R ++SW++MI G+ + M + P+ +
Sbjct: 239 TMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLM 298
Query: 323 TFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 382
T V+ AC +G GR+ + G + L + AG EA ++ +
Sbjct: 299 TLTSVISACELLGDRRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 383 MSVPPNGVVWGALLGG 398
M + V W ++ G
Sbjct: 358 ME-RKDIVSWTTMISG 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 11/235 (4%)
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
+ GL G EEA+++ + M+ +E VA++ C E G ++ A +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 252 LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 311
V + NA + M+V+ G L + VF M ER + SW+ ++ G+A
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 312 MIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRA 370
M+ G+KP+ TF VL C + + +G+E + R YG ++ L+ + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKC 244
Query: 371 GRLEEAREVIANMSVPPNGVV-WGALLGGC----RLHKNIKLAEEAMRHLSELDP 420
G ++ AR + M P ++ W A++ G H+ ++L AMR LS +DP
Sbjct: 245 GDVKSARLLFDRM--PRRDIISWNAMISGYFENGMCHEGLELF-FAMRGLS-VDP 295
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 348 bits (892), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 280/473 (59%), Gaps = 14/473 (2%)
Query: 27 HLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSI-L 85
+L AR + + + P +H+ + + ++S L A S F + S+
Sbjct: 72 NLSYARFIFDRFSFPNTHL---YAAVLTAYSSSLPLHAS-----SAFSFFRLMVNRSVPR 123
Query: 86 PDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASC-GETSHARL 144
P+HF +LK+ S + ++H ++ K GF +++Q LLH YAS + AR
Sbjct: 124 PNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQ 183
Query: 145 MFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEA 204
+FD+M +++V +W M+ +GD+ A LF+ MP R+V SW ++++ + G+ EA
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEA 243
Query: 205 LRVFSEMEREGS-RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALID 263
+ +F M E S RPNEVTVV VL ACAQ G L+ K IH FA +V+V N+L+D
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303
Query: 264 MYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR---SGMKPN 320
+Y KCG LEE VF ++++ +W+SMI FA+H M++ + +KP+
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPD 363
Query: 321 HVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 380
H+TFIG+L+AC+H GLV KGR +F +M +GI P +EHYGCL+DLL RAGR +EA EV+
Sbjct: 364 HITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVM 423
Query: 381 ANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWE 440
+ M + + +WG+LL C++H ++ LAE A+++L L+P N GY +M+N+Y E G WE
Sbjct: 424 STMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWE 483
Query: 441 EVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 493
E R R+ +K + K PG S I ID VH+F + D++HP+ + I+ + + L+
Sbjct: 484 EARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 344 bits (883), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 179/490 (36%), Positives = 273/490 (55%), Gaps = 34/490 (6%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P + +N+ K F P ++ L++R+ + S+ P +T S L+KA + +S G +
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--GESL 891
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATW------------- 157
A++ K GF ++ +Q L+ Y++ G AR +FD+MP++D W
Sbjct: 892 QAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDM 951
Query: 158 ------------------NIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCG 199
N +I + G++ A LF+ MP +++ SWT++I G ++
Sbjct: 952 DSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNK 1011
Query: 200 MSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCN 259
EA+ VF +M EG P+EVT+ V+ ACA LG LE GK +H + NGF+ +VY+ +
Sbjct: 1012 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGS 1071
Query: 260 ALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
AL+DMY KCG LE VF + ++ + W+S+I G A H M +KP
Sbjct: 1072 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 1131
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
N VTF+ V AC+H GLVD+GR + M DY IV VEHYG +V L S+AG + EA E+
Sbjct: 1132 NAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALEL 1191
Query: 380 IANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKW 439
I NM PN V+WGALL GCR+HKN+ +AE A L L+P+N GYY ++ ++YAE +W
Sbjct: 1192 IGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW 1251
Query: 440 EEVSRIRRSMKSRGVKKT-PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM 498
+V+ IR M+ G++K PG SSI ID H F A D++H + + + +++ +M +
Sbjct: 1252 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGL 1311
Query: 499 KGYIPDTSVV 508
GY+ +T V
Sbjct: 1312 AGYVQETENV 1321
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 33/252 (13%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
V I+ W + +K +++ + I++F ++ + I+PD T S ++ AC + G+
Sbjct: 994 VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKE 1053
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H Y + GF ++ + + L+ +Y+ CG A L+F +P++++ WN
Sbjct: 1054 VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWN----------- 1102
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
S+I GLA G ++EAL++F++ME E +PN VT V+V A
Sbjct: 1103 --------------------SIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 230 CAQLGDLEFGKSIHR-FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR-ERTVV 287
C G ++ G+ I+R + + NV ++ ++ K G + E + M E V
Sbjct: 1143 CTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAV 1202
Query: 288 SWSSMIVGFAMH 299
W +++ G +H
Sbjct: 1203 IWGALLDGCRIH 1214
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 136/357 (38%), Gaps = 31/357 (8%)
Query: 152 QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM 211
QD N I S + A M NV + ++ G C +L ++ M
Sbjct: 803 QDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM 862
Query: 212 EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
R+ P+ T +++ A + FG+S+ GF +V + LID Y G +
Sbjct: 863 LRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRI 920
Query: 272 EEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHAC 331
E +VFD M ER ++W++M+ + M + N T +++
Sbjct: 921 REARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQM----SEKNEATSNCLINGY 976
Query: 332 SHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPN 388
+G +++ F M V + + ++ S+ R EA V M + P+
Sbjct: 977 MGLGNLEQAESLFNQMP-----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 389 GVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYY-VVMSNVYAEAGKWEEVSRIRR 447
V ++ C +++ +E + + + D Y + ++Y++ G E +
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 448 SMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD 504
++ KK C + I+G+ A G + K+ KM+M+ P+
Sbjct: 1092 NLP----KKNLFCWNSIIEGLA------------AHGFAQEALKMFAKMEMESVKPN 1132
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 342 bits (876), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 287/532 (53%), Gaps = 66/532 (12%)
Query: 28 LKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPD 87
L A +L +TN + + P + NS ++ A+ P +F +++ + D
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD 116
Query: 88 HFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASC----------- 136
+FT FLLKAC+ S + +++H +++KLG S++ + N L+ Y+ C
Sbjct: 117 NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176
Query: 137 ----------------------GETSHARLMFDKMPQQDVATWNIMIGHLI--------- 165
GE AR +FD+MPQ+D+ +WN M+
Sbjct: 177 FEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAF 236
Query: 166 ----------------------SAGDVGAARDLFDSMP--RRNVRSWTSVISGLAKCGMS 201
AGD+ AR +FD MP +NV +WT +I+G A+ G+
Sbjct: 237 ELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
+EA R+ +M G + + V+++L AC + G L G IH + + N YV NAL
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNAL 356
Query: 262 IDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
+DMY KCG L++ VF+ + ++ +VSW++M+ G +H M R G++P+
Sbjct: 357 LDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 322 VTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 381
VTFI VL +C+H GL+D+G ++F M + Y +VP VEHYGCLVDLL R GRL+EA +V+
Sbjct: 417 VTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQ 476
Query: 382 NMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEE 441
M + PN V+WGALLG CR+H + +A+E + +L +LDP + G Y ++SN+YA A WE
Sbjct: 477 TMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEG 536
Query: 442 VSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 493
V+ IR MKS GV+K G SS+ ++ +HEF D++HP++ I++M L+
Sbjct: 537 VADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 157/442 (35%), Positives = 264/442 (59%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D + V +V WN + + + G I ++ + + PD T L+ +C++ D+
Sbjct: 215 DESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLN 274
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
G+ + YV++ G + + L N L+ +++ CG+ AR +FD + ++ + +W MI
Sbjct: 275 RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYA 334
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
G + +R LFD M ++V W ++I G + ++AL +F EM+ ++P+E+T++
Sbjct: 335 RCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
L AC+QLG L+ G IHR+ E NV + +L+DMY KCG + E VF G++ R
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN 454
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
++++++I G A+H MI +G+ P+ +TFIG+L AC H G++ GR++F+
Sbjct: 455 SLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS 514
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
M+ + + P ++HY +VDLL RAG LEEA ++ +M + + VWGALL GCR+H N+
Sbjct: 515 QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNV 574
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
+L E+A + L ELDP + G YV++ +Y EA WE+ R RR M RGV+K PGCSSI +
Sbjct: 575 ELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634
Query: 466 DGVVHEFVAGDETHPQAKGIFE 487
+G+V EF+ D++ P+++ I++
Sbjct: 635 NGIVCEFIVRDKSRPESEKIYD 656
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 183/402 (45%), Gaps = 70/402 (17%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLF---LRLRQLSILPDHFTCSFLLKACTISSDIVTG 107
P I WN ++ F+E P ++ L+ LR PDHFT L K C G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 108 RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA 167
+I +V KL + + N +H++ASCG+ +AR +FD+ P +D+ +WN +
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL------- 228
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
I+G K G +E+A+ V+ ME EG +P++VT++ ++
Sbjct: 229 ------------------------INGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
+C+ LGDL GK + + + NG + + NAL+DM+ KCG + E R+FD + +RT+V
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 288 SWSSMIVGFA-------------------------------MHXXXXXXXXXXXXMIRSG 316
SW++MI G+A M S
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 376
KP+ +T I L ACS +G +D G + + Y + V LVD+ ++ G + EA
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEA 443
Query: 377 REVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
V + N + + A++GG LH + A A+ + +E+
Sbjct: 444 LSVFHGIQT-RNSLTYTAIIGGLALHGD---ASTAISYFNEM 481
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 289/545 (53%), Gaps = 37/545 (6%)
Query: 54 VPWNSCLKFFA--ERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
V WNS + A ER P + + FL ++ + T S +L A + S G+ IH
Sbjct: 482 VSWNSIIGALARSERSLP-EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
K +N L+ Y CGE +F +M +
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAE-------------------- 580
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
RR+ +W S+ISG + +AL + M + G R + VL A A
Sbjct: 581 ----------RRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFA 630
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+ LE G +H + +V V +AL+DMY KCG L+ R F+ M R SW+S
Sbjct: 631 SVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNS 690
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKP-NHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
MI G+A H M G P +HVTF+GVL ACSH GL+++G + F M
Sbjct: 691 MISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDS 750
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC-RLH-KNIKLA 408
YG+ P +EH+ C+ D+L RAG L++ + I M + PN ++W +LG C R + + +L
Sbjct: 751 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 810
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGV 468
++A L +L+P N YV++ N+YA G+WE++ + R+ MK VKK G S +T+
Sbjct: 811 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDG 870
Query: 469 VHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKL 528
VH FVAGD++HP A I++ ++L KM+ GY+P T L D+E E KE L HSEKL
Sbjct: 871 VHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKL 930
Query: 529 ALVYGLINTKPG-MPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACT 587
A+ + L + +PIRIMKNLRVC DCH+A K +S+IE R+I++RD NRFH F++GAC+
Sbjct: 931 AVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACS 990
Query: 588 CKDYW 592
C D+W
Sbjct: 991 CSDFW 995
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 155/364 (42%), Gaps = 42/364 (11%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WNS + + G + + + +R+ ILP FT L +C G+ IH
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
KLG N+ + N L+ LYA G + R +F MP+ D +WN +IG L
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA-------- 492
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
R+ RS EA+ F +R G + N +T +VL A + L
Sbjct: 493 ---------RSERSLP-------------EAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE-RTVVSWSSM 292
E GK IH A N NALI Y KCG ++ ++F M E R V+W+SM
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR--- 349
I G+ + M+++G + + + VL A + V +++G E R
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 650
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
+ +V G LVD+ S+ GRL+ A M V N W +++ G H E
Sbjct: 651 ESDVVVG----SALVDMYSKCGRLDYALRFFNTMPV-RNSYSWNSMISGYARHGQ---GE 702
Query: 410 EAMR 413
EA++
Sbjct: 703 EALK 706
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 140/309 (45%), Gaps = 12/309 (3%)
Query: 141 HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGM 200
H+RL +++ +DV N +I + GD +AR +FD MP RN SW ++SG ++ G
Sbjct: 24 HSRLYKNRL-DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 201 SEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLE--FGKSIHRFAEGNGFLRNVYVC 258
+EAL +M +EG N+ V+VL AC ++G + FG+ IH + + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 259 NALIDMYVKC-GCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM 317
N LI MY KC G + F + + VSW+S+I ++ M G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 318 KPNHVTFIG-VLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 376
+P TF V ACS + E + G++ + LV +++G L A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 377 REVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLND---GYYVVMSNVY 433
R+V M + G ++G R K EEA + +++ + D YV++ + +
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQ----KWGEEATKLFMDMNSMIDVSPESYVILLSSF 318
Query: 434 AEAGKWEEV 442
E EEV
Sbjct: 319 PEYSLAEEV 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 2/263 (0%)
Query: 137 GETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLA 196
G H ++ + V N ++ G + AR +F M ++ SW S+I+GL
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 197 KCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVY 256
+ G EA+ + M R P T+++ L +CA L + G+ IH + G NV
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451
Query: 257 VCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX-XXXMIRS 315
V NAL+ +Y + G L E ++F M E VSW+S+I A R+
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 316 GMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 375
G K N +TF VL A S + + G++ + ++ I L+ + G ++
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDG 570
Query: 376 AREVIANMSVPPNGVVWGALLGG 398
++ + M+ + V W +++ G
Sbjct: 571 CEKIFSRMAERRDNVTWNSMISG 593
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 163/405 (40%), Gaps = 51/405 (12%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTI--SSDIVTGRIIH 111
V W + ++ G + + + + I + + +L+AC S I+ GR IH
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIH 127
Query: 112 AYVQKLGFQSNLILQNMLLHLYASC-GETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
+ KL + + ++ N+L+ +Y C G +A F + ++ +WN +I AGD
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD- 186
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
A R+FS M+ +GSRP E T +++
Sbjct: 187 ------------------------------QRSAFRIFSSMQYDGSRPTEYTFGSLVTTA 216
Query: 231 AQLG--DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
L D+ + I + +G L +++V + L+ + K G L +VF+ M R V+
Sbjct: 217 CSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVT 276
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD-----KGRE- 342
+ ++VG M S + + +++ +L + L + KGRE
Sbjct: 277 LNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 343 ---FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
T D+ + G LV++ ++ G + +AR V M+ + V W +++ G
Sbjct: 336 HGHVITTGLVDFMVGIG----NGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGL 390
Query: 400 RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSR 444
+ A E + + D L + ++ S + KW ++ +
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/618 (31%), Positives = 311/618 (50%), Gaps = 71/618 (11%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLR-QLSILPDHFTCSFLLKACTISSDI 104
DL +V W + +K + G + + LF + P+ F + + K+C+ S I
Sbjct: 93 DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 105 VTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
G+ H K G S+ ++N L+++Y+ C A + D +P D++ ++ +
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 165 ISAGDVGAARD----------------------LFDSMPRRN-----------------V 185
+ G D LF ++ N V
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 186 RSWTSVISGLAKCGMSEEALRV-------------------------------FSEMERE 214
+ ++I+ KCG A RV FS+M+ +
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 215 GSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEG 274
PNE T +L + A+L L+ G +H +G+ +V V NAL++MY K G +E+
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 275 CRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHV 334
+ F GM R +V+W++MI G + H MI +G PN +TFIGVL ACSH+
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452
Query: 335 GLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGA 394
G V++G +F + + + + P ++HY C+V LLS+AG ++A + + + + V W
Sbjct: 453 GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 395 LLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGV 454
LL C + +N +L ++ + E P + G YV++SN++A++ +WE V+++R M +RGV
Sbjct: 513 LLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572
Query: 455 KKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMED 514
KK PG S I I H F+A D HP+ I+ ++++ K+K GY PD + D+++
Sbjct: 573 KKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDE 632
Query: 515 EQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRD 574
EQ+E L HSEKLA+ YGLI T P+ + KN+R+C+DCH+A+KL+S+I R IV+RD
Sbjct: 633 EQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRD 692
Query: 575 RNRFHCFKNGACTCKDYW 592
NRFH F +G C+C DYW
Sbjct: 693 SNRFHHFLDGQCSCCDYW 710
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 18/313 (5%)
Query: 133 YASCGETSHARLMFDKMPQ--QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTS 190
Y GE+ HA L+ +D N +I + + AR LFD MP RNV SW +
Sbjct: 46 YLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCA 105
Query: 191 VISGLAKCGMSEEALRVFSEMEREG-SRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
++ G G E L++F M G SRPNE V +C+ G +E GK H
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKY 165
Query: 250 GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 309
G + + +V N L+ MY C E RV D + + +SS + G+
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVL 225
Query: 310 XXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSR 369
N++T++ L S++ ++ + + M R +G VE G L+++ +
Sbjct: 226 RKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAEVEACGALINMYGK 284
Query: 370 AGRLEEAREVIAN---MSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELD----PLN 422
G++ A+ V + ++ N + A K EEA+ S++D P N
Sbjct: 285 CGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQD-------KSFEEALNLFSKMDTKEVPPN 337
Query: 423 DGYYVVMSNVYAE 435
+ + ++ N AE
Sbjct: 338 EYTFAILLNSIAE 350
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 184/533 (34%), Positives = 273/533 (51%), Gaps = 43/533 (8%)
Query: 63 FAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSN 122
+ + G D + LF+ L + D F S +LKAC ++ G+ IHA V KLG +S
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 123 LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPR 182
+ + L+ Y C A F ++ + + DV
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPN---------------DV------------ 352
Query: 183 RNVRSWTSVISGLAKCGMSEEALRVFSEM-EREGSRPNEVTVVAVLVACAQLGDLEFGKS 241
SW+++ISG + EEA++ F + + S N T ++ AC+ L D G
Sbjct: 353 ----SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXX 301
+H A + + Y +ALI MY KCGCL++ VF+ M +V+W++ I G A +
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
M+ GMKPN VTFI VL ACSH GLV++G+ M R Y + P ++HY
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528
Query: 362 CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL 421
C++D+ +R+G L+EA + + NM P+ + W L GC HKN++L E A L +LDP
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE 588
Query: 422 NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 481
+ YV+ N+Y AGKWEE + + + M R +KK CS I G +H F+ GD+ HPQ
Sbjct: 589 DTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQ 648
Query: 482 AKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINT--KP 539
+ I+E K+K + + +M + +++ L HSE+LA+ +GLI+
Sbjct: 649 TQEIYE-------KLKEFDGFMEGDMFQCNMTERREQ--LLDHSERLAIAFGLISVHGNA 699
Query: 540 GMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
PI++ KNLR C DCH K VS + EIV+RD RFH FK G C+C DYW
Sbjct: 700 PAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 152/361 (42%), Gaps = 45/361 (12%)
Query: 63 FAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSN 122
+AE+G + LF + P + LLK+ + GR IHA+V + G SN
Sbjct: 159 YAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSN 218
Query: 123 LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPR 182
++ ++++Y CG W VGA R +FD M
Sbjct: 219 TSIETGIVNMYVKCG-------------------WL-----------VGAKR-VFDQMAV 247
Query: 183 RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSI 242
+ + T ++ G + G + +AL++F ++ EG + VL ACA L +L GK I
Sbjct: 248 KKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQI 307
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGF-AMHXX 301
H G V V L+D Y+KC E CR F +RE VSWS++I G+ M
Sbjct: 308 HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF 367
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF--TIMRRDYGIVPGVEH 359
++ N T+ + ACS + + G + I R G
Sbjct: 368 EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG-----SQ 422
Query: 360 YG--CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSE 417
YG L+ + S+ G L++A EV +M P+ V W A + G + N A EA+R +
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGN---ASEALRLFEK 478
Query: 418 L 418
+
Sbjct: 479 M 479
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 14/299 (4%)
Query: 132 LYASCGET---SHARLMFDKM----PQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRN 184
L+ +C E SH RL+ D+M V N ++ + A LFD M N
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148
Query: 185 VRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHR 244
S T++IS A+ G+ ++A+ +FS M G +P +L + L+FG+ IH
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208
Query: 245 FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXX 304
G N + +++MYVKCG L RVFD M + V+ + ++VG+
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 305 XXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLV 364
++ G++ + F VL AC+ + ++ G++ + + G+ V LV
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK-LGLESEVSVGTPLV 327
Query: 365 DLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG-CRLHKNIKLAEEAMRHLSELDPLN 422
D + E A + PN V W A++ G C++ + EEA++ L N
Sbjct: 328 DFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQMSQ----FEEAVKTFKSLRSKN 381
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
Query: 203 EALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALI 262
EA EM++ G + + + AC +L L G+ +H +V + N ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 263 DMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHV 322
MY +C LE+ ++FD M E VS ++MI +A M+ SG KP
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 323 TFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 382
+ +L + + +D GR+ + R G+ +V++ + G L A+ V
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIR-AGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 383 MSVPPNGVVWGALLG 397
M+V G ++G
Sbjct: 245 MAVKKPVACTGLMVG 259
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 284/545 (52%), Gaps = 43/545 (7%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
IV WN + +A G D F ++ Q + PD T LL A S I+ GR IH
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIH 353
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
Y + GF +++L+ L+ +Y CG+ A ++FD+
Sbjct: 354 GYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDR----------------------- 390
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
M +NV SW S+I+ + G + AL +F E+ P+ T+ ++L A A
Sbjct: 391 --------MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+ L G+ IH + + + N + N+L+ MY CG LE+ + F+ + + VVSW+S
Sbjct: 443 ESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNS 502
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
+I+ +A+H MI S + PN TF +L ACS G+VD+G E+F M+R+Y
Sbjct: 503 IIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREY 562
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
GI PG+EHYGC++DL+ R G A+ + M P +WG+LL R HK+I +AE A
Sbjct: 563 GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFA 622
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
+ +++ N G YV++ N+YAEAG+WE+V+RI+ M+S+G+ +T S++ G H
Sbjct: 623 AEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHV 682
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKG----YIPDTSVVLLDMEDEQKEIFLYRHSEK 527
F GD +H I+E+ L V +M G Y+ S + + + + RHS +
Sbjct: 683 FTNGDRSHVATNKIYEV---LDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVR 739
Query: 528 LALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACT 587
LA +GLI+T+ G + + N R+C CH L+ S + REIVV D FH F NG C+
Sbjct: 740 LATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCS 799
Query: 588 CKDYW 592
C +YW
Sbjct: 800 CGNYW 804
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 56/426 (13%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WN +K F G + + + R+ + D FT F++K+ S + G+ IHA V
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
KLGF S++ + N L+ LY G A +F++MP++D+ +WN MI ++ GD
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGD------ 211
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
G S +L +F EM + G +P+ + ++ L AC+ +
Sbjct: 212 -----------------------GFS--SLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 236 LEFGKSIH------RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
+ GK IH R G +V V +++DMY K G + R+F+GM +R +V+W
Sbjct: 247 PKMGKEIHCHAVRSRIETG-----DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI-M 347
+ MI +A + M ++G++P+ +T I +L A + + +GR M
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAM 357
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
RR G +P + L+D+ G+L+ A EVI + N + W +++ +
Sbjct: 358 RR--GFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Query: 408 AEEAMRHLSELDPLNDGYYVV-MSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITID 466
A E + L + + D + + YAE+ E R + + VK ++I ++
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSE----GREIHAYIVKSRYWSNTIILN 470
Query: 467 GVVHEF 472
+VH +
Sbjct: 471 SLVHMY 476
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A LFD M + + W +I G CG+ EA++ +S M G + + T V+ + A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ LE GK IH GF+ +VYVCN+LI +Y+K GC + +VF+ M ER +VSW+SM
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G+ M++ G KP+ + + L ACSHV G+E R
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLG 397
V ++D+ S+ G + A + M + N V W ++G
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 188/550 (34%), Positives = 291/550 (52%), Gaps = 41/550 (7%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSI--LPDHFTCSFLLKACTISSDIVTGRI 109
+++ WN+ + F G + F +++ +I PD FT + LLKAC+ + I G+
Sbjct: 172 SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQ 231
Query: 110 IHAYVQKLGFQ--SNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA 167
IH ++ + GF S+ + L+ LY CG +L SA
Sbjct: 232 IHGFLVRSGFHCPSSATITGSLVDLYVKCG-------------------------YLFSA 266
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
R FD + + + SW+S+I G A+ G EA+ +F ++ S+ + + +++
Sbjct: 267 ------RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
A L GK + A V N+++DMY+KCG ++E + F M+ + V+
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVI 380
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
SW+ +I G+ H M+R ++P+ V ++ VL ACSH G++ +G E F+ +
Sbjct: 381 SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
+GI P VEHY C+VDLL RAGRL+EA+ +I M + PN +W LL CR+H +I+L
Sbjct: 441 LETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 408 AEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
+E + L +D N YV+MSN+Y +AG W E R +G+KK G S + I+
Sbjct: 501 GKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIER 560
Query: 468 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK-GYIPDTSVVLLDMEDEQKEIFLYRHSE 526
VH F +G+++HP I E ++ +++ + GY+ L D++DE KE L HSE
Sbjct: 561 EVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSE 620
Query: 527 K----LALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFK 582
K LAL G +N K G IR+ KNLRVC DCH +K +S+I VVRD RFH F+
Sbjct: 621 KLAIGLALATGGLNQK-GKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFE 679
Query: 583 NGACTCKDYW 592
+G C+C DYW
Sbjct: 680 DGCCSCGDYW 689
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 184/419 (43%), Gaps = 48/419 (11%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
+L+ CT G +H Y+ K G NLI N L+ +Y C E LM
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREP----LM-------- 59
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
A +FDSMP RNV SW++++SG G + +L +FSEM R
Sbjct: 60 -------------------AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR 100
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
+G PNE T L AC L LE G IH F GF V V N+L+DMY KCG + E
Sbjct: 101 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 160
Query: 274 GCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMK--PNHVTFIGVLHAC 331
+VF + +R+++SW++MI GF M + +K P+ T +L AC
Sbjct: 161 AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKAC 220
Query: 332 SHVGLVDKGREFFTIMRRDYGIVPGVEHY-GCLVDLLSRAGRLEEAREVIANMSVPPNGV 390
S G++ G++ + R P G LVDL + G L AR+ + +
Sbjct: 221 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMI 279
Query: 391 VWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYV-VMSNVYAEAGKWEEVSRIRRSM 449
W +L+ G A + L EL+ D + + + V+A+ + R + M
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFA----LLRQGKQM 335
Query: 450 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 508
++ VK G + ++ VV ++ G+ + EK +M++K I T V+
Sbjct: 336 QALAVKLPSGLETSVLNSVVDMYLKC--------GLVDEAEKCFAEMQLKDVISWTVVI 386
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 179/386 (46%), Gaps = 43/386 (11%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W++ + G ++SLF + + I P+ FT S LKAC + + + G IH
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K+GF+ + + N L+ +Y+ CG + A +F ++ + + +WN MI + AG
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A D F M N++ RP+E T+ ++L AC+
Sbjct: 192 ALDTFGMMQEANIK-----------------------------ERPDEFTLTSLLKACSS 222
Query: 233 LGDLEFGKSIHRFAEGNGF--LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
G + GK IH F +GF + + +L+D+YVKCG L + FD ++E+T++SWS
Sbjct: 223 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 282
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S+I+G+A + + + ++ + L+ +G++ + +
Sbjct: 283 SLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK- 341
Query: 351 YGIVPGVEH--YGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH----KN 404
+ G+E +VD+ + G ++EA + A M + + + W ++ G H K+
Sbjct: 342 --LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYGKHGLGKKS 398
Query: 405 IKLAEEAMRHLSELDPLNDGYYVVMS 430
+++ E +RH ++P Y V+S
Sbjct: 399 VRIFYEMLRH--NIEPDEVCYLAVLS 422
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 3/182 (1%)
Query: 218 PNE-VTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCR 276
PN+ +V++L C + G + G +H + +G N+ N LIDMY KC +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 277 VFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGL 336
VFD M ER VVSWS+++ G ++ M R G+ PN TF L AC +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 337 VDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
++KG + + G VE LVD+ S+ GR+ EA +V + V + + W A++
Sbjct: 123 LEKGLQIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMI 180
Query: 397 GG 398
G
Sbjct: 181 AG 182
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 253/471 (53%), Gaps = 39/471 (8%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WNS K ++ G D L+ + + PD T L +C + GR+IH+
Sbjct: 221 VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHS 280
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ LG QD+ N I + D +
Sbjct: 281 HAIHLG-------------------------------TDQDIEAINTFISMYSKSEDTCS 309
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
AR LFD M R SWT +ISG A+ G +EAL +F M + G +P+ VT+++++ C +
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 233 LGDLEFGKSIHRFAEGNGFLR-NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
G LE GK I A+ G R NV +CNALIDMY KCG + E +FD E+TVV+W++
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI G+A++ MI KPNH+TF+ VL AC+H G ++KG E+F IM++ Y
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
I PG++HY C+VDLL R G+LEEA E+I NMS P+ +WGALL C++H+N+K+AE+A
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
L L+P YV M+N+YA AG W+ +RIR MK R +KK PG S I ++G H
Sbjct: 550 AESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHS 609
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQK-EIFL 521
F G+ H + + I+ L + + D V+ D+ EQ E+F+
Sbjct: 610 FTVGEHGHVENEVIYFTLNGLSL------FAKDKHVLYKDVYKEQSYELFI 654
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 159/381 (41%), Gaps = 61/381 (16%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WN+ L F + G SLF +R I PD T L+++ + + +HA
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
+LG + + N + Y CG+ A+L+F+ + + D
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD---------------------- 218
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
R V SW S+ + G + +A ++ M RE +P+ T + + +C
Sbjct: 219 -------RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPET 271
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCR---VFDGMRERTVVSWSSM 292
L G+ IH A G +++ N I MY K E+ C +FD M RT VSW+ M
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS---EDTCSARLLFDIMTSRTCVSWTVM 328
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G+A MI+SG KP+ VT + ++ C G ++ G+
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK----------W 378
Query: 353 IVPGVEHYGC----------LVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGGCRL 401
I + YGC L+D+ S+ G + EAR++ N P VV W ++ G L
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN--TPEKTVVTWTTMIAGYAL 436
Query: 402 HKNIKLAEEAMRHLSELDPLN 422
+ + EA++ S++ L+
Sbjct: 437 N---GIFLEALKLFSKMIDLD 454
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 136/297 (45%), Gaps = 33/297 (11%)
Query: 47 LAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVT 106
++ + ++ WN ++ R P +++ LF +++ P++FT F+ KAC +D+
Sbjct: 11 ISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGC 70
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
++HA++ K F S++ + + ++ C +A +F++M
Sbjct: 71 CEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERM----------------- 113
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
P R+ +W +++SG + G +++A +F EM P+ VTV+ +
Sbjct: 114 --------------PERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTL 159
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR--ER 284
+ + + L+ +++H G V V N I Y KCG L+ VF+ + +R
Sbjct: 160 IQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDR 219
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGR 341
TVVSW+SM +++ M+R KP+ TFI + +C + + +GR
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 263/456 (57%), Gaps = 12/456 (2%)
Query: 20 HATSQNHHLKQARALL---IKTNAPLSHVDLA-----HV--PAIVPWNSCLKFFAERGAP 69
HA H L + LL I LS+ D A H+ P ++ +N+ +K ++ G P
Sbjct: 24 HAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPP 83
Query: 70 CDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNML 129
+++S F ++ I D +T + LLK+C+ SD+ G+ +H + + GF ++ +
Sbjct: 84 LESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGV 143
Query: 130 LHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWT 189
+ LY S G A+ +FD+M +++V WN+MI +GDV LF M R++ SW
Sbjct: 144 VELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWN 203
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
S+IS L+KCG EAL +F EM +G P+E TVV VL A LG L+ GK IH AE +
Sbjct: 204 SMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESS 263
Query: 250 GFLRN-VYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX 308
G ++ + V NAL+D Y K G LE +F M+ R VVSW+++I G A++
Sbjct: 264 GLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDL 323
Query: 309 XXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLL 367
MI G + PN TF+GVL CS+ G V++G E F +M + + EHYG +VDL+
Sbjct: 324 FDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLM 383
Query: 368 SRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYV 427
SR+GR+ EA + + NM V N +WG+LL CR H ++KLAE A L +++P N G YV
Sbjct: 384 SRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYV 443
Query: 428 VMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
++SN+YAE G+W++V ++R MK ++K+ G S+I
Sbjct: 444 LLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/439 (37%), Positives = 257/439 (58%), Gaps = 4/439 (0%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P WN ++ F+ P +IS+++++ + +LPDH T FL+K+ + S+ G +
Sbjct: 71 PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL 130
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H V K G + +L + N L+H+Y S + + AR +FD+MP +++ TWN ++ +GDV
Sbjct: 131 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDV 190
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVA 229
+AR +FD M R+V +W+S+I G K G +AL +F +M R GS + NEVT+V+V+ A
Sbjct: 191 VSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICA 250
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVF--DGMRERTVV 287
CA LG L GK++HR+ V + +LIDMY KCG + + VF ++E +
Sbjct: 251 CAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDAL 310
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
W+++I G A H M S + P+ +TF+ +L ACSH GLV + FF +
Sbjct: 311 MWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL 370
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
+ G P EHY C+VD+LSRAG +++A + I+ M + P G + GALL GC H N++L
Sbjct: 371 KES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLEL 429
Query: 408 AEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
AE + L EL P NDG YV ++NVYA ++ +R +M+ +GVKK G S + +DG
Sbjct: 430 AETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDG 489
Query: 468 VVHEFVAGDETHPQAKGIF 486
H F+A D+TH + I+
Sbjct: 490 TRHRFIAHDKTHFHSDKIY 508
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 167/379 (44%), Gaps = 44/379 (11%)
Query: 117 LGFQSNLILQNMLLHLYASCGETS--HARLMFDKMPQQD-VATWNIMIGHLISAGDVGAA 173
L S+L+ +++L H S E H L+ + +++ + + L S+GDV A
Sbjct: 2 LKSSSSLVAKSILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYA 61
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
+ W VI G + E+++ V+ +M R G P+ +T ++ + ++L
Sbjct: 62 YKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRL 121
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALI------------------------------- 262
+ + G S+H +G ++++CN LI
Sbjct: 122 SNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSIL 181
Query: 263 DMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG-MKPNH 321
D Y K G + VFD M ER VV+WSSMI G+ M+R G K N
Sbjct: 182 DAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANE 241
Query: 322 VTFIGVLHACSHVGLVDKGREFFTIMRR--DYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
VT + V+ AC+H+G +++G+ T+ R D + V L+D+ ++ G + +A V
Sbjct: 242 VTMVSVICACAHLGALNRGK---TVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSV 298
Query: 380 IANMSVP-PNGVVWGALLGGCRLHKNIKLAEEAMRHL--SELDPLNDGYYVVMSNVYAEA 436
SV + ++W A++GG H I+ + + + S++DP ++ ++ + +
Sbjct: 299 FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDP-DEITFLCLLAACSHG 357
Query: 437 GKWEEVSRIRRSMKSRGVK 455
G +E +S+K G +
Sbjct: 358 GLVKEAWHFFKSLKESGAE 376
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 183/500 (36%), Positives = 266/500 (53%), Gaps = 25/500 (5%)
Query: 18 LDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAI-----------------------V 54
+D S LKQ A LIKT V + V A
Sbjct: 31 IDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPF 90
Query: 55 PWNSCLKFFAERGAPCDTISLFLRL--RQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
WN+ ++ F+ P IS+F+ + S+ P T + KA GR +H
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V K G + + ++N +LH+Y +CG A +F M DV WN MI G +
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A++LFD MP+RN SW S+ISG + G ++AL +F EM+ + +P+ T+V++L ACA
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
LG E G+ IH + N F N V ALIDMY KCGC+EEG VF+ ++ + W+SM
Sbjct: 271 LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSM 330
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I+G A + + RSG++P+ V+FIGVL AC+H G V + EFF +M+ Y
Sbjct: 331 ILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYM 390
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
I P ++HY +V++L AG LEEA +I NM V + V+W +LL CR N+++A+ A
Sbjct: 391 IEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAA 450
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
+ L +LDP YV++SN YA G +EE R MK R ++K GCSSI +D VHEF
Sbjct: 451 KCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEF 510
Query: 473 VAGDETHPQAKGIFEMWEKL 492
++ THP++ I+ + + L
Sbjct: 511 ISCGGTHPKSAEIYSLLDIL 530
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 264/455 (58%), Gaps = 6/455 (1%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P + +N + +A++G + + L+ ++ I PD +T LL C SDI G+ +
Sbjct: 195 PDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGV 254
Query: 111 HAYVQKLG--FQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
H ++++ G + SNLIL N LL +Y C E+ A+ FD M ++D+ +WN M+ + G
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLG 314
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALR-VFSEME-REGSRPNEVTVVAV 226
D+ AA+ +FD MP+R++ SW S++ G +K G + +R +F EM E +P+ VT+V++
Sbjct: 315 DMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSL 374
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
+ A G+L G+ +H + ++ +ALIDMY KCG +E VF E+ V
Sbjct: 375 ISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDV 434
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
W+SMI G A H M G+ PN+VT + VL ACSH GLV++G F
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH 494
Query: 347 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA-NMSVPPNGVVWGALLGGCRLHKNI 405
M+ +G P EHYG LVDLL RAGR+EEA++++ M + P+ +WG++L CR ++I
Sbjct: 495 MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDI 554
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
+ AE A+ L +L+P +G YV++SN+YA G+W + R +M++RGVKKT G SS+
Sbjct: 555 ETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVG 614
Query: 466 DGVVHEFVAGD-ETHPQAKGIFEMWEKLLVKMKMK 499
+H FVA + + HP+ I + + L +MK K
Sbjct: 615 VEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPK 649
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 134/302 (44%), Gaps = 49/302 (16%)
Query: 157 WNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS 216
WN ++ + G+ G A +F MP +V S+ +I G AK G S EAL+++ +M +G
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 217 RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNG--FLRNVYVCNALIDMYVKCGCLEEG 274
P+E TV+++LV C L D+ GK +H + E G + N+ + NAL+DMY KC
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 275 CRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM---------------------- 312
R FD M+++ + SW++M+VGF M
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 313 -----------IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
I +KP+ VT + ++ ++ G + GR +G+V ++ G
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV-------HGLVIRLQLKG 401
Query: 362 ------CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHL 415
L+D+ + G +E A V + + +W +++ G H N + A + +
Sbjct: 402 DAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGNGQQALQLFGRM 460
Query: 416 SE 417
E
Sbjct: 461 QE 462
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 169 DVGAARDLF-DSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
++ A+ LF + P NV + ++IS ++ E ++S M R P+ T + ++
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLM 140
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLR-NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
A + L ++ K IH +G L Y+ N+L+ Y++ G +VF M V
Sbjct: 141 KASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDV 197
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGR 341
S++ MIVG+A M+ G++P+ T + +L C H+ + G+
Sbjct: 198 SSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 311 bits (797), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 259/472 (54%), Gaps = 39/472 (8%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P + N L+ A+ P T+SL+ + + + PD +T +F+LKAC+ G
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGE-------------------------------T 139
H V + GF N ++N L+ +A+CG+
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 140 SHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCG 199
A +FD+MP +D WN+MI + ++ +AR+LFD ++V +W ++ISG CG
Sbjct: 195 DEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCG 254
Query: 200 MSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA-EGNGFLRNVYV- 257
+EAL +F EM G P+ VT++++L ACA LGDLE GK +H + E ++YV
Sbjct: 255 YPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVG 314
Query: 258 ---CNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 314
NALIDMY KCG ++ VF G+++R + +W+++IVG A+H M R
Sbjct: 315 TPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSIEMFEE-MQR 373
Query: 315 SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 374
+ PN VTFIGV+ ACSH G VD+GR++F++MR Y I P ++HYGC+VD+L RAG+LE
Sbjct: 374 LKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLE 433
Query: 375 EAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYA 434
EA + +M + PN +VW LLG C+++ N++L + A L + G YV++SN+YA
Sbjct: 434 EAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYA 493
Query: 435 EAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG--VVHEFVAGDETHPQAKG 484
G+W+ V ++R+ VKK G S I D ++ ++ E +++G
Sbjct: 494 STGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESRSRG 545
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 24/308 (7%)
Query: 160 MIGHLISA------GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
++G LI + G + A LFD +P+ +V V+ G A+ E+ + +++EME+
Sbjct: 46 VVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEK 105
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
G P+ T VL AC++L G + H +GF+ N YV NALI + CG L
Sbjct: 106 RGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGI 165
Query: 274 GCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSH 333
+FD + V+WSSM G+A M + V + ++ C
Sbjct: 166 ASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLK 221
Query: 334 VGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP---PNGV 390
+D RE F D V + ++ G +EA + M P+ V
Sbjct: 222 CKEMDSARELF-----DRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVV 276
Query: 391 VWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYV------VMSNVYAEAGKWEEVSR 444
+LL C + +++ + ++ E ++ YV + ++YA+ G +
Sbjct: 277 TILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIE 336
Query: 445 IRRSMKSR 452
+ R +K R
Sbjct: 337 VFRGVKDR 344
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 247/452 (54%), Gaps = 32/452 (7%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V + + + + G D++ +F L ++ I P+ T +L I + GR +H
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
++ K GF + + ++ +YA CG +
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGR-------------------------------MNL 494
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A ++F+ + +R++ SW S+I+ A+ A+ +F +M G + V++ A L ACA
Sbjct: 495 AYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L FGK+IH F + +VY + LIDMY KCG L+ VF M+E+ +VSW+S+
Sbjct: 555 LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSI 614
Query: 293 IVGFAMHXXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
I H M+ +SG++P+ +TF+ ++ +C HVG VD+G FF M DY
Sbjct: 615 IAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDY 674
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
GI P EHY C+VDL RAGRL EA E + +M PP+ VWG LLG CRLHKN++LAE A
Sbjct: 675 GIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVA 734
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
L +LDP N GYYV++SN +A A +WE V+++R MK R V+K PG S I I+ H
Sbjct: 735 SSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHL 794
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIP 503
FV+GD HP++ I+ + LL +++++GYIP
Sbjct: 795 FVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 151/353 (42%), Gaps = 33/353 (9%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WN + + + G ++++ F + +LPD T S LL + + ++ + IH Y
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCY 365
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ + ++ L + L+ Y C S A+ +F + DV +
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF---------------- 409
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
T++ISG G+ ++L +F + + PNE+T+V++L L
Sbjct: 410 ---------------TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
L+ G+ +H F GF + A+IDMY KCG + +F+ + +R +VSW+SMI
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
A M SG+ + V+ L AC+++ G+ M + + +
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSL 573
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK 406
V L+D+ ++ G L+ A V M N V W +++ C H +K
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLK 625
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 158/383 (41%), Gaps = 41/383 (10%)
Query: 37 KTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLK 96
K + P D V WN L +A+ GA I F +R I P+ T +L
Sbjct: 188 KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS 247
Query: 97 ACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVAT 156
C I G +H V G ++N LL +Y+ CG FD
Sbjct: 248 VCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR-------FDD-------- 292
Query: 157 WNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS 216
A LF M R + +W +ISG + G+ EE+L F EM G
Sbjct: 293 ----------------ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 217 RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCR 276
P+ +T ++L + ++ +LE+ K IH + + ++++ +ALID Y KC +
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 277 VFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGL 336
+F VV +++MI G+ + +++ + PN +T + +L +
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 337 VDKGREFFTIMRRDYGIVPGVE---HYGC-LVDLLSRAGRLEEAREVIANMSVPPNGVVW 392
+ GRE + I G + + GC ++D+ ++ GR+ A E+ +S + V W
Sbjct: 457 LKLGREL-----HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSW 510
Query: 393 GALLGGCRLHKNIKLAEEAMRHL 415
+++ C N A + R +
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQM 533
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 113/281 (40%), Gaps = 31/281 (11%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+I PWNS + F G ++ + ++ + PD T L+KAC + +
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
V LG N + + L+ Y G+ +FD++ Q+D
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVI--------------- 206
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
W +++G AKCG + ++ FS M + PN VT VL CA
Sbjct: 207 ----------------WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
++ G +H +G + N+L+ MY KCG ++ ++F M V+W+
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
MI G+ MI SG+ P+ +TF +L + S
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 156/381 (40%), Gaps = 56/381 (14%)
Query: 42 LSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTIS 101
+S V PAI P+ L P S FL +P S LL+AC+
Sbjct: 3 ISSVAKRFAPAIAPYKKSL--------PLRNSSRFLE----ETIPRRL--SLLLQACSNP 48
Query: 102 SDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMI 161
+ + G+ +HA++ + +L +YA CG S MF ++
Sbjct: 49 NLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRL------------ 96
Query: 162 GHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
+ R ++R W S+IS + G+ +AL + +M G P+
Sbjct: 97 -----------------DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
T ++ AC L + + + G N +V ++LI Y++ G ++ ++FD +
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 282 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGR 341
++ V W+ M+ G+A M + PN VTF VL C+ L+D G
Sbjct: 200 LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 342 EFFTIMRRDYGIVPGVEHYG----CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLG 397
+ ++ +V GV+ G L+ + S+ GR ++A ++ MS + V W ++
Sbjct: 260 QLHGLV-----VVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMIS 313
Query: 398 GCRLHKNIKLAEEAMRHLSEL 418
G + L EE++ E+
Sbjct: 314 G---YVQSGLMEESLTFFYEM 331
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 233/398 (58%), Gaps = 11/398 (2%)
Query: 75 LFLRLRQLSILPDHFTCSFLLKACTI--SSDIVTGRIIHAYVQKLGFQSNLILQNMLLHL 132
F+ +R+ S+ PD T F+ KAC + D+ + +H + G S+L N L+ +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 133 YASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVI 192
Y+ A +FD+ PQ+DV T+N++I L+ A ++ AR+LFDSMP R++ SW S+I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 193 SGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFL 252
SG A+ EA+++F EM G +P+ V +V+ L ACAQ GD + GK+IH + +
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 253 RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 312
+ ++ L+D Y KCG ++ +F+ ++T+ +W++MI G AMH M
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 313 IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGR 372
+ SG+KP+ VTFI VL CSH GLVD+ R F MR Y + ++HYGC+ DLL RAG
Sbjct: 342 VSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGL 401
Query: 373 LEEAREVIANMSVPPNG------VVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYY 426
+EEA E+I M P +G + W LLGGCR+H NI++AE+A + L P + G Y
Sbjct: 402 IEEAAEMIEQM--PKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVY 459
Query: 427 VVMSNVYAEAGKWEEVSRIRRSM-KSRGVKKTPGCSSI 463
VM +YA A +WEEV ++R + + + VKK G S +
Sbjct: 460 KVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 49/259 (18%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WNS + +A+ + I LF + L + PD+ L AC S D G+ IH
Sbjct: 214 LVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHD 273
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y ++ + L L+ YA CG A +F+ + + TWN M
Sbjct: 274 YTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM------------ 321
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
I+GLA G E + F +M G +P+ VT ++VLV C+
Sbjct: 322 -------------------ITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSH 362
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCN-------ALIDMYVKCGCLEEGCRVF-----DG 280
G ++ +++ F + +R++Y N + D+ + G +EE + DG
Sbjct: 363 SGLVDEARNL--FDQ----MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
Query: 281 MRERTVVSWSSMIVGFAMH 299
+++WS ++ G +H
Sbjct: 417 GNREKLLAWSGLLGGCRIH 435
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 163/451 (36%), Positives = 251/451 (55%), Gaps = 1/451 (0%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRIIH 111
+V WNS + +++ G+ D ++ + S P+ T + +AC SSD++ G +H
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+ + Q +L L N ++ YA CG +AR +FD+M ++D T+ +I ++ G V
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
A LF M + +W ++ISGL + EE + F EM R GSRPN VT+ ++L +
Sbjct: 318 EAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLT 377
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+L+ GK IH FA NG N+YV ++ID Y K G L RVFD ++R++++W++
Sbjct: 378 YSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTA 437
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
+I +A+H M G KP+ VT VL A +H G D + F M Y
Sbjct: 438 IITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKY 497
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
I PGVEHY C+V +LSRAG+L +A E I+ M + P VWGALL G + ++++A A
Sbjct: 498 DIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFA 557
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
L E++P N G Y +M+N+Y +AG+WEE +R MK G+KK PG S I + +
Sbjct: 558 CDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRS 617
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 502
F+A D + ++K ++E+ E L+ M K YI
Sbjct: 618 FIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 154/375 (41%), Gaps = 59/375 (15%)
Query: 55 PWNSCLKFFAERGAPCDTISLFLR------LRQLSILPDHFTCSFLLKACTISSDIVTG- 107
+N+ L + R D SLFL + PD + S +LKA + D G
Sbjct: 90 SYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGS 149
Query: 108 --RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
R +H +V + GF S++ + N ++ Y C AR +FD+M ++DV +WN
Sbjct: 150 LARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWN------- 202
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER-EGSRPNEVTVV 224
S+ISG ++ G E+ +++ M +PN VTV+
Sbjct: 203 ------------------------SMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVI 238
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER 284
+V AC Q DL FG +H+ N ++ +CNA+I Y KCG L+ +FD M E+
Sbjct: 239 SVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK 298
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
V++ ++I G+ H M G+ + G++ H +++ RE
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMI 358
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA-------------NMSVPPNGVV 391
R P L+ L+ + L+ +E+ A S+ N
Sbjct: 359 RCGSR-----PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 392 WGALLGGCRLHKNIK 406
G LLG R+ N K
Sbjct: 414 LGFLLGAQRVFDNCK 428
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 15/284 (5%)
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVF------SEMEREGSRPNEVTVVAVLVA 229
+FD + RN S+ +++ M +A +F S + +RP+ +++ VL A
Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKA 138
Query: 230 CAQLGDLEFG---KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
+ D G + +H F GF +V+V N +I Y KC +E +VFD M ER V
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
VSW+SMI G++ M+ S KPN VT I V AC + G E
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
M ++ I + ++ ++ G L+ AR + MS + V +GA++ G H
Sbjct: 259 KMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAH--- 313
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSM 449
L +EAM SE++ + + M + + EEV R M
Sbjct: 314 GLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREM 357
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 276/537 (51%), Gaps = 77/537 (14%)
Query: 27 HLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILP 86
++ ARALL + V +V WNS + +G + +S+F R+ + +
Sbjct: 277 EMESARALL----------EGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKI 326
Query: 87 DHFTCSFLLKACTIS-SDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLM 145
D FT +L +S +++ H + K G+ + ++ N L+ +YA
Sbjct: 327 DDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAK---------- 376
Query: 146 FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL 205
G + +A +F+ M ++V SWT++++G G +EAL
Sbjct: 377 ---------------------RGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415
Query: 206 RVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMY 265
++F M G P+++ +VL A A+L LEFG+ +H +GF ++ V N+L+ MY
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMY 475
Query: 266 VKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFI 325
KCG LE+ +F+ M R +++W+ +IVG+A +
Sbjct: 476 TKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN-------------------------- 509
Query: 326 GVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 385
GL++ + +F MR YGI PG EHY C++DL R+G + +++ M V
Sbjct: 510 ---------GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEV 560
Query: 386 PPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRI 445
P+ VW A+L R H NI+ E A + L EL+P N YV +SN+Y+ AG+ +E + +
Sbjct: 561 EPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANV 620
Query: 446 RRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 505
RR MKSR + K PGCS + G VH F++ D HP+ I+ +++++ +K GY D
Sbjct: 621 RRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADM 680
Query: 506 SVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLV 562
S L D++ E KE+ L HSEKLA+ +GL+ G PIRI+KNLRVC DCH+A+KL+
Sbjct: 681 SFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 147/294 (50%), Gaps = 8/294 (2%)
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
G IH+Y + SNL+L ++ + G AR MFDKMP++D TWN MI +
Sbjct: 17 GSCIHSYADRTKLHSNLLLGDL-----SKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
+ + A LF S P +N SW ++ISG K G EA +F EM+ +G +PNE T+ +V
Sbjct: 72 SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR-ERT 285
L C L L G+ IH GF +V V N L+ MY +C + E +F+ M E+
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
V+W+SM+ G++ + + R G + N TF VL AC+ V G +
Sbjct: 192 NVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHC 251
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
+ + G + L+D+ ++ +E AR ++ M V + V W +++ GC
Sbjct: 252 CIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEV-DDVVSWNSMIVGC 303
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 35/351 (9%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
V + WN+ + + + G+ + +LF ++ I P+ +T +L+ CT ++ G
Sbjct: 87 VKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQ 146
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
IH + K GF ++ + N LL +YA C S A +F+ M +
Sbjct: 147 IHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGE----------------- 189
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+N +WTS+++G ++ G + +A+ F ++ REG++ N+ T +VL A
Sbjct: 190 -------------KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTA 236
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
CA + G +H +GF N+YV +ALIDMY KC +E + +GM VVSW
Sbjct: 237 CASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSW 296
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLH--ACSHVGLVDKGREFFTIM 347
+SMIVG M MK + T +L+ A S + I+
Sbjct: 297 NSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIV 356
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ Y V + LVD+ ++ G ++ A +V M + + + W AL+ G
Sbjct: 357 KTGYATYKLVNN--ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 176/404 (43%), Gaps = 44/404 (10%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W S L +++ G I F LR+ + +T +L AC S G +H
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCC 252
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ K GF++N+ +Q+ L+ +YA C E AR + + M DV +WN MI VG
Sbjct: 253 IVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMI--------VGCV 304
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
R G+ EAL +F M + ++ T+ ++L C L
Sbjct: 305 RQ-----------------------GLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFAL 340
Query: 234 G--DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+++ S H G+ V NAL+DMY K G ++ +VF+GM E+ V+SW++
Sbjct: 341 SRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTA 400
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
++ G + M G+ P+ + VL A + + L++ G++ +
Sbjct: 401 LVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKS- 459
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G + LV + ++ G LE+A + +M + + + W L+ G + L E+A
Sbjct: 460 GFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEI-RDLITWTCLIVG---YAKNGLLEDA 515
Query: 412 MRHLSELDPL-----NDGYYVVMSNVYAEAGKWEEVSRIRRSMK 450
R+ + + +Y M +++ +G + +V ++ M+
Sbjct: 516 QRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQME 559
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 271/510 (53%), Gaps = 67/510 (13%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
NS +K + E D+ +L+ LR+ + PD+FT + L K+C++S + G +H+ +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQ------------------------ 151
+ GF +++ + ++ +YA G+ AR FD+MP
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 152 --------QDVATWNIMIGHLISAGDVGAAR----------------------------- 174
+DV +N M+ + +GD+ +AR
Sbjct: 166 LFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDA 225
Query: 175 --DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVACA 231
LFD+MP RN+ SW ++I G + +E +R+F EM+ S P++VT+++VL A +
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
G L G+ H F + + V VC A++DMY KCG +E+ R+FD M E+ V SW++
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI G+A++ M+ KP+ +T + V+ AC+H GLV++GR++F +M R+
Sbjct: 346 MIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVM-REM 403
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G+ +EHYGC+VDLL RAG L+EA ++I NM PNG++ + L C +K+I+ AE
Sbjct: 404 GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERI 463
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
++ EL+P NDG YV++ N+YA +W++ ++ M+ KK GCS I I+ +V E
Sbjct: 464 LKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSE 523
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGY 501
F++GD THP + I + LL+ M + Y
Sbjct: 524 FISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 33/223 (14%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRIIH 111
+V WN+ + + + P + I LF ++ + L PD T +L A + + + G H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+VQ+ + + +L +Y+ CGE A+ +FD+MP++ VA+WN MI G+
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAR 357
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
AA DLF +M M EE +P+E+T++AV+ AC
Sbjct: 358 AALDLFVTM-------------------MIEE-------------KPDEITMLAVITACN 385
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEG 274
G +E G+ G + ++D+ + G L+E
Sbjct: 386 HGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEA 428
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 166 SAGDVGAARDLFDSMPRRNVRSWT-SVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTV 223
SA +G AR LFD P+R+ + S+I + ++ ++ ++ +E P+ T
Sbjct: 22 SAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTF 81
Query: 224 VAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE 283
+ +C+ + G +H GF ++YV ++DMY K G + FD M
Sbjct: 82 TTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPH 141
Query: 284 RTVVSWSSMIVGF 296
R+ VSW+++I G+
Sbjct: 142 RSEVSWTALISGY 154
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 232/392 (59%), Gaps = 6/392 (1%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
++ ++ D+V+ R L + +++L N ++ Y G AR +FD+MP +D
Sbjct: 65 MINGYLLNKDLVSARRYF----DLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRD 120
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
V +WN ++ + GD+ A +FD MP RNV SW +I G A+ G E L F M
Sbjct: 121 VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD 180
Query: 214 EGSR-PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLR-NVYVCNALIDMYVKCGCL 271
EGS PN+ T+ VL ACA+LG +FGK +H++ E G+ + +V V NALIDMY KCG +
Sbjct: 181 EGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAI 240
Query: 272 EEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHAC 331
E VF G++ R ++SW++MI G A H M SG+ P+ VTF+GVL AC
Sbjct: 241 EIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
Query: 332 SHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV 391
H+GLV+ G +F M D+ I+P +EH GC+VDLLSRAG L +A E I M V + V+
Sbjct: 301 KHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVI 360
Query: 392 WGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKS 451
W LLG +++K + + E A+ L +L+P N +V++SN+Y +AG++++ +R++ +M+
Sbjct: 361 WATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRD 420
Query: 452 RGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 483
G KK G S I D + +F + E HP+ +
Sbjct: 421 TGFKKEAGVSWIETDDGLVKFYSSGEKHPRTE 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+ WN +K +A+ G + + F R+ + S++P+ T + +L AC G+ +H
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 112 AYVQKLGFQS-NLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
Y + LG+ ++ ++N L+ +Y CG A +F + ++D+ +WN M
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTM---------- 261
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
I+GLA G EAL +F EM+ G P++VT V VL AC
Sbjct: 262 ---------------------INGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
Query: 231 AQLGDLEFGKS-IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT-VVS 288
+G +E G + + + + C ++D+ + G L + + M + V
Sbjct: 301 KHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVI 360
Query: 289 WSSMI 293
W++++
Sbjct: 361 WATLL 365
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 258/469 (55%), Gaps = 23/469 (4%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WN+ + + G +T+ LF+ + + I PD FT +LKACT S + G IH+
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSS 507
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ K G SN + L+ +Y+ CG A + + Q+ +V
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR---------------ANVSGT 552
Query: 174 RDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+ + M + ++ SW S+ISG SE+A +F+ M G P++ T VL
Sbjct: 553 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 612
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
CA L GK IH +VY+C+ L+DMY KCG L + +F+ R V+W
Sbjct: 613 CANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTW 672
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
++MI G+A H MI +KPNHVTFI +L AC+H+GL+DKG E+F +M+R
Sbjct: 673 NAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK-NIKLA 408
DYG+ P + HY +VD+L ++G+++ A E+I M + V+W LLG C +H+ N+++A
Sbjct: 733 DYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVA 792
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGV 468
EEA L LDP + Y ++SNVYA+AG WE+VS +RR+M+ +KK PGCS + +
Sbjct: 793 EEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDE 852
Query: 469 VHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQK 517
+H F+ GD+ HP+ + I+E E L+ +MK + + V +++E+E +
Sbjct: 853 LHVFLVGDKAHPRWEEIYE--ELGLIYSEMKPFDDSSFVRGVEVEEEDQ 899
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 169/351 (48%), Gaps = 11/351 (3%)
Query: 52 AIVPWNSCL-KFFAERGAPCDTISLFLR-LRQL-SILPDHFTCSFLLKACTISSDIVTGR 108
++V +N CL + + R P + S F L Q+ S+ +F SF+ K C + G+
Sbjct: 13 SVVSFNRCLTEKISYRRVP--SFSYFTDFLNQVNSVSTTNF--SFVFKECAKQGALELGK 68
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
HA++ GF+ + N LL +Y + + A ++FDKMP +DV +WN MI +
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSN 128
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
D+ A F+ MP R+V SW S++SG + G S +++ VF +M REG + T +L
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
C+ L D G IH G +V +AL+DMY K E RVF G+ E+ VS
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT-IM 347
WS++I G + M + + + VL +C+ + + G + +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ D+ G+ L D+ ++ +++A +++ + S N + A++ G
Sbjct: 309 KSDFA-ADGIVRTATL-DMYAKCDNMQDA-QILFDNSENLNRQSYNAMITG 356
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 155/356 (43%), Gaps = 33/356 (9%)
Query: 43 SHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISS 102
S ++ V +V WNS L + + G +I +F+ + + I D T + +LK C+
Sbjct: 135 SFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLE 194
Query: 103 DIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIG 162
D G IH V ++G ++++ + LL +YA ++ V + +
Sbjct: 195 DTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK--------------GKRFVESLRV--- 237
Query: 163 HLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
F +P +N SW+++I+G + + AL+ F EM++ + ++
Sbjct: 238 --------------FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+VL +CA L +L G +H A + F + V A +DMY KC +++ +FD
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
S+++MI G++ ++ SG+ + ++ GV AC+ V + +G +
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ + + + V +D+ + L EA V M + V W A++
Sbjct: 404 IYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 147/327 (44%), Gaps = 35/327 (10%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W++ + + + F +++++ + +L++C S++ G +HA+
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
K F ++ I++ L +YA C A++
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCDNMQDAQI----------------------------- 337
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
LFD+ N +S+ ++I+G ++ +AL +F + G +E+++ V ACA +
Sbjct: 338 --LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALV 395
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
L G I+ A + +V V NA IDMY KC L E RVFD MR R VSW+++I
Sbjct: 396 KGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAII 455
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
+ M+RS ++P+ TF +L AC+ G + G E + + + G+
Sbjct: 456 AAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKS-GM 513
Query: 354 VPGVEHYGC-LVDLLSRAGRLEEAREV 379
GC L+D+ S+ G +EEA ++
Sbjct: 514 ASN-SSVGCSLIDMYSKCGMIEEAEKI 539
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 95/240 (39%), Gaps = 39/240 (16%)
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGF-------------------------------LRN 254
V CA+ G LE GK H +GF LR+
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 255 VYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 314
V N +I+ Y K + + F+ M R VVSW+SM+ G+ + M R
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 315 SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 374
G++ + TF +L CS + G + I+ R G V L+D+ ++ R
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKGKRFV 232
Query: 375 EAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYA 434
E+ V + N V W A++ GC + + L A++ E+ +N G V ++YA
Sbjct: 233 ESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSL---ALKFFKEMQKVNAG---VSQSIYA 285
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 252/458 (55%), Gaps = 34/458 (7%)
Query: 6 STLPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAE 65
S++ P P+ + AT ++ AR I + S + L P WN+ ++ +
Sbjct: 36 SSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRI-LDQYPIAFLWNNIMRSYIR 94
Query: 66 RGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLIL 125
+P D I ++L + + ++LPD ++ ++KA D G+ +H+ +LGF +
Sbjct: 95 HESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFC 154
Query: 126 QNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNV 185
++ + LY GE +AR +FD P R +
Sbjct: 155 ESGFITLYCKAGEFENAR-------------------------------KVFDENPERKL 183
Query: 186 RSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHR- 244
SW ++I GL G + EA+ +F +M+R G P++ T+V+V +C LGDL +H+
Sbjct: 184 GSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKC 243
Query: 245 -FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXX 303
++ + N+LIDMY KCG ++ +F+ MR+R VVSWSSMIVG+A +
Sbjct: 244 VLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTL 303
Query: 304 XXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCL 363
M G++PN +TF+GVL AC H GLV++G+ +F +M+ ++ + PG+ HYGC+
Sbjct: 304 EALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCI 363
Query: 364 VDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLND 423
VDLLSR G+L+EA++V+ M + PN +VWG L+GGC ++++AE ++ EL+P ND
Sbjct: 364 VDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWND 423
Query: 424 GYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
G YVV++NVYA G W++V R+R+ MK++ V K P S
Sbjct: 424 GVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 254/467 (54%), Gaps = 14/467 (2%)
Query: 35 LIKTNAPLSHVDLAH-----VPA--IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILP- 86
L+ A L +++ H +P +V WN + + G D I +F R+ Q S L
Sbjct: 87 LMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKF 146
Query: 87 DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMF 146
D T L AC+ ++ G I+ +V F+ ++ + N L+ ++ CG AR +F
Sbjct: 147 DEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVF 205
Query: 147 DKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALR 206
D M ++V W M+ +S G + AR LF+ P ++V WT++++G + +EAL
Sbjct: 206 DSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE 265
Query: 207 VFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYV 266
+F M+ G RP+ +V++L CAQ G LE GK IH + N + V AL+DMY
Sbjct: 266 LFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYA 325
Query: 267 KCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIG 326
KCGC+E VF ++ER SW+S+I G AM+ M G++ + +TF+
Sbjct: 326 KCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVA 385
Query: 327 VLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP 386
VL AC+H G V +GR+ F M + + P EH CL+DLL RAG L+EA E+I M
Sbjct: 386 VLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGE 445
Query: 387 PNGV---VWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVS 443
+ V+ +LL R + N+K+AE L +++ + + ++++VYA A +WE+V+
Sbjct: 446 SDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVT 505
Query: 444 RIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDE--THPQAKGIFEM 488
+RR MK G++K PGCSSI IDGV HEF+ GD+ +HP+ I M
Sbjct: 506 NVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSM 552
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 177/391 (45%), Gaps = 66/391 (16%)
Query: 44 HVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSD 103
++ L P+++ +N LK A+ + ++LF LR + PD+FT +LK+
Sbjct: 2 NMSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRK 61
Query: 104 IVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGH 163
++ G +H Y K G + + + N L+ +YAS G+ +FD+MPQ+DV +WN
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWN----- 116
Query: 164 LISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVT 222
+IS G E+A+ VF M +E + + +E T
Sbjct: 117 --------------------------GLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+V+ L AC+ L +LE G+ I+RF F +V + NAL+DM+ KCGCL++ VFD MR
Sbjct: 151 IVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMR 209
Query: 283 ERTVVSWSSMIVGF-------------------------AMHXXXXXXXXXXXX------ 311
++ V W+SM+ G+ AM
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRC 269
Query: 312 MIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAG 371
M +G++P++ + +L C+ G +++G+ + + V V LVD+ ++ G
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-LVDMYAKCG 328
Query: 372 RLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
+E A EV + + W +L+ G ++
Sbjct: 329 CIETALEVFYEIK-ERDTASWTSLIYGLAMN 358
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 271/545 (49%), Gaps = 37/545 (6%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLF-LRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+ + S + F G + LF + +LS H T + +L+A I G+ +H
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETH-TFAVMLRASAGLGSIYVGKQLH 247
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
KLG N + L+ +Y+ CG D+
Sbjct: 248 VCALKLGVVDNTFVSCGLIDMYSKCG-------------------------------DIE 276
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
AR F+ MP + +W +VI+G A G SEEAL + +M G ++ T+ ++
Sbjct: 277 DARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIST 336
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+L LE K H NGF + AL+D Y K G ++ VFD + + ++SW++
Sbjct: 337 KLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNA 396
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
++ G+A H MI + + PNHVTF+ VL AC++ GL ++G E F M +
Sbjct: 397 LMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVH 456
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
GI P HY C+++LL R G L+EA I + +W ALL CR+ +N++L
Sbjct: 457 GIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVV 516
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
L + P G YVVM N+Y GK E + + +++S+G+ P C+ + + H
Sbjct: 517 AEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHS 576
Query: 472 FVAGDE----THPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEK 527
F++GD + I++ ++L+ ++ GY + +L D++++++E HSEK
Sbjct: 577 FLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEK 636
Query: 528 LALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACT 587
LA+ YGL+NT P++I +N R+C++CH ++ +S + RE+VVRD +RFH FK G C+
Sbjct: 637 LAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCS 696
Query: 588 CKDYW 592
C YW
Sbjct: 697 CGGYW 701
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 47/420 (11%)
Query: 90 TCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM 149
T L++AC I + ++ ++ GF+ + N +L ++ CG ++ D
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCG------MIID-- 176
Query: 150 PQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFS 209
AR LFD +P RN+ S+ S+ISG G EA +F
Sbjct: 177 -----------------------ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 210 EMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCG 269
M E S T +L A A LG + GK +H A G + N +V LIDMY KCG
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 270 CLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLH 329
+E+ F+ M E+T V+W+++I G+A+H M SG+ + T ++
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIR 333
Query: 330 ACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNG 389
+ + ++ ++ + R+ G + LVD S+ GR++ AR V + N
Sbjct: 334 ISTKLAKLELTKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNI 391
Query: 390 VVWGALLGGCRLH----KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRI 445
+ W AL+GG H +KL E+ + + + P + + V+S A +G E+ I
Sbjct: 392 ISWNALMGGYANHGRGTDAVKLFEKMI--AANVAPNHVTFLAVLSAC-AYSGLSEQGWEI 448
Query: 446 RRSM------KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK 499
SM K R + + DG++ E +A P K MW LL +M+
Sbjct: 449 FLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAP-LKTTVNMWAALLNACRMQ 507
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 6/224 (2%)
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV-ACAQLGDLEFGKSIHRFAEG 248
S I L C EA +F +E S V+ LV AC +L + K ++ F
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 249 NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX 308
NGF Y+ N ++ M+VKCG + + R+FD + ER + S+ S+I GF
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLS 368
M TF +L A + +G + G++ + G+V L+D+ S
Sbjct: 212 FKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK-LGVVDNTFVSCGLIDMYS 270
Query: 369 RAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ G +E+AR M V W ++ G LH +EEA+
Sbjct: 271 KCGDIEDARCAFECMP-EKTTVAWNNVIAGYALH---GYSEEAL 310
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 238/462 (51%), Gaps = 8/462 (1%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P V W S L ++ G D + F +R + C + +
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H YV K GF+ L +N L+H+Y G+ A +F ++ + + +WN +I + AG +
Sbjct: 317 HGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKL 376
Query: 171 GAARDLFDSMP--------RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
A LF + + NV +WTSVI G G +++L F +M+ N VT
Sbjct: 377 DEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT 436
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+ +L CA+L L G+ IH N+ V NAL++MY KCG L EG VF+ +R
Sbjct: 437 ICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIR 496
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
++ ++SW+S+I G+ MH MI SG P+ + + VL ACSH GLV+KGRE
Sbjct: 497 DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGRE 556
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
F M + +G+ P EHY C+VDLL R G L+EA E++ NM + P V GALL CR+H
Sbjct: 557 IFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMH 616
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSS 462
KN+ +AE LS L+P G Y+++SN+Y+ G+WEE + +R K + +KK G S
Sbjct: 617 KNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSW 676
Query: 463 ITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD 504
I + ++F +G + + I+ + E L+ M KG D
Sbjct: 677 IEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHD 718
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 169/395 (42%), Gaps = 15/395 (3%)
Query: 33 ALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCS 92
LL+ V L + + WNS LK G + + L+ +RQ + D +
Sbjct: 103 GLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILP 162
Query: 93 FLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ 152
+L+AC R H V ++G + NL + N LL LY G A +F +MP +
Sbjct: 163 LILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVR 222
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVF 208
+ +WN+MI D +A +F+ M R + +WTSV+S ++CG E+ L+ F
Sbjct: 223 NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYF 282
Query: 209 SEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC 268
M G+ + + CA+L L + +H + GF + NALI +Y K
Sbjct: 283 HLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQ 342
Query: 269 GCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR----SGMKPNHVTF 324
G +++ +F +R + + SW+S+I F + +K N VT+
Sbjct: 343 GKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTW 402
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV---IA 381
V+ C+ G D E+F M+ + V C++ + + L RE+ +
Sbjct: 403 TSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT-ICCILSICAELPALNLGREIHGHVI 461
Query: 382 NMSVPPNGVVWGALL---GGCRLHKNIKLAEEAMR 413
S+ N +V AL+ C L L EA+R
Sbjct: 462 RTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIR 496
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 248/463 (53%), Gaps = 33/463 (7%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D A +V W + + F G+ + + F+ +++ + + T +LKA D+
Sbjct: 162 DGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVR 221
Query: 106 TGRIIHA-YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
GR +H Y++ + ++ + + L+ +Y C +D
Sbjct: 222 FGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS-------CYDD---------------- 258
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
A+ +FD MP RNV +WT++I+G + ++ + VF EM + PNE T+
Sbjct: 259 --------AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS 310
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER 284
+VL ACA +G L G+ +H + N N LID+YVKCGCLEE VF+ + E+
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
V +W++MI GFA H M+ S + PN VTF+ VL AC+H GLV++GR F
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKN 404
M+ + + P +HY C+VDL R G LEEA+ +I M + P VVWGAL G C LHK+
Sbjct: 431 LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKD 490
Query: 405 IKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSIT 464
+L + A + +L P + G Y +++N+Y+E+ W+EV+R+R+ MK + V K+PG S I
Sbjct: 491 YELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
Query: 465 IDGVVHEFVAGDETHP-QAKGIFEMWEKLLVKMKMKGYIPDTS 506
+ G + EF+A D+ P ++ +++ + + V+M++ + D +
Sbjct: 551 VKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELEDVT 593
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 188/409 (45%), Gaps = 49/409 (11%)
Query: 47 LAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVT 106
+ H + N L F A R +R+ ++P T LLKA D
Sbjct: 74 IGHFSGGITLNRRLSFLAYR-----------HMRRNGVIPSRHTFPPLLKAVFKLRDSNP 122
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
+ HA++ K G S+ ++N L+ Y+S G +FD
Sbjct: 123 FQF-HAHIVKFGLDSDPFVRNSLISGYSSSG-------LFD------------------- 155
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
A LFD ++V +WT++I G + G + EA+ F EM++ G NE+TVV+V
Sbjct: 156 -----FASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLR-NVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
L A ++ D+ FG+S+H G ++ +V++ ++L+DMY KC C ++ +VFD M R
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
VV+W+++I G+ M++S + PN T VL AC+HVG + +GR
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
M ++ I L+DL + G LEEA V + N W A++ G H
Sbjct: 331 YMIKN-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAMINGFAAHGYA 388
Query: 406 KLAEEAMRHL--SELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
+ A + + S + P N+ ++ + + A G EE R+ SMK R
Sbjct: 389 RDAFDLFYTMLSSHVSP-NEVTFMAVLSACAHGGLVEEGRRLFLSMKGR 436
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 127/325 (39%), Gaps = 49/325 (15%)
Query: 77 LRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASC 136
+ L+ L LP HF L I ++T I + + +L L +L +
Sbjct: 2 IELKTLLDLPLHF-----LHLKQIHCLLLTSPIFYT-------RRDLFLSRLLRRCCTAA 49
Query: 137 GETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLA 196
+ +AR + ++ + W+ +IGH +G + R L
Sbjct: 50 TQFRYARRLLCQLQTLSIQLWDSLIGHF--SGGITLNRRL-------------------- 87
Query: 197 KCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD---LEFGKSIHRFAEGNGFLR 253
+ + M R G P+ T +L A +L D +F I +F G
Sbjct: 88 -------SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKF----GLDS 136
Query: 254 NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 313
+ +V N+LI Y G + R+FDG ++ VV+W++MI GF + M
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 314 RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 373
++G+ N +T + VL A V V GR + + V LVD+ +
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCY 256
Query: 374 EEAREVIANMSVPPNGVVWGALLGG 398
++A++V M N V W AL+ G
Sbjct: 257 DDAQKVFDEMP-SRNVVTWTALIAG 280
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 263/529 (49%), Gaps = 73/529 (13%)
Query: 42 LSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLS-ILPDHFTCSFLLKACTI 100
L D P IV W+S + F + G+P + F R+ S + PD T L+ ACT
Sbjct: 116 LRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTK 175
Query: 101 SSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASC------------------------ 136
S+ GR +H +V + GF ++L L N LL+ YA
Sbjct: 176 LSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV 235
Query: 137 -------GETSHARLMFDKM----PQQDVATWNIMIGHLISAGDVGAARD---------- 175
G + A L+F+ M + +VAT ++ +A D+ R
Sbjct: 236 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 295
Query: 176 -------------------------LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSE 210
+F +PR++V SW ++ISG GM+ ++ FS
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 211 MEREG-SRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCG 269
M E +RP+ + +V VL +C++LG LE K H + GF N ++ +L+++Y +CG
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCG 415
Query: 270 CLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG-MKPNHVTFIGVL 328
L +VF+G+ + V W+S+I G+ +H M++S +KPN VTF+ +L
Sbjct: 416 SLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSIL 475
Query: 329 HACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 388
ACSH GL+ +G F +M DY + P +EHY LVDLL R G L+ A E+ M P
Sbjct: 476 SACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPT 535
Query: 389 GVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRS 448
+ G LLG CR+H+N ++AE + L EL+ + GYY++MSNVY G+WE V ++R S
Sbjct: 536 PQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNS 595
Query: 449 MKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMK 497
+K RG+KK S I I VH FVA DE HP+ + ++ + ++L + MK
Sbjct: 596 VKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 162/354 (45%), Gaps = 37/354 (10%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++ WN+ LK + + + F + + PD+FT LKAC ++ G +IH
Sbjct: 24 SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIH 83
Query: 112 AYVQK-LGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
+V+K + S+L + + L+++Y CG A MFD++ + D+
Sbjct: 84 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV--------------- 128
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVA 229
+W+S++SG K G +A+ F M P+ VT++ ++ A
Sbjct: 129 ----------------TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSA 172
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
C +L + G+ +H F GF ++ + N+L++ Y K +E +F + E+ V+SW
Sbjct: 173 CTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISW 232
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
S++I + + M+ G +PN T + VL AC+ +++GR+ + R
Sbjct: 233 STVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR 292
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGGCRLH 402
G+ V+ LVD+ + EEA V + +P VV W AL+ G L+
Sbjct: 293 K-GLETEVKVSTALVDMYMKCFSPEEAYAVFSR--IPRKDVVSWVALISGFTLN 343
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
AR +F M +R++ W +++ L++ EE L FS M R+ +P+ T+ L AC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 233 LGDLEFGKSIHRFAEGNGFL-RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
L ++ +G+ IH F + + L ++YV ++LI MY+KCG + E R+FD + + +V+WSS
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 292 MIVGFAMHXXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGLVDKGR 341
M+ GF + M+ S + P+ VT I ++ AC+ + GR
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/543 (30%), Positives = 266/543 (48%), Gaps = 33/543 (6%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+ +N+ + F G + LF + Q + F+ + + AC + S+ IH +
Sbjct: 383 ITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGF 442
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
K G N +Q LL + C + A MFD+ P
Sbjct: 443 CIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSN--------------------- 481
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR-PNEVTVVAVLVACAQ 232
DS ++ TS+I G A+ G+ ++A+ +F E +EV++ +L C
Sbjct: 482 ---LDSS-----KATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGT 533
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
LG E G IH +A G+ ++ + N+LI MY KC ++ ++F+ MRE V+SW+S+
Sbjct: 534 LGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSL 593
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHV--GLVDKGREFFTIMRRD 350
I + + M +KP+ +T V+ A + + R+ F M+
Sbjct: 594 ISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTI 653
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
Y I P EHY V +L G LEEA + I +M V P V ALL CR+H N +A+
Sbjct: 654 YDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKR 713
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
+ + P Y++ SN+Y+ +G W IR M+ RG +K P S I + +H
Sbjct: 714 VAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIH 773
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLAL 530
F A D +HPQ K I+ E L+++ GY P+T VL ++++ K+ FL+ HS KLA+
Sbjct: 774 SFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAV 833
Query: 531 VYGLINTKP-GMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCK 589
YG++++ G P+R+MKN+ +C DCH K +S + REIV+RD + FH F NG C+C+
Sbjct: 834 TYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCR 893
Query: 590 DYW 592
D W
Sbjct: 894 DLW 896
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 1/228 (0%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILP-DHFTCSFLLKACTISSDIVTGRIIH 111
+ WN+ + + G LF + ++ D FT S LL +CT SS ++ GR +H
Sbjct: 249 VASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELH 308
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
++G L + N L+ Y+ + +++ M QD T+ MI +S G V
Sbjct: 309 GRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVD 368
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+A ++F ++ +N ++ ++++G + G +AL++F++M + G + ++ + + AC
Sbjct: 369 SAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACG 428
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFD 279
+ + + + IH F G N + AL+DM +C + + +FD
Sbjct: 429 LVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 153/341 (44%), Gaps = 13/341 (3%)
Query: 146 FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL 205
F K+ ++ N +I + G A +F S+ V S+T++ISG ++ + EAL
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 206 RVFSEMEREG-SRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
+VF M + G +PNE T VA+L AC ++ G IH +GFL +V+V N+L+ +
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 265 YVK---CGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-SGMKPN 320
Y K C ++ ++FD + +R V SW++++ M R G +
Sbjct: 226 YDKDSGSSC-DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVD 284
Query: 321 HVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 380
T +L +C+ ++ +GRE R G++ + L+ S+ +++ E +
Sbjct: 285 SFTLSTLLSSCTDSSVLLRGRELHGRAIR-IGLMQELSVNNALIGFYSKFWDMKKV-ESL 342
Query: 381 ANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWE 440
M + + V + ++ + + + + A+ + + N Y + + G
Sbjct: 343 YEMMMAQDAVTFTEMITA---YMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGL 399
Query: 441 EVSRIRRSMKSRGVKKTPGCSSITID--GVVHEFVAGDETH 479
+ ++ M RGV+ T + +D G+V E ++ H
Sbjct: 400 KALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIH 440
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/425 (38%), Positives = 241/425 (56%), Gaps = 16/425 (3%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDH---------FTCSFLLKACTIS--SDI 104
+N L+ ++ P L+ +L++L L DH FT FLLKA + +
Sbjct: 80 FNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSL 139
Query: 105 VTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
+ G +H KLGF+S++ +Q L+ +Y G A +FD+MP+++ TWN+MI L
Sbjct: 140 LLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGL 199
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER-EGSRPNEVTV 223
+ GD A + MP R V SWT++I G A+ +EA+ +FS M + +PNE+T+
Sbjct: 200 TNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITI 259
Query: 224 VAVLVACAQLGDLEFGKSIHRFAEGNGFLR-NVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+A+L A LGDL+ S+H + GF+ ++ V N+LID Y KCGC++ + F +
Sbjct: 260 LAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIP 319
Query: 283 E--RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKG 340
+ +VSW++MI FA+H M R G+KPN VT I VL+ACSH GL ++
Sbjct: 320 NGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEE 379
Query: 341 -REFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
EFF M +Y I P V+HYGCLVD+L R GRLEEA ++ + + VVW LLG C
Sbjct: 380 FLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGAC 439
Query: 400 RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPG 459
++ + +LAE R L EL+ + G YV+MSN++ G++ + R R+ M RGV K PG
Sbjct: 440 SVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPG 499
Query: 460 CSSIT 464
S +T
Sbjct: 500 HSQVT 504
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 241/445 (54%), Gaps = 36/445 (8%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WN+ + +++ D + +F ++R+ + T + +L A T+S DI GR IH
Sbjct: 228 VLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGL 287
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
K G S++++ N L+ +Y + W + A
Sbjct: 288 AVKTGSGSDIVVSNALIDMYGK-------------------SKW------------LEEA 316
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
+F++M R++ +W SV+ CG + L +F M G RP+ VT+ VL C +L
Sbjct: 317 NSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRL 376
Query: 234 GDLEFGKSIHRFAEGNGFLR----NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
L G+ IH + +G L N ++ N+L+DMYVKCG L + VFD MR + SW
Sbjct: 377 ASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASW 436
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+ MI G+ + M R+G+KP+ +TF+G+L ACSH G +++GR F M
Sbjct: 437 NIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMET 496
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
Y I+P +HY C++D+L RA +LEEA E+ + + N VVW ++L CRLH N LA
Sbjct: 497 VYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
A + L EL+P + G YV+MSNVY EAGK+EEV +R +M+ + VKKTPGCS I + V
Sbjct: 557 VAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGV 616
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLV 494
H F G++THP+ K I + W L++
Sbjct: 617 HTFFTGNQTHPEFKSIHD-WLSLVI 640
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 162/354 (45%), Gaps = 45/354 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ +N+ + F G+P D + + +R ILPD +T LLK + + ++ + +H
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHG 184
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
KLGF S+ + + L+ Y+ A+ +FD++P +D +
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVL--------------- 229
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
W ++++G ++ E+AL VFS+M EG + T+ +VL A
Sbjct: 230 ---------------WNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTV 274
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
GD++ G+SIH A G ++ V NALIDMY K LEE +F+ M ER + +W+S+
Sbjct: 275 SGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSV 334
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
+ M+ SG++P+ VT VL C + + +GRE Y
Sbjct: 335 LCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREI-----HGYM 389
Query: 353 IVPGVEH--------YGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
IV G+ + + L+D+ + G L +AR V +M V + W ++ G
Sbjct: 390 IVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRV-KDSASWNIMING 442
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 219 NEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNV-YVCNALIDMYVKCGCLEEGCRV 277
N T +A L CAQ D G+ IH F GFL + +L++MY KCG + V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 278 FDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
F G ER V ++++I GF ++ M +G+ P+ TF +L + L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 338 D----KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWG 393
D G F D + G LV S+ +E+A++V + + V+W
Sbjct: 178 DVKKVHGLAFKLGFDSDCYVGSG------LVTSYSKFMSVEDAQKVFDELPDRDDSVLWN 231
Query: 394 ALLGGCRLHKNIKLAEEAMRHLSEL 418
AL+ G + I E+A+ S++
Sbjct: 232 ALVNG---YSQIFRFEDALLVFSKM 253
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 182/586 (31%), Positives = 282/586 (48%), Gaps = 54/586 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ W + + G + +F ++ ++P+ T + AC+ I G +H+
Sbjct: 317 VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
K+GF ++++ N L+ +Y+ CG+ AR +FD + +DV TWN MI AG G
Sbjct: 377 IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGK 436
Query: 173 ARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREG------------- 215
A +LF M N+R +W ++ISG K G EA+ +F ME++G
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 216 ---------------------SR--PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFL 252
SR PN VT++++L ACA L + + IH G
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH----GCVLR 552
Query: 253 RNV----YVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX 308
RN+ V NAL D Y K G +E +F GM + +++W+S+I G+ +H
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALAL 612
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLS 368
M G+ PN T ++ A +G VD+G++ F + DY I+P +EH +V L
Sbjct: 613 FNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYG 672
Query: 369 RAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVV 428
RA RLEEA + I M++ +W + L GCR+H +I +A A +L L+P N +
Sbjct: 673 RANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESI 732
Query: 429 MSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 488
+S +YA K + + +KK G S I + ++H F GD Q+K ++
Sbjct: 733 VSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGD----QSKLCTDV 788
Query: 489 WEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPG--MPIRIM 546
L+ KM D L +E+E +E HSEK A+ +GLI++ IRI+
Sbjct: 789 LYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRIL 848
Query: 547 KNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
KNLR+C DCH K VS+ +I++ D H FKNG C+CKDYW
Sbjct: 849 KNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 229/523 (43%), Gaps = 75/523 (14%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ W++ + ++ + LF + + +LPD F +L+ C D+ G++IH+
Sbjct: 146 LFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDV------------------ 154
V KLG S L + N +L +YA CGE A F +M ++DV
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE 265
Query: 155 -----------------ATWNIMIGHLISAGDVGAARDLFDSMPR----RNVRSWTSVIS 193
TWNI+IG G AA DL M +V +WT++IS
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 194 GLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLR 253
GL GM +AL +F +M G PN VT+++ + AC+ L + G +H A GF+
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID 385
Query: 254 NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 313
+V V N+L+DMY KCG LE+ +VFD ++ + V +W+SMI G+ M
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 314 RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 373
+ ++PN +T+ ++ G + + F M +D + + ++ + G+
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 374 EEAREVIANMSVP---PNGVVWGALLGGCRLHKNIKLAEEA-----MRHLSELDPLNDGY 425
+EA E+ M PN V +LL C K+ E R+L + + +
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNA- 564
Query: 426 YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 485
+++ YA++G E I M+++ + IT + ++ +V P
Sbjct: 565 ---LTDTYAKSGDIEYSRTIFLGMETKDI--------ITWNSLIGGYVLHGSYGPAL--- 610
Query: 486 FEMWEKLLVKMKMKGYIPD----TSVV----LLDMEDEQKEIF 520
L +MK +G P+ +S++ L+ DE K++F
Sbjct: 611 -----ALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF 648
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 164/368 (44%), Gaps = 43/368 (11%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
LL++C S I GRI+HA L + ++ ++ LL +YA CG
Sbjct: 87 LLESCIDSGSIHLGRILHARF-GLFTEPDVFVETKLLSMYAKCG---------------- 129
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
+ AR +FDSM RN+ +W+++I ++ E ++F M +
Sbjct: 130 ---------------CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
+G P++ +L CA GD+E GK IH G + V N+++ +Y KCG L+
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 274 GCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSH 333
+ F MRER V++W+S+++ + + M + G+ P VT+ ++ +
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 334 VGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGV 390
+G D + M +GI V + ++ L G +A ++ M V PN V
Sbjct: 295 LGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 391 VWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSN----VYAEAGKWEEVSRIR 446
+ + C K I E ++ ++D V++ N +Y++ GK E+ ++
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD---VLVGNSLVDMYSKCGKLEDARKVF 410
Query: 447 RSMKSRGV 454
S+K++ V
Sbjct: 411 DSVKNKDV 418
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 270/554 (48%), Gaps = 48/554 (8%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI--- 109
+V WNS + F I +F+R+ + D T + + SSD+V +
Sbjct: 226 LVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKC 285
Query: 110 ---IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
+H+ K G + + L+ +Y+ E
Sbjct: 286 CLQLHSLTVKSGLVTQTEVATALIKVYSEMLE---------------------------- 317
Query: 167 AGDVGAARDLFDSMPR-RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
D LF M R++ +W +I+ A E A+ +F ++ +E P+ T +
Sbjct: 318 --DYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSS 374
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
VL ACA L SIH GFL + + N+LI Y KCG L+ RVFD M R
Sbjct: 375 VLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRD 434
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
VVSW+SM+ +++H M + P+ TFI +L ACSH G V++G F
Sbjct: 435 VVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFR 491
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
M +P + HY C++D+LSRA R EA EVI M + P+ VVW ALLG CR H N
Sbjct: 492 SMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNT 551
Query: 406 KLAEEAMRHLSEL-DPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSIT 464
+L + A L EL +P N Y+ MSN+Y G + E + + M++ V+K P S
Sbjct: 552 RLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTE 611
Query: 465 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT-SVVLLDMEDEQKEIFLYR 523
I VHEF +G P + ++ ++L+ +K GY+P+ S ++EQ+E L
Sbjct: 612 IGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLH 671
Query: 524 HSEKLALVYGLINTKPGMP-----IRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRF 578
HSEKLAL + ++ + I+IMKN R+C DCH +KL S++ +EI++RD NRF
Sbjct: 672 HSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRF 731
Query: 579 HCFKNGACTCKDYW 592
H FK+ +C+C DYW
Sbjct: 732 HHFKDSSCSCNDYW 745
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 41/208 (19%)
Query: 94 LLKACTISSDIVTGRIIHAYV--QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQ 151
L +AC +++ G +H ++ + N+IL N L+++YA CG
Sbjct: 65 LFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCG-------------- 110
Query: 152 QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM 211
NI+ AR +FD+MP RNV SWT++I+G + G +E +FS M
Sbjct: 111 ------NILY-----------ARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 212 EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC--- 268
PNE T+ +VL +C E GK +H A G ++YV NA+I MY +C
Sbjct: 154 LSH-CFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 269 GCLEEGCRVFDGMRERTVVSWSSMIVGF 296
E VF+ ++ + +V+W+SMI F
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 45 VDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDI 104
++++H IV WN + FA P I LF +LRQ + PD +T S +LKAC + +
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKAC---AGL 382
Query: 105 VTGR---IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMI 161
VT R IHA V K GF ++ +L N L+H YA CG +FD M +DV +WN M+
Sbjct: 383 VTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML 442
Query: 162 GHLISAGDVGAARDLFDSMP-RRNVRSWTSVISGLAKCGMSEEALRVFSEM 211
G V + +F M + ++ +++S + G EE LR+F M
Sbjct: 443 KAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSM 493
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 168/409 (41%), Gaps = 54/409 (13%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W + + + + G + LF + P+ FT S +L +C G+ +H
Sbjct: 127 VVSWTALITGYVQAGNEQEGFCLFSSMLS-HCFPNEFTLSSVLTSCRYE----PGKQVHG 181
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
KLG ++ + N ++ +Y C + + A W +
Sbjct: 182 LALKLGLHCSIYVANAVISMYGRCHDGAAA-----------YEAWTV------------- 217
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
F+++ +N+ +W S+I+ C + ++A+ VF M +G + T++ + + +
Sbjct: 218 ----FEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYK 273
Query: 233 LGDL---EFGK---SIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE--- 283
DL E K +H +G + V ALI +Y + LE+ + E
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSH 331
Query: 284 -RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
R +V+W+ +I FA++ + + + P+ TF VL AC+ GLV R
Sbjct: 332 CRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKACA--GLV-TARH 387
Query: 343 FFTIMRR--DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCR 400
+I + G + L+ ++ G L+ V +M + V W ++L
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMD-SRDVVSWNSMLKAYS 446
Query: 401 LHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSM 449
LH + + + +++P + ++ + + + AG+ EE RI RSM
Sbjct: 447 LHGQVDSILPVFQKM-DINP-DSATFIALLSACSHAGRVEEGLRIFRSM 493
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Query: 180 MPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFG 239
+P R + + L + G A+ +F E ++ A+ ACA+ +L G
Sbjct: 21 LPSALKREFVEGLRTLVRSGDIRRAVSLFYSAPVE--LQSQQAYAALFQACAEQRNLLDG 78
Query: 240 KSIHR--FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFA 297
++H + + +NV + N LI+MY KCG + +VFD M ER VVSW+++I G+
Sbjct: 79 INLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYV 138
Query: 298 MHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSH 333
M+ S PN T VL +C +
Sbjct: 139 QAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRY 173
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 229/420 (54%), Gaps = 40/420 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W S + F D I F ++ + + LL AC DIVTG+ H
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 113 YVQKLGFQS--------NLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
++Q LGF N+IL L+ +YA CG
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCG--------------------------- 265
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
D+ AR LFD MP R + SW S+I+G ++ G +EEAL +F +M G P++VT +
Sbjct: 266 ----DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFL 321
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER 284
+V+ A G + G+SIH + GF+++ + AL++MY K G E + F+ + ++
Sbjct: 322 SVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGREF 343
++W+ +I+G A H M G P+ +T++GVL+ACSH+GLV++G+ +
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 344 FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK 403
F MR +G+ P VEHYGC+VD+LSRAGR EEA ++ M V PN +WGALL GC +H+
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Query: 404 NIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
N++L + ++E + L G YV++SN+YA+AG+W +V IR SMKS+ V K G SS+
Sbjct: 502 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 201/447 (44%), Gaps = 83/447 (18%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P++ WNS ++ ++ P + + + + PD+FT ++LKAC+ DI G +
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H +V K GF+ N+ + LLH+Y CGE ++ +F+ +PQ WN++
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQ-----WNVV---------- 174
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
+W S+ISG +A+ F EM+ G + NE +V +LVAC
Sbjct: 175 ----------------AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC 218
Query: 231 AQLGDLEFGKSIHRFAEGNGFLR--------NVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+ D+ GK H F +G GF NV + +LIDMY KCG L +FDGM
Sbjct: 219 GRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP 278
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
ERT+VSW+S+I G++ + M+ G+ P+ VTF+ V+ A G G+
Sbjct: 279 ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS 338
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM------------------- 383
+ + G V LV++ ++ G E A++ ++
Sbjct: 339 IHAYVSKT-GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHG 397
Query: 384 ----------------SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLND---- 423
+ P+G+ + +L C +I L EE R+ +E+ L+
Sbjct: 398 HGNEALSIFQRMQEKGNATPDGITYLGVLYAC---SHIGLVEEGQRYFAEMRDLHGLEPT 454
Query: 424 -GYYVVMSNVYAEAGKWEEVSRIRRSM 449
+Y M ++ + AG++EE R+ ++M
Sbjct: 455 VEHYGCMVDILSRAGRFEEAERLVKTM 481
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
++ AR +F+S+ +V W S+I G + ++AL + EM R+G P+ T VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
AC+ L D++FG +H F GF N+YV L+ MY+ CG + G RVF+ + + VV+
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
W S+I GF + M +G+K N + +L AC + G+ F +
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL- 234
Query: 349 RDYGIVPGVEH--------YGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGGC 399
+ G P + L+D+ ++ G L AR + M P +V W +++ G
Sbjct: 235 QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGM--PERTLVSWNSIITGY 292
Query: 400 RLHKNIKLAEEAM 412
+ + AEEA+
Sbjct: 293 SQNGD---AEEAL 302
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 228/432 (52%), Gaps = 1/432 (0%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN+ + +A+ G + + + R+ I + F+ + LL AC S + R H
Sbjct: 144 VVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHG 203
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V GF SN++L ++ YA CG+ A+ FD+M +D+ W +I GD+ A
Sbjct: 204 QVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEA 263
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A LF MP +N SWT++I+G + G AL +F +M G +P + T + L A A
Sbjct: 264 AEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASAS 323
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER-TVVSWSS 291
+ L GK IH + N V ++LIDMY K G LE RVF ++ V W++
Sbjct: 324 IASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNT 383
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI A H MI+ ++PN T + +L+ACSH GLV++G +F M +
Sbjct: 384 MISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQH 443
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
GIVP EHY CL+DLL RAG +E I M P+ +W A+LG CR+H N +L ++A
Sbjct: 444 GIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKA 503
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
L +LDP + Y+++S++YA+ GKWE V ++R MK R V K S I I+ V
Sbjct: 504 ADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEA 563
Query: 472 FVAGDETHPQAK 483
F D +H A+
Sbjct: 564 FTVSDGSHAHAR 575
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 187/430 (43%), Gaps = 42/430 (9%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSI-LPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
S L A + +S L Q I LP S LL+ C + + G+ IH +++
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLAS-LLQQCGDTKSLKQGKWIHRHLK 73
Query: 116 KLGFQS-NLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAAR 174
GF+ N +L N L+ +Y CG+ A +FD+M +++ +WN M+ + +G + AR
Sbjct: 74 ITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRAR 133
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
+FDSMP R+V SW +++ G A+ G EAL + E R G + NE + +L AC +
Sbjct: 134 VVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR 193
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR------------ 282
L+ + H GFL NV + ++ID Y KCG +E R FD M
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 283 -------------------ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVT 323
E+ VSW+++I G+ MI G+KP T
Sbjct: 254 GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 324 FIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 383
F L A + + + G+E M R + P L+D+ S++G LE + V
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRIC 372
Query: 384 SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL----NDGYYVVMSNVYAEAGKW 439
+ V W ++ H L +A+R L ++ N VV+ N + +G
Sbjct: 373 DDKHDCVFWNTMISALAQH---GLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 440 EEVSRIRRSM 449
EE R SM
Sbjct: 430 EEGLRWFESM 439
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 245/448 (54%), Gaps = 11/448 (2%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
IV WNS +K +RG + ++LF R+ + ++ L K + R+
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDE---ARRLFDC 227
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
++ N+I N ++ YA A +F MP++D A+WN MI I ++
Sbjct: 228 MPER-----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNK 282
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVACA 231
A LFD MP +NV SWT++I+G + +EEAL VFS+M R+GS +PN T V++L AC+
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG--MRERTVVSW 289
L L G+ IH+ + +N V +AL++MY K G L ++FD + +R ++SW
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+SMI +A H M + G KP+ VT++ +L ACSH GLV+KG EFF + R
Sbjct: 403 NSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
D + EHY CLVDL RAGRL++ I + +GA+L C +H + +A+
Sbjct: 463 DESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAK 522
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
E ++ + E + G YV+MSN+YA GK EE + +R MK +G+KK PGCS + +
Sbjct: 523 EVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQN 582
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMK 497
H FV GD++HPQ + + + L KM+
Sbjct: 583 HLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 190/397 (47%), Gaps = 32/397 (8%)
Query: 5 CSTLPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFA 64
S+ P++P+P L + + +AR L D +V W + +
Sbjct: 39 SSSSRPRVPQPEWLIGELCKVGKIAEARKLF----------DGLPERDVVTWTHVITGYI 88
Query: 65 ERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNL 123
+ G + LF R+ + +++ S L++ +S I Q++ + N+
Sbjct: 89 KLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLS-------IAEMLFQEMP-ERNV 140
Query: 124 ILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRR 183
+ N ++ YA G A +FD+MP++++ +WN M+ L+ G + A +LF+ MPRR
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR 200
Query: 184 NVRSWTSVISGLAKCGMSEEALRVFSEM-EREGSRPNEVTVVAVLVACAQLGDLEFGKSI 242
+V SWT+++ GLAK G +EA R+F M ER N ++ A++ AQ ++ +
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPER-----NIISWNAMITGYAQNNRIDEADQL 255
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXX 302
+ R+ N +I +++ + + C +FD M E+ V+SW++MI G+ +
Sbjct: 256 FQVMPE----RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKEN 311
Query: 303 XXXXXXXXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
M+R G +KPN T++ +L ACS + + +G++ ++ + +
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT-S 370
Query: 362 CLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLG 397
L+++ S++G L AR++ N V ++ W +++
Sbjct: 371 ALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 129/296 (43%), Gaps = 63/296 (21%)
Query: 125 LQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRN 184
L N++ +Y+S ++PQ + W +IG L G + AR LFD +P R+
Sbjct: 30 LFNLVRSIYSSSSRP--------RVPQPE---W--LIGELCKVGKIAEARKLFDGLPERD 76
Query: 185 VRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHR 244
V +WT VI+G K G EA +F +R SR N VT A++ + L + +
Sbjct: 77 VVTWTHVITGYIKLGDMREARELF---DRVDSRKNVVTWTAMVSGYLRSKQLSIAEML-- 131
Query: 245 FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXX 304
F E RNV N +ID Y + G +++ +FD M ER +VSW+SM+
Sbjct: 132 FQEMPE--RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMV----------- 178
Query: 305 XXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM-RRDYGIVPGVEHYGCL 363
A G +D+ F M RRD V + +
Sbjct: 179 ------------------------KALVQRGRIDEAMNLFERMPRRD------VVSWTAM 208
Query: 364 VDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELD 419
VD L++ G+++EAR + M N + W A++ G + I A++ + + E D
Sbjct: 209 VDGLAKNGKVDEARRLFDCMP-ERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 237/448 (52%), Gaps = 5/448 (1%)
Query: 55 PWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTI-SSDIVTGRIIHAY 113
WN + A G +SLF + + PD +T S L+ AC+ SS++V GR++HA
Sbjct: 171 AWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAV 230
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ K G+ S + +N +L Y G A + + +WN +I + G+ A
Sbjct: 231 MLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKA 290
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
++F P +N+ +WT++I+G + G E+ALR F EM + G + AVL AC+ L
Sbjct: 291 LEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGL 350
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
L GK IH GF YV NAL+++Y KCG ++E R F + + +VSW++M+
Sbjct: 351 ALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTML 410
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
F +H MI SG+KP++VTFIG+L CSH GLV++G F M +DY I
Sbjct: 411 FAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRI 470
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSV----PPNGVVWGALLGGCRLHKNIKLAE 409
V+H C++D+ R G L EA+++ S N W LLG C H + +L
Sbjct: 471 PLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGR 530
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
E + L +P + +V++SN+Y G+W+E +RR M RG+KKTPGCS I + V
Sbjct: 531 EVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQV 590
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMK 497
FV GD +HP+ + + E L +M+
Sbjct: 591 STFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 182/398 (45%), Gaps = 47/398 (11%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WN+ L ++ G + I+LF +LR PD ++ + +L C ++ GR I +
Sbjct: 36 VAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSL 95
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM--PQQDVATWNIMIGHLISAGDVG 171
V + GF ++L + N L+ +Y C +T A +F M ++ TW ++ ++A
Sbjct: 96 VIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFE 155
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC- 230
AA D+F MP+R +W +ISG A CG E L +F EM +P+ T +++ AC
Sbjct: 156 AALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCR-------------- 276
A ++ +G+ +H NG+ V N+++ Y K G ++ R
Sbjct: 216 ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWN 275
Query: 277 -----------------VFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
VF E+ +V+W++MI G+ + M++SG+
Sbjct: 276 SIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDS 335
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG----CLVDLLSRAGRLEE 375
+H + VLHACS + L+ G+ + I G + Y LV+L ++ G ++E
Sbjct: 336 DHFAYGAVLHACSGLALLGHGKMIHGCL-----IHCGFQGYAYVGNALVNLYAKCGDIKE 390
Query: 376 AREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
A +++ + V W +L +H LA++A++
Sbjct: 391 ADRAFGDIA-NKDLVSWNTMLFAFGVH---GLADQALK 424
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 39/328 (11%)
Query: 161 IGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNE 220
I L +G + +AR +FD MP + +W ++++ ++ G+ +EA+ +F+++ ++P++
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 221 VTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCG----------- 269
+ A+L CA LG+++FG+ I +GF ++ V N+LIDMY KC
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 270 -C---------------------LEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXX 307
C E VF M +R +W+ MI G A
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 308 XXXXMIRSGMKPNHVTFIGVLHACS-HVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDL 366
M+ S KP+ TF +++ACS V GR +M ++ G VE ++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKNSVLSF 249
Query: 367 LSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYY 426
++ G ++A + ++ V V W +++ C I E+A+ N +
Sbjct: 250 YTKLGSRDDAMRELESIEVLTQ-VSWNSIIDACM---KIGETEKALEVFHLAPEKNIVTW 305
Query: 427 VVMSNVYAEAGKWEEVSRIRRSMKSRGV 454
M Y G E+ R M GV
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGV 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Query: 37 KTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLK 96
+T L LA IV W + + + G + F+ + + + DHF +L
Sbjct: 286 ETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLH 345
Query: 97 ACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVAT 156
AC+ + + G++IH + GFQ + N L++LYA CG+ A F + +D+ +
Sbjct: 346 ACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVS 405
Query: 157 WNIMIGHLISAGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEME 212
WN M+ G A L+D+M ++ ++ +++ + G+ EE +F M
Sbjct: 406 WNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMV 465
Query: 213 REGSRPNEVTVVAVLV 228
++ P EV V ++
Sbjct: 466 KDYRIPLEVDHVTCMI 481
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 159/513 (30%), Positives = 253/513 (49%), Gaps = 60/513 (11%)
Query: 2 LCLCSTLPPQIPKPTHLDHATSQNHHLKQARALLIKT------------------NAPLS 43
+ +CS+ P +P + + A S ++QA A ++KT N
Sbjct: 32 MSVCSSTP--VPILSFTERAKSLTE-IQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPK 88
Query: 44 HVDLAHV-------PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLK 96
V AH P NS ++ +A P +++F + + PD ++ +F+LK
Sbjct: 89 TVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLK 148
Query: 97 ACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVAT 156
AC GR IH K G +++ ++N L+++Y G AR + D+MP +D +
Sbjct: 149 ACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 157 WNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM----- 211
WN ++ + G V AR LFD M RNV SW +ISG A G+ +EA VF M
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 212 ---------------------------EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHR 244
+ +P+ T+V+VL ACA LG L G+ +H
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 245 FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXX 304
+ + +G ++ AL+DMY KCG +++ VF +R V +W+S+I ++H
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 305 XXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLV 364
M+ G KPN +TFIGVL AC+HVG++D+ R+ F +M Y + P +EHYGC+V
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMV 448
Query: 365 DLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDG 424
DLL R G++EEA E++ + ++ +LLG C+ ++ AE L EL+ +
Sbjct: 449 DLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSS 508
Query: 425 YYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT 457
Y MSN+YA G+WE+V RR+M++ V ++
Sbjct: 509 GYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 128/307 (41%), Gaps = 19/307 (6%)
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
V A + + + N + SVI A E AL VF EM P++ + VL A
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
CA E G+ IH +G + +V+V N L+++Y + G E +V D M R VSW
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSW 209
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR- 348
+S++ + M ++ + G A GLV + +E F M
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAA----GLVKEAKEVFDSMPV 265
Query: 349 RDY----GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKN 404
RD +V H GC ++ LE +++ + + P+G ++L C +
Sbjct: 266 RDVVSWNAMVTAYAHVGCYNEV------LEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 405 IKLAEEAMRHLSELDPLNDGYY-VVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
+ E ++ + +G+ + ++Y++ GK ++ + R+ R V +SI
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVST---WNSI 376
Query: 464 TIDGVVH 470
D VH
Sbjct: 377 ISDLSVH 383
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 273/540 (50%), Gaps = 44/540 (8%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V W + + + G D L + + + + P+ T S +L+AC+ + I
Sbjct: 390 PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
HAY+ + +++ N L+ YAS + +A WN++
Sbjct: 450 HAYLLRRHVDGEMVVGNSLVDAYASSRKVDYA--------------WNVI---------- 485
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
SM RR+ ++TS+++ + G E AL V + M +G R +++++ + A
Sbjct: 486 -------RSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
A LG LE GK +H ++ +GF V N+L+DMY KCG LE+ +VF+ + VVSW+
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWN 598
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
++ G A + M +P+ VTF+ +L ACS+ L D G E+F +M++
Sbjct: 599 GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKI 658
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
Y I P VEHY LV +L RAGRLEEA V+ M + PN +++ LL CR N+ L E+
Sbjct: 659 YNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGED 718
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
L P + Y++++++Y E+GK E + R M + + K G S++ + G VH
Sbjct: 719 MANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVH 778
Query: 471 EFVAGDETH-PQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLA 529
FV+ D T + GI+ E + ++K G + F HS K A
Sbjct: 779 SFVSEDVTRVDKTNGIYAEIESIKEEIKRFGS---------PYRGNENASF---HSAKQA 826
Query: 530 LVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCK 589
+VYG I P P+ ++KN +C+DCH + +++ + +++I VRD N+ H FKNG C+CK
Sbjct: 827 VVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 153/352 (43%), Gaps = 35/352 (9%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+ W + F + +SLF + P+ FT S ++++C DI G +H
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
V K GF+ N ++ + L LY+ CG+ A
Sbjct: 148 GSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC---------------------------- 179
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+LF S+ + SWT +IS L EAL+ +SEM + G PNE T V +L A +
Sbjct: 180 ---ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASS 236
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
LG LEFGK+IH G NV + +L+D Y + +E+ RV + E+ V W+S
Sbjct: 237 FLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTS 295
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
++ GF + M G++PN+ T+ +L CS V +D G++ + +
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK-V 354
Query: 352 GIVPGVEHYGCLVDLLSRAGRLE-EAREVIANMSVPPNGVVWGALLGGCRLH 402
G + LVD+ + E EA V M V PN V W L+ G H
Sbjct: 355 GFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDH 405
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 150/346 (43%), Gaps = 43/346 (12%)
Query: 90 TCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM 149
+C +L C +S + G IH V K G NL L N LL LY
Sbjct: 26 SCIRILSFCESNSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTD------------ 72
Query: 150 PQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFS 209
WN AR LFD M R V +WT +IS K AL +F
Sbjct: 73 -----GIWN--------------ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFE 113
Query: 210 EMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCG 269
EM G+ PNE T +V+ +CA L D+ +G +H GF N V ++L D+Y KCG
Sbjct: 114 EMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCG 173
Query: 270 CLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLH 329
+E C +F ++ +SW+ MI M+++G+ PN TF+ +L
Sbjct: 174 QFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG 233
Query: 330 ACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNG 389
A S +GL I+ R GI V LVD S+ ++E+A V+ N S +
Sbjct: 234 ASSFLGLEFGKTIHSNIIVR--GIPLNVVLKTSLVDFYSQFSKMEDAVRVL-NSSGEQDV 290
Query: 390 VVWGALLGGCRLHKNIKLAEEA-----MRHLSELDPLNDGYYVVMS 430
+W +++ G +N++ E MR L L P N Y ++S
Sbjct: 291 FLWTSVVSG--FVRNLRAKEAVGTFLEMRSLG-LQPNNFTYSAILS 333
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 147/337 (43%), Gaps = 53/337 (15%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
W L+F++E + + + P+ FT LL A + + G+ IH+ +
Sbjct: 206 WREALQFYSE-------------MVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNII 251
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
G N++L+ L+ Y+ + A + + +QDV W
Sbjct: 252 VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLW------------------ 293
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
TSV+SG + ++EA+ F EM G +PN T A+L C+ +
Sbjct: 294 -------------TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRS 340
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLE-EGCRVFDGMRERTVVSWSSMIV 294
L+FGK IH GF + V NAL+DMY+KC E E RVF M VVSW+++I+
Sbjct: 341 LDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLIL 400
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR---DY 351
G H M++ ++PN VT GVL ACS + V + E + R D
Sbjct: 401 GLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDG 460
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 388
+V G LVD + + +++ A VI +M N
Sbjct: 461 EMVVG----NSLVDAYASSRKVDYAWNVIRSMKRRDN 493
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 34/377 (9%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
W S + F + + FL +R L + P++FT S +L C+ + G+ IH+
Sbjct: 293 WTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTI 352
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K+GF+ + + N L+ +Y C SA +V A+R
Sbjct: 353 KVGFEDSTDVGNALVDMYMKC-----------------------------SASEVEASR- 382
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
+F +M NV SWT++I GL G ++ + EM + PN VT+ VL AC++L
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRH 442
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
+ IH + + V N+L+D Y ++ V M+ R ++++S++
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVP 355
F M G++ + ++ G + A +++G ++ G+ + G
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKS-GFSG 561
Query: 356 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRH- 414
LVD+ S+ G LE+A++V ++ P+ V W L+ G + I A A
Sbjct: 562 AASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVSGLASNGFISSALSAFEEM 620
Query: 415 -LSELDPLNDGYYVVMS 430
+ E +P + + +++S
Sbjct: 621 RMKETEPDSVTFLILLS 637
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 246/479 (51%), Gaps = 66/479 (13%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRI 109
P WN +K ++ + +T+S+ +R+ + + PD +T ++K C+ + + G
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASC-------------------------------GE 138
+H V ++GF ++++ + Y C GE
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE 191
Query: 139 TSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRN-------------- 184
A+ MFD MP++++ +WN ++ L+ +GD+ A+ LFD MP+R+
Sbjct: 192 LEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKG 251
Query: 185 -----------------VRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
VR+W+++I G A+ G EA +VFSEM + +P+E +V ++
Sbjct: 252 GDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLM 311
Query: 228 VACAQLGDLEFGKSIHRFAEG--NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
AC+Q+G E + + + N F + YV ALIDM KCG ++ ++F+ M +R
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFSSH-YVVPALIDMNAKCGHMDRAAKLFEEMPQRD 370
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
+VS+ SM+ G A+H M+ G+ P+ V F +L C LV++G +F
Sbjct: 371 LVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFE 430
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
+MR+ Y I+ +HY C+V+LLSR G+L+EA E+I +M + WG+LLGGC LH N
Sbjct: 431 LMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNT 490
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSIT 464
++AE RHL EL+P + G YV++SN+YA +W +V+ +R M G+ K G S I+
Sbjct: 491 EIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWIS 549
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 165/494 (33%), Positives = 256/494 (51%), Gaps = 23/494 (4%)
Query: 3 CLCSTLPPQIPK-PTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLK 61
L + P IP+ H+D +N H K + +D+ A++
Sbjct: 22 ALVTKSPNSIPELVKHIDSDLIRNAH---------KVFDEIPELDVISATAVIG------ 66
Query: 62 FFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQS 121
F + + F RL L I P+ FT ++ + T S D+ G+ +H Y K+G S
Sbjct: 67 RFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLAS 126
Query: 122 NLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMP 181
N+ + + +L+ Y + AR FD +V + +I + + A LF +MP
Sbjct: 127 NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 186
Query: 182 RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR-PNEVTVVAVLVACAQLGDLEFGK 240
R+V +W +VI G ++ G +EEA+ F +M REG PNE T + A + + GK
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGK 246
Query: 241 SIHRFA-EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE--RTVVSWSSMIVGFA 297
SIH A + G NV+V N+LI Y KCG +E+ F+ + E R +VSW+SMI G+A
Sbjct: 247 SIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYA 306
Query: 298 MHXXXXXXXXXXXXMIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI--V 354
+ M++ + ++PN+VT +GVL AC+H GL+ +G +F DY +
Sbjct: 307 HNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNL 366
Query: 355 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRH 414
+EHY C+VD+LSR+GR +EA E+I +M + P W ALLGGC++H N +LA+ A
Sbjct: 367 LELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASK 426
Query: 415 LSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVA 474
+ ELDP + YV++SN Y+ W+ VS IRR MK G+K+ GCS I + + FV
Sbjct: 427 ILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVN 486
Query: 475 GDETHPQAKGIFEM 488
D+ + ++ M
Sbjct: 487 ADKNNELKDEVYRM 500
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 232/447 (51%), Gaps = 34/447 (7%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P WN + A G + +S+F ++R +PD + LL A T + G I
Sbjct: 334 PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI 393
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H+Y+ K GF ++L + N LL +Y C + +F+
Sbjct: 394 HSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF--------------------- 432
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
R+ DS+ SW ++++ + E LR+F M P+ +T+ +L C
Sbjct: 433 ---RNNADSV------SWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
++ L+ G +H ++ G ++ N LIDMY KCG L + R+FD M R VVSWS
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
++IVG+A M +G++PNHVTF+GVL ACSHVGLV++G + + M+ +
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
+GI P EH C+VDLL+RAGRL EA I M + P+ VVW LL C+ N+ LA++
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQK 663
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
A ++ ++DP N +V++ +++A +G WE + +R SMK VKK PG S I I+ +H
Sbjct: 664 AAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIH 723
Query: 471 EFVAGDETHPQAKGIF----EMWEKLL 493
F A D HP+ I+ +W ++L
Sbjct: 724 IFFAEDIFHPERDDIYTVLHNIWSQML 750
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 154/353 (43%), Gaps = 33/353 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V + S + +++ G + I L+L++ Q ++PD F ++KAC SSD+ G+ +HA
Sbjct: 133 LVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHA 192
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V KL S+LI QN L+ +Y + F++M
Sbjct: 193 QVIKLESSSHLIAQNALIAMY----------VRFNQMSD--------------------- 221
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVACA 231
A +F +P +++ SW+S+I+G ++ G EAL EM G PNE + L AC+
Sbjct: 222 ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
L ++G IH + N +L DMY +CG L RVFD + SW+
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
+I G A + M SG P+ ++ +L A + + +G + + + + +
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-W 400
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKN 404
G + + L+ + + L + + + V W +L C H+
Sbjct: 401 GFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ 453
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 148/327 (45%), Gaps = 39/327 (11%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
L+ AC+ S + GR IH ++ + + IL N +L +Y CG
Sbjct: 73 LICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGS--------------- 117
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
+ AR++FD MP RN+ S+TSVI+G ++ G EA+R++ +M +
Sbjct: 118 ----------------LRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ 161
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
E P++ +++ ACA D+ GK +H ++ NALI MYV+ + +
Sbjct: 162 EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD 221
Query: 274 GCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM-KPNHVTFIGVLHACS 332
RVF G+ + ++SWSS+I GF+ M+ G+ PN F L ACS
Sbjct: 222 ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 333 HVGLVDKGREFFTIMRRDYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNGVV 391
+ D G + + + + G GC L D+ +R G L AR V + P+
Sbjct: 282 SLLRPDYGSQIHGLCIKSE--LAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTAS 338
Query: 392 WGALLGGCRLHKNIKLAEEAMRHLSEL 418
W ++ G N A+EA+ S++
Sbjct: 339 WNVIIAGL---ANNGYADEAVSVFSQM 362
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 191/465 (41%), Gaps = 55/465 (11%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRIIH 111
++ W+S + F++ G + +S + + P+ + LKAC+ G IH
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
K N I L +YA CG +
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGF-------------------------------LN 322
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+AR +FD + R + SW +I+GLA G ++EA+ VFS+M G P+ +++ ++L A
Sbjct: 323 SARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 382
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT-VVSWS 290
+ L G IH + GFL ++ VCN+L+ MY C L +F+ R VSW+
Sbjct: 383 KPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWN 442
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
+++ H M+ S +P+H+T +L C + + G + +
Sbjct: 443 TILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT 502
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
G+ P L+D+ ++ G L +AR + +M + V W L+ G + EE
Sbjct: 503 -GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVG---YAQSGFGEE 557
Query: 411 AMRHLSELDPL----NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR-GVKKTPGCSSITI 465
A+ E+ N +V + + G EE ++ +M++ G+ T S +
Sbjct: 558 ALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVV 617
Query: 466 D-----GVVHE---FVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 502
D G ++E F+ + P +W+ LL K +G +
Sbjct: 618 DLLARAGRLNEAERFIDEMKLEPDVV----VWKTLLSACKTQGNV 658
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 14/232 (6%)
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEV-TVVAVLVACAQLGDLEFGKSIHRFAEGNG 250
I+ L K EAL F ++ S + T ++++ AC+ L G+ IH +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 251 FLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 310
+ + N ++ MY KCG L + VFD M ER +VS++S+I G++ +
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 311 XMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHY---GCLVDLL 367
M++ + P+ F ++ AC+ V G++ + + + H L+ +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK----LESSSHLIAQNALIAMY 213
Query: 368 SRAGRLEEAREVIANMSVPPNGVV-WGALLGGCRLHKNIKLAEEAMRHLSEL 418
R ++ +A V +P ++ W +++ G + EA+ HL E+
Sbjct: 214 VRFNQMSDASRVF--YGIPMKDLISWSSIIAG---FSQLGFEFEALSHLKEM 260
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 206/354 (58%), Gaps = 1/354 (0%)
Query: 120 QSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDS 179
+ +LI N ++ Y G A+ +FD MP++DV TW MI G V A+ LFD
Sbjct: 249 EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQ 308
Query: 180 MPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR-PNEVTVVAVLVACAQLGDLEF 238
MP R+V ++ S+++G + EAL +FS+ME+E P++ T+V VL A AQLG L
Sbjct: 309 MPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 368
Query: 239 GKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAM 298
+H + F + ALIDMY KCG ++ VF+G+ +++ W++MI G A+
Sbjct: 369 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 428
Query: 299 HXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVE 358
H + R +KP+ +TF+GVL+ACSH GLV +G F +MRR + I P ++
Sbjct: 429 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 488
Query: 359 HYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
HYGC+VD+LSR+G +E A+ +I M V PN V+W L C HK + E +HL
Sbjct: 489 HYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 548
Query: 419 DPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
N YV++SN+YA G W++V R+R MK R ++K PGCS I +DG VHEF
Sbjct: 549 AGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 186/376 (49%), Gaps = 27/376 (7%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WN+ +K + P + L + + + D F+ S +LKAC+ + G IH +++
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K G S+L LQN L+ LY CG +R MFD+MP++D ++N MI + G + +AR+
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 176 LFDSMP--RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
LFD MP +N+ SW S+ISG A+ + + + + S++ + + ++ +++ +
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQ---TSDGVDIASKLFADMPEKDLISWNSMIDGYVKH 265
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
G +E K + R+V +ID Y K G + +FD M R VV+++SM+
Sbjct: 266 GRIEDAKGLFDVMPR----RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMM 321
Query: 294 VGFAMHXXXXXXXXXXXXMIR-SGMKPNHVTFIGVLHACSHVGLVDKGRE--FFTIMRRD 350
G+ + M + S + P+ T + VL A + +G + K + + + ++
Sbjct: 322 AGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQF 381
Query: 351 Y-GIVPGVEHYGCLVDLLSRAGRLEEAR---EVIANMSVPPNGVVWGALLGGCRLHKNIK 406
Y G GV L+D+ S+ G ++ A E I N S+ W A++GG +H
Sbjct: 382 YLGGKLGV----ALIDMYSKCGSIQHAMLVFEGIENKSIDH----WNAMIGGLAIH---G 430
Query: 407 LAEEAMRHLSELDPLN 422
L E A L +++ L+
Sbjct: 431 LGESAFDMLLQIERLS 446
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 247/476 (51%), Gaps = 51/476 (10%)
Query: 16 THLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISL 75
T H + N H A ++ D +P +++ ++ + P +
Sbjct: 51 TAFLHLPNLNKHFHYASSIF----------DSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 76 FLRL---RQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLG-FQSNLILQNMLLH 131
FL + + I P + T FL+ AC + G+ IH +V K G F S+ +Q +L
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 132 LYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSV 191
+Y +L+FD AR +FD +P+ +V W +
Sbjct: 161 IYVE------DKLLFD-------------------------ARKVFDEIPQPDVVKWDVL 189
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
++G +CG+ E L VF EM G P+E +V L ACAQ+G L GK IH F + +
Sbjct: 190 MNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRW 249
Query: 252 LR-NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 310
+ +V+V AL+DMY KCGC+E VF+ + R V SW+++I G+A +
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLD 309
Query: 311 XMIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSR 369
+ R G+KP+ V +GVL AC+H G +++GR M YGI P EHY C+VDL+ R
Sbjct: 310 RIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCR 369
Query: 370 AGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLN----DGY 425
AGRL++A ++I M + P VWGALL GCR HKN++L E A+++L +L+ N +
Sbjct: 370 AGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAA 429
Query: 426 YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 481
V +SN+Y + E ++R ++ RG++KTPG S + +DG+V +FV+GD +HP
Sbjct: 430 LVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPN 485
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 240/464 (51%), Gaps = 38/464 (8%)
Query: 54 VPWNSCLKFFAERGAPCDTISLF--LRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
V W + + F G + ++ + L + P + + ++A + TG+ IH
Sbjct: 179 VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP--YCITIAVRASASIDSVTTGKQIH 236
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
A V K GFQSNL + N +L LY CG S A+ F +M +D+ T
Sbjct: 237 ASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT--------------- 281
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
W ++IS L + S EAL +F E +G PN T +++ ACA
Sbjct: 282 ----------------WNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACA 324
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER-TVVSWS 290
+ L G+ +H GF +NV + NALIDMY KCG + + RVF + +R +VSW+
Sbjct: 325 NIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWT 384
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
SM++G+ H M+ SG++P+ + F+ VL AC H GLV+KG ++F +M +
Sbjct: 385 SMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK-NIKLAE 409
YGI P + Y C+VDLL RAG++ EA E++ M P+ WGA+LG C+ HK N ++
Sbjct: 445 YGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISR 504
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
A R + EL P G YV++S +YA GKW + +R+R+ M+ G KK G S I ++ V
Sbjct: 505 LAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQV 564
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDME 513
F D+ P A ++ + L+ + + GY+P+ ++ D E
Sbjct: 565 FSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 115/241 (47%), Gaps = 6/241 (2%)
Query: 158 NIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR 217
N+++ + G V AR LFD MP R+V +WT++I+G A + A F EM ++G+
Sbjct: 50 NLIVSYF-EKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 218 PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCG-CLEEGCR 276
PNE T+ +VL +C + L +G +H G ++YV NA+++MY C +E C
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 277 VFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGL 336
+F ++ + V+W+++I GF M+ + + A + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 337 VDKGREFF-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGAL 395
V G++ ++++R G + ++DL R G L EA+ M + + W L
Sbjct: 229 VTTGKQIHASVIKR--GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTL 285
Query: 396 L 396
+
Sbjct: 286 I 286
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ WN+ + ER + + +F R +P+ +T + L+ AC + + G+ +H
Sbjct: 279 LITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM-PQQDVATWNIMIGHLISAGDVG 171
+ + GF N+ L N L+ +YA CG ++ +F ++ ++++ +W M+ S G
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 172 AARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEMERE-GSRPN 219
A +LFD M +R + +V+S G+ E+ L+ F+ ME E G P+
Sbjct: 398 EAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPD 450
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 219/423 (51%), Gaps = 33/423 (7%)
Query: 82 LSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSH 141
L + P+ T + LL+ C + G+ IHA + +GF N L+ LL LYA
Sbjct: 104 LQVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYAL------ 155
Query: 142 ARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMS 201
+GD+ A LF S+ R++ W ++ISG + G+
Sbjct: 156 -------------------------SGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLE 190
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
+E L ++ +M + P++ T +V AC+ L LE GK H N+ V +AL
Sbjct: 191 QEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSAL 250
Query: 262 IDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
+DMY KC +G RVFD + R V++W+S+I G+ H M G +PN
Sbjct: 251 VDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNP 310
Query: 322 VTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 381
VTF+ VL AC+H GLVDKG E F M+RDYGI P +HY +VD L RAGRL+EA E +
Sbjct: 311 VTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVM 370
Query: 382 NMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEE 441
+ VWG+LLG CR+H N+KL E A ELDP N G YVV +N YA G E
Sbjct: 371 KSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREA 430
Query: 442 VSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 501
S++RR M++ GVKK PG S I + G VH F+ D +H ++ I++ ++ Y
Sbjct: 431 ASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDY 490
Query: 502 IPD 504
PD
Sbjct: 491 YPD 493
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++PWN+ + + ++G + + ++ +RQ I+PD +T + + +AC+ + G+ HA
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K +SN+I+ + L+ +Y C S +FD++ ++V TW
Sbjct: 234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITW--------------- 278
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
TS+ISG G E L+ F +M+ EG RPN VT + VL AC
Sbjct: 279 ----------------TSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNH 322
Query: 233 LGDLEFG 239
G ++ G
Sbjct: 323 GGLVDKG 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 96/245 (39%), Gaps = 13/245 (5%)
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDL 236
F +R + GL G +EA+ + + G + T +L C Q +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 237 EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGF 296
GK IH GF N Y+ L+ +Y G L+ +F ++ R ++ W++MI G+
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPG 356
M ++ + P+ TF V ACS + ++ G+ +M + I
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKR-CIKSN 243
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI--------KLA 408
+ LVD+ + + V +S N + W +L+ G H + K+
Sbjct: 244 IIVDSALVDMYFKCSSFSDGHRVFDQLST-RNVITWTSLISGYGYHGKVSEVLKCFEKMK 302
Query: 409 EEAMR 413
EE R
Sbjct: 303 EEGCR 307
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 229/447 (51%), Gaps = 31/447 (6%)
Query: 71 DTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLL 130
D + LF +R+ + P+ T L AC+ S IV G+ IHA + K G +S L +++ L+
Sbjct: 239 DGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALM 298
Query: 131 HLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTS 190
+Y+ CG A W I F+S + S T
Sbjct: 299 DMYSKCGSIEDA--------------WTI-----------------FESTTEVDEVSMTV 327
Query: 191 VISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNG 250
++ GLA+ G EEA++ F M + G + V AVL L GK +H
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRK 387
Query: 251 FLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 310
F N +V N LI+MY KCG L + VF M +R VSW+SMI FA H
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYE 447
Query: 311 XMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRA 370
M +KP VTF+ +LHACSHVGL+DKGRE M+ +GI P EHY C++D+L RA
Sbjct: 448 EMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRA 507
Query: 371 GRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMS 430
G L+EA+ I ++ + P+ +W ALLG C H + ++ E A L + P + +++++
Sbjct: 508 GLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIA 567
Query: 431 NVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWE 490
N+Y+ GKW+E ++ + MK+ GV K G SSI I+ H FV D+ HPQA+ I+++
Sbjct: 568 NIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLS 627
Query: 491 KLLVKMKMKGYIPDTSVVLLDMEDEQK 517
L M +GY PD +L D++
Sbjct: 628 GLFPVMVDEGYRPDKRFILCYTGDDRN 654
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 166/401 (41%), Gaps = 77/401 (19%)
Query: 49 HVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILP---------------------- 86
H A+V WNS L +A+ G D I LF + ++
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145
Query: 87 --------DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGE 138
DH T + +L C + ++IHA G+ + + N L+ Y CG
Sbjct: 146 RMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 139 TSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKC 198
+ + R +FD M RNV + T+VISGL +
Sbjct: 206 SV-------------------------------SGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 199 GMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVC 258
+ E+ LR+FS M R PN VT ++ L AC+ + G+ IH G + +
Sbjct: 235 ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE 294
Query: 259 NALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMK 318
+AL+DMY KCG +E+ +F+ E VS + ++VG A + M+++G++
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 319 PNHVTFIGVLHACSHVGLVDK----GREFFT-IMRRDYGIVPGVEHYGCLVDLLSRAGRL 373
+ V+ A V +D G++ + +++R + V + L+++ S+ G L
Sbjct: 355 ID----ANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNN--GLINMYSKCGDL 408
Query: 374 EEAREVIANMSVPPNGVVWGALLGGCRLHKN----IKLAEE 410
+++ V M N V W +++ H + +KL EE
Sbjct: 409 TDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 63 FAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSN 122
A+ G+ + I F+R+ Q + D S +L I + + G+ +H+ V K F N
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 123 LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPR 182
+ N L+++Y+ CG+ + ++ +F +MP+++ +WN
Sbjct: 392 TFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWN------------------------ 427
Query: 183 RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKS- 241
S+I+ A+ G AL+++ EM +P +VT +++L AC+ +G ++ G+
Sbjct: 428 -------SMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGREL 480
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
++ E +G +IDM + G L+E D +
Sbjct: 481 LNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSL 520
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 232/426 (54%), Gaps = 35/426 (8%)
Query: 41 PLSHVDLAHVPA--IVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKA 97
P S H+P I WN + F+ G +I LFLR+ R+ + PD FT +L+A
Sbjct: 84 PTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRA 143
Query: 98 CTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATW 157
C+ S + +G +IH KLGF S+L + + L+ +Y G+ HAR
Sbjct: 144 CSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR-------------- 189
Query: 158 NIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR 217
LFD MP R+ +T++ G + G + L +F EM G
Sbjct: 190 -----------------KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 232
Query: 218 PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRV 277
+ V +V++L+AC QLG L+ GKS+H + + + NA+ DMYVKC L+ V
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 278 FDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
F M R V+SWSS+I+G+ + M++ G++PN VTF+GVL AC+H GLV
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV 352
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLG 397
+K +F +M+ +Y IVP ++HY + D +SRAG LEEA + + +M V P+ V GA+L
Sbjct: 353 EKSWLYFRLMQ-EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLS 411
Query: 398 GCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT 457
GC+++ N+++ E R L +L P YYV ++ +Y+ AG+++E +R+ MK + + K
Sbjct: 412 GCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKV 471
Query: 458 PGCSSI 463
PGCSSI
Sbjct: 472 PGCSSI 477
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/440 (35%), Positives = 235/440 (53%), Gaps = 34/440 (7%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
IV WNS + +A RG + LF ++ I PD FT + + AC + + G+ IH
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHG 429
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+V + S+ +QN L+ +Y+ +G V +
Sbjct: 430 HVIRTDV-SDEFVQNSLIDMYSK-------------------------------SGSVDS 457
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A +F+ + R+V +W S++ G ++ G S EA+ +F M NEVT +AV+ AC+
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSS 517
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+G LE GK +H +G L++++ ALIDMY KCG L VF M R++VSWSSM
Sbjct: 518 IGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSM 576
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I + MH M+ SG KPN V F+ VL AC H G V++G+ +F +M+ +G
Sbjct: 577 INAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK-SFG 635
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ P EH+ C +DLLSR+G L+EA I M + VWG+L+ GCR+H+ + + +
Sbjct: 636 VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK 695
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
LS++ + GYY ++SN+YAE G+WEE R+R +MKS +KK PG S+I ID V F
Sbjct: 696 NDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRF 755
Query: 473 VAGDETHPQAKGIFEMWEKL 492
AG+E Q I+ L
Sbjct: 756 GAGEENRIQTDEIYRFLGNL 775
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 157/328 (47%), Gaps = 39/328 (11%)
Query: 73 ISLFLRLRQLSILPDHFTCSFLLKACTISSD-IVTGRIIHAYVQKLGFQSNLILQNMLLH 131
I L+ RL + F +L+AC S + + G +H + K G + +++ LL
Sbjct: 85 IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLC 144
Query: 132 LYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSV 191
+Y G+T G++ A +FD MP R++ +W+++
Sbjct: 145 MY---GQT----------------------------GNLSDAEKVFDGMPVRDLVAWSTL 173
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
+S + G +ALR+F M +G P+ VT+++V+ CA+LG L +S+H F
Sbjct: 174 VSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMF 233
Query: 252 LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 311
+ +CN+L+ MY KCG L R+F+ + ++ VSW++MI +
Sbjct: 234 DLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSE 293
Query: 312 MIRSGMKPNHVTFIGVLHACSHVGLVDKGREF--FTIMRRDYGIVPGVEHYG-CLVDLLS 368
MI+SG++PN VT VL +C +GL+ +G+ F + R + P E LV+L +
Sbjct: 294 MIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE---LDPNYESLSLALVELYA 350
Query: 369 RAGRLEEAREVIANMSVPPNGVVWGALL 396
G+L + V+ +S N V W +L+
Sbjct: 351 ECGKLSDCETVLRVVS-DRNIVAWNSLI 377
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 160/357 (44%), Gaps = 37/357 (10%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
V +V W++ + E G + +F + + PD T +++ C + R
Sbjct: 164 VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARS 223
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H + + F + L N LL +Y+ CG D
Sbjct: 224 VHGQITRKMFDLDETLCNSLLTMYSKCG-------------------------------D 252
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+ ++ +F+ + ++N SWT++IS + SE+ALR FSEM + G PN VT+ +VL +
Sbjct: 253 LLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCN-ALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
C +G + GKS+H FA N + AL+++Y +CG L + V + +R +V+
Sbjct: 313 CGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVA 372
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT-IM 347
W+S+I +A M+ +KP+ T + AC + GLV G++ ++
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKN 404
R D V L+D+ S++G ++ A V N + V W ++L G + N
Sbjct: 433 RTD---VSDEFVQNSLIDMYSKSGSVDSASTVF-NQIKHRSVVTWNSMLCGFSQNGN 485
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 41/334 (12%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W + + + + F + + I P+ T +L +C + I G+ +H +
Sbjct: 269 VSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Query: 114 VQKLGFQSNL-ILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ N L L+ LYA CG+ S + +
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD--------------------- 367
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
RN+ +W S+IS A GM +AL +F +M + +P+ T+ + + AC
Sbjct: 368 ----------RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
G + GK IH + + +V N+LIDMY K G ++ VF+ ++ R+VV+W+SM
Sbjct: 418 AGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
+ GF+ + M S ++ N VTF+ V+ ACS +G ++KG+ +
Sbjct: 477 LCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL----- 531
Query: 353 IVPGVEHY---GCLVDLLSRAGRLEEAREVIANM 383
I+ G++ L+D+ ++ G L A V M
Sbjct: 532 IISGLKDLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 33/249 (13%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++V WNS L F++ G + ISLF + + + T +++AC+ + G+ +H
Sbjct: 469 SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH 528
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+ G + +L L+ +YA CG+ + A +F M + + +W+ MI G +G
Sbjct: 529 HKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIG 587
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+ A+ F++M G++PNEV + VL AC
Sbjct: 588 S-------------------------------AISTFNQMVESGTKPNEVVFMNVLSACG 616
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS-WS 290
G +E GK + G N ID+ + G L+E R M S W
Sbjct: 617 HSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWG 676
Query: 291 SMIVGFAMH 299
S++ G +H
Sbjct: 677 SLVNGCRIH 685
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 244/476 (51%), Gaps = 51/476 (10%)
Query: 16 THLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISL 75
T H + N H A ++ D +P +++ ++ + P +
Sbjct: 51 TAFLHLPNLNKHFHYASSIF----------DSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 76 FLRL---RQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLG-FQSNLILQNMLLH 131
FL + + I P + T FL+ AC + G+ IH +V K G F S+ +Q +L
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 132 LYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSV 191
+Y +L+ D AR +FD +P+ +V W +
Sbjct: 161 IYVE------DKLLLD-------------------------ARKVFDEIPQPDVVKWDVL 189
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
++G +CG+ E L VF EM +G P+E +V L ACAQ+G L GK IH F + +
Sbjct: 190 MNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSW 249
Query: 252 LR-NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 310
+ +V+V AL+DMY KCGC+E VF + R V SW+++I G+A +
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLE 309
Query: 311 XMIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSR 369
+ R G+KP+ V +GVL AC+H G +++GR M Y I P EHY C+VDL+ R
Sbjct: 310 RLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCR 369
Query: 370 AGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLN----DGY 425
AGRL++A +I M + P VWGALL GCR HKN++L E A+++L +L+ N +
Sbjct: 370 AGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAA 429
Query: 426 YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 481
V +SN+Y + E S++R ++ RGV+KTPG S + +DG V +FV+GD +HP
Sbjct: 430 LVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPN 485
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 230/427 (53%), Gaps = 39/427 (9%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH-- 111
V WNS + ++E G D + LF ++ + PD T +L AC+ D+ TGR++
Sbjct: 199 VSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEM 258
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
A +K+G + L + L+ +Y CG D+
Sbjct: 259 AITKKIGLST--FLGSKLISMYGKCG-------------------------------DLD 285
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+AR +F+ M +++ +WT++I+ ++ G S EA ++F EME+ G P+ T+ VL AC
Sbjct: 286 SARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACG 345
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+G LE GK I A N+YV L+DMY KCG +EE RVF+ M + +W++
Sbjct: 346 SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNA 405
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI +A M + P+ +TFIGVL AC H GLV +G +F M +
Sbjct: 406 MITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMF 462
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G+VP +EHY ++DLLSRAG L+EA E + P+ ++ A+LG C K++ + E+A
Sbjct: 463 GLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKA 522
Query: 412 MRHLSEL-DPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
MR L E+ + N G YV+ SNV A+ W+E +++R M+ RGV KTPGCS I I+G +
Sbjct: 523 MRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELM 582
Query: 471 EFVAGDE 477
EF+AG +
Sbjct: 583 EFLAGSD 589
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 33/325 (10%)
Query: 72 TISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLH 131
+SL+ R++ + PD FT +F+ AC +I GR +H+ + K+G + ++ + + L+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 132 LYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSV 191
+YA CG+ VG AR LFD + R+ SW S+
Sbjct: 176 MYAKCGQ-------------------------------VGYARKLFDEITERDTVSWNSM 204
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
ISG ++ G +++A+ +F +ME EG P+E T+V++L AC+ LGDL G+ + A
Sbjct: 205 ISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKI 264
Query: 252 LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 311
+ ++ + LI MY KCG L+ RVF+ M ++ V+W++MI ++ +
Sbjct: 265 GLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 312 MIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAG 371
M ++G+ P+ T VL AC VG ++ G++ T + + + LVD+ + G
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIET-HASELSLQHNIYVATGLVDMYGKCG 383
Query: 372 RLEEAREVIANMSVPPNGVVWGALL 396
R+EEA V M V N W A++
Sbjct: 384 RVEEALRVFEAMPV-KNEATWNAMI 407
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/466 (31%), Positives = 246/466 (52%), Gaps = 37/466 (7%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN+ + F + G + + L +++ D+ T + LL A + + G+ HA
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDK--MPQQDVATWNIMIGHLISAGDV 170
++ + G Q + + L+ +Y+ G ++ +F+ ++D ATWN
Sbjct: 444 FLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWN------------ 490
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
S+ISG + G +E+ VF +M + RPN VTV ++L AC
Sbjct: 491 -------------------SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPAC 531
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+Q+G ++ GK +H F+ +NV+V +AL+DMY K G ++ +F +ER V+++
Sbjct: 532 SQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYT 591
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
+MI+G+ H M SG+KP+ +TF+ VL ACS+ GL+D+G + F MR
Sbjct: 592 TMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV 651
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN-GVVWGALLGGCRLHKNIKLAE 409
Y I P EHY C+ D+L R GR+ EA E + + N +WG+LLG C+LH ++LAE
Sbjct: 652 YNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAE 711
Query: 410 EAMRHLSELDPLND--GYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
L++ D + GY V++SN+YAE KW+ V ++RR M+ +G+KK G S I I G
Sbjct: 712 TVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAG 771
Query: 468 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDME 513
V+ FV+ D+ HP + I+++ + L M+ ++ V +E
Sbjct: 772 YVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLE 817
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 41/352 (11%)
Query: 56 WNSCLKFFAERGAPCDTISLFLR-LRQLSILPDHFTCSFLLKACTISS--DIVTGRIIHA 112
WN+ + + + ++I LFL + I+ D T +LL A +S+ + GR H
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVT--YLLAASAVSALQQVELGRQFHG 342
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+V K + +++ N L+ +Y+ CG + +F M ++DV +WN M
Sbjct: 343 FVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTM------------ 390
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
IS + G+ +E L + EM+++G + + +TV A+L A +
Sbjct: 391 -------------------ISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASN 431
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFD--GMRERTVVSWS 290
L + E GK H F G ++ + + LIDMY K G + ++F+ G ER +W+
Sbjct: 432 LRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWN 490
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
SMI G+ + M+ ++PN VT +L ACS +G VD G++ R
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
Y + V LVD+ S+AG ++ A ++ + + N V + ++ G H
Sbjct: 551 Y-LDQNVFVASALVDMYSKAGAIKYAEDMFSQ-TKERNSVTYTTMILGYGQH 600
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 184/474 (38%), Gaps = 94/474 (19%)
Query: 7 TLPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAER 66
TL PQ P Q+ + + AR L D P V WN+ + F
Sbjct: 34 TLTPQTPSIRSRLSKICQDGNPQLARQLF----------DAIPKPTTVLWNTIIIGFICN 83
Query: 67 GAPCDTISLFLRLRQLSILP--DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLI 124
P + + + R+++ + D +T S LKAC + ++ G+ +H ++ + S+ +
Sbjct: 84 NLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV 143
Query: 125 LQNMLLHLYAS------CGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFD 178
+ N L+++Y S C E R +FD M +++V WN +I + G A F
Sbjct: 144 VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFG 203
Query: 179 SMPRRNVRSW-----------------------------------------TSVISGLAK 197
M R V+ +S IS A+
Sbjct: 204 IMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAE 263
Query: 198 CGMSEEALRVFSE-----------------------------MEREGSR---PNEVTVVA 225
G E + RVF +E GS+ +EVT +
Sbjct: 264 LGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLL 323
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
A + L +E G+ H F N + + N+L+ MY +CG + + VF MRER
Sbjct: 324 AASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERD 383
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
VVSW++MI F + M + G K +++T +L A S++ + G++
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP-NGVVWGALLGG 398
+ R G+ Y L+D+ S++G + ++++ + W +++ G
Sbjct: 444 FLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISG 495
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 226/438 (51%), Gaps = 31/438 (7%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W S + + G + F+++R + P+ T + + AC S +V G +H
Sbjct: 275 VVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHC 334
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V LG +L + N ++ +Y++CG +L+SA
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMYSTCG-------------------------NLVSASV--- 366
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
LF M R++ SW+++I G + G EE + FS M + G++P + + ++L
Sbjct: 367 ---LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ +E G+ +H A G +N V ++LI+MY KCG ++E +F +VS ++M
Sbjct: 424 MAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAM 483
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G+A H ++ G +P+ VTFI VL AC+H G +D G +F +M+ Y
Sbjct: 484 INGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYN 543
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
+ P EHYGC+VDLL RAGRL +A ++I MS + VVW LL C+ +I+ A
Sbjct: 544 MRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAA 603
Query: 413 RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEF 472
+ ELDP V ++N+Y+ G EE + +R++MK++GV K PG SSI I V F
Sbjct: 604 ERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAF 663
Query: 473 VAGDETHPQAKGIFEMWE 490
V+GD HPQ++ I+ + E
Sbjct: 664 VSGDRFHPQSEDIYNILE 681
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 161/366 (43%), Gaps = 38/366 (10%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQL--SILPDHFTCSFLLKACTISSDIVTGRII 110
IV W S +K + + + LF +R + ++ PD S +LKAC SS+I G +
Sbjct: 71 IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
HAY K S++ + + LL +Y G+ DK +
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGK-------IDKSCR------------------- 164
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
+F MP RN +WT++I+GL G +E L FSEM R + T L AC
Sbjct: 165 -----VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC 219
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
A L +++GK+IH GF+ + V N+L MY +CG +++G +F+ M ER VVSW+
Sbjct: 220 AGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWT 279
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S+IV + M S + PN TF + AC+ + + G + +
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV-LS 338
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
G+ + ++ + S G L A + M + + W ++GG + EE
Sbjct: 339 LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC-RDIISWSTIIGG---YCQAGFGEE 394
Query: 411 AMRHLS 416
++ S
Sbjct: 395 GFKYFS 400
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 148/344 (43%), Gaps = 40/344 (11%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W + + G + ++ F + + L D +T + LKAC + G+ IH +
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
V GF + L + N L +Y CGE M D +
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGE------MQDGLC----------------------- 265
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
LF++M R+V SWTS+I + G +A+ F +M PNE T ++ ACA L
Sbjct: 266 --LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
L +G+ +H G ++ V N+++ MY CG L +F GMR R ++SWS++I
Sbjct: 324 SRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTII 383
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
G+ M +SG KP +L ++ +++ GR+ + +G+
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALA-LCFGL 442
Query: 354 VPGVEHYGCLVDLLSRAGRLEEA--------REVIANMSVPPNG 389
L+++ S+ G ++EA R+ I +++ NG
Sbjct: 443 EQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 11/285 (3%)
Query: 164 LISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME--REGSRPNEV 221
LI+AG++ AAR +FD MP ++ SWTS+I S+EAL +FS M P+
Sbjct: 50 LINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTS 109
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
+ VL AC Q ++ +G+S+H +A L +VYV ++L+DMY + G +++ CRVF M
Sbjct: 110 VLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 282 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGR 341
R V+W+++I G M RS + TF L AC+ + V G+
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 342 EFFT--IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
T I+R G V + L + + G +++ + NMS + V W +L+
Sbjct: 230 AIHTHVIVR---GFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAY 285
Query: 400 -RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGK--WEE 441
R+ + +K E ++ + P N+ + M + A + W E
Sbjct: 286 KRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGE 330
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 235/455 (51%), Gaps = 35/455 (7%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCD---TISLFLRLRQLSILPDHFTCSFLLKACTISS 102
D+ +V +N+ ++ ++ G + +++F +R I P T LL+A +
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 103 DIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIG 162
+ + IH + K G ++ + L+ +Y++C +RL+FD+M +D+
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVI------ 522
Query: 163 HLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
W S+ +G + +EEAL +F E++ RP+E T
Sbjct: 523 -------------------------WNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
++ A L ++ G+ H G N Y+ NAL+DMY KCG E+ + FD
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAA 617
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
R VV W+S+I +A H M+ G++PN++TF+GVL ACSH GLV+ G +
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLK 677
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
F +M R +GI P EHY C+V LL RAGRL +ARE+I M P +VW +LL GC
Sbjct: 678 QFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKA 736
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSS 462
N++LAE A DP + G + ++SN+YA G W E ++R MK GV K PG S
Sbjct: 737 GNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSW 796
Query: 463 ITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMK 497
I I+ VH F++ D++H +A I+E+ + LLV+++
Sbjct: 797 IGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 169/354 (47%), Gaps = 44/354 (12%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+ V W + + + G ++ LF +L + +++PD + S +L AC+I + G+ IH
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
A++ + G + + L N+L+ Y C G V
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKC-------------------------------GRVI 301
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
AA LF+ MP +N+ SWT+++SG + + +EA+ +F+ M + G +P+ ++L +CA
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
L L FG +H + + YV N+LIDMY KC CL + +VFD VV +++
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNA 421
Query: 292 MIVGFA-------MHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
MI G++ +H +IR P+ +TF+ +L A + + + ++
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIR----PSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+M + YG+ + L+D+ S L+++R V M V + V+W ++ G
Sbjct: 478 GLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFAG 529
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 160/368 (43%), Gaps = 42/368 (11%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
I+ W + L + + + + LF + + + PD + CS +L +C + G +HA
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y K ++ + N L+ +YA C + AR +FD DV +N M
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM------------ 422
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMS---EEALRVFSEMEREGSRPNEVTVVAVLVA 229
I G ++ G EAL +F +M RP+ +T V++L A
Sbjct: 423 -------------------IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
A L L K IH G +++ +ALID+Y C CL++ VFD M+ + +V W
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF-TIMR 348
+SM G+ + S +P+ TF ++ A ++ V G+EF +++
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH----KN 404
R P + + L+D+ ++ G E+A + + + + V W +++ H K
Sbjct: 584 RGLECNPYITN--ALLDMYAKCGSPEDAHKAF-DSAASRDVVCWNSVISSYANHGEGKKA 640
Query: 405 IKLAEEAM 412
+++ E+ M
Sbjct: 641 LQMLEKMM 648
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 128/274 (46%), Gaps = 12/274 (4%)
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME 212
D NI+I AG + AR +F+ MP RN+ SW++++S G+ EE+L VF E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 213 R-EGSRPNEVTVVAVLVACAQLGD----LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVK 267
R PNE + + + AC+ L + F + F +GF R+VYV LID Y+K
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 268 CGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGV 327
G ++ VFD + E++ V+W++MI G ++ + P+ V
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 328 LHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 387
L ACS + ++ G++ + R YG+ L+D + GR+ A ++ M
Sbjct: 256 LSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NK 313
Query: 388 NGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL 421
N + W LL G +K L +EAM + +
Sbjct: 314 NIISWTTLLSG---YKQNALHKEAMELFTSMSKF 344
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 136/261 (52%), Gaps = 7/261 (2%)
Query: 152 QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM 211
+DV ++I + G++ AR +FD++P ++ +WT++ISG K G S +L++F ++
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 212 EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
+ P+ + VL AC+ L LE GK IH G + + N LID YVKCG +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 272 EEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHAC 331
++F+GM + ++SW++++ G+ + M + G+KP+ +L +C
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 332 SHVGLVDKGREF--FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNG 389
+ + + G + +TI + + G V + L+D+ ++ L +AR+V ++ +
Sbjct: 361 ASLHALGFGTQVHAYTI-KANLGNDSYVTN--SLIDMYAKCDCLTDARKVF-DIFAAADV 416
Query: 390 VVWGALLGG-CRLHKNIKLAE 409
V++ A++ G RL +L E
Sbjct: 417 VLFNAMIEGYSRLGTQWELHE 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 9/181 (4%)
Query: 250 GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 309
G + Y+ N LI++Y + G + +VF+ M ER +VSWS+M+ H
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 310 XXMIRSGM-KPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVE---HYGC-LV 364
R+ PN + ACS GL +GR + + + + G + + G L+
Sbjct: 134 LEFWRTRKDSPNEYILSSFIQACS--GLDGRGR-WMVFQLQSFLVKSGFDRDVYVGTLLI 190
Query: 365 DLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDG 424
D + G ++ AR V + + V W ++ GC ++ + L E + + DG
Sbjct: 191 DFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG 249
Query: 425 Y 425
Y
Sbjct: 250 Y 250
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 218/405 (53%), Gaps = 3/405 (0%)
Query: 60 LKFFAERGAPCDTISLFLRLRQLSILP-DHFTCSFLLKACTISSDIVTGRIIHAYVQKLG 118
L +A +G ++LFL++ LP D S LK+C + V G +HA+ K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 119 FQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFD 178
F SN + LL +Y C SHAR +FD++PQ++ WN MI H G V A +L++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 179 SMP-RRNVRSWTSVISGLAKC-GMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDL 236
+M N S+ ++I GL S A+ + +M +PN +T++A++ AC+ +G
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 237 EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGF 296
K IH +A N + + + L++ Y +CG + VFD M +R VV+WSS+I +
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPG 356
A+H M + + P+ + F+ VL ACSH GL D+ +F M+ DYG+
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRAS 318
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLS 416
+HY CLVD+LSR GR EEA +VI M P WGALLG CR + I+LAE A R L
Sbjct: 319 KDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELL 378
Query: 417 ELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
++P N YV++ +Y G+ EE R+R MK GVK +PG S
Sbjct: 379 MVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 236/459 (51%), Gaps = 32/459 (6%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQL-SILPDHFTCSFLLKACTISSDIVTGRIIH 111
++ W + + + + G D LFLR+RQ + + T + + KAC G IH
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH 298
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
V ++ + +L L N L+ +Y+ G A+ +F M +D +WN +I L+ +
Sbjct: 299 GLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQIS 358
Query: 172 AARDLFDSMPRRNVRSWTSVISG------LAKC-------------------------GM 200
A +LF+ MP +++ SWT +I G ++KC G
Sbjct: 359 EAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGY 418
Query: 201 SEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNA 260
EEAL F +M ++ PN T +VL A A L DL G IH + ++ V N+
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS 478
Query: 261 LIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPN 320
L+ MY KCG + ++F + E +VS+++MI G++ + + SG +PN
Sbjct: 479 LVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 321 HVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 380
VTF+ +L AC HVG VD G ++F M+ Y I PG +HY C+VDLL R+G L++A +I
Sbjct: 539 GVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLI 598
Query: 381 ANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWE 440
+ M P+ VWG+LL + H + LAE A + L EL+P + YVV+S +Y+ GK
Sbjct: 599 STMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNR 658
Query: 441 EVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETH 479
+ RI KS+ +KK PG S I + G VH F+AGDE+
Sbjct: 659 DCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 108/254 (42%), Gaps = 10/254 (3%)
Query: 124 ILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRR 183
+ N+LL Y G+ + A +F M ++V + + M+ G + AR LFD M R
Sbjct: 178 VASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER 237
Query: 184 NVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVACAQLGDLEFGKSI 242
NV +WT++I G K G E+ +F M +EG + N T+ + AC G I
Sbjct: 238 NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI 297
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXX 302
H ++++ N+L+ MY K G + E VF M+ + VSW+S+I G
Sbjct: 298 HGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQI 357
Query: 303 XXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGC 362
M M V++ ++ S G + K E F +M I +
Sbjct: 358 SEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTA 408
Query: 363 LVDLLSRAGRLEEA 376
++ G EEA
Sbjct: 409 MISAFVSNGYYEEA 422
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 137/332 (41%), Gaps = 40/332 (12%)
Query: 121 SNLILQ-NMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDS 179
S I Q N + +A G A +F +M + + +W MI G + A +FD
Sbjct: 47 STAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDE 106
Query: 180 MPRRNVRSWTSVISGL--AKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLE 237
MP R S+ ++I+ + KC + +A +F ++ E + + T++ V + + E
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLG-KAYELFCDIP-EKNAVSYATMITGFVRAGRFDEAE 164
Query: 238 F--GKSIHRFAEG-------NGFLR-----------------NVYVCNALIDMYVKCGCL 271
F ++ +F + +G+LR V C++++ Y K G +
Sbjct: 165 FLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRI 224
Query: 272 EEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG-MKPNHVTFIGVLHA 330
+ +FD M ER V++W++MI G+ M + G +K N T + A
Sbjct: 225 VDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKA 284
Query: 331 CSHVGLVDKGREFFTIMRR---DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 387
C +G + ++ R ++ + G L+ + S+ G + EA+ V M
Sbjct: 285 CRDFVRYREGSQIHGLVSRMPLEFDLFLG----NSLMSMYSKLGYMGEAKAVFGVMK-NK 339
Query: 388 NGVVWGALLGGCRLHKNIKLAEEAMRHLSELD 419
+ V W +L+ G K I A E + D
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGKD 371
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 221/423 (52%), Gaps = 40/423 (9%)
Query: 43 SHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISS 102
SHVDL V W + + + G+ + +SLF +++ + I P+ T + +L C +
Sbjct: 304 SHVDL------VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIE 357
Query: 103 DIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIG 162
++ GR +H K+G + N L+H+YA C + A+ +F+ ++D+
Sbjct: 358 NLELGRSVHGLSIKVGIWDTNV-ANALVHMYAKCYQNRDAKYVFEMESEKDIV------- 409
Query: 163 HLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
+W S+ISG ++ G EAL +F M E PN VT
Sbjct: 410 ------------------------AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFL--RNVYVCNALIDMYVKCGCLEEGCRVFDG 280
V ++ ACA LG L G S+H ++ GFL +V+V AL+D Y KCG + +FD
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT 505
Query: 281 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKG 340
+ E+ ++WS+MI G+ M++ KPN TF +L AC H G+V++G
Sbjct: 506 IEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEG 565
Query: 341 REFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCR 400
+++F+ M +DY P +HY C+VD+L+RAG LE+A ++I M + P+ +GA L GC
Sbjct: 566 KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCG 625
Query: 401 LHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGC 460
+H L E ++ + +L P + YYV++SN+YA G+W + +R MK RG+ K G
Sbjct: 626 MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGH 685
Query: 461 SSI 463
S++
Sbjct: 686 STM 688
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 154/347 (44%), Gaps = 34/347 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W S + + + + + LF R+R+ ++L + +T L+ ACT S + G+ H
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K G + + L LL +Y CG D+
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCG-------------------------------DISN 295
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
AR +F+ ++ WT++I G G EAL +F +M+ +PN VT+ +VL C
Sbjct: 296 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGL 355
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ +LE G+S+H + G + + V NAL+ MY KC + VF+ E+ +V+W+S+
Sbjct: 356 IENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I GF+ + M + PN VT + AC+ +G + G +
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 353 IVPGVEHYG-CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ H G L+D ++ G + AR + + N + W A++GG
Sbjct: 475 LASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGG 520
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 150/381 (39%), Gaps = 64/381 (16%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P W L+ + + + L+ L + D S LKACT D+ G+ I
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H + K+ N++L LL +YA CGE +
Sbjct: 165 HCQLVKVPSFDNVVLTG-LLDMYAKCGE-------------------------------I 192
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
+A +F+ + RNV WTS+I+G K + EE L +F+ M NE T +++AC
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+L L GK H +G + + +L+DMYVKCG + RVF+ +V W+
Sbjct: 253 TKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWT 312
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI---- 346
+MIVG+ + M +KPN VT VL C + ++ GR +
Sbjct: 313 AMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKV 372
Query: 347 -------------------MRRDYGIVPGVEH------YGCLVDLLSRAGRLEEAREVIA 381
RD V +E + ++ S+ G + EA +
Sbjct: 373 GIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFH 432
Query: 382 NM---SVPPNGVVWGALLGGC 399
M SV PNGV +L C
Sbjct: 433 RMNSESVTPNGVTVASLFSAC 453
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 179/440 (40%), Gaps = 62/440 (14%)
Query: 91 CSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP 150
C LL CT +I + R H + G ++ + L+ LY G T ARL+FD++
Sbjct: 47 CFLLLSKCT---NIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQI- 102
Query: 151 QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSE 210
P + W ++ S E ++++
Sbjct: 103 ------------------------------PEPDFYLWKVMLRCYCLNKESVEVVKLYDL 132
Query: 211 MEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGC 270
+ + G R +++ L AC +L DL+ GK IH NV V L+DMY KCG
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGE 191
Query: 271 LEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
++ +VF+ + R VV W+SMI G+ + M + + N T+ ++ A
Sbjct: 192 IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA 251
Query: 331 CSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLV----DLLSRAGRLEEAREVIANMSVP 386
C+ + + +G+ F + + G+E CLV D+ + G + AR V N
Sbjct: 252 CTKLSALHQGKWFHGCL-----VKSGIELSSCLVTSLLDMYVKCGDISNARRVF-NEHSH 305
Query: 387 PNGVVWGALLGGCRLHKNIKLAEEAMRHLS--ELDPLNDGYYVVMSNVYAEAGKWEEVSR 444
+ V+W A++ G + ++ A + + E+ P V +++V + G E +
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP----NCVTIASVLSGCGLIENL-E 360
Query: 445 IRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM--------WEKLLVKM 496
+ RS+ +K +++ + +VH + A + AK +FEM W ++
Sbjct: 361 LGRSVHGLSIKVGIWDTNVA-NALVHMY-AKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 497 KMKGYIPDTSVVLLDMEDEQ 516
G I + + M E
Sbjct: 419 SQNGSIHEALFLFHRMNSES 438
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 212 EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
E +GS + + ++ +++ + H GNG + ++ + L+ +Y G
Sbjct: 33 ENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYT 92
Query: 272 EEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHAC 331
++ VFD + E W M+ + ++ +++ G + + + F L AC
Sbjct: 93 KDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKAC 152
Query: 332 SHVGLVDKGREFFTIMRRDYGIVPGVEH--YGCLVDLLSRAGRLEEAREVIANMSVPPNG 389
+ + +D G++ + + VP ++ L+D+ ++ G ++ A +V ++++ N
Sbjct: 153 TELQDLDNGKKIHCQLVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITL-RNV 207
Query: 390 VVWGALLGG 398
V W +++ G
Sbjct: 208 VCWTSMIAG 216
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 213/414 (51%), Gaps = 34/414 (8%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W +K + + + LF +R + D T L+KAC G+ +H
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 114 VQKLGF--QSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+ F QS+ LQ ++ +Y C RL+ +
Sbjct: 236 SIRRSFIDQSDY-LQASIIDMYVKC------RLLDN------------------------ 264
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
AR LF++ RNV WT++ISG AKC + EA +F +M RE PN+ T+ A+LV+C+
Sbjct: 265 -ARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS 323
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
LG L GKS+H + NG + + IDMY +CG ++ VFD M ER V+SWSS
Sbjct: 324 SLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSS 383
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI F ++ M + PN VTF+ +L ACSH G V +G + F M RDY
Sbjct: 384 MINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDY 443
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G+VP EHY C+VDLL RAG + EA+ I NM V P WGALL CR+HK + LA E
Sbjct: 444 GVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEI 503
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
L ++P YV++SN+YA+AG WE V+ +RR M +G +K G S+ +
Sbjct: 504 AEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 162/370 (43%), Gaps = 39/370 (10%)
Query: 56 WNSCLKFFAERGAPC--DTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
WN+ L +++ C D + L+ R+R+ D F F +KAC + G +IH
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
K G + + L+ +YA G A+ +FD++P ++ W ++
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVL------------- 181
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
+ G K E R+F M G + +T++ ++ AC +
Sbjct: 182 ------------------MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNV 223
Query: 234 GDLEFGKSIHRFAEGNGFL-RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ GK +H + F+ ++ Y+ ++IDMYVKC L+ ++F+ +R VV W+++
Sbjct: 224 FAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTL 283
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I GFA M+R + PN T +L +CS +G + G+ M R+ G
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-G 342
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
I ++ +D+ +R G ++ AR V +M N + W +++ ++ L EEA+
Sbjct: 343 IEMDAVNFTSFIDMYARCGNIQMARTVF-DMMPERNVISWSSMINAFGIN---GLFEEAL 398
Query: 413 RHLSELDPLN 422
++ N
Sbjct: 399 DCFHKMKSQN 408
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 34/292 (11%)
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+HA V GF+ ++L + L + Y A F+++P W
Sbjct: 26 VHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP-----CW------------ 68
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAK---CGMSEEALRVFSEMEREGSRPNEVTVVAV 226
+RN SW +++SG +K C S+ L +++ M R + +V
Sbjct: 69 ------------KRNRHSWNTILSGYSKSKTCCYSD-VLLLYNRMRRHCDGVDSFNLVFA 115
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
+ AC LG LE G IH A NG ++ YV +L++MY + G +E +VFD + R
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
V W ++ G+ + M +G+ + +T I ++ AC +V G+ +
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 347 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
R I ++D+ + L+ AR++ SV N V+W L+ G
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISG 286
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 37/251 (14%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W + + FA+ + LF ++ + SILP+ T + +L +C+ + G+ +H
Sbjct: 277 VVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHG 336
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y+ + G + + + + +YA CG AR +FD MP+++V +W+ M
Sbjct: 337 YMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSM------------ 384
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
I+ G+ EEAL F +M+ + PN VT V++L AC+
Sbjct: 385 -------------------INAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSH 425
Query: 233 LGDLEFG-KSIHRFAEGNGFL--RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS- 288
G+++ G K G + Y C ++D+ + G + E D M + + S
Sbjct: 426 SGNVKEGWKQFESMTRDYGVVPEEEHYAC--MVDLLGRAGEIGEAKSFIDNMPVKPMASA 483
Query: 289 WSSMIVGFAMH 299
W +++ +H
Sbjct: 484 WGALLSACRIH 494
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 245/499 (49%), Gaps = 44/499 (8%)
Query: 1 MLCLCSTLPP--QIPKPTHLDHATSQNH---HLKQARALLIKTNAPLSHVDLAHVPAIVP 55
L LCS++ QI HL + + L + +L + + + L H P
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTP 78
Query: 56 --WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
WN + ++ +P ++I ++ +++ I P+ T FLLKAC + GR I
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
V K GF ++ + N L+HLY +C +TS AR
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDAR------------------------------ 168
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
+FD M RNV SW S+++ L + G F EM + P+E T+V +L AC
Sbjct: 169 -KVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG-- 225
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
G+L GK +H N + AL+DMY K G LE VF+ M ++ V +WS+MI
Sbjct: 226 GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMI 285
Query: 294 VGFAMHXXXXXXXXXXXXMIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
VG A + M++ S ++PN+VTF+GVL ACSH GLVD G ++F M + +
Sbjct: 286 VGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHK 345
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK---LAE 409
I P + HYG +VD+L RAGRL EA + I M P+ VVW LL C +H + + E
Sbjct: 346 IKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGE 405
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
+ + L EL+P G V+++N +AEA W E + +RR MK +KK G S + + G
Sbjct: 406 KVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSF 465
Query: 470 HEFVAGDETHPQAKGIFEM 488
H F +G + + I+E+
Sbjct: 466 HRFFSGYDPRSEYVSIYEL 484
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 215/394 (54%), Gaps = 33/394 (8%)
Query: 87 DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMF 146
D + S +++C ++ D TG H K GF S++ L + L+ LY GE
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE-------- 170
Query: 147 DKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALR 206
V A +F+ MP RNV SWT++ISG A+ + L+
Sbjct: 171 -----------------------VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK 207
Query: 207 VFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYV 266
++S+M + S PN+ T A+L AC G L G+S+H G +++ N+LI MY
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 267 KCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI-RSGMKPNHVTFI 325
KCG L++ R+FD + VVSW+SMI G+A H M+ +SG KP+ +T++
Sbjct: 268 KCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYL 327
Query: 326 GVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 385
GVL +C H GLV +GR+FF +M ++G+ P + HY CLVDLL R G L+EA E+I NM +
Sbjct: 328 GVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Query: 386 PPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRI 445
PN V+WG+LL CR+H ++ A L+P +V ++N+YA G W+E + +
Sbjct: 387 KPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATV 446
Query: 446 RRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETH 479
R+ MK +G+K PGCS I I+ V F A D ++
Sbjct: 447 RKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSN 480
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 33/249 (13%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W + + FA+ + L+ ++R+ + P+ +T + LL ACT S + GR +H
Sbjct: 186 VVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHC 245
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+G +S L + N L+ +Y CG+ A +FD+ +DV +WN
Sbjct: 246 QTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWN-------------- 291
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFS-EMEREGSRPNEVTVVAVLVACA 231
S+I+G A+ G++ +A+ +F M + G++P+ +T + VL +C
Sbjct: 292 -----------------SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCR 334
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER-TVVSWS 290
G ++ G+ +G + + L+D+ + G L+E + + M + V W
Sbjct: 335 HAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWG 394
Query: 291 SMIVGFAMH 299
S++ +H
Sbjct: 395 SLLFSCRVH 403
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 14/301 (4%)
Query: 209 SEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC 268
S ++R+G + + + + +C D G H A GF+ +VY+ ++L+ +Y
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 269 GCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVL 328
G +E +VF+ M ER VVSW++MI GFA M +S PN TF +L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 329 HACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 388
AC+ G + +GR G+ + L+ + + G L++A + S +
Sbjct: 229 SACTGSGALGQGRSVHC-QTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKD 286
Query: 389 GVVWGALLGGCRLH----KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSR 444
V W +++ G H + I+L E M S P Y V+S+ AG +E +
Sbjct: 287 VVSWNSMIAGYAQHGLAMQAIELFELMMPK-SGTKPDAITYLGVLSSC-RHAGLVKEGRK 344
Query: 445 IRRSMKSRGVKKTPGCSSITID-----GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK 499
M G+K S +D G++ E + E P +W LL ++
Sbjct: 345 FFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV-IWGSLLFSCRVH 403
Query: 500 G 500
G
Sbjct: 404 G 404
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 239/478 (50%), Gaps = 70/478 (14%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
+N+ L +A P TI + PD FT + KAC S I G+ IH V
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K+GF ++ +QN L+H Y CGE+ +A +F +MP +DV +W +I G A D
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 176 LFDSMP-RRNVRSWTSV---------------ISGL--------------------AKCG 199
F M N+ ++ V I GL KC
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253
Query: 200 MSEEALRVFSEMERE--------------------------------GSRPNEVTVVAVL 227
+A+RVF E+E++ G +P+ + +VL
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
ACA LG ++ G+ +H + G + ++ A++DMY KCG +E +F+G+R + V
Sbjct: 314 SACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVF 373
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
+W++++ G A+H M++ G KPN VTF+ L+AC H GLVD+GR +F M
Sbjct: 374 TWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKM 433
Query: 348 R-RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI- 405
+ R+Y + P +EHYGC++DLL RAG L+EA E++ M V P+ + GA+L C+ +
Sbjct: 434 KSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLM 493
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
+L +E + +++ + G YV++SN++A +W++V+RIRR MK +G+ K PG S I
Sbjct: 494 ELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 11/279 (3%)
Query: 126 QNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNV 185
+++LL L + C + + ++ +D+ +++I +++ A + S+ ++
Sbjct: 6 KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65
Query: 186 RS------WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFG 239
RS + +++S A C + + G P+ T V AC + + G
Sbjct: 66 RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 240 KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMH 299
K IH GF ++YV N+L+ Y CG C+VF M R VVSW+ +I GF
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 300 XXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEH 359
M ++PN T++ VL + VG + G+ ++ + ++ +E
Sbjct: 186 GLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS-LET 241
Query: 360 YGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
L+D+ + +L +A V + + V W +++ G
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSMISG 279
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 3/422 (0%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQK 116
N K + +P + + + + +PD +T L+ + + +G++ H K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 117 LGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDL 176
G L +QN L+H+Y CG A+ +F ++P++D+ +WN +I ++ GDV AA L
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDL 236
FD MP +N+ SW +IS ++ +F EM R G + NE T+V +L AC + L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 237 EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGF 296
+ G+S+H +V + ALIDMY KC + R+FD + R V+W+ MI+
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPG 356
+H MI ++P+ VTF+GVL C+ GLV +G+ ++++M ++ I P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
H C+ +L S AG EEA E + N+ V P W LL R N L E +
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 414 HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFV 473
L E DPLN YY ++ N+Y+ G+WE+V+R+R +K R + + PGC + + +VH
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLR 506
Query: 474 AG 475
G
Sbjct: 507 LG 508
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 35/193 (18%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
I+ WN + + P +ISLF + + + T LL AC S+ + GR +HA
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHA 274
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ + S++++ L+ +Y C E AR +FD + ++ TWN+MI
Sbjct: 275 SLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI----------- 323
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKC--GMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
LA C G E L +F M RP+EVT V VL C
Sbjct: 324 ----------------------LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGC 361
Query: 231 AQLGDLEFGKSIH 243
A+ G + G+S +
Sbjct: 362 ARAGLVSQGQSYY 374
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 236/446 (52%), Gaps = 30/446 (6%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ WNS + F++ LF+++++ + D +T + LL AC+ + G+ +H
Sbjct: 270 LISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHG 329
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V K G + N L+ +Y + P G +
Sbjct: 330 MVIKKGLEQVTSATNALISMYI-------------QFP----------------TGTMED 360
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A LF+S+ +++ SW S+I+G A+ G+SE+A++ FS + + ++ A+L +C+
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 420
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER-TVVSWSS 291
L L+ G+ IH A +GF+ N +V ++LI MY KCG +E + F + + + V+W++
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI+G+A H M +K +HVTF +L ACSH GL+ +G E +M Y
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVY 540
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
I P +EHY VDLL RAG + +A+E+I +M + P+ +V LG CR I++A +
Sbjct: 541 KIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQV 600
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
HL E++P + YV +S++Y++ KWEE + +++ MK RGVKK PG S I I V
Sbjct: 601 ANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKA 660
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMK 497
F A D ++P + I+ M + L +M+
Sbjct: 661 FNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 46/323 (14%)
Query: 82 LSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSH 141
L++L D C+ L + +HA V KLG Q + + N ++ YA CG S
Sbjct: 210 LTLLDDPMFCNLL-------------KQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 142 ARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMS 201
A+ +FD + G ++DL SW S+I+G +K +
Sbjct: 257 AKRVFDGL---------------------GGSKDLI---------SWNSMIAGFSKHELK 286
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
E A +F +M+R + T +L AC+ FGKS+H G + NAL
Sbjct: 287 ESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNAL 346
Query: 262 IDMYVK--CGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
I MY++ G +E+ +F+ ++ + ++SW+S+I GFA + S +K
Sbjct: 347 ISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKV 406
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
+ F +L +CS + + G++ + + G V L+ + S+ G +E AR+
Sbjct: 407 DDYAFSALLRSCSDLATLQLGQQIHALATKS-GFVSNEFVISSLIVMYSKCGIIESARKC 465
Query: 380 IANMSVPPNGVVWGALLGGCRLH 402
+S + V W A++ G H
Sbjct: 466 FQQISSKHSTVAWNAMILGYAQH 488
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 31/303 (10%)
Query: 129 LLHLYA-SCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRS 187
L H YA CG S D+ N ++ I G +G A LFD MP+R+ S
Sbjct: 21 LTHCYAIKCGSIS------------DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVS 68
Query: 188 WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAE 247
W ++ISG CG E+A +F+ M+R GS + + +L A + + G+ +H
Sbjct: 69 WNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI 128
Query: 248 GNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXX 307
G+ NVYV ++L+DMY KC +E+ F + E VSW+++I GF
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW 188
Query: 308 XXXXM-IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIV--PGVEHY---- 360
M +++ + + TF +L L+D F ++++ + V G++H
Sbjct: 189 LLGLMEMKAAVTMDAGTFAPLL------TLLDDPM-FCNLLKQVHAKVLKLGLQHEITIC 241
Query: 361 GCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK----NIKLAEEAMRHLS 416
++ + G + +A+ V + + + W +++ G H+ +L + RH
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 417 ELD 419
E D
Sbjct: 302 ETD 304
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 151/394 (38%), Gaps = 99/394 (25%)
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
+ H Y K G S++ + N +L Y G +A ++FD+MP++D +WN MI S G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 169 DVGAARDLFDSMPRR---------------------------------------NVRSWT 189
+ A LF M R NV +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFG---------- 239
S++ AKC E+A F E+ S PN V+ A++ Q+ D++
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEI----SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 240 --------------------------KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
K +H G + +CNA+I Y CG + +
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 274 GCRVFDGM-RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
RVFDG+ + ++SW+SMI GF+ H M R ++ + T+ G+L ACS
Sbjct: 257 AKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Query: 333 HVGLVDKGREFFTIMRRDYGIV--PGVEHYGCLVDLLSR------AGRLEEAREVIANMS 384
G E + +G+V G+E + L G +E+A + ++
Sbjct: 317 -------GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK 369
Query: 385 VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
+ + W +++ G L+E+A++ S L
Sbjct: 370 -SKDLISWNSIITG---FAQKGLSEDAVKFFSYL 399
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 219/427 (51%), Gaps = 31/427 (7%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+ W++ + +++ G + + LF R+ I P +T +L AC+ + G+ +H++
Sbjct: 288 ITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSF 347
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ KLGF+ +L L+ +YA AG + A
Sbjct: 348 LLKLGFERHLFATTALVDMYAK-------------------------------AGCLADA 376
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
R FD + R+V WTS+ISG + +EEAL ++ M+ G PN+ T+ +VL AC+ L
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
LE GK +H +GF V + +AL MY KCG LE+G VF + VVSW++MI
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMI 496
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
G + + M+ GM+P+ VTF+ ++ ACSH G V++G +F +M G+
Sbjct: 497 SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGL 556
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
P V+HY C+VDLLSRAG+L+EA+E I + ++ +W LL C+ H +L A
Sbjct: 557 DPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGE 616
Query: 414 HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFV 473
L L YV +S +Y G+ +V R+ + M++ GV K GCS I + H FV
Sbjct: 617 KLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFV 676
Query: 474 AGDETHP 480
GD HP
Sbjct: 677 VGDTMHP 683
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 165/351 (47%), Gaps = 38/351 (10%)
Query: 53 IVPWNSCLKFFAERGAPCDT---ISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+V WNS + +++ G + + LF +R ILP+ +T + + KA + GR
Sbjct: 80 VVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQ 139
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
HA V K+ ++ + L+ +Y AG
Sbjct: 140 AHALVVKMSSFGDIYVDTSLVGMYCK-------------------------------AGL 168
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM--EREGSRPNEVTVVAVL 227
V +F MP RN +W++++SG A G EEA++VF+ E+E ++ AVL
Sbjct: 169 VEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVL 228
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
+ A + G+ IH NG L V + NAL+ MY KC L E C++FD +R +
Sbjct: 229 SSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
+WS+M+ G++ + M +G+KP+ T +GVL+ACS + +++G++ + +
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL 348
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ G + LVD+ ++AG L +AR+ + + +W +L+ G
Sbjct: 349 LK-LGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISG 397
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 170/360 (47%), Gaps = 45/360 (12%)
Query: 47 LAHVPA--IVPWNSCLKFFAERGAPCDTI---SLFLRLRQLSILPDH-FTCSFLLKACTI 100
A++P W++ + +A RG + I +LFLR ++ D+ FT A TI
Sbjct: 176 FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATI 235
Query: 101 SSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIM 160
+ GR IH K G + L N L+ +Y+ C + A MFD
Sbjct: 236 YVGL--GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFD------------- 280
Query: 161 IGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNE 220
S+GD RN +W+++++G ++ G S EA+++FS M G +P+E
Sbjct: 281 -----SSGD-------------RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 221 VTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG 280
T+V VL AC+ + LE GK +H F GF R+++ AL+DMY K GCL + + FD
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC 382
Query: 281 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKG 340
++ER V W+S+I G+ + M +G+ PN T VL ACS + ++ G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 341 REFFT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGG 398
++ ++ +G+ + L + S+ G LE+ V P VV W A++ G
Sbjct: 443 KQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRR--TPNKDVVSWNAMISG 498
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 218 PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRV 277
P+ T++ L +Q +L G+++H G + N L++ Y KCG L + +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 278 FDGMRERTVVSWSSMIVGFAMH---XXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHV 334
F+ + + VVSW+S+I G++ + M + PN T G+ A S +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 335 GLVDKGREFFTIMRRDYGIVPGVEHYG------CLVDLLSRAGRLEEAREVIANMSVPPN 388
+ T+ R+ + +V + +G LV + +AG +E+ +V A M N
Sbjct: 132 -------QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERN 183
Query: 389 GVVWGALLGGC----RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYA 434
W ++ G R+ + IK+ +R E + + V+S++ A
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 246/490 (50%), Gaps = 5/490 (1%)
Query: 12 IPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCD 71
I + ++L TS + L A T+A L I+ WN+ L FA+
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQ 415
Query: 72 TISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGF---QSNLILQNM 128
++L L +I D T LLK C I + +H Y K G + L N
Sbjct: 416 FLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNA 475
Query: 129 LLHLYASCGETSHARLMFDKMPQQ-DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRS 187
LL YA CG +A +F + ++ + ++N ++ +++G A+ LF M ++ +
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT 535
Query: 188 WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAE 247
W+ ++ A+ EA+ VF E++ G RPN VT++ +L CAQL L + H +
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYII 595
Query: 248 GNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXX 307
G L ++ + L+D+Y KCG L+ VF R +V +++M+ G+A+H
Sbjct: 596 RGG-LGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALM 654
Query: 308 XXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLL 367
M S +KP+HV +L AC H GL+ G + + +R +G+ P +E Y C VDL+
Sbjct: 655 IYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLI 714
Query: 368 SRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYV 427
+R GRL++A + M V PN +WG LL C + + L HL + + + G +V
Sbjct: 715 ARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHV 774
Query: 428 VMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 487
++SN+YA KWE V +R MK + +KK GCS + +DG + FV+GD +HP+ IF+
Sbjct: 775 LISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFD 834
Query: 488 MWEKLLVKMK 497
+ L ++MK
Sbjct: 835 LVNALYLQMK 844
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 149/347 (42%), Gaps = 51/347 (14%)
Query: 87 DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMF 146
DH ++KAC SD+ +GR +H V KLG + + +L++YA C + MF
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 147 DKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLA-KCGMSEEAL 205
+M D WNI V++GL+ CG E +
Sbjct: 80 RQMDSLDPVVWNI-------------------------------VLTGLSVSCG--RETM 106
Query: 206 RVFSEME-REGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
R F M + +P+ VT VL C +LGD GKS+H + G ++ V NAL+ M
Sbjct: 107 RFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSM 166
Query: 265 YVKCG-CLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVT 323
Y K G + FDG+ ++ VVSW+++I GF+ + M++ +PN+ T
Sbjct: 167 YAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYAT 226
Query: 324 FIGVLHACSHVGLVDK------GREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 377
VL C+ +DK GR+ + + + + V LV R GR+EEA
Sbjct: 227 IANVLPVCAS---MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAA 283
Query: 378 EVIANMSVPPNGVVWGALLGG----CRLHKNIKLAEEAMRHLSELDP 420
+ M + V W ++ G C K +L + H ++ P
Sbjct: 284 SLFTRMG-SKDLVSWNVVIAGYASNCEWFKAFQLFHN-LVHKGDVSP 328
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 182/416 (43%), Gaps = 52/416 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKAC-TISSDIV--TGRI 109
+V WN+ + F+E D F + + P++ T + +L C ++ +I +GR
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 110 IHAY-VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
IH+Y VQ+ Q+++ + N L+ Y G A +F +M +D+ +WN+
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV--------- 299
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVL 227
VI+G A +A ++F + +G P+ VT++++L
Sbjct: 300 ----------------------VIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 228 VACAQLGDLEFGKSIHRFAEGNGF-LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
CAQL DL GK IH + + + L + V NALI Y + G F M + +
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
+SW++++ FA ++ + + VT + +L C +V + K +E
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEV--- 454
Query: 347 MRRDYGIVPGVEHY-------GCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
Y + G+ H L+D ++ G +E A ++ +S V + +LL G
Sbjct: 455 --HGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG- 511
Query: 400 RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVK 455
+ N ++A +E+ + + +M +YAE+ E + R +++RG++
Sbjct: 512 --YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 194/487 (39%), Gaps = 83/487 (17%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+V WN + +A LF L + + PD T +L C +D+ +G+ IH
Sbjct: 294 LVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIH 353
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+Y+ + H+ L+ +D + N +I GD
Sbjct: 354 SYILR------------------------HSYLL------EDTSVGNALISFYARFGDTS 383
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
AA F M +++ SW +++ A + L + + E + VT++++L C
Sbjct: 384 AAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCI 443
Query: 232 QLGDLEFGKSIHRFAEGNGFLRN---VYVCNALIDMYVKCGCLEEGCRVFDGMRE-RTVV 287
+ + K +H ++ G L + + NAL+D Y KCG +E ++F G+ E RT+V
Sbjct: 444 NVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLV 503
Query: 288 SWSSMIVGFA-----------MHXXXXXXXXXXXXMIR--------------------SG 316
S++S++ G+ M+R G
Sbjct: 504 SYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARG 563
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 376
M+PN VT + +L C+ + + R+ + R G + + G L+D+ ++ G L+ A
Sbjct: 564 MRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR--GGLGDIRLKGTLLDVYAKCGSLKHA 621
Query: 377 REVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYV-VMSNVYAE 435
V + + V++ A++ G +H K A H++E + D ++ M
Sbjct: 622 YSVFQS-DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCH 680
Query: 436 AGKWEEVSRIRRSMKS-RGVKKTPGCSSITIDGV--------VHEFVAGDETHPQAKGIF 486
AG ++ +I S+++ G+K T + +D + + FV P A
Sbjct: 681 AGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNAN--- 737
Query: 487 EMWEKLL 493
+W LL
Sbjct: 738 -IWGTLL 743
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 237/513 (46%), Gaps = 72/513 (14%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WN+ + +AE + LF +RQ S+LPD FT S ++ C++ G+ +HA +
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF 400
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K QS +++ LL LY+ CG A L+F M ++D+ W +I L G A
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALK 460
Query: 176 LFDSMPRR-----------------------------------------NVRSWTSVISG 194
+F M NV +S+I
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDL 520
Query: 195 LAKCGMSEEALRVFSEMERE-------------------------------GSRPNEVTV 223
+KCG+ E AL+VF+ M E G P+ V++
Sbjct: 521 YSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSI 580
Query: 224 VAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE 283
+VLVA + L GKS+H + G + ++ NALIDMYVKCG + +F M+
Sbjct: 581 TSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH 640
Query: 284 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREF 343
+++++W+ MI G+ H M ++G P+ VTF+ ++ AC+H G V++G+
Sbjct: 641 KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNI 700
Query: 344 FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK 403
F M++DYGI P +EHY +VDLL RAG LEEA I M + + +W LL R H
Sbjct: 701 FEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHH 760
Query: 404 NIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
N++L + L ++P YV + N+Y EAG E +++ MK +G+ K PGCS I
Sbjct: 761 NVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820
Query: 464 TIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 496
+ + F +G + P IF + +L M
Sbjct: 821 EVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 151/363 (41%), Gaps = 36/363 (9%)
Query: 45 VDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDI 104
V++ +V WN + F G ++ L++ + S+ + + L AC+ S +
Sbjct: 229 VEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENS 288
Query: 105 VTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
GR IH V K+G ++ + LL +Y+ CG
Sbjct: 289 GFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM-------------------------- 322
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
VG A +F + + + W ++++ A+ AL +F M ++ P+ T+
Sbjct: 323 -----VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER 284
V+ C+ LG +GKS+H + +AL+ +Y KCGC + VF M E+
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMI--RSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
+V+W S+I G + M +KP+ V +AC+ + + G +
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
M + G+V V L+DL S+ G E A +V +MS N V W +++ C
Sbjct: 498 VHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST-ENMVAWNSMI-SCYSR 554
Query: 403 KNI 405
N+
Sbjct: 555 NNL 557
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 177/448 (39%), Gaps = 53/448 (11%)
Query: 89 FTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDK 148
FT LLKAC+ +++ G+ IH V LG++ + + L+++Y CG +A +FD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 149 MPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVF 208
Q + R+V W S+I G K +E + F
Sbjct: 121 WSQSQ------------------------SGVSARDVTVWNSMIDGYFKFRRFKEGVGCF 156
Query: 209 SEMEREGSRPNEVTVVAVLVACAQLGDL--EFGKSIHRFAEGNGFLRNVYVCNALIDMYV 266
M G RP+ ++ V+ + G+ E GK IH F N + ++ ALIDMY
Sbjct: 157 RRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYF 216
Query: 267 KCGCLEEGCRVFDGMRERT-VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFI 325
K G + RVF + +++ VV W+ MIVGF + +K +F
Sbjct: 217 KFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFT 276
Query: 326 GVLHACSHVGLVDKGREFF-TIMRRDYGIVPGVEHYGC--LVDLLSRAGRLEEAREVIAN 382
G L ACS GR+ +++ P Y C L+ + S+ G + EA E + +
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDP----YVCTSLLSMYSKCGMVGEA-ETVFS 331
Query: 383 MSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVY---AEAGKW 439
V +W A++ + A + + + L D + +SNV + G +
Sbjct: 332 CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSF--TLSNVISCCSVLGLY 389
Query: 440 EEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE--------MWEK 491
+ + R ++ T TI+ + + P A +F+ W
Sbjct: 390 NYGKSVHAELFKRPIQSTS-----TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGS 444
Query: 492 LLVKMKMKGYIPDTSVVLLDMEDEQKEI 519
L+ + G + V DM+D+ +
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSL 472
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV---AVLVACAQLGDLEFGKSIH 243
S S I L + G +AL ++S+ +GS P +V ++L AC+ L +L +GK+IH
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 244 RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE-------RTVVSWSSMIVGF 296
G+ + ++ +L++MYVKCG L+ +VFDG + R V W+SMI G+
Sbjct: 84 GSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV--DKGREFFTIMRRDYGIV 354
M+ G++P+ + V+ G ++G++ M R+ +
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLD 202
Query: 355 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
L+D+ + G +A V + N V+W ++ G
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 220/437 (50%), Gaps = 32/437 (7%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++V WNS +K + +G + + R+ P T + +L AC+ S +++ G+ IH
Sbjct: 273 SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIH 332
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
YV + +++ + L+ LY CGE + A +F K Q+DVA
Sbjct: 333 GYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVA---------------- 375
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
SW +IS G +A+ V+ +M G +P+ VT +VL AC+
Sbjct: 376 --------------ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
QL LE GK IH + + + +AL+DMY KCG +E R+F+ + ++ VVSW+
Sbjct: 422 QLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTV 481
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI + H M + G+KP+ VT + VL AC H GL+D+G +FF+ MR Y
Sbjct: 482 MISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 541
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANM-SVPPNGVVWGALLGGCRLHKNIKLAEE 410
GI P +EHY C++D+L RAGRL EA E+I N + L C LH L +
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDR 601
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
R L E P + Y+V+ N+YA W+ R+R MK G++K PGCS I + V
Sbjct: 602 IARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVC 661
Query: 471 EFVAGDETHPQAKGIFE 487
F A D +H +A+ ++E
Sbjct: 662 HFFAEDRSHLRAENVYE 678
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 154/328 (46%), Gaps = 35/328 (10%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSI-LPDHFTCSFLLKACTISSDIVTGRIIHAYV 114
WNS + +++ DT+ +F RL SI +PD FT ++KA GR+IH V
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 115 QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAAR 174
K G+ ++++ + L+ +YA +F+ Q
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFN-------LFENSLQ----------------------- 163
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
+FD MP R+V SW +VIS + G +E+AL +F ME G PN V++ + AC++L
Sbjct: 164 -VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
LE GK IHR GF + YV +AL+DMY KC CLE VF M +++V+W+SMI
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIV 354
G+ MI G +P+ T +L ACS + G+ + R +V
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR--SVV 340
Query: 355 PGVEHYGC-LVDLLSRAGRLEEAREVIA 381
+ C L+DL + G A V +
Sbjct: 341 NADIYVNCSLIDLYFKCGEANLAETVFS 368
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 160/370 (43%), Gaps = 38/370 (10%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ WN+ + F + G + LF R+ P+ + + + AC+ + G+ IH
Sbjct: 173 VASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHR 232
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
K GF+ + + + L+ +Y C AR +F KMP++ + WN MI ++ GD
Sbjct: 233 KCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD--- 289
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
S+ + + + M EG+RP++ T+ ++L+AC++
Sbjct: 290 ----------------------------SKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+L GK IH + + ++YV +LID+Y KCG VF ++ SW+ M
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I + M+ G+KP+ VTF VL ACS + ++KG++ +
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR- 440
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGGCRLHKNIKLAEEA 411
+ L+D+ S+ G +EA + S+P VV W ++ H + EA
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFN--SIPKKDVVSWTVMISAYGSHGQPR---EA 495
Query: 412 MRHLSELDPL 421
+ E+
Sbjct: 496 LYQFDEMQKF 505
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 40/310 (12%)
Query: 94 LLKACTISSDIVTG-RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ 152
LL+ CT S+ + +++H + LG + +++L L+++Y +C + AR +F+
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN---- 64
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME 212
FD R +V W S++SG +K M + L VF +
Sbjct: 65 ------------------------FD--IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLL 98
Query: 213 R-EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
P+ T V+ A LG G+ IH +G++ +V V ++L+ MY K
Sbjct: 99 NCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLF 158
Query: 272 EEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHAC 331
E +VFD M ER V SW+++I F M SG +PN V+ + AC
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 332 SHVGLVDKGREFFTIMRRDYGIVPGVEHY--GCLVDLLSRAGRLEEAREVIANMSVPPNG 389
S + +++G+E I R+ ++ Y LVD+ + LE AREV M P
Sbjct: 219 SRLLWLERGKE---IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM--PRKS 273
Query: 390 VV-WGALLGG 398
+V W +++ G
Sbjct: 274 LVAWNSMIKG 283
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 212/413 (51%), Gaps = 41/413 (9%)
Query: 55 PWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYV 114
WN+ LK + + I LF +++ L I D + + ++ +C+ ++ G+ +H YV
Sbjct: 400 AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYV 459
Query: 115 QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAAR 174
K + + N L+ LY G+ + A MF +
Sbjct: 460 VKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-------------------------- 493
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
NV +W ++I+ C SE+A+ +F M E +P+ +T+V +L+AC G
Sbjct: 494 ------ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTG 547
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
LE G+ IHR+ N+ + ALIDMY KCG LE+ +FD ++ V W+ MI
Sbjct: 548 SLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMIS 607
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIV 354
G+ MH M S +KP TF+ +L AC+H GLV++G++ F M + Y +
Sbjct: 608 GYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVK 666
Query: 355 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK----NIKLAEE 410
P ++HY CLVDLLSR+G LEEA + +M P+GV+WG LL C H I++AE
Sbjct: 667 PNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAER 726
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
A+ DP NDGYY++++N+Y+ AGKWEE R R M+ GV K G S +
Sbjct: 727 AVAS----DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 140/355 (39%), Gaps = 46/355 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
I WNS +K G ++ F + PDHFT ++ AC G +H
Sbjct: 90 IFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHG 149
Query: 113 YVQKLG-FQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
V K G F N + ++ Y+ CG A L+FD+M
Sbjct: 150 LVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEM---------------------- 187
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS---RPNEVTVVAVLV 228
P R+V +WT++ISG + G SE L +M GS +PN T+
Sbjct: 188 ---------PDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQ 238
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
AC+ LG L+ G+ +H FA NG + +V +++ Y K G E F + + + S
Sbjct: 239 ACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFS 298
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
W+S+I A M GM P+ V +++ + LV +G+ F +
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVI 358
Query: 349 R-----DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
R D + + C +LLS A +L +S N W +L G
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKL------FCRISEEGNKEAWNTMLKG 407
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 37/270 (13%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ WN+ + + I+LF R+ + P T LL AC + + G++IH
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y+ + + NL L L+ +YA CG +R +FD Q+D WN+MI GDV +
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVES 617
Query: 173 ARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPN--------- 219
A LFD M +V+ ++ +++S G+ E+ ++F +M + +PN
Sbjct: 618 AIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVD 677
Query: 220 -----------EVTVVA------------VLVACAQLGDLEFGKSIHRFAEGNGFLRNVY 256
E TV++ +L +C G+ E G + A + + Y
Sbjct: 678 LLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY 737
Query: 257 VCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
L +MY G EE R + MRE V
Sbjct: 738 YI-MLANMYSAAGKWEEAERAREMMRESGV 766
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 39/314 (12%)
Query: 86 PDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLM 145
P C F +AC+ + GR +H + K G S+ +Q+ + Y+ G S A L
Sbjct: 230 PRTLECGF--QACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS 287
Query: 146 FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL 205
F ++ +D+ SWTS+I+ LA+ G EE+
Sbjct: 288 FRELGDEDMF-------------------------------SWTSIIASLARSGDMEESF 316
Query: 206 RVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMY 265
+F EM+ +G P+ V + ++ ++ + GK+ H F + F + VCN+L+ MY
Sbjct: 317 DMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMY 376
Query: 266 VKCGCLEEGCRVFDGMRER-TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
K L ++F + E +W++M+ G+ + G++ + +
Sbjct: 377 CKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASA 436
Query: 325 IGVLHACSHVGLVDKGREFF-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 383
V+ +CSH+G V G+ +++ + V L+DL + G L A +
Sbjct: 437 TSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV--VNSLIDLYGKMGDLTVAWRMFCE- 493
Query: 384 SVPPNGVVWGALLG 397
N + W A++
Sbjct: 494 -ADTNVITWNAMIA 506
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 4/205 (1%)
Query: 141 HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGM 200
H L+ +++ + +I S G + +F + RR++ W S+I G
Sbjct: 46 HNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGD 105
Query: 201 SEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA-EGNGFLRNVYVCN 259
+L F M G P+ T V+ ACA+L G +H + GF RN V
Sbjct: 106 YARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGA 165
Query: 260 ALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM-- 317
+ + Y KCG L++ C VFD M +R VV+W+++I G + M +G
Sbjct: 166 SFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDV 225
Query: 318 -KPNHVTFIGVLHACSHVGLVDKGR 341
KPN T ACS++G + +GR
Sbjct: 226 DKPNPRTLECGFQACSNLGALKEGR 250
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 222/447 (49%), Gaps = 32/447 (7%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+++ WN + G + L R+R D LKAC++ I G+ IH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+ ++N L+ +Y+ C + HA ++F + + + TWN
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN------------- 350
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
S+ISG A+ SEEA + EM G +PN +T+ ++L CA
Sbjct: 351 ------------------SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCA 392
Query: 232 QLGDLEFGKSIHRFA-EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
++ +L+ GK H + F + N+L+D+Y K G + +V D M +R V+++
Sbjct: 393 RIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYT 452
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S+I G+ M RSG+KP+HVT + VL ACSH LV +G F M+ +
Sbjct: 453 SLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCE 512
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
YGI P ++H+ C+VDL RAG L +A+++I NM P+G W LL C +H N ++ +
Sbjct: 513 YGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKW 572
Query: 411 AMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
A L E+ P N GYYV+++N+YA AG W +++ +R M+ GVKK PGC+ I D
Sbjct: 573 AAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFS 632
Query: 471 EFVAGDETHPQAKGIFEMWEKLLVKMK 497
F GD + P+A + + + L MK
Sbjct: 633 LFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 173/354 (48%), Gaps = 15/354 (4%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+PWN + +A+ + I+ + R+ I PD FT +LKAC + D+ GR++H
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
++ ++S+L + N L+ +Y AR +FD+M ++D +WN +I S G A
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 174 RDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+LFD M V +W + G + G AL + S M + + V ++ L A
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
C+ +G + GK IH A + + V N LI MY KC L VF E ++ +W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF-TIMR 348
+S+I G+A M+ +G +PN +T +L C+ + + G+EF I+R
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 349 R----DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
R DY ++ + LVD+ +++G++ A++V MS + V + +L+ G
Sbjct: 410 RKCFKDYTML-----WNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDG 457
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 43/298 (14%)
Query: 60 LKFFAERGAPCDTISLF--LRLRQLSILPDHF---TCSFLLKACTISSDIVTGRIIHAYV 114
L A G D F LRL+ S + D + + LL AC + G +HA+
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 115 QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAAR 174
G + + +L L+ Y++ + A+ + +
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN-------------------------S 104
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
D+ +P W +I+ AK + EE + + M +G RP+ T +VL AC +
Sbjct: 105 DILHPLP------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETL 158
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
D+ FG+ +H E + + ++YVCNALI MY + + R+FD M ER VSW+++I
Sbjct: 159 DVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVIN 218
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFI----GVLHACSHV---GLVDKGREFFT 345
+A M SG++ + +T+ G L ++V GL+ + R F T
Sbjct: 219 CYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPT 276
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 226/423 (53%), Gaps = 7/423 (1%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVT---- 106
P + +N + + + G + + L R+ D +T S +LKA +
Sbjct: 98 PTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRS 157
Query: 107 -GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
R++HA + K + + +L L+ Y G+ AR +F+ M ++V MI +
Sbjct: 158 LCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYM 217
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCG-MSEEALRVFSEMEREGSRPNEVTVV 224
+ G V A ++F++ +++ + +++ G ++ G ++ ++ ++ M+R G PN T
Sbjct: 218 NQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFA 277
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER 284
+V+ AC+ L E G+ +H +G ++ + ++L+DMY KCG + + RVFD M+E+
Sbjct: 278 SVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK 337
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
V SW+SMI G+ + M ++PN+VTF+G L ACSH GLVDKG E F
Sbjct: 338 NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIF 397
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKN 404
M+RDY + P +EHY C+VDL+ RAG L +A E M P+ +W ALL C LH N
Sbjct: 398 ESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGN 457
Query: 405 IKLAEEAMRHLSELDP-LNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
++LA A L +L+ G Y+ +SNVYA KW+ VS+IR MK R + KT G S
Sbjct: 458 VELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWT 517
Query: 464 TID 466
+ D
Sbjct: 518 SED 520
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 145/322 (45%), Gaps = 16/322 (4%)
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
G+ IHA + K GFQ +L + LL L+ CG S+AR +FD++P+ ++ +N MI +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVF---------SEMEREGSR 217
G V L M ++ +S + K S + + + + +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 218 PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRV 277
++V + A++ + G LE +++ + NV C ++I Y+ G +E+ +
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKD----ENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 278 FDGMRERTVVSWSSMIVGFAMH-XXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGL 336
F+ + + +V +++M+ GF+ M R+G PN TF V+ ACS +
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 337 VDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
+ G++ + + G+ ++ L+D+ ++ G + +AR V M N W +++
Sbjct: 289 HEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-EKNVFSWTSMI 346
Query: 397 GGCRLHKNIKLAEEAMRHLSEL 418
G + N + A E + E
Sbjct: 347 DGYGKNGNPEEALELFTRMKEF 368
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 230/447 (51%), Gaps = 45/447 (10%)
Query: 57 NSCLKFFAERGAPCDTISLFL-RLRQLSILPDHFTCSFLLKACTIS-SDIVTGRIIHAYV 114
N LK + E G P + F R RQ D F+ F +K + + + GR IHA V
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 115 QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAAR 174
+KLGF + + +Q L+ Y+S G DV AR
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVG-------------------------------DVDYAR 120
Query: 175 DLFDSMP-RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
+FD P ++N+ WT++IS + S EA+ +F ME E + V V L ACA L
Sbjct: 121 QVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADL 180
Query: 234 GDLEFGKSIHR--FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
G ++ G+ I+ ++ + N+L++MYVK G E+ ++FD + V +++S
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTS 240
Query: 292 MIVGFAMHXXXXXXXXXXXXMIR------SGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
MI G+A++ M + + PN VTFIGVL ACSH GLV++G+ F
Sbjct: 241 MIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFK 300
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
M DY + P H+GC+VDL R+G L++A E I M + PN V+W LLG C LH N+
Sbjct: 301 SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNV 360
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
+L EE R + ELD + G YV +SN+YA G W+E S++R ++ R + PG S I +
Sbjct: 361 ELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKR---RMPGKSWIEL 417
Query: 466 DGVVHEFVAGDETHPQAKGIFEMWEKL 492
+++EFV+G + + + + E+ E L
Sbjct: 418 GSIINEFVSGPDNNDEQLMMGEISEVL 444
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 45/259 (17%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
IV W + + + E + I LF R+ I D + L AC + G I++
Sbjct: 132 IVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYS 191
Query: 113 YV--QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
+K +L L+N LL++Y GET AR +FD+ ++DV T
Sbjct: 192 RSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTT-------------- 237
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER-EGSR-----PNEVTVV 224
+TS+I G A G ++E+L +F +M+ + S+ PN+VT +
Sbjct: 238 -----------------YTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFI 280
Query: 225 AVLVACAQLGDLEFGKSIHR--FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM- 281
VL+AC+ G +E GK + + N R + ++D++ + G L++ + M
Sbjct: 281 GVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF-GCMVDLFCRSGHLKDAHEFINQMP 339
Query: 282 -RERTVVSWSSMIVGFAMH 299
+ TV+ W +++ ++H
Sbjct: 340 IKPNTVI-WRTLLGACSLH 357
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 243/491 (49%), Gaps = 52/491 (10%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN + + ++G D I + +R + D T + L+ A + ++ G+ +
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD------------------- 153
Y + F+S+++L + ++ +YA CG A+ +FD ++D
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGE 459
Query: 154 ----------------VATWNIMIGHLISAGDVGAARDLFDSMPRR----NVRSWTSVIS 193
V TWN++I L+ G V A+D+F M N+ SWT++++
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 194 GLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLR 253
G+ + G SEEA+ +M+ G RPN ++ L ACA L L G++IH + +R
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY-----IIR 574
Query: 254 N------VYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXX 307
N V + +L+DMY KCG + + +VF + ++MI +A++
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIA 634
Query: 308 XXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLL 367
+ G+KP+++T VL AC+H G +++ E FT + + P +EHYG +VDLL
Sbjct: 635 LYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLL 694
Query: 368 SRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYV 427
+ AG E+A +I M P+ + +L+ C + +L + R L E +P N G YV
Sbjct: 695 ASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYV 754
Query: 428 VMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGV--VHEFVAGDETHPQAKGI 485
+SN YA G W+EV ++R MK++G+KK PGCS I I G VH FVA D+TH + I
Sbjct: 755 TISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Query: 486 FEMWEKLLVKM 496
M LL M
Sbjct: 815 QMMLALLLYDM 825
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 36/338 (10%)
Query: 76 FLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYAS 135
F+ + + I PD+F + KAC GR +H YV K G + + + + L +Y
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 136 CGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGL 195
CG + D A +FD +P RN +W +++ G
Sbjct: 221 CG-------VLDD------------------------ASKVFDEIPDRNAVAWNALMVGY 249
Query: 196 AKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNV 255
+ G +EEA+R+FS+M ++G P VTV L A A +G +E GK H A NG +
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 256 YVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRS 315
+ +L++ Y K G +E VFD M E+ VV+W+ +I G+ M
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 316 GMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 375
+K + VT ++ A + + G+E R + + ++D+ ++ G + +
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVD 428
Query: 376 AREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
A++V + +V + ++W LL + L+ EA+R
Sbjct: 429 AKKVF-DSTVEKDLILWNTLLAA---YAESGLSGEALR 462
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 158/363 (43%), Gaps = 47/363 (12%)
Query: 44 HVDLAHVPAIVPWNSCLKFFAERGAPCDTISLF--LRLRQLSILPDHFTCSFLLKACTIS 101
H + AH P+ + + + G + +SL + R L I P+ + +L+ C
Sbjct: 26 HDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIY--GEILQGCVYE 83
Query: 102 SDIVTGRIIHAYVQKLG--FQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNI 159
D+ TG+ IHA + K G + N ++ L+ YA C A ++F K+
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV-------- 135
Query: 160 MIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPN 219
RNV SW ++I + G+ E AL F EM P+
Sbjct: 136 -----------------------RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 172
Query: 220 EVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFD 279
V V AC L FG+ +H + +G V+V ++L DMY KCG L++ +VFD
Sbjct: 173 NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 232
Query: 280 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDK 339
+ +R V+W++++VG+ + M + G++P VT L A +++G V++
Sbjct: 233 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEE 292
Query: 340 GREFFTIMRRDYGIVPGVEHYG----CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGAL 395
G++ I IV G+E L++ + G +E A V M + V W +
Sbjct: 293 GKQSHAI-----AIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLI 346
Query: 396 LGG 398
+ G
Sbjct: 347 ISG 349
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 156/349 (44%), Gaps = 35/349 (10%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WN+ + + + G + I LF +R+ + P T S L A + G+ HA
Sbjct: 240 VAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAI 299
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
G + + IL LL+ Y G +A ++FD+M ++DV TWN+
Sbjct: 300 AIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNL-------------- 345
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
+ISG + G+ E+A+ + M E + + VT+ ++ A A+
Sbjct: 346 -----------------IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAART 388
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
+L+ GK + + + F ++ + + ++DMY KCG + + +VFD E+ ++ W++++
Sbjct: 389 ENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLL 448
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
+A M G+ PN +T+ ++ + G VD+ ++ F M+ GI
Sbjct: 449 AAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GI 507
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGGC 399
+P + + +++ + + G EEA + M + PN L C
Sbjct: 508 IPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 120/279 (43%), Gaps = 45/279 (16%)
Query: 8 LPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERG 67
+PP + + + +N + +A+ + ++ + +P ++ W + + + G
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS------GIIPNLISWTTMMNGMVQNG 525
Query: 68 APCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLI-LQ 126
+ I ++++ + P+ F+ + L AC + + GR IH Y+ + S+L+ ++
Sbjct: 526 CSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIE 585
Query: 127 NMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR 186
L+ +YA CG+ + A +F L+ +P N
Sbjct: 586 TSLVDMYAKCGDINKAEKVF--------------------------GSKLYSELPLSN-- 617
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA 246
++IS A G +EA+ ++ +E G +P+ +T+ VL AC GD+ ++I F
Sbjct: 618 ---AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDI--NQAIEIFT 672
Query: 247 EGNGFLRNVYVC----NALIDMYVKCGCLEEGCRVFDGM 281
+ R++ C ++D+ G E+ R+ + M
Sbjct: 673 DIVS-KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 11/236 (4%)
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHR-- 244
S+ +S L K G +EAL + +EM+ R +L C DL GK IH
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 245 FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXX 304
G+ + RN Y+ L+ Y KC LE +F +R R V SW+++I
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 305 XXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLV 364
M+ + + P++ V AC + GR + + G+ V L
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GLEDCVFVASSLA 215
Query: 365 DLLSRAGRLEEAREVIANMSVPP-NGVVWGALL-GGCRLHKNIKLAEEAMRHLSEL 418
D+ + G L++A +V +P N V W AL+ G + KN EEA+R S++
Sbjct: 216 DMYGKCGVLDDASKVFD--EIPDRNAVAWNALMVGYVQNGKN----EEAIRLFSDM 265
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 233/449 (51%), Gaps = 32/449 (7%)
Query: 49 HVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGR 108
H ++ W + + +A+ + + LF + + + D +L+A ++ ++ +
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
IH ++ + G +I QN L+ +Y C
Sbjct: 508 EIHCHILRKGLLDTVI-QNELVDVYGKCR------------------------------- 535
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
++G A +F+S+ ++V SWTS+IS A G EA+ +F M G + V ++ +L
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILS 595
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
A A L L G+ IH + GF + A++DMY CG L+ VFD + + ++
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQ 655
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
++SMI + MH M + P+H++F+ +L+ACSH GL+D+GR F IM
Sbjct: 656 YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIME 715
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
+Y + P EHY CLVD+L RA + EA E + M P VW ALL CR H ++
Sbjct: 716 HEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIG 775
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGV 468
E A + L EL+P N G V++SNV+AE G+W +V ++R MK+ G++K PGCS I +DG
Sbjct: 776 EIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGK 835
Query: 469 VHEFVAGDETHPQAKGIFEMWEKLLVKMK 497
VH+F A D++HP++K I+E ++ K++
Sbjct: 836 VHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 138/316 (43%), Gaps = 34/316 (10%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WN+ + + G P ++L+ +R + + LLKAC DI +G +H+ +
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ-DVATWNIMIGHLISAGDVGAAR 174
KLG+ S + N L+ +YA + S AR +FD ++ D WN
Sbjct: 210 KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN---------------- 253
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
S++S + G S E L +F EM G PN T+V+ L AC
Sbjct: 254 ---------------SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 235 DLEFGKSIH-RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
+ GK IH + + +YVCNALI MY +CG + + R+ M VV+W+S+I
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
G+ + MI +G K + V+ ++ A + + G E + + +G
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGW 417
Query: 354 VPGVEHYGCLVDLLSR 369
++ L+D+ S+
Sbjct: 418 DSNLQVGNTLIDMYSK 433
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 37/366 (10%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WNS L ++ G +T+ LF + P+ +T L AC S G+ IHA
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 114 VQKLGFQSN-LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V K S+ L + N L+ +Y CG KMPQ
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCG----------KMPQ--------------------- 338
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A + M +V +W S+I G + M +EAL FS+M G + +EV++ +++ A +
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L +L G +H + +G+ N+ V N LIDMY KC R F M ++ ++SW+++
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT-IMRRDY 351
I G+A + + + M+ + + +L A S + + +E I+R+
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK-- 516
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G++ V LVD+ + + A V ++ + V W +++ L+ N A E
Sbjct: 517 GLLDTVIQ-NELVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVEL 574
Query: 412 MRHLSE 417
R + E
Sbjct: 575 FRRMVE 580
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 145/322 (45%), Gaps = 38/322 (11%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WNS +K + + + + F + D + + ++ A S+++ G +HA
Sbjct: 351 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHA 410
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
YV K G+ SNL + N L+ +Y+ C T + F +M +D+
Sbjct: 411 YVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI----------------- 453
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
SWT+VI+G A+ EAL +F ++ ++ +E+ + ++L A +
Sbjct: 454 --------------SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L + K IH G L V + N L+D+Y KC + RVF+ ++ + VVSW+SM
Sbjct: 500 LKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSM 558
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I A++ M+ +G+ + V + +L A + + ++KGRE + R
Sbjct: 559 ISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGF 618
Query: 353 IVPG------VEHYGCLVDLLS 368
+ G V+ Y C DL S
Sbjct: 619 CLEGSIAVAVVDMYACCGDLQS 640
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 133/312 (42%), Gaps = 40/312 (12%)
Query: 92 SFLLKACTISSDIVTGRIIHAYVQKL--GFQSNLILQNMLLHLYASCGETSHARLMFDKM 149
+++L+ C + GR +H+ + K F+ + L L+ +Y CG A +FD+M
Sbjct: 84 AYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 150 PQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFS 209
P + WN MIG +S G+ +A L+ W + G+ G+S
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALY----------WNMRVEGVP-LGLS-------- 183
Query: 210 EMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCG 269
+ A+L ACA+L D+ G +H G+ ++ NAL+ MY K
Sbjct: 184 ------------SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 231
Query: 270 CLEEGCRVFDGMRER-TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVL 328
L R+FDG +E+ V W+S++ ++ M +G PN T + L
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 329 HACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGC--LVDLLSRAGRLEEAREVIANMSVP 386
AC G+E + + E Y C L+ + +R G++ +A ++ M+
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSS--THSSELYVCNALIAMYTRCGKMPQAERILRQMN-N 348
Query: 387 PNGVVWGALLGG 398
+ V W +L+ G
Sbjct: 349 ADVVTWNSLIKG 360
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 222/415 (53%), Gaps = 4/415 (0%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
IV W + + + + + + + + + P LL A S G +H
Sbjct: 270 IVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHG 329
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K GF LQ ++H YA + A F+ + +A+ N +I + G V
Sbjct: 330 TIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQ 389
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAVLVACA 231
AR++FD +++ SW ++ISG A+ + AL +F EM +P+ +T+V+V A +
Sbjct: 390 AREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAIS 449
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVF---DGMRERTVVS 288
LG LE GK H + + N + A+IDMY KCG +E +F + T+
Sbjct: 450 SLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP 509
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
W+++I G A H + +KPN +TF+GVL AC H GLV+ G+ +F M+
Sbjct: 510 WNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMK 569
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
D+GI P ++HYGC+VDLL +AGRLEEA+E+I M V + ++WG LL R H N+++A
Sbjct: 570 SDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIA 629
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
E A L+ +DP + G V++SNVYA+AG+WE+V+ +R M++R V+ + S +
Sbjct: 630 ELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 191/404 (47%), Gaps = 45/404 (11%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V + + +K +A+ + + LF +R L I+ + T + ++ AC+ I R++ +
Sbjct: 139 VSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSL 198
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
KL + + + LLH+Y C AR +FD+MP++++ TWN+M+ AG + A
Sbjct: 199 AIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQA 258
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
+LFD + +++ SW ++I G + +EAL ++EM R G +P+EV +V +L A A+
Sbjct: 259 EELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARS 318
Query: 234 GDLEFGKSIHRFAEGNGF---------LRNVYVC----------------------NALI 262
G +H GF + + Y NALI
Sbjct: 319 VGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALI 378
Query: 263 DMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG-MKPNH 321
+VK G +E+ VFD ++ + SW++MI G+A MI S +KP+
Sbjct: 379 AGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDA 438
Query: 322 VTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHY-GCLVDLLSRAGRLEEAREV- 379
+T + V A S +G +++G+ + ++ +P ++ ++D+ ++ G +E A +
Sbjct: 439 ITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPNDNLTAAIIDMYAKCGSIETALNIF 496
Query: 380 -----IANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
I++ ++ P W A++ G H + KLA + L L
Sbjct: 497 HQTKNISSSTISP----WNAIICGSATHGHAKLALDLYSDLQSL 536
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 32/289 (11%)
Query: 95 LKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDV 154
L +C S+D+ GR IH V K G SN + N +L++YA C + A +F + D
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 155 ATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMERE 214
A++NIM+ + + + A LFD MP R+ S+T++I G A+ EA+ +F EM
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 215 GSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA-----EGNGFL----------------- 252
G NEVT+ V+ AC+ LG + + + A EG F+
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 253 ---------RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXX 303
RN+ N +++ Y K G +E+ +FD + E+ +VSW +MI G
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLD 287
Query: 304 XXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF-TIMRRDY 351
M+R GMKP+ V + +L A + KG + TI++R +
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF 336
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 48/281 (17%)
Query: 183 RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSI 242
R+ R W VIS A+C + R + E S E +V+ L +CA D+ G+ I
Sbjct: 9 RSRRCW--VISLQARCFSAPS--RTHFDFSGESS-DTERALVSALGSCASSNDVTCGRQI 63
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEG---------------------------- 274
H +G N Y+CN++++MY KC L +
Sbjct: 64 HCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRL 123
Query: 275 ---CRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHAC 331
++FD M ER+ VS++++I G+A + M G+ N VT V+ AC
Sbjct: 124 WDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISAC 183
Query: 332 SHVGLVDKGR--EFFTIMRRDYG---IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP 386
SH+G + R + I + G + + H CL L ++AR++ M
Sbjct: 184 SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCL------KDARKLFDEMP-E 236
Query: 387 PNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYV 427
N V W +L G I+ AEE ++E D ++ G +
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 277
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 239/460 (51%), Gaps = 6/460 (1%)
Query: 2 LCLCSTLPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLK 61
L + S + QI +P DH+ S L A + N D ++ WNS +
Sbjct: 238 LRMASYMLEQIREPD--DHSLSA---LISGYANCGRVNESRGLFDRKSNRCVILWNSMIS 292
Query: 62 FFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQS 121
+ + + LF +R D T + ++ AC + TG+ +H + K G
Sbjct: 293 GYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLID 351
Query: 122 NLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMP 181
++++ + LL +Y+ CG A +F ++ D N MI S G + A+ +F+ +
Sbjct: 352 DIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIE 411
Query: 182 RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKS 241
+++ SW S+ +G ++ G + E L F +M + +EV++ +V+ ACA + LE G+
Sbjct: 412 NKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQ 471
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXX 301
+ A G + V ++LID+Y KCG +E G RVFD M + V W+SMI G+A +
Sbjct: 472 VFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQ 531
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
M +G++P +TF+ VL AC++ GLV++GR+ F M+ D+G VP EH+
Sbjct: 532 GFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFS 591
Query: 362 CLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL 421
C+VDLL+RAG +EEA ++ M +G +W ++L GC + + ++A + EL+P
Sbjct: 592 CMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPE 651
Query: 422 NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
N YV +S ++A +G WE + +R+ M+ V K PG S
Sbjct: 652 NSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 175/380 (46%), Gaps = 43/380 (11%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V NS L + G + + LF ++L+ D T + +LKAC + G+ IHA
Sbjct: 155 VVTLNSLLHGYILNGYAEEALRLF---KELNFSADAITLTTVLKACAELEALKCGKQIHA 211
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ G + + + + L+++YA CG+ A M +++ + D + + +I + G V
Sbjct: 212 QILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
+R LFD R V W S+ISG M EAL +F+EM E +R + T+ AV+ AC
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIG 330
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGC----------------- 275
LG LE GK +H A G + ++ V + L+DMY KCG E C
Sbjct: 331 LGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSM 390
Query: 276 --------------RVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
RVF+ + ++++SW+SM GF+ + M + + +
Sbjct: 391 IKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDE 450
Query: 322 VTFIGVLHACSHVGLVDKGREFF---TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 378
V+ V+ AC+ + ++ G + F TI+ D V L+DL + G +E R
Sbjct: 451 VSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS----SSLIDLYCKCGFVEHGRR 506
Query: 379 VIANMSVPPNGVVWGALLGG 398
V M V + V W +++ G
Sbjct: 507 VFDTM-VKSDEVPWNSMISG 525
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 153/346 (44%), Gaps = 68/346 (19%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNL-ILQNMLLHLYASCGETSHARLMFDKMPQQ 152
LL++C+ + R + + K GF S++ I+ N LL +Y+ G+ AR +FD+MP +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCG------------- 199
+ +WN MI +++G+ G + FD MP R+ SW V+SG AK G
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 200 ------------------MSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKS 241
+EEALR+F E+ + +T+ VL ACA+L L+ GK
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQ 208
Query: 242 IHRF---------AEGNGFLRNVYV----------------------CNALIDMYVKCGC 270
IH ++ N L NVY +ALI Y CG
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 271 LEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
+ E +FD R V+ W+SMI G+ + M R+ + + T V++A
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINA 327
Query: 331 CSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 376
C +G ++ G++ + +G++ + L+D+ S+ G EA
Sbjct: 328 CIGLGFLETGKQMHCHACK-FGLIDDIVVASTLLDMYSKCGSPMEA 372
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 214/418 (51%), Gaps = 39/418 (9%)
Query: 64 AERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNL 123
A G +++ F + + + D F LLKA D G++IH V K ++S+
Sbjct: 93 ARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDA 152
Query: 124 ILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMP-- 181
+ + L+ +Y+ GE +AR +F + +QD+ +N MI + A +L M
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 182 -------------------------------------RRNVRSWTSVISGLAKCGMSEEA 204
+ +V SWTS+ISGL +E+A
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA 272
Query: 205 LRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
F +M G PN T++ +L AC L ++ GK IH ++ G + +V +AL+DM
Sbjct: 273 FDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDM 332
Query: 265 YVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
Y KCG + E +F ++T V+++SMI +A H M +G K +H+TF
Sbjct: 333 YGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTF 392
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 384
+L ACSH GL D G+ F +M+ Y IVP +EHY C+VDLL RAG+L EA E+I M
Sbjct: 393 TAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR 452
Query: 385 VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEV 442
+ P+ VWGALL CR H N++LA A +HL+EL+P N G ++++++YA AG WE V
Sbjct: 453 MEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 184/425 (43%), Gaps = 56/425 (13%)
Query: 79 LRQLSILPDHF------TCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHL 132
+++L+I+P F + L++A GR++HA++ G + L+
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 133 YASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVI 192
Y CG+ AR +FD+MP++D++ +MIG
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIG------------------------------ 90
Query: 193 SGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFL 252
A+ G +E+L F EM ++G + + V ++L A L D EFGK IH +
Sbjct: 91 -ACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 253 RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 312
+ ++ ++LIDMY K G + +VF + E+ +V +++MI G+A + M
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 313 IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGR 372
G+KP+ +T+ ++ SH+ +K E +M D G P V + ++ L +
Sbjct: 210 KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQ 268
Query: 373 LEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYV-- 427
E+A + M + PN LL C +K +E + S + L D +V
Sbjct: 269 NEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKE-IHGYSVVTGLEDHGFVRS 327
Query: 428 VMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 487
+ ++Y + G E + R KTP +++T + ++ + H A E
Sbjct: 328 ALLDMYGKCGFISEAMILFR--------KTPKKTTVTFNSMIFCYA----NHGLADKAVE 375
Query: 488 MWEKL 492
+++++
Sbjct: 376 LFDQM 380
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 41/251 (16%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V W S + F ++ + P+ T LL ACT + + G+ I
Sbjct: 251 PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H Y G + + +++ LL +Y CG S A ++F K P++ T+N
Sbjct: 311 HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFN------------ 358
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
S+I A G++++A+ +F +ME G + + +T A+L AC
Sbjct: 359 -------------------SMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTAC 399
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNV-----YVCNALIDMYVKCGCLEEGCRVFDGMR-ER 284
+ G + G+++ + R V Y C ++D+ + G L E + MR E
Sbjct: 400 SHAGLTDLGQNLFLLMQNK--YRIVPRLEHYAC--MVDLLGRAGKLVEAYEMIKAMRMEP 455
Query: 285 TVVSWSSMIVG 295
+ W +++
Sbjct: 456 DLFVWGALLAA 466
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/363 (37%), Positives = 209/363 (57%), Gaps = 7/363 (1%)
Query: 127 NMLLHLYASCGETSHARLMFDKMPQ-QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNV 185
N++++ Y G+ A +F+++ D +W MI + AGDV A LF + ++
Sbjct: 372 NIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG 431
Query: 186 RSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIH-R 244
+WT +ISGL + + EA + S+M R G +P T +L + +L+ GK IH
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCV 491
Query: 245 FAEGNG-FLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXX 303
A+ + ++ + N+L+ MY KCG +E+ +F M ++ VSW+SMI+G + H
Sbjct: 492 IAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLAD 551
Query: 304 XXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCL 363
M+ SG KPN VTF+GVL ACSH GL+ +G E F M+ Y I PG++HY +
Sbjct: 552 KALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISM 611
Query: 364 VDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK----LAEEAMRHLSELD 419
+DLL RAG+L+EA E I+ + P+ V+GALLG C L+ K +AE A L ELD
Sbjct: 612 IDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELD 671
Query: 420 PLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETH 479
P+N +V + NVYA G+ + +R+ M +GVKKTPGCS + ++G + F++GD++
Sbjct: 672 PVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSA 731
Query: 480 PQA 482
+A
Sbjct: 732 SEA 734
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 184/442 (41%), Gaps = 95/442 (21%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W L + G D + LF +P+ S+ + +VTG I +
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELF------DEMPERNVVSW--------NTLVTGLIRNG 183
Query: 113 YVQKLG--FQS----NLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
++K F + +++ N ++ Y A+L+F M +++V TW M+
Sbjct: 184 DMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCR 243
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER--EGSRPNEVTVV 224
GDV A LF MP RN+ SWT++ISG A + EAL +F EM++ + PN T++
Sbjct: 244 YGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLI 303
Query: 225 AVLVACAQLGDLEF---GKSIHRFAEGNGF------------LRNVYV------------ 257
++ AC LG +EF G+ +H NG+ L ++Y
Sbjct: 304 SLAYACGGLG-VEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLL 362
Query: 258 --------CNALIDMYVKCGCLEEGCRVF----------------DG------------- 280
CN +I+ Y+K G LE +F DG
Sbjct: 363 NESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGL 422
Query: 281 ---MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
+ ++ V+W+ MI G + M+R G+KP + T+ +L + +
Sbjct: 423 FQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNL 482
Query: 338 DKGREFFTIMRRDYGIV-PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
D+G+ ++ + P + LV + ++ G +E+A E+ A M V + V W +++
Sbjct: 483 DQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMI 541
Query: 397 GGCRLHKNIKLAEEAMRHLSEL 418
G H LA++A+ E+
Sbjct: 542 MGLSHH---GLADKALNLFKEM 560
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 120 QSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDS 179
+ N++ N +L Y C + A +F +MP+ +V +W +M+ L G A +LFD
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDE 163
Query: 180 MPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFG 239
MP RNV SW ++++GL + G E+A +VF M + V+ A++ + +E
Sbjct: 164 MPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEA 219
Query: 240 KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMH 299
K + G+ +NV +++ Y + G + E R+F M ER +VSW++MI GFA +
Sbjct: 220 KLLF----GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWN 275
Query: 300 XXXXXXXXXXXXMIR--SGMKPNHVTFIGVLHACSHVGL 336
M + + PN T I + +AC +G+
Sbjct: 276 ELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W + + + SL + + + P + T S LL + +S++ G+ IH
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCV 491
Query: 114 VQKLG--FQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+ K + +LILQN L+ +YA CG A +F KM Q+D +WN
Sbjct: 492 IAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWN------------- 538
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
S+I GL+ G++++AL +F EM G +PN VT + VL AC+
Sbjct: 539 ------------------SMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS 580
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYV 266
G + G + + ++ Y ID Y+
Sbjct: 581 HSGLITRGLELFK------AMKETYSIQPGIDHYI 609
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 196/374 (52%), Gaps = 33/374 (8%)
Query: 93 FLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ 152
+L C D+ GR +H Y K GF +L +QN ++ YA G A F ++ +
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME 212
DV ++N S+I+G EE+ R+F EM
Sbjct: 373 DVISYN-------------------------------SLITGCVVNCRPEESFRLFHEMR 401
Query: 213 REGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLE 272
G RP+ T++ VL AC+ L L G S H + +G+ N +CNAL+DMY KCG L+
Sbjct: 402 TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLD 461
Query: 273 EGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
RVFD M +R +VSW++M+ GF +H M +G+ P+ VT + +L ACS
Sbjct: 462 VAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACS 521
Query: 333 HVGLVDKGREFFTIMRR-DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV 391
H GLVD+G++ F M R D+ ++P ++HY C+ DLL+RAG L+EA + + M P+ V
Sbjct: 522 HSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRV 581
Query: 392 WGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKS 451
G LL C +KN +L E + + L + V++SN Y+ A +WE+ +RIR K
Sbjct: 582 LGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKK 640
Query: 452 RGVKKTPGCSSITI 465
RG+ KTPG S + +
Sbjct: 641 RGLLKTPGYSWVDV 654
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 155/325 (47%), Gaps = 35/325 (10%)
Query: 94 LLKACTISSDIVTGRIIHAYVQK--LGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQ 151
LL+ C S ++V G++IH ++ K L S+ +L N L LYASC E AR +FD++P
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIPH 63
Query: 152 QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM 211
PR N +W +I A +E+AL ++ +M
Sbjct: 64 -----------------------------PRINPIAWDLMIRAYASNDFAEKALDLYYKM 94
Query: 212 EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
G RP + T VL ACA L ++ GK IH + F ++YVC AL+D Y KCG L
Sbjct: 95 LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGEL 154
Query: 272 EEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-SGMKPNHVTFIGVLHA 330
E +VFD M +R +V+W++MI GF++H M R G+ PN T +G+ A
Sbjct: 155 EMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPA 214
Query: 331 CSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGV 390
G + +G+ R G + ++D+ +++ + AR V ++ N V
Sbjct: 215 LGRAGALREGKAVHGYCTR-MGFSNDLVVKTGILDVYAKSKCIIYARRVF-DLDFKKNEV 272
Query: 391 VWGALLGGCRLHKNIKLAEEAMRHL 415
W A++GG ++ IK A E +
Sbjct: 273 TWSAMIGGYVENEMIKEAGEVFFQM 297
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 170/367 (46%), Gaps = 47/367 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRIIH 111
+V WN+ + F+ D I LFL +R++ L P+ T + A + + G+ +H
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
Y ++GF ++L+++ +L +YA +AR +FD
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD------------------------ 264
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM--EREGSRPNEVTVVAVLVA 229
D ++N +W+++I G + M +EA VF +M + V + +L+
Sbjct: 265 --LDF-----KKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMG 317
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
CA+ GDL G+ +H +A GF+ ++ V N +I Y K G L + R F + + V+S+
Sbjct: 318 CARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISY 377
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+S+I G ++ M SG++P+ T +GVL ACSH+ + G
Sbjct: 378 NSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC-----H 432
Query: 350 DYGIVPG--VEHYGC--LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
Y +V G V C L+D+ ++ G+L+ A+ V M + V W +L G +H
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGIH--- 488
Query: 406 KLAEEAM 412
L +EA+
Sbjct: 489 GLGKEAL 495
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 41/272 (15%)
Query: 35 LIKTNAPLSHVDLA-HV------PAIVP--WNSCLKFFAERGAPCDTISLFLRLRQLSIL 85
L + A + V+LA HV P I P W+ ++ +A + L+ ++ +
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR 100
Query: 86 PDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLM 145
P +T F+LKAC I G++IH++V F +++ + L+ YA CGE A +
Sbjct: 101 PTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKV 160
Query: 146 FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL 205
FD+MP++D+ WN M ISG + + +
Sbjct: 161 FDEMPKRDMVAWNAM-------------------------------ISGFSLHCCLTDVI 189
Query: 206 RVFSEMER-EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
+F +M R +G PN T+V + A + G L GK++H + GF ++ V ++D+
Sbjct: 190 GLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDV 249
Query: 265 YVKCGCLEEGCRVFDGMRERTVVSWSSMIVGF 296
Y K C+ RVFD ++ V+WS+MI G+
Sbjct: 250 YAKSKCIIYARRVFDLDFKKNEVTWSAMIGGY 281
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ +NS + P ++ LF +R I PD T +L AC+ + + G H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y G+ N + N L+ +Y CG+ A+ +FD M ++D+ +WN M
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTM------------ 481
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
LF G G+ +EAL +F+ M+ G P+EVT++A+L AC+
Sbjct: 482 ---LF----------------GFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSH 522
Query: 233 LGDLEFGKSIHRFAEGNGF--LRNVYVCNALIDMYVKCGCLEEG 274
G ++ GK + F + + N + D+ + G L+E
Sbjct: 523 SGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEA 566
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 254/512 (49%), Gaps = 71/512 (13%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
+NS + ++ P + + L+ ++ I PD T + +KAC + G +
Sbjct: 84 YNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV 143
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWN----------------- 158
G+++++ + + +L+LY CG+ A ++F KM ++DV W
Sbjct: 144 DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVE 203
Query: 159 ---------------IMIGHLISAGDVG-------------------------------- 171
+M+G L ++GD+G
Sbjct: 204 FYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYA 263
Query: 172 ------AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
A +F M + SW S+ISG A+ G++ +A EM+ G +P+ VT+V
Sbjct: 264 KVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVG 323
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
VLVAC+Q+G L+ G+ +H + L V AL+DMY KCG L +F+ + +
Sbjct: 324 VLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGRKD 382
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
+V W++MI + +H M S ++P+H TF +L A SH GLV++G+ +F+
Sbjct: 383 LVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFS 442
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
+M Y I P +HY CL+DLL+RAGR+EEA ++I + + +W ALL GC H+N+
Sbjct: 443 VMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNL 502
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
+ + A + +L+P + G ++SN +A A KW+EV+++R+ M++ ++K PG S+I +
Sbjct: 503 SVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEV 562
Query: 466 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMK 497
+G + F+ D +H + + ++ L +++
Sbjct: 563 NGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 14/277 (5%)
Query: 154 VATWNIMIGHLIS---------AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEA 204
++T N++ G IS G++ AR +FD +P+R V + S+I ++ +E
Sbjct: 41 ISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEV 100
Query: 205 LRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
LR++ +M E +P+ T + AC LE G+++ A G+ +V+VC++++++
Sbjct: 101 LRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNL 160
Query: 265 YVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
Y+KCG ++E +F M +R V+ W++M+ GFA M G + V
Sbjct: 161 YMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVM 220
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 384
+G+L A +G GR + R G+ V LVD+ ++ G +E A V + M
Sbjct: 221 LGLLQASGDLGDTKMGRSVHGYLYRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRM- 278
Query: 385 VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL 421
+ V WG+L+ G +N LA +A + E+ L
Sbjct: 279 MFKTAVSWGSLISG--FAQN-GLANKAFEAVVEMQSL 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W S + FA+ G + ++ L PD T +L AC+ + TGR++H Y
Sbjct: 284 VSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCY 343
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ K + L+ +Y+ CG S +R +F+ + ++D+ WN MI G+
Sbjct: 344 ILKRHVLDR-VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEV 402
Query: 174 RDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEM-EREGSRPNEVTVVAVLV 228
LF M N+ ++ S++S L+ G+ E+ FS M + +P+E V ++
Sbjct: 403 VSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLID 462
Query: 229 ACAQLGDLE 237
A+ G +E
Sbjct: 463 LLARAGRVE 471
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 129/371 (34%), Positives = 209/371 (56%), Gaps = 6/371 (1%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
++KA D+V+ R++ ++ + I N ++ Y A +F +MP +D
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD 342
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
+WN+M+ S G+V AR F+ P ++ SW S+I+ K +EA+ +F M
Sbjct: 343 AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI 402
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
EG +P+ T+ ++L A L +L G +H+ + +V V NALI MY +CG + E
Sbjct: 403 EGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIME 461
Query: 274 GCRVFDGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
R+FD M+ +R V++W++MI G+A H M +G+ P+H+TF+ VL+AC+
Sbjct: 462 SRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACA 521
Query: 333 HVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVW 392
H GLVD+ + F M Y I P +EHY LV++ S G+ EEA +I +M P+ VW
Sbjct: 522 HAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVW 581
Query: 393 GALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
GALL CR++ N+ LA A +S L+P + YV++ N+YA+ G W+E S++R +M+S+
Sbjct: 582 GALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESK 641
Query: 453 GVKKTPGCSSI 463
+KK G S +
Sbjct: 642 RIKKERGSSWV 652
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 150/375 (40%), Gaps = 63/375 (16%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V W++ + F + G + LF ++ P + L+K +S ++ Y
Sbjct: 168 VSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSE---AAWVLGQY 224
Query: 114 VQKLGFQSNLILQ-NMLLHLYASCGETSHARLMFDKMPQ---------------QDVATW 157
+ + +L+ N L+ Y G+ AR +FD++P ++V +W
Sbjct: 225 GSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 158 NIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR 217
N MI + GDV +AR LFD M R+ SW ++I G E+A +FSEM
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------ 338
Query: 218 PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRV 277
PN R+ + N ++ Y G +E
Sbjct: 339 PN---------------------------------RDAHSWNMMVSGYASVGNVELARHY 365
Query: 278 FDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
F+ E+ VSW+S+I + + M G KP+ T +L A + + +
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLG 397
G + I+ + ++P V + L+ + SR G + E+R + M + + W A++G
Sbjct: 426 RLGMQMHQIVVKT--VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG 483
Query: 398 GCRLHKNIKLAEEAM 412
G H N A EA+
Sbjct: 484 GYAFHGN---ASEAL 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 120 QSNLILQNMLLHLYASCGET---SHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDL 176
+ +++ N ++ Y SCG AR +FD+MP +D +WN MI +G A L
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRP----------NEVTVVAV 226
F+ MP RN SW+++I+G + G + A+ +F +M + S P NE A
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAA 218
Query: 227 LVACAQLGDLEFGKSIHRFAE-----GNG------------------------------F 251
V Q G L G+ +A G G F
Sbjct: 219 WV-LGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERF 277
Query: 252 LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGF 296
+NV N++I Y+K G + +FD M++R +SW++MI G+
Sbjct: 278 CKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGY 322
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 46/183 (25%)
Query: 117 LGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDL 176
LGF++ N L+ G + AR +F+K+ ++ TWN MI + ++ AR L
Sbjct: 38 LGFRAT----NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKL 93
Query: 177 FDSMPRRNVRSWTSVISGLAKCG---MSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
FD MP+R+V +W ++ISG CG EEA ++F EM P+
Sbjct: 94 FDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEM------PS-------------- 133
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
R+ + N +I Y K + E +F+ M ER VSWS+MI
Sbjct: 134 -------------------RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMI 174
Query: 294 VGF 296
GF
Sbjct: 175 TGF 177
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 230/456 (50%), Gaps = 34/456 (7%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++V N+ + +++ + + LF + + P T + +++AC + G H
Sbjct: 594 SVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 112 AYVQKLGFQSN-LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
+ K GF S L LL +Y + + A +F ++
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL--------------------- 691
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
S P+ ++ WT ++SG ++ G EEAL+ + EM +G P++ T V VL C
Sbjct: 692 --------SSPK-SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT-VVSW 289
+ L L G++IH + N LIDMY KCG ++ +VFD MR R+ VVSW
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSW 802
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+S+I G+A + M +S + P+ +TF+GVL ACSH G V GR+ F +M
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIG 862
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
YGI V+H C+VDLL R G L+EA + I ++ P+ +W +LLG CR+H + E
Sbjct: 863 QYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGE 922
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
+ L EL+P N YV++SN+YA G WE+ + +R+ M+ RGVKK PG S I ++
Sbjct: 923 ISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRT 982
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI-PD 504
H F AGD++H + I E L MK + PD
Sbjct: 983 HIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPD 1018
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 177/407 (43%), Gaps = 37/407 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ WNS L ++ G P + F+ L + I P+ FT S +L C +++ GR IH
Sbjct: 125 VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHC 184
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG---- 168
+ K+G + N L+ +YA C S AR +F+ + + W + + AG
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 169 ---------DVG----------------------AARDLFDSMPRRNVRSWTSVISGLAK 197
D G AR LF M +V +W +ISG K
Sbjct: 245 AVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGK 304
Query: 198 CGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYV 257
G A+ F M + + T+ +VL A + +L+ G +H A G N+YV
Sbjct: 305 RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYV 364
Query: 258 CNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM 317
++L+ MY KC +E +VF+ + E+ V W++MI G+A + M SG
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGY 424
Query: 318 KPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 377
+ TF +L C+ ++ G +F +I+ + + + LVD+ ++ G LE+AR
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDAR 483
Query: 378 EVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDG 424
++ M N V W ++G +N A + + ++ ++DG
Sbjct: 484 QIFERMCDRDN-VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 224/526 (42%), Gaps = 77/526 (14%)
Query: 14 KPTHLDHATSQNHH-----LKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGA 68
+P HL T N + LK AR L + ++P +V WN + +RG
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP----------DVVAWNVMISGHGKRGC 307
Query: 69 PCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNM 128
I F +R+ S+ T +L A I +++ G ++HA KLG SN+ + +
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 129 LLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSW 188
L+ +Y+ C +KM AA +F+++ +N W
Sbjct: 368 LVSMYSKC----------EKME---------------------AAAKVFEALEEKNDVFW 396
Query: 189 TSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEG 248
++I G A G S + + +F +M+ G ++ T ++L CA DLE G H
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 249 NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX 308
+N++V NAL+DMY KCG LE+ ++F+ M +R V+W+++I +
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLS 368
M G+ + L AC+HV + +G++ + + G+ + L+D+ S
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK-CGLDRDLHTGSSLIDMYS 575
Query: 369 RAGRLEEAREVIANMSVPPNGVV-WGALLGGC---RLHKNIKLAEEAMR----------- 413
+ G +++AR+V + S+P VV AL+ G L + + L +E +
Sbjct: 576 KCGIIKDARKVFS--SLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFA 633
Query: 414 ------HLSELDPLNDGYY-VVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGC---SSI 463
H E L ++ + ++ G++ +S + M SRG+ T C S +
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGM--TEACALFSEL 691
Query: 464 TIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 509
+ + + H Q G +E K +M+ G +PD + +
Sbjct: 692 SSPKSIVLWTGMMSGHSQ-NGFYEEALKFYKEMRHDGVLPDQATFV 736
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 151/411 (36%), Gaps = 74/411 (18%)
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
G+ +H+ LG S L N ++ LYA C + S+A FD +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL----------------- 121
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
++V +W S++S + G + LR F + PN+ T V
Sbjct: 122 ---------------EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIV 166
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
L CA+ ++EFG+ IH G RN Y AL+DMY KC + + RVF+ + +
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
V W+ + G+ M G +P+H+ F+ V++ +G + R F
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGE 286
Query: 347 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHK 403
M P V + ++ + G A E NM SV G++L +
Sbjct: 287 MSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 404 NIKLA--------------------------------EEAMRHLSELDPLNDGYYVVMSN 431
N+ L E A + L+ ND ++ M
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 432 VYAEAGKWEEVSRIRRSMKSRG--VKKTPGCSSITIDGVVHEFVAGDETHP 480
YA G+ +V + MKS G + S ++ H+ G + H
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 40/317 (12%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
+L+ +IV W + ++ G + + + +R +LPD T +L+ C++ S +
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ-DVATWNIMIGHL 164
GR IH+ + L + + N L+ +YA CG+ + +FD+M ++ +V +WN +I
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI--- 806
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
+G AK G +E+AL++F M + P+E+T +
Sbjct: 807 ----------------------------NGYAKNGYAEDALKIFDSMRQSHIMPDEITFL 838
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGN-GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE 283
VL AC+ G + G+ I G G V ++D+ + G L+E +
Sbjct: 839 GVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNL 898
Query: 284 RTVVS-WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP-NHVTFIGVLHACSHVGLVDKGR 341
+ WSS++ +H +I ++P N ++ + + + G +K
Sbjct: 899 KPDARLWSSLLGACRIHGDDIRGEISAEKLIE--LEPQNSSAYVLLSNIYASQGCWEKAN 956
Query: 342 EFFTIMRRDYGI--VPG 356
+M RD G+ VPG
Sbjct: 957 ALRKVM-RDRGVKKVPG 972
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 197/368 (53%), Gaps = 36/368 (9%)
Query: 107 GRIIHAYVQKLGF--QSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
GRI+H V+KLGF +S LI LLH YA G+ +AR +FD+MP++ TWN MIG
Sbjct: 130 GRIVHGMVKKLGFLYESELI-GTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
S D G N R + + CG G RP + T+V
Sbjct: 189 CSHKDKG----------NHNARKAMVLFRRFSCCG--------------SGVRPTDTTMV 224
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLR--NVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
VL A +Q G LE G +H + E GF +V++ AL+DMY KCGCL VF+ M+
Sbjct: 225 CVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMK 284
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
+ V +W+SM G A++ M SG+KPN +TF +L A H+GLV++G E
Sbjct: 285 VKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIE 344
Query: 343 FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
F M+ +G+ P +EHYGC+VDLL +AGR++EA + I M + P+ ++ +L C ++
Sbjct: 345 LFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIY 404
Query: 403 KNIKLAEEAMRHLSELDPLNDGY-------YVVMSNVYAEAGKWEEVSRIRRSMKSRGVK 455
+ EE + L E++ ++ YV +SNV A GKW EV ++R+ MK R +K
Sbjct: 405 GETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIK 464
Query: 456 KTPGCSSI 463
PG S +
Sbjct: 465 TRPGYSFV 472
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 143/331 (43%), Gaps = 25/331 (7%)
Query: 141 HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSM--PRRNVRSWTSVISGLAKC 198
HA+L+ + D + + +IGH S ++ L + PR + + L KC
Sbjct: 28 HAQLVINGC--HDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFG-HPDKFLFNTLLKC 84
Query: 199 GMSEEALRVFSEMEREGS--RPNEVTVVAVL---VACAQLGDLEFGKSIHRFAEGNGFL- 252
E+++R+F+ + S NE T V VL A L G+ +H + GFL
Sbjct: 85 SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLY 144
Query: 253 RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 312
+ + L+ Y K G L +VFD M ERT V+W++MI G+ H +
Sbjct: 145 ESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMV 204
Query: 313 I-------RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHY--GCL 363
+ SG++P T + VL A S GL++ G + + G P V+ + L
Sbjct: 205 LFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK-LGFTPEVDVFIGTAL 263
Query: 364 VDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSE--LDPL 421
VD+ S+ G L A V M V N W ++ G L+ + ++E + P
Sbjct: 264 VDMYSKCGCLNNAFSVFELMKV-KNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKP- 321
Query: 422 NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
N+ + + + Y G EE + +SMK+R
Sbjct: 322 NEITFTSLLSAYRHIGLVEEGIELFKSMKTR 352
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 247/510 (48%), Gaps = 98/510 (19%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA--- 112
W ++F ++ +T+ +++ + I P + +L+AC ++V G+ IHA
Sbjct: 72 WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQAL 131
Query: 113 --------YVQ--------KLGF------------QSNLILQNMLLHLYASCGETSHARL 144
YVQ +LG+ + N + N LLH Y GE AR
Sbjct: 132 KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARR 191
Query: 145 MFDKMPQQDVATWNIMIGHLISAGDVGAA------------------------------- 173
+FDK+P++D +WN++I GD+G A
Sbjct: 192 VFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLA 251
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCG-----------MSE-------------------- 202
R FD+MP++N SW ++ISG K G MS+
Sbjct: 252 RTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPK 311
Query: 203 EALRVFSEMEREGS--RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNA 260
+AL++F++M S +P+E+T+ +V+ A +QLG+ FG + + +G + + +
Sbjct: 312 DALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTS 371
Query: 261 LIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPN 320
LID+Y+K G + ++F + ++ VS+S+MI+G ++ MI + PN
Sbjct: 372 LIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPN 431
Query: 321 HVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 380
VTF G+L A SH GLV +G + F M+ D+ + P +HYG +VD+L RAGRLEEA E+I
Sbjct: 432 VVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLGRAGRLEEAYELI 490
Query: 381 ANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWE 440
+M + PN VWGALL LH N++ E A H +L+ GY ++ +Y+ G+W+
Sbjct: 491 KSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWD 550
Query: 441 EVSRIRRSMKSRGVKKTPGCSSITIDGVVH 470
+ +R S+K + + KT GCS ++G H
Sbjct: 551 DARTVRDSIKEKKLCKTLGCS--WVEGSYH 578
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 15/283 (5%)
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA 246
SW ++ L++ +E + V+ +M G P+ V +VL AC ++ ++ GK IH A
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 247 EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXX 306
NG VYV L+ +Y + G +E + FD + E+ VSW+S++ G+
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY----LESGEL 186
Query: 307 XXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDL 366
+ + + V++ ++ + + G + F+ M + + L+
Sbjct: 187 DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMP-----LKSPASWNILIGG 241
Query: 367 LSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYY 426
++ AR M NGV W ++ G +++ AEE R +S+ D L Y
Sbjct: 242 YVNCREMKLARTYFDAMP-QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL---VY 297
Query: 427 VVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
M Y + GK ++ ++ M R P IT+ VV
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQP--DEITLSSVV 338
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 226/418 (54%), Gaps = 12/418 (2%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ WN+ + + G LF ++S+ + T ++K +I R +
Sbjct: 112 VATWNAMIGGYMSNGDAVLASGLF---EEISVCRNTVTWIEMIKGYGKRIEIEKAREL-- 166
Query: 113 YVQKLGFQ-SNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+++ F+ N+ +++L +Y + + AR F+ +P+++ W++M+ GDV
Sbjct: 167 -FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVH 225
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
AR +F + R++ W ++I+G A+ G S++A+ F M+ EG P+ VTV ++L ACA
Sbjct: 226 EARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACA 285
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
Q G L+ G+ +H G N +V NALIDMY KCG LE VF+ + R+V +S
Sbjct: 286 QSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNS 345
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
MI A+H M +KP+ +TFI VL AC H G + +G + F+ M+
Sbjct: 346 MISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ- 404
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
+ P V+H+GCL+ LL R+G+L+EA ++ M V PN V GALLG C++H + ++AE+
Sbjct: 405 DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQV 464
Query: 412 MRHLSELDPLNDGY----YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
M+ + + + Y +SN+YA +W+ +R M+ RG++K+PG SS+ +
Sbjct: 465 MKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 192/412 (46%), Gaps = 19/412 (4%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACT-ISSDIVTGRIIHAYVQ 115
++ +K RG+P + L+ +R+ + + +L+AC + +V G+++H+
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESI 73
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K G S++++ + L+ +Y CG AR +FD+MP+++VATWN MIG +S GD A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 176 LFDSMPR-RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTV-VAVLVACAQL 233
LF+ + RN +W +I G K E+A +F M E +V + V V ++
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKM 193
Query: 234 GDL-EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
D +F + I +N +V + ++ Y + G + E +F + R +V W+++
Sbjct: 194 EDARKFFEDIPE--------KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTL 245
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G+A + M G +P+ VT +L AC+ G +D GRE +++ G
Sbjct: 246 IAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR-G 304
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
I L+D+ ++ G LE A V ++SV +++ +H K A E
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACC-NSMISCLAIHGKGKEALEMF 363
Query: 413 RHLSELDPLNDGY-YVVMSNVYAEAGKWEEVSRIRRSMKSRGVK---KTPGC 460
+ LD D ++ + G E +I MK++ VK K GC
Sbjct: 364 STMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGC 415
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 211/417 (50%), Gaps = 35/417 (8%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ W + + E G + + L ++ + P+ T + L+ C + + G+ +H
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ + S++I++ L+ +YA C V
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKR-------------------------------VDL 372
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
+F + + W+++I+G + + +AL +F M RE PN T+ ++L A A
Sbjct: 373 CFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAA 432
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVS 288
L DL +IH + GF+ ++ L+ +Y KCG LE ++F+G++E+ VV
Sbjct: 433 LADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVL 492
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
W ++I G+ MH M+RSG+ PN +TF L+ACSH GLV++G F M
Sbjct: 493 WGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFML 552
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
Y + HY C+VDLL RAGRL+EA +I + P VWGALL C H+N++L
Sbjct: 553 EHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLG 612
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
E A L EL+P N G YV+++N+YA G+W+++ ++R M++ G++K PG S+I I
Sbjct: 613 EMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 158/351 (45%), Gaps = 35/351 (9%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRL--RQLSILPDHFTCSFLLKACTISSDIVTGR 108
+++ +N ++ + G D IS+F+R+ + +PD +T F+ KA + G
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAG 168
++H + + F + +QN LL +Y ++ G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMY-------------------------------MNFG 166
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
V ARD+FD M R+V SW ++ISG + G +AL +F M E + T+V++L
Sbjct: 167 KVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP 226
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
C L DLE G+++H+ E + V NAL++MY+KCG ++E VFD M R V++
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVIT 286
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
W+ MI G+ M G++PN VT ++ C V+ G+
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
R + + L+ + ++ R++ V + S G W A++ GC
Sbjct: 347 RQQ-VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTG-PWSAIIAGC 395
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 152/353 (43%), Gaps = 35/353 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ WN+ + + G D + +F + S+ DH T +L C D+ GR +H
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V++ + ++N L+++Y CG AR
Sbjct: 243 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARF---------------------------- 274
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
+FD M RR+V +WT +I+G + G E AL + M+ EG RPN VT+ +++ C
Sbjct: 275 ---VFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ GK +H +A ++ + +LI MY KC ++ RVF G + WS++
Sbjct: 332 ALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAI 391
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G + M R ++PN T +L A + + + + + + G
Sbjct: 392 IAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-G 450
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREV---IANMSVPPNGVVWGALLGGCRLH 402
+ ++ LV + S+ G LE A ++ I + V+WGAL+ G +H
Sbjct: 451 FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 12/262 (4%)
Query: 162 GHLISA--------GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
GH++S G + AR LF+ MP+ ++ S+ VI + G+ +A+ VF M
Sbjct: 49 GHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVS 108
Query: 214 EGSR--PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
EG + P+ T V A +L ++ G +H + F R+ YV NAL+ MY+ G +
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 272 EEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHAC 331
E VFD M+ R V+SW++MI G+ + M+ + +H T + +L C
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 332 SHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV 391
H+ ++ GR ++ + +E LV++ + GR++EAR V M + +
Sbjct: 229 GHLKDLEMGRNVHKLVEEKR-LGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVIT 286
Query: 392 WGALLGGCRLHKNIKLAEEAMR 413
W ++ G +++ A E R
Sbjct: 287 WTCMINGYTEDGDVENALELCR 308
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 214/426 (50%), Gaps = 46/426 (10%)
Query: 51 PAIVPWNSCLKFFAERGAPCDT---ISLF---LRLRQLSILPDHFTCSFLLKACTISSDI 104
P++ +N+ + T SL+ L R + P+ FT L KA +
Sbjct: 69 PSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQW 128
Query: 105 -VTGRIIHAYVQKL--GFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMI 161
GR +HA+V K + +Q L+ YA+CG+
Sbjct: 129 HRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGK----------------------- 165
Query: 162 GHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLA---KCGMSEEALRVFSEMEREGSRP 218
+ AR LF+ + ++ +W ++++ A + EE L +F M+ RP
Sbjct: 166 --------LREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRP 214
Query: 219 NEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVF 278
NE+++VA++ +CA LG+ G H + N N +V +LID+Y KCGCL +VF
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 279 DGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
D M +R V +++MI G A+H +I G+ P+ TF+ + ACSH GLVD
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 339 KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+G + F M+ YGI P VEHYGCLVDLL R+GRLEEA E I M V PN +W + LG
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 399 CRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTP 458
+ H + + E A++HL L+ N G YV++SN+YA +W +V + R MK V K+P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 459 GCSSIT 464
G S++
Sbjct: 455 GISTLN 460
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 48/251 (19%)
Query: 28 LKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFA---ERGAPCDTISLFLRLRQLSI 84
L++AR+L + P DLA WN+ L +A E + + + LF+R++ +
Sbjct: 166 LREARSLFERIREP----DLA------TWNTLLAAYANSEEIDSDEEVLLLFMRMQ---V 212
Query: 85 LPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARL 144
P+ + L+K+C + V G H YV K N + L+ LY+ CG S AR
Sbjct: 213 RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARK 272
Query: 145 MFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEA 204
+FD+M Q+DV+ +N M I GLA G +E
Sbjct: 273 VFDEMSQRDVSCYNAM-------------------------------IRGLAVHGFGQEG 301
Query: 205 LRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEG-NGFLRNVYVCNALID 263
+ ++ + +G P+ T V + AC+ G ++ G I + G V L+D
Sbjct: 302 IELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVD 361
Query: 264 MYVKCGCLEEG 274
+ + G LEE
Sbjct: 362 LLGRSGRLEEA 372
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 191/340 (56%), Gaps = 2/340 (0%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLF-LRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
P+ WN ++ + P + + LF L + D FT F++KAC SS I G
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H K GF +++ QN L+ LY CG+ R +FDKMP + + +W M+ L+S
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+ +A +F+ MP RNV SWT++I+ K +EA ++F M+ + +PNE T+V +L A
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
QLG L G+ +H +A NGF+ + ++ ALIDMY KCG L++ +VFD M+ +++ +W
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 290 SSMIVGFAMHX-XXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
+SMI +H + ++P+ +TF+GVL AC++ G V G +FT M
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 388
+ YGI P EH C++ LL +A +E+A ++ +M P+
Sbjct: 381 QVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 226/445 (50%), Gaps = 9/445 (2%)
Query: 25 NHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSI 84
++ +KQ +L+ +NA ++ + +N+ ++ + G +++LF + +
Sbjct: 27 SNQIKQIHTVLLTSNALVA----SRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHV 82
Query: 85 LPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARL 144
P++ T L+KA S + G +H K GF + +Q + Y G+ +R
Sbjct: 83 QPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRK 142
Query: 145 MFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEA 204
MFD + V N ++ G++ A + F MP +V SWT+VI+G +K G+ +A
Sbjct: 143 MFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKA 202
Query: 205 LRVFSEM---EREGSRPNEVTVVAVLVACAQL--GDLEFGKSIHRFAEGNGFLRNVYVCN 259
L VF EM ER PNE T V+VL +CA G + GK IH + + +
Sbjct: 203 LMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGT 262
Query: 260 ALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
AL+DMY K G LE +FD +R++ V +W+++I A + M S + P
Sbjct: 263 ALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHP 322
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
N +T + +L AC+ LVD G + F+ + +Y I+P EHYGC+VDL+ RAG L +A
Sbjct: 323 NGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANF 382
Query: 380 IANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKW 439
I ++ P+ V GALLG C++H+N +L + L L P + G YV +S A W
Sbjct: 383 IQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNW 442
Query: 440 EEVSRIRRSMKSRGVKKTPGCSSIT 464
E ++R++M G++K P S +T
Sbjct: 443 SEAEKMRKAMIEAGIRKIPAYSVLT 467
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 222/452 (49%), Gaps = 41/452 (9%)
Query: 18 LDHATSQNHHLKQARALLIKTN-APLSH---VDLAHVPAIVPWNSCLKFFAERGAPCDTI 73
+ H NH + A L N P+ D P ++ W + L F++ + +
Sbjct: 190 ITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEAL 249
Query: 74 SLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHL 132
LF + R ++PD T +L AC + G+ IH + G SN+++++ LL +
Sbjct: 250 GLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDM 309
Query: 133 YASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVI 192
Y CG V AR +F+ M ++N SW++++
Sbjct: 310 YGKCG-------------------------------SVREARQVFNGMSKKNSVSWSALL 338
Query: 193 SGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFL 252
G + G E+A+ +F EME + + VL ACA L + GK IH G
Sbjct: 339 GGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 394
Query: 253 RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 312
NV V +ALID+Y K GC++ RV+ M R +++W++M+ A + M
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDM 454
Query: 313 IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGR 372
++ G+KP++++FI +L AC H G+VD+GR +F +M + YGI PG EHY C++DLL RAG
Sbjct: 455 VKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGL 514
Query: 373 LEEAREVIANMSVPPNGVVWGALLGGCRLHKNI-KLAEEAMRHLSELDPLNDGYYVVMSN 431
EEA ++ + +WG LLG C + + ++AE + + EL+P YV++SN
Sbjct: 515 FEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSN 574
Query: 432 VYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
+Y G+ + IR+ M RGV KT G S I
Sbjct: 575 MYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 170/375 (45%), Gaps = 43/375 (11%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D V + W S + + + +F+ + + + FT S +KAC+ ++
Sbjct: 121 DGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVR 180
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
GR H V GF+ N + + L +LY E AR +FD+MP+ DV
Sbjct: 181 LGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVIC--------- 231
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER-EGSRPNEVTVV 224
WT+V+S +K + EEAL +F M R +G P+ T
Sbjct: 232 ----------------------WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFG 269
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER 284
VL AC L L+ GK IH NG NV V ++L+DMY KCG + E +VF+GM ++
Sbjct: 270 TVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK 329
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
VSWS+++ G+ + + R + + F VL AC+ + V G+E
Sbjct: 330 NSVSWSALLGGYCQN----GEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIH 385
Query: 345 -TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK 403
+RR G V L+DL ++G ++ A V + MS+ N + W A+L L +
Sbjct: 386 GQYVRR--GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI-RNMITWNAMLSA--LAQ 440
Query: 404 NIKLAEEAMRHLSEL 418
N + EEA+ +++
Sbjct: 441 NGR-GEEAVSFFNDM 454
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 143/327 (43%), Gaps = 33/327 (10%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
LL+ C + G HA+V K G +++ + N LL LY G
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGP--------------- 111
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
+ R +FD ++ SWTS++SG +AL VF EM
Sbjct: 112 ---------------GMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS 156
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
G NE T+ + + AC++LG++ G+ H +GF N ++ + L +Y +
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 274 GCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRS-GMKPNHVTFIGVLHACS 332
RVFD M E V+ W++++ F+ + M R G+ P+ TF VL AC
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 333 HVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVW 392
++ + +G+E + + GI V L+D+ + G + EAR+V MS N V W
Sbjct: 277 NLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSW 334
Query: 393 GALLGGCRLHKNIKLAEEAMRHLSELD 419
ALLGG + + A E R + E D
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREMEEKD 361
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 92/228 (40%), Gaps = 14/228 (6%)
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
S I L K G EA+R+ + ++L C ++ G H +
Sbjct: 31 SRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKS 90
Query: 250 GFLRNVYVCNALIDMYVKCG-CLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX 308
G + V N+L+ +Y K G + E RVFDG + +SW+SM+ G+
Sbjct: 91 GLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEV 150
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVE--HY--GCLV 364
M+ G+ N T + ACS +G V GR F ++ I G E H+ L
Sbjct: 151 FVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVV-----ITHGFEWNHFISSTLA 205
Query: 365 DLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
L +AR V M P+ + W A+L KN L EEA+
Sbjct: 206 YLYGVNREPVDARRVFDEMP-EPDVICWTAVLSA--FSKN-DLYEEAL 249
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 202/408 (49%), Gaps = 31/408 (7%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
W S + F E G + I LF + PD T + +L C+ + G+ IH Y
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
+ G + L + L+++Y+ CG + AR
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGS-------------------------------LKLARQ 607
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
++D +P + S +S+ISG ++ G+ ++ +F +M G + + ++L A A +
Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
G +H + G V ++L+ MY K G +++ C+ F + +++W+++I
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIAS 727
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVP 355
+A H M G KP+ VTF+GVL ACSH GLV++ M +DYGI P
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEP 787
Query: 356 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHL 415
HY C+VD L R+GRL EA I NM + P+ +VWG LL C++H ++L + A +
Sbjct: 788 ENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKA 847
Query: 416 SELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
EL+P + G Y+ +SN+ AE G+W+EV R+ MK GV+K PG SS+
Sbjct: 848 IELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 155/358 (43%), Gaps = 41/358 (11%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSILPDHFT-CSFLLKACTISSDIVTGRIIHAYVQ 115
N + F++ P I LF R+ Q + D F+ CS L ++ + G+ +H Y
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL----SVLDCLNLGKQVHGYTL 477
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K G +L + + L LY+ CG + +F +P +D A
Sbjct: 478 KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC------------------- 518
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
W S+ISG + G EA+ +FSEM +G+ P+E T+ AVL C+
Sbjct: 519 ------------WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
L GK IH + G + + + +AL++MY KCG L+ +V+D + E VS SS+I G
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG 626
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVP 355
++ H M+ SG + +L A + G + + + G+
Sbjct: 627 YSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK-IGLCT 685
Query: 356 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
L+ + S+ G +++ + + ++ P+ + W AL+ H A EA++
Sbjct: 686 EPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHGK---ANEALQ 739
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 150/329 (45%), Gaps = 34/329 (10%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P++V W L + + + +F +R + ++ T + ++ AC S + +
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
HA+V K GF + + L+ +Y+ G+ + +F+ +
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL--------------------- 412
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
D + R+N+ + +I+ ++ +A+R+F+ M +EG R +E +V ++L
Sbjct: 413 -------DDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL--- 460
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+ L L GK +H + +G + ++ V ++L +Y KCG LEE ++F G+ + W+
Sbjct: 461 SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWA 520
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
SMI GF + M+ G P+ T VL CS + +G+E R
Sbjct: 521 SMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA 580
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
GI G++ LV++ S+ G L+ AR+V
Sbjct: 581 -GIDKGMDLGSALVNMYSKCGSLKLARQV 608
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 148/342 (43%), Gaps = 47/342 (13%)
Query: 86 PDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLM 145
PD +T S +L AC + G+++ A V K G + ++ + ++ LYA CG + A
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAM-- 305
Query: 146 FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL 205
++F +P +V SWT ++SG K + AL
Sbjct: 306 -----------------------------EVFSRIPNPSVVSWTVMLSGYTKSNDAFSAL 336
Query: 206 RVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMY 265
+F EM G N TV +V+ AC + + +H + +GF + V ALI MY
Sbjct: 337 EIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMY 396
Query: 266 VKCGCLEEGCRVF---DGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHV 322
K G ++ +VF D ++ + +V + MI F+ M++ G++ +
Sbjct: 397 SKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEF 454
Query: 323 TFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 382
+ +L S + ++ G++ + G+V + L L S+ G LEE+ ++
Sbjct: 455 SVCSLL---SVLDCLNLGKQVHGYTLKS-GLVLDLTVGSSLFTLYSKCGSLEESYKLFQG 510
Query: 383 MSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDG 424
+ N W +++ G + ++ EA+ SE+ L+DG
Sbjct: 511 IPFKDNA-CWASMISGFNEYGYLR---EAIGLFSEM--LDDG 546
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 124 ILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRR 183
ILQ LL Y L FD + + +W ++G + A LFD++P+
Sbjct: 69 ILQAHLLRRYL---------LPFDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQP 113
Query: 184 NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIH 243
+V S +ISG + + EE+LR FS+M G NE++ +V+ AC+ L F + +
Sbjct: 114 DVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVC 173
Query: 244 RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXX 303
G+ V +ALID++ K E+ +VF V W+++I G +
Sbjct: 174 CHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYG 233
Query: 304 XXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEH-YGC 362
M KP+ T+ VL AC+ + + G+ + R I G E + C
Sbjct: 234 AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK---VVQAR--VIKCGAEDVFVC 288
Query: 363 --LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+VDL ++ G + EA EV + + P+ V W +L G
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLSG 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V +S + +++ G D LF + D F S +LKA +S + G +HAY
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
+ K+G + + + LL +Y+ G F ++ D+ W
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW---------------- 721
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
T++I+ A+ G + EAL+V++ M+ +G +P++VT V VL AC+
Sbjct: 722 ---------------TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHG 766
Query: 234 GDLEFGKSIHRFAEGNGFLRNV--------YVCNALIDMYVKCGCLEEGCRVFDGMRER- 284
G +E + N +++ YVC ++D + G L E + M +
Sbjct: 767 GLVE-----ESYFHLNSMVKDYGIEPENRHYVC--MVDALGRSGRLREAESFINNMHIKP 819
Query: 285 TVVSWSSMIVGFAMH 299
+ W +++ +H
Sbjct: 820 DALVWGTLLAACKIH 834
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 203/417 (48%), Gaps = 32/417 (7%)
Query: 48 AHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTG 107
A +IV S + +AE+G + F + RQL + D +L C SS I G
Sbjct: 307 AKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 366
Query: 108 RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA 167
+H Y K G + ++ N L+ +Y+ + +F+++ + + +WN
Sbjct: 367 MSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWN--------- 417
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS-RPNEVTVVAV 226
SVISG + G + A VF +M G P+ +T+ ++
Sbjct: 418 ----------------------SVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 455
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
L C+QL L GK +H + N F +VC ALIDMY KCG + VF ++
Sbjct: 456 LAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCT 515
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
+W+SMI G+++ M G+KP+ +TF+GVL AC+H G VD+G+ F
Sbjct: 516 ATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRA 575
Query: 347 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK 406
M +++GI P ++HY +V LL RA EA +I M + P+ VWGALL C +H+ ++
Sbjct: 576 MIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELE 635
Query: 407 LAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
+ E R + LD N G YV+MSN+YA W++V R+R MK G G S I
Sbjct: 636 VGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 167/416 (40%), Gaps = 73/416 (17%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WN+ + ++ G CD LF+ + Q P T LL C + GR +H
Sbjct: 117 VVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGV 176
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
K G + + ++N L+ Y+ C E A ++F +M + +WN MIG +G A
Sbjct: 177 AAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEA 236
Query: 174 RDLFDSMPRRNVR-SWTSVISGLA-------------KCGMSEE---------------- 203
+F +M +NV S ++I+ L+ KCGM +
Sbjct: 237 ITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGC 296
Query: 204 ----------------------------------ALRVFSEMEREGSRPNEVTVVAVLVA 229
A+ FS+ + + + V +V +L
Sbjct: 297 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHG 356
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
C + ++ G S+H +A +G V N LI MY K +E +F+ ++E ++SW
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 416
Query: 290 SSMIVGFAMHXXXXXXXXXX-XXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF-TIM 347
+S+I G M+ G+ P+ +T +L CS + ++ G+E +
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 348 RRDYGIVPGVEHYGC--LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRL 401
R ++ E++ C L+D+ ++ G +A V ++ P W +++ G L
Sbjct: 477 RNNF----ENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TWNSMISGYSL 527
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 40/312 (12%)
Query: 73 ISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI--IHAYVQKLGFQSNLILQNMLL 130
I++F L + S+ P+HFT S L+A T S + ++ + ++ K G + ++ LL
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 131 HLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTS 190
+LY G + A+++FD+MP++D WN +
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWN-------------------------------A 121
Query: 191 VISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNG 250
+I G ++ G +A ++F M ++G P+ T+V +L C Q G + G+S+H A +G
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 251 FLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 310
+ V NALI Y KC L +F M++++ VSW++MI ++
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 241
Query: 311 XMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRA 370
M ++ + VT I +L A HV E + G+V + LV SR
Sbjct: 242 NMFEKNVEISPVTIINLLSA--HV-----SHEPLHCLVVKCGMVNDISVVTSLVCAYSRC 294
Query: 371 GRLEEAREVIAN 382
G L A + A+
Sbjct: 295 GCLVSAERLYAS 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 7/232 (3%)
Query: 183 RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA-QLGDLEFG-K 240
R++ + S++ +S + +F ++ R PN T+ L A + +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 241 SIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHX 300
+ +G R VYV +L+++Y+K GC+ +FD M ER V W+++I G++ +
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 301 XXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHY 360
M++ G P+ T + +L C G V +GR + + G+ +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVK 189
Query: 361 GCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
L+ S+ L A + M + V W ++G + L EEA+
Sbjct: 190 NALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGA---YSQSGLQEEAI 237
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 212/401 (52%), Gaps = 38/401 (9%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WNS + +AE G D ++L+ ++ + + PD FT +LKAC + G IH +
Sbjct: 163 WNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLV 222
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K GF ++ + N L+ +YA CG D+ AR+
Sbjct: 223 KEGFGYDVYVLNALVVMYAKCG-------------------------------DIVKARN 251
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
+FD +P ++ SW S+++G G+ EAL +F M + G P++V + +VL A++
Sbjct: 252 VFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLS 308
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
+ G+ +H + G + V NALI +Y K G L + C +FD M ER VSW+++I
Sbjct: 309 FKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII-- 366
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVP 355
+ H M R+ KP+ +TF+ VL C++ G+V+ G F++M ++YGI P
Sbjct: 367 -SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 356 GVEHYGCLVDLLSRAGRLEEAREVIAN-MSVPPNGVVWGALLGGCRLHKNIKLAEEAMRH 414
+EHY C+V+L RAG +EEA +I M + VWGALL C LH N + E A +
Sbjct: 426 KMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQR 485
Query: 415 LSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVK 455
L EL+P N+ + ++ +Y++A + E+V R+R+ M RG++
Sbjct: 486 LFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
LL+ C I G +H + ++NL + + L+ LYASCG A +FD+M ++D
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 154 VATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER 213
+ + +W S+ISG A+ G E+A+ ++ +M
Sbjct: 158 SSPF-----------------------------AWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 214 EGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEE 273
+G +P+ T VL AC +G ++ G++IHR GF +VYV NAL+ MY KCG + +
Sbjct: 189 DGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVK 248
Query: 274 GCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSH 333
VFD + + VSW+SM+ G+ H M+++G++P+ V VL +
Sbjct: 249 ARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---AR 305
Query: 334 VGLVDKGREFFT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVW 392
V GR+ ++RR G+ + L+ L S+ G+L +A + M + + V W
Sbjct: 306 VLSFKHGRQLHGWVIRR--GMEWELSVANALIVLYSKRGQLGQACFIFDQM-LERDTVSW 362
Query: 393 GALLGGCRLHKN-IKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRI 445
A++ + N +K E+ R ++ D + +V + ++ A G E+ R+
Sbjct: 363 NAIISAHSKNSNGLKYFEQMHRANAKPDGIT---FVSVLSLCANTGMVEDGERL 413
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 128/330 (38%), Gaps = 79/330 (23%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WNS L + G + + +F + Q I PD S +L GR +H +
Sbjct: 262 VSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL---SFKHGRQLHGW 318
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
V + G + L + N L+ LY+ G+ A +FD+M ++D +WN
Sbjct: 319 VIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWN--------------- 363
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
++IS +K + L+ F +M R ++P+ +T V+VL CA
Sbjct: 364 ----------------AIISAHSK---NSNGLKYFEQMHRANAKPDGITFVSVLSLCANT 404
Query: 234 GDLEFGKSIHRFAE---GNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
G +E G+ + G Y C ++++Y + G +EE
Sbjct: 405 GMVEDGERLFSLMSKEYGIDPKMEHYAC--MVNLYGRAGMMEEAY--------------- 447
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
SMIV G++ + +L+AC G D G +R
Sbjct: 448 SMIVQ------------------EMGLEAGPTVWGALLYACYLHGNTDIGE---VAAQRL 486
Query: 351 YGIVPGVEH-YGCLVDLLSRAGRLEEAREV 379
+ + P EH + L+ + S+A R E+ V
Sbjct: 487 FELEPDNEHNFELLIRIYSKAKRAEDVERV 516
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 22/229 (9%)
Query: 179 SMPRRNVRSWTSVISGL---AKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
S+ R + + SVI+ L A+ G+S +F+ ++L C L
Sbjct: 63 SIHRTQLEALDSVITDLETSAQKGISLTEPEIFA---------------SLLETCYSLRA 107
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM--RERTVVSWSSMI 293
++ G +H N+ + + L+ +Y CG E VFD M R+ + +W+S+I
Sbjct: 108 IDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLI 167
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
G+A M G+KP+ TF VL AC +G V G + ++ G
Sbjct: 168 SGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE-GF 226
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
V LV + ++ G + +AR V +M + V W ++L G H
Sbjct: 227 GYDVYVLNALVVMYAKCGDIVKARNVF-DMIPHKDYVSWNSMLTGYLHH 274
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 209/445 (46%), Gaps = 36/445 (8%)
Query: 53 IVPWNSCLKFFAERG-----APCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTG 107
+V +N+ + F + A + LF+ +++ + P T S +LKAC+ + + G
Sbjct: 318 VVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Query: 108 RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA 167
R IHA + K FQS+ + + L+ LYA G T F +QD+A
Sbjct: 378 RQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIA------------ 425
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
SWTS+I + E A +F ++ RP E TV ++
Sbjct: 426 -------------------SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
ACA L G+ I +A +G V + I MY K G + +VF ++ V
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
++S+MI A H M G+KPN F+GVL AC H GLV +G ++F M
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
+ DY I P +H+ CLVDLL R GRL +A +I + + V W ALL CR++K+ +
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVI 646
Query: 408 AEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
+ L EL+P G YV++ N+Y ++G +R M+ RGVKK P S I I
Sbjct: 647 GKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGN 706
Query: 468 VVHEFVAGDETHPQAKGIFEMWEKL 492
H F D +HP ++ I+ M E +
Sbjct: 707 QTHSFAVADLSHPSSQMIYTMLETM 731
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 160/366 (43%), Gaps = 42/366 (11%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSD---IVTGRII 110
V WNS + + GA + ++L ++ + + + +LKAC I+ + I G I
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H Y KLG + +++++ LL +YA G A +F MP ++V T+N MI + ++
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
S EA ++F +M+R G P+ T VL AC
Sbjct: 335 TDE--------------------------ASSEAFKLFMDMQRRGLEPSPSTFSVVLKAC 368
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+ LE+G+ IH N F + ++ +ALI++Y G E+G + F ++ + SW+
Sbjct: 369 SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWT 428
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
SMI + + S ++P T ++ AC+ + G + +
Sbjct: 429 SMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI-----QG 483
Query: 351 YGIVPGVEHYGCL----VDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK 406
Y I G++ + + + + +++G + A +V + P+ + A++ H +
Sbjct: 484 YAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQHGS-- 540
Query: 407 LAEEAM 412
A EA+
Sbjct: 541 -ANEAL 545
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 152/341 (44%), Gaps = 42/341 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
I+ +NS + + + G + LFL R+ ++ D FT + L C D+ G ++H
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V G + L N+L+ +Y+ CG K+ Q
Sbjct: 173 LVVVNGLSQQVFLINVLIDMYSKCG----------KLDQ--------------------- 201
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA- 231
A LFD R+ SW S+ISG + G +EE L + ++M R+G + +VL AC
Sbjct: 202 AMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCI 261
Query: 232 --QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
G +E G +IH + G ++ V AL+DMY K G L+E ++F M + VV++
Sbjct: 262 NLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTY 321
Query: 290 SSMIVGFAM-----HXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
++MI GF M R G++P+ TF VL ACS ++ GR+
Sbjct: 322 NAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIH 381
Query: 345 TIMRRDYGIVPGVEHYG-CLVDLLSRAGRLEEAREVIANMS 384
++ ++ E G L++L + G E+ + A+ S
Sbjct: 382 ALICKNN--FQSDEFIGSALIELYALMGSTEDGMQCFASTS 420
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 115/233 (49%), Gaps = 5/233 (2%)
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
++G AR LFD MP RN+ S+ S+ISG + G E+A+ +F E + ++ T L
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
C + DL+ G+ +H NG + V++ N LIDMY KCG L++ +FD ER VS
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS---HVGLVDKGREFFT 345
W+S+I G+ M R G+ VL AC + G ++KG
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ G+ + L+D+ ++ G L+EA ++ + M N V + A++ G
Sbjct: 277 YTAK-LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISG 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 113/286 (39%), Gaps = 58/286 (20%)
Query: 264 MYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVT 323
MY KC L ++FD M ER ++S++S+I G+ + +K + T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 324 FIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 383
+ G L C +D G ++ + G+ V L+D+ S+ G+L++A + +
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVN-GLSQQVFLINVLIDMYSKCGKLDQAMSLF-DR 208
Query: 384 SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL--DPLNDGYYVVMS----------- 430
+ V W +L+ G + + AEE + L+++ D LN Y + S
Sbjct: 209 CDERDQVSWNSLISG---YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE 265
Query: 431 -----------------------------NVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
++YA+ G +E ++ M S+ V
Sbjct: 266 GFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV------- 318
Query: 462 SITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 507
+T + ++ F+ DE +A E + KL + M+ +G P S
Sbjct: 319 -VTYNAMISGFLQMDEITDEASS--EAF-KLFMDMQRRGLEPSPST 360
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 206/411 (50%), Gaps = 31/411 (7%)
Query: 47 LAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVT 106
LA ++ WNS L F + L L++ Q + D +T S LK C ++
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL 360
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
G +H+ V G++ + I+ ++L+ L+A+
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHAN------------------------------- 389
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAV 226
G++ A LF +P +++ +++ +I G K G + A +F E+ + G ++ V +
Sbjct: 390 VGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNI 449
Query: 227 LVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV 286
L C+ L L +GK IH G+ AL+DMYVKCG ++ G +FDGM ER V
Sbjct: 450 LKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDV 509
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
VSW+ +IVGF + MI G++PN VTF+G+L AC H GL+++ R
Sbjct: 510 VSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLET 569
Query: 347 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK 406
M+ +YG+ P +EHY C+VDLL +AG +EA E+I M + P+ +W +LL C HKN
Sbjct: 570 MKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAG 629
Query: 407 LAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT 457
L L + P + Y +SN YA G W+++S++R + K G K++
Sbjct: 630 LVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKES 680
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 172/390 (44%), Gaps = 21/390 (5%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLR-LRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
IV W + + + G P I L+ R L + F S +LKAC + DI G +++
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
+ K + +++L N ++ +Y G A F ++ + +WN +I AG +
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
A LF MP+ NV SW +ISG G S AL M+REG + + L AC+
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR---ERTVVS 288
G L GK +H +G + + +ALIDMY CG L VF + +V
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
W+SM+ GF ++ + +S + + T G L C + + G + +++
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV- 368
Query: 349 RDYGIVPGVE-HY---GCLVDLLSRAGRLEEAREVIANMSVPPNG--VVWGALLGGCRLH 402
+V G E Y LVDL + G +++A ++ + PN + + L+ GC
Sbjct: 369 ----VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL---PNKDIIAFSGLIRGCVKS 421
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNV 432
LA R L +L D + ++SN+
Sbjct: 422 GFNSLAFYLFRELIKLGLDADQF--IVSNI 449
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 203/493 (41%), Gaps = 82/493 (16%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V WN + F ++G+P + +R+++ ++ D F LKAC+ + G+ +
Sbjct: 202 PNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQL 260
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H V K G +S+ + L+ +Y++CG +A D Q+ +A
Sbjct: 261 HCCVVKSGLESSPFAISALIDMYSNCGSLIYAA---DVFHQEKLAV-------------- 303
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
+V W S++SG +E AL + ++ + + T+ L C
Sbjct: 304 -----------NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKIC 352
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+L G +H +G+ + V + L+D++ G +++ ++F + + ++++S
Sbjct: 353 INYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFS 412
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI-MRR 349
+I G +I+ G+ + +L CS + + G++ + +++
Sbjct: 413 GLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKK 472
Query: 350 DYGIVP------------------GVEHYGCLV--DLLS---------RAGRLEEAREV- 379
Y P GV + ++ D++S + GR+EEA
Sbjct: 473 GYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYF 532
Query: 380 --IANMSVPPNGVVWGALLGGCR---LHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYA 434
+ N+ + PN V + LL CR L + + E M+ L+P + YY V+ ++
Sbjct: 533 HKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVV-DLLG 591
Query: 435 EAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLV 494
+AG ++E + + M KT S +T G TH A + + EKLL
Sbjct: 592 QAGLFQEANELINKMPLEP-DKTIWTSLLTACG----------THKNAGLVTVIAEKLL- 639
Query: 495 KMKMKGYIPDTSV 507
KG+ D SV
Sbjct: 640 ----KGFPDDPSV 648
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 45/318 (14%)
Query: 33 ALLIKTNAPLSHVDLAH-----VPA--IVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL 85
++L+ +A + ++ AH +P I+ ++ ++ + G LF L +L +
Sbjct: 381 SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLD 440
Query: 86 PDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLM 145
D F S +LK C+ + + G+ IH K G++S + L+ +Y CGE + ++
Sbjct: 441 ADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVL 500
Query: 146 FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL 205
FD M ++DV SWT +I G + G EEA
Sbjct: 501 FDGMLERDVV-------------------------------SWTGIIVGFGQNGRVEEAF 529
Query: 206 RVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNV---YVCNALI 262
R F +M G PN+VT + +L AC G LE +S + L Y C ++
Sbjct: 530 RYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYC--VV 587
Query: 263 DMYVKCGCLEEGCRVFDGM-RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
D+ + G +E + + M E W+S++ H +++ G +
Sbjct: 588 DLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK-GFPDDP 646
Query: 322 VTFIGVLHACSHVGLVDK 339
+ + +A + +G+ D+
Sbjct: 647 SVYTSLSNAYATLGMWDQ 664
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 23/343 (6%)
Query: 95 LKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDV 154
L+ C G I A+V K G N+ + N ++ +Y S A +FD+M ++++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 155 ATWNIMIGHLISAGDVGAARDLFDSM-----PRRNVRSWTSVISGLAKCGMSEEALRVFS 209
TW M+ S G A +L+ M N +++V+ G + + V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 210 EMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVY-----VCNALIDM 264
+ +E R + V + +V+ + G R E N + + N LI
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNG---------RLIEANSSFKEILRPSSTSWNTLISG 182
Query: 265 YVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
Y K G ++E +F M + VVSW+ +I GF + M R G+ +
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF-VDKGSPRALEFLVRMQREGLVLDGFAL 241
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI--AN 382
L ACS GL+ G++ + + G+ L+D+ S G L A +V
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 383 MSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY 425
++V + VW ++L G +++ + A + + + D D Y
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSY 343
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+ A L C ++ + G+SI G +NV++ N +I MYV L + +VFD M
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMK-PNHVTFIGVLHACSHVGLVDKGR 341
ER +V+W++M+ G+ M+ S + N + VL AC VG + G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 342 EFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ + ++ + V +VD+ + GRL EA + + P+ W L+ G
Sbjct: 128 LVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISG 182
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 220/440 (50%), Gaps = 39/440 (8%)
Query: 71 DTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLL 130
D +S+FL +R + P+ T L+ A + I G IH K GF S + N +
Sbjct: 355 DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFI 414
Query: 131 HLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTS 190
LYA F+ + A+ F+ + R + SW +
Sbjct: 415 TLYAK----------FEALED---------------------AKKAFEDITFREIISWNA 443
Query: 191 VISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEF--GKSIHRFAEG 248
+ISG A+ G S EAL++F E + PNE T +VL A A D+ G+ H
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 249 NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXX 308
G V +AL+DMY K G ++E +VF+ M ++ W+S+I ++ H
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLS 368
MI+ + P+ VTF+ VL AC+ G+VDKG E F +M Y + P EHY C+VD+L
Sbjct: 563 FHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLG 622
Query: 369 RAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVV 428
RAGRL+EA E+++ + P + ++LG CRLH N+K+ + E+ P G YV
Sbjct: 623 RAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQ 682
Query: 429 MSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG-----VVHEFVAGDETHPQAK 483
M N+YAE +W++ + IR++M+ + V K G S I + + F +GD++HP++
Sbjct: 683 MYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSD 742
Query: 484 GIFEMWEKLLVKMKMKGYIP 503
I+ M E + ++M ++G +
Sbjct: 743 EIYRMVEIIGLEMNLEGKVA 762
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 44/350 (12%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V WN+ L F + ++ +R++ ++ D FT S L C S + G +
Sbjct: 140 PDVVSWNTILSGFDDNQIA---LNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
+ V K G +S+L++ N + +Y+ +G
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSR-------------------------------SGSF 225
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCG-MSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
AR +FD M +++ SW S++SGL++ G EA+ +F +M REG + V+ +V+
Sbjct: 226 RGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITT 285
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
C DL+ + IH G+ + V N L+ Y KCG LE VF M ER VVSW
Sbjct: 286 CCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSW 345
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI-MR 348
++MI M G+ PN VTF+G+++A + +G + + ++
Sbjct: 346 TTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ P V + + L ++ LE+A++ +++ + W A++ G
Sbjct: 401 TGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFREI-ISWNAMISG 447
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 152/358 (42%), Gaps = 44/358 (12%)
Query: 53 IVPWNSCLKFFAERGA-PCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++ WNS L ++ G + + +F + + + DH + + ++ C +D+ R IH
Sbjct: 240 MISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIH 299
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
K G++S L + N+L+ Y+ CG + +F +M +++V +W MI
Sbjct: 300 GLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--------- 350
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
++A+ +F M +G PNEVT V ++ A
Sbjct: 351 ---------------------------SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVK 383
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
++ G IH GF+ V N+ I +Y K LE+ + F+ + R ++SW++
Sbjct: 384 CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNA 443
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS---HVGLVDKGREFFTIMR 348
MI GFA + M PN TF VL+A + + + R +++
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIK 406
P V L+D+ ++ G ++E+ +V MS N VW +++ H + +
Sbjct: 503 LGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFE 557
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 129/336 (38%), Gaps = 44/336 (13%)
Query: 66 RGAPCDTISLFLRLRQLSILPDHF---TCSFLLKACTISSDIVTGRIIHAYVQKLGFQSN 122
R +P +S+F QL H T LKAC D+ G IH + GF S
Sbjct: 53 RNSPARALSIFKENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSF 110
Query: 123 LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPR 182
+ + N ++ +Y G +A +F+ + DV
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV--------------------------- 143
Query: 183 RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSI 242
SW +++SG ++ AL M+ G + T L C G +
Sbjct: 144 ----SWNTILSGFDD---NQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMH-XX 301
G ++ V N+ I MY + G RVFD M + ++SW+S++ G +
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF 256
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI-MRRDYGIVPGVEHY 360
M+R G++ +HV+F V+ C H + R+ + ++R Y + +E
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL--LEVG 314
Query: 361 GCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
L+ S+ G LE + V MS N V W ++
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMI 349
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 26/261 (9%)
Query: 173 ARDLFDSMPRRN-VRSWTSVISGLAKCGMSEEALRVFSE---MEREGSRPNEVTVVAVLV 228
A LFD +RN S IS + AL +F E + G +EVT+ L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
AC GDL+ G IH F+ +GF V V NA++ MY K G + +F+ + + VVS
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSH-----VGLVDKGREF 343
W++++ GF M +G+ + T+ L C +GL +
Sbjct: 145 WNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 344 FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH- 402
T + D +V G + + SR+G AR V MS + + W +LL G
Sbjct: 202 KTGLESD--LVVG----NSFITMYSRSGSFRGARRVFDEMSF-KDMISWNSLLSGLSQEG 254
Query: 403 ----KNIKLAEEAMRHLSELD 419
+ + + + MR ELD
Sbjct: 255 TFGFEAVVIFRDMMREGVELD 275
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 221/439 (50%), Gaps = 6/439 (1%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+ WN+ + +A+ G + + + + + + + D + +L + + G+ +HA
Sbjct: 226 ISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHAR 285
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
V K G SN + + ++ +Y CG +A ++ + + MI S G + A
Sbjct: 286 VLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEA 345
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL---RVFSEMEREGSRPNEVTVVAVLVAC 230
+ LFDS+ +N+ WT++ G + L R F + E + P+ + +V+VL AC
Sbjct: 346 KRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF--IANETNTPDSLVMVSVLGAC 403
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+ +E GK IH + G L + + A +DMY KCG +E R+FD ER V ++
Sbjct: 404 SLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYN 463
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
+MI G A H M G KP+ +TF+ +L AC H GLV +G ++F M
Sbjct: 464 AMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEA 523
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM-SVPPNGVVWGALLGGCRLHKNIKLAE 409
Y I P HY C++DL +A RL++A E++ + V + V+ GA L C +KN +L +
Sbjct: 524 YNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVK 583
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
E L ++ N Y+ ++N YA +G+W+E+ RIR M+ + ++ GCS ID
Sbjct: 584 EVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQF 643
Query: 470 HEFVAGDETHPQAKGIFEM 488
H F + D +H + + I+ M
Sbjct: 644 HMFTSSDISHYETEAIYAM 662
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 179/416 (43%), Gaps = 50/416 (12%)
Query: 26 HHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAER-GAPCDTISLF---LRLRQ 81
+++K+AR L N ++ +N+ L FA+ G + I +F R +
Sbjct: 68 NNVKEARELFESDNCERD---------LITYNTLLSGFAKTDGCESEAIEMFGEMHRKEK 118
Query: 82 LSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSH 141
I D FT + ++K +++ G +H + K G + L+H+Y+ CG+
Sbjct: 119 DDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKE 178
Query: 142 ARLMFDKMPQQ--DVATWNIMIGHLISAGDVGAARDLFDSMPRRN-VRSWTSVISGLAKC 198
+F+ + D N MI GD+ A +F P N SW ++I+G A+
Sbjct: 179 VCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQN 238
Query: 199 GMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVC 258
G EEAL++ ME G + +E + AVL + L L+ GK +H NG N +V
Sbjct: 239 GYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVS 298
Query: 259 NALIDMYVKCGCLE-------------------------------EGCRVFDGMRERTVV 287
+ ++D+Y KCG ++ E R+FD + E+ +V
Sbjct: 299 SGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLV 358
Query: 288 SWSSMIVGF-AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
W++M +G+ + + P+ + + VL ACS ++ G+E
Sbjct: 359 VWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGH 418
Query: 347 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH 402
R GI+ + VD+ S+ G +E A E I + S + V++ A++ GC H
Sbjct: 419 SLRT-GILMDKKLVTAFVDMYSKCGNVEYA-ERIFDSSFERDTVMYNAMIAGCAHH 472
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 39/275 (14%)
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
G + H K G + N L++LY+ G AR +FD+M +++V +WN +I +
Sbjct: 7 GFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66
Query: 167 AGDVGAARDLFDSMP-RRNVRSWTSVISGLAKC-GMSEEALRVFSEMEREGSRP---NEV 221
+V AR+LF+S R++ ++ +++SG AK G EA+ +F EM R+ ++
Sbjct: 67 FNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
TV ++ A+L ++ +G+ +H G + ++LI MY KCG +E C +F+G
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 282 ------------------RERTV----------------VSWSSMIVGFAMHXXXXXXXX 307
RE + +SW+++I G+A +
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK 246
Query: 308 XXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE 342
M +G+K + +F VL+ S + + G+E
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKE 281
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 220/418 (52%), Gaps = 9/418 (2%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRII 110
++V +N+ + E G S+F +R+ S P+ T + AC ++ GR +
Sbjct: 194 SVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQ-QDVATWNIMIGHLISAGD 169
H V K FQ ++ L+ +Y+ C A ++F ++ +++ +WN +I ++ G
Sbjct: 254 HGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
Query: 170 VGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
A +LF+ + ++ +W S+ISG ++ G EA + F M P+ + +
Sbjct: 314 HETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTS 373
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM--RE 283
+L AC+ + L+ GK IH R+++V +LIDMY+KCG R+FD +
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 284 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREF 343
+ V W+ MI G+ H + ++P+ TF VL ACSH G V+KG +
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
Query: 344 FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHK 403
F +M+ +YG P EH GC++DLL R+GRL EA+EVI MS P + V +LLG CR H
Sbjct: 494 FRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHL 552
Query: 404 NIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
+ L EEA L+EL+P N +V++S++YA +WE+V IR+ + + + K PG S
Sbjct: 553 DPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 166/374 (44%), Gaps = 41/374 (10%)
Query: 82 LSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSH 141
LS P+ FT LLK+C D+V GRI+HA V K GF ++ L+ +Y
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMY-------- 76
Query: 142 ARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMS 201
+ V A + D MP R + S + +SGL + G
Sbjct: 77 -----------------------MKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFC 113
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
+A R+F + GS N VTV +VL C GD+E G +H A +GF VYV +L
Sbjct: 114 RDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSL 170
Query: 262 IDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-SGMKPN 320
+ MY +CG R+F+ + ++VV++++ I G + M + S +PN
Sbjct: 171 VSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPN 230
Query: 321 HVTFIGVLHACSHVGLVDKGREFF-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
VTF+ + AC+ + + GR+ +M++++ V L+D+ S+ + A V
Sbjct: 231 DVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT--ALIDMYSKCRCWKSAYIV 288
Query: 380 IANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSE--LDPLNDGYYVVMSNVYAEAG 437
+ N + W +++ G ++ + A E L L P + + ++S +++ G
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISG-FSQLG 347
Query: 438 KWEEVSRIRRSMKS 451
K E + M S
Sbjct: 348 KVIEAFKFFERMLS 361
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 137/318 (43%), Gaps = 38/318 (11%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
I N+ + E G D +F R + T + +L C DI G +H
Sbjct: 96 GIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLH 152
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
K GF+ + + L+ +Y+ CGE A MF+K+P + V T+N I L+ G +
Sbjct: 153 CLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMN 212
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+F+ M R FS E PN+VT V + ACA
Sbjct: 213 LVPSVFNLM-------------------------RKFSSEE-----PNDVTFVNAITACA 242
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE-RTVVSWS 290
L +L++G+ +H F V ALIDMY KC C + VF +++ R ++SW+
Sbjct: 243 SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWN 302
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S+I G ++ + G+KP+ T+ ++ S +G V + +FF M
Sbjct: 303 SVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM-LS 361
Query: 351 YGIVPGVEHYGCLVDLLS 368
+VP ++ CL LLS
Sbjct: 362 VVMVPSLK---CLTSLLS 376
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P WNS + F++ G + F R+ + ++P + LL AC+ + G+ I
Sbjct: 331 PDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM-PQ-QDVATWNIMIGHLISAG 168
H +V K + ++ + L+ +Y CG +S AR +FD+ P+ +D WN+M
Sbjct: 391 HGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVM-------- 442
Query: 169 DVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
ISG K G E A+ +F + E P+ T AVL
Sbjct: 443 -----------------------ISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLS 479
Query: 229 ACAQLGDLEFGKSIHRF-AEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
AC+ G++E G I R E G+ + +ID+ + G L E V D M
Sbjct: 480 ACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 185/363 (50%), Gaps = 11/363 (3%)
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
C + L+ K++H + ++ + L++MY CG E VF+ M E+ + +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+I FA + G P+ F G+ +AC +G VD+G F M R
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
DYGI P +E Y LV++ + G L+EA E + M + PN VW L+ R+H N++L +
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 410 EAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVV 469
+ LDP + +A E+ S +RS GVK + +
Sbjct: 444 YCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGILHGVKSS-----------M 492
Query: 470 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLA 529
EF AGD P+ +F++ L + M GY+ +T + L D++ E KE L HSE++A
Sbjct: 493 QEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIA 552
Query: 530 LVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCK 589
++N+ P P ++KNLRVC DCH ALK++S+I RE++ RD RFH KNGACTCK
Sbjct: 553 FARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCK 612
Query: 590 DYW 592
DYW
Sbjct: 613 DYW 615
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 129 LLHLYASCGET---SHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMP 181
LL L CGE A+ + K+ D+++ ++++ + G A +F+ M
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 182 RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFG-K 240
+N+ +W +I AK G E+A+ +FS + EG+ P+ + AC LGD++ G
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 241 SIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM-RERTVVSWSSMI 293
+ G ++ +L++MY G L+E + M E V W +++
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/471 (30%), Positives = 228/471 (48%), Gaps = 80/471 (16%)
Query: 67 GAPCDTISLFLRLRQLSILPDHFTCSF--LLKACTISSDIVTGRIIHAYVQKLGFQSNLI 124
G P DT++LFL++ + S PD + +F +L AC++ S TGR +HA + K G ++ I
Sbjct: 63 GNPNDTLALFLQIHRAS--PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 125 LQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRN 184
+ L+ +Y+ G + +F+ + ++D+ +WN ++ + G A +F +M R
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 185 VRS--------------------------------------WTSVISGLAKCGMSEEALR 206
V T++IS + G+ EA++
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMK 240
Query: 207 VFSEME---------------------REG------SRPNEVTVVAVLVACAQLGDLEFG 239
V++ + +E RPN + + L C+ DL G
Sbjct: 241 VYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIG 300
Query: 240 KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMH 299
K IH A NGF+ + +CN L+DMY KCG + + +F + ++VVSW+SMI +A++
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 300 XXXXXXXXXXXXMIR--SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGV 357
M SG+ PN VTF+ V+ AC+H GLV +G+E F +M+ Y +VPG
Sbjct: 361 GDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGT 420
Query: 358 EHYGCLVDLLSRAGRLEEAREVIA------NMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
EHY C +D+LS+AG EE ++ N S+P +W A+L C L+ ++ E
Sbjct: 421 EHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPC--AIWVAVLSACSLNMDLTRGEYV 478
Query: 412 MRHL-SELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
R L E P N YV++SN YA GKW+ V +R +K++G+ KT G S
Sbjct: 479 ARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 8/239 (3%)
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A LFD +P+R++ S S +S + G + L +F ++ R + T VL AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
L E G+ +H G ALIDMY K G L + RVF+ + E+ +VSW+++
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGRE---FFTIMRR 349
+ GF + M R ++ + T V+ C+ + ++ +G++ + R
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
D +V G ++ S G + EA +V +++V + V+ +L+ GC ++N K A
Sbjct: 217 DL-VVLGT----AMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA 270
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 149/517 (28%), Positives = 243/517 (47%), Gaps = 81/517 (15%)
Query: 16 THLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISL 75
T L + N L AR L D+ ++ WNS ++ +A+ +SL
Sbjct: 44 TQLARFYALNDDLISARKLF----------DVFPERSVFLWNSIIRAYAKAHQFTTVLSL 93
Query: 76 FLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH--AYVQKLGFQS------------ 121
F ++ + PD+FT + L + + S D R IH A V LGF
Sbjct: 94 FSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSK 153
Query: 122 -----------------NLILQNMLLHLYASCGETSHARLMFDKM--------------- 149
+L L N+++ Y CG +F+ M
Sbjct: 154 AGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVAL 213
Query: 150 ------PQQDVATWNI----MIGHLISAGDVG--------------AARDLFDSMPRRNV 185
P + W++ + +L S VG +A +F+S+ ++
Sbjct: 214 TSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDL 273
Query: 186 RSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRF 245
+ +S+I+G ++CG +EAL +F+E+ G +P+ V V VL +CA+L D GK +H +
Sbjct: 274 VACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSY 333
Query: 246 AEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXX 305
G ++ VC+ALIDMY KCG L+ +F G+ E+ +VS++S+I+G +H
Sbjct: 334 VIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTA 393
Query: 306 XXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVD 365
++ G+ P+ +TF +L C H GL++KG+E F M+ ++GI P EHY +V
Sbjct: 394 FEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVK 453
Query: 366 LLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL-DPLNDG 424
L+ AG+LEEA E + ++ P + + GALL C +H+N LAE ++ + +
Sbjct: 454 LMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSV 513
Query: 425 YYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
Y V++SNVYA G+W+EV R+R + K PG S
Sbjct: 514 YKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 218/500 (43%), Gaps = 80/500 (16%)
Query: 28 LKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPD 87
L LL KT +H DL V WNS + F++ G +LF +
Sbjct: 444 LTTQAELLFKTT---THRDL------VSWNSMISAFSQNGFTHKAKNLFKEV------VS 488
Query: 88 HFTCS--------FLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQ------------- 126
++CS +L +C S ++ G+ +H ++QKLG ++ L+
Sbjct: 489 EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSW 548
Query: 127 NMLLHLYASCGETSHARLMFDKMPQQ---------------------------------- 152
N ++ AS G + F M ++
Sbjct: 549 NSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAI 608
Query: 153 ------DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALR 206
D N +I D+ +A +F + N+ SW VIS L++ E +
Sbjct: 609 KSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQ 668
Query: 207 VFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYV 266
+F ++ E PNE+T V +L A QLG +G H GF N +V AL+DMY
Sbjct: 669 LFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYS 725
Query: 267 KCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI-RSGMKPNHVTFI 325
CG LE G +VF ++ +W+S+I H + S M+PN +FI
Sbjct: 726 SCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFI 785
Query: 326 GVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 385
+L ACSH G +D+G ++ M +G+ P EH +VD+L RAG+L EA E I +
Sbjct: 786 SLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGE 845
Query: 386 PPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRI 445
P VWGALL C H + KL +E L E++P N YY+ ++N Y G WEE R+
Sbjct: 846 PQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRL 905
Query: 446 RRSMKSRGVKKTPGCSSITI 465
R+ ++ +KK PG S I +
Sbjct: 906 RKMVEDNALKKLPGYSVIDV 925
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 145/354 (40%), Gaps = 59/354 (16%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
IV WN+ + G P ++ F + D T S ++ AC+ ++ G +H
Sbjct: 254 IVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHG 313
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V K G+ P+ V+ N +I GD A
Sbjct: 314 LVIKSGYS-----------------------------PEAHVSVGNSIISMYSKCGDTEA 344
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMER-EGSRPNEVTVVAVLVACA 231
A +F+ + R+V S ++++G A GM EEA + ++M+ + +P+ TVV++ C
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC- 403
Query: 232 QLGDLEF---GKSIHRFAEGNGFL-RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
GDL F G+++H + R + V N++IDMY KCG + +F R +V
Sbjct: 404 --GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV 461
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIR--SGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
SW+SMI F+ + ++ S K + T + +L +C + G+
Sbjct: 462 SWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC 521
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
+++ L DL S RLE MS + W +++ GC
Sbjct: 522 WLQK-------------LGDLTSAFLRLE-------TMSETRDLTSWNSVISGC 555
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 173/419 (41%), Gaps = 58/419 (13%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLS-ILPDHFTCSFLLKACTISSDIVTGRIIH 111
++ N+ L FA G + + +++ + I PD T + C S GR +H
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 112 AYVQKLGFQSN-LILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
Y ++ QS L + N ++ +Y CG T+ A L
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAEL-------------------------- 450
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM--EREGSRPNEVTVVAVLV 228
LF + R++ SW S+IS ++ G + +A +F E+ E S+ + TV+A+L
Sbjct: 451 -----LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILT 505
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
+C L FGKS+H + + G L + ++ R+ R + S
Sbjct: 506 SCDSSDSLIFGKSVHCWLQKLGDLTSAFL------------------RLETMSETRDLTS 547
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
W+S+I G A M R G ++ + +T +G + A ++GLV +GR F +
Sbjct: 548 WNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLA 607
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
+ + + L+ + R +E A +V +S PN W ++ +K +
Sbjct: 608 IKSLRELD-TQLQNTLITMYGRCKDIESAVKVFGLIS-DPNLCSWNCVISALSQNKAGRE 665
Query: 408 AEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITID 466
+ R+L +L+P N+ +V + + + G + + RG + P S+ +D
Sbjct: 666 VFQLFRNL-KLEP-NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVD 722
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 35/347 (10%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ WNS + + G + LF+ + D T A + ++H
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ G + L N L++LYA S A +F M +D+ +WN ++ ++ G
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH--- 269
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
PR+ +L+ F M G + VT V+ AC+
Sbjct: 270 --------PRK--------------------SLQYFKSMTGSGQEADTVTFSCVISACSS 301
Query: 233 LGDLEFGKSIHRFAEGNGFL--RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+ +L G+S+H +G+ +V V N++I MY KCG E VF+ + R V+S +
Sbjct: 302 IEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSN 361
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIR-SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+++ GFA + M ++P+ T + + C + +GR R
Sbjct: 362 AILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVR 421
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
+E ++D+ + G +A E++ + + V W +++
Sbjct: 422 MEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMI 467
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 9/312 (2%)
Query: 152 QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM 211
QD+AT + ++ G++ ++ LFD + ++V W S+I+ L + G A+ +F EM
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 212 EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
+G+ + T++ A + L +H A G + + +CNAL+++Y K L
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 272 EEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHAC 331
VF M R +VSW++++ + M SG + + VTF V+ AC
Sbjct: 240 SSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 332 SHVGLVDKGREFF-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGV 390
S + + G +++ Y V ++ + S+ G E A V + V + +
Sbjct: 300 SSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCRDVI 358
Query: 391 VWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNV-------YAEAGKWEEVS 443
A+L G + + A + + +D + V+S ++ G+
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 444 RIRRSMKSRGVK 455
+R M+SR ++
Sbjct: 419 TVRMEMQSRALE 430
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 204/416 (49%), Gaps = 33/416 (7%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P++ WN+ L ++ + IS F +++ ++ PD T S +L +C + G+ I
Sbjct: 379 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDK-MPQQDVATWNIMIGHLISAGD 169
H V + N + + L+ +Y+ C + + +FD + + D+A WN
Sbjct: 439 HGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWN----------- 487
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR-PNEVTVVAVLV 228
S+ISG + +AL +F M + PNE + VL
Sbjct: 488 --------------------SMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 527
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
+C++L L G+ H +G++ + +V AL DMY KCG ++ + FD + + V
Sbjct: 528 SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVI 587
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
W+ MI G+ + MI SG KP+ +TF+ VL ACSH GLV+ G E + M+
Sbjct: 588 WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQ 647
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
R +GI P ++HY C+VD L RAGRLE+A ++ + V+W LL CR+H ++ LA
Sbjct: 648 RIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLA 707
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSIT 464
L LDP + YV++SN Y+ +W++ + ++ M V KTPG S T
Sbjct: 708 RRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTT 763
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 129/225 (57%), Gaps = 1/225 (0%)
Query: 105 VTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
++G++IH ++ ++G +S+ L N LL LY CG+ +AR +FD+M +DV +WN +
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
GD+G A ++FD MP R+V SW ++IS L + G E+AL V+ M +G P+ T+
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCG-CLEEGCRVFDGMRE 283
+VL AC+++ D FG H A G +N++V NAL+ MY KCG ++ G RVF+ + +
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 284 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVL 328
VS++++I G A M G++ + V +L
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 177/394 (44%), Gaps = 48/394 (12%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLL------KACTISSDI 104
P V + + + A + + +F + + + D S +L + C S+I
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEI 262
Query: 105 V---TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMI 161
G+ IH +LGF +L L N LL +YA + + A L+F +MP+ +V +WNIMI
Sbjct: 263 YGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 162 -----------------------------------GHLISAGDVGAARDLFDSMPRRNVR 186
G +GDV R +F S+P+ +V
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVS 382
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA 246
+W +++SG + EEA+ F +M+ + +P++ T+ +L +CA+L LE GK IH
Sbjct: 383 AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVV 442
Query: 247 EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG-MRERTVVSWSSMIVGFAMHXXXXXX 305
+N ++ + LI +Y +C +E +FD + E + W+SMI GF +
Sbjct: 443 IRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKA 502
Query: 306 XXXXXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLV 364
M ++ + PN +F VL +CS + + GR+F ++ + G V L
Sbjct: 503 LILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKS-GYVSDSFVETALT 561
Query: 365 DLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
D+ + G ++ AR+ + + N V+W ++ G
Sbjct: 562 DMYCKCGEIDSARQFF-DAVLRKNTVIWNEMIHG 594
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 153/359 (42%), Gaps = 47/359 (13%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN+ + +G + ++ R+ LP FT + +L AC+ D V G H
Sbjct: 103 VVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHG 162
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
K G N+ + N LL +YA CG + + + +
Sbjct: 163 VAVKTGLDKNIFVGNALLSMYAKCGF---------------IVDYGVRV----------- 196
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV---- 228
F+S+ + N S+T+VI GLA+ EA+++F M +G + + V + +L
Sbjct: 197 ----FESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAP 252
Query: 229 --ACAQLGDL---EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE 283
C L ++ E GK IH A GF ++++ N+L+++Y K + +F M E
Sbjct: 253 REGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE 312
Query: 284 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREF 343
VVSW+ MIVGF M SG +PN VT I VL AC G V+ GR
Sbjct: 313 VNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI 372
Query: 344 FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGC 399
F+ + + P V + ++ S EEA M ++ P+ +L C
Sbjct: 373 FSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 212/430 (49%), Gaps = 41/430 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
IV WNS L F + + +F + Q ++ D T LL+ C + + IH
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ + G++SN + + L+ Y SC V
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSL-------------------------------VDD 381
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A + DSM ++V S +++ISGLA G S+EA+ +F M PN +TV+++L AC+
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSV 438
Query: 233 LGDLEFGKSIHRFAEGNGF-LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
DL K H A + ++ V +++D Y KCG +E R FD + E+ ++SW+
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF-TIMRRD 350
+I +A++ M + G PN VT++ L AC+H GLV KG F +++ D
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM--SVPPNGVVWGALLGGCR-LHKNIKL 407
+ P ++HY C+VD+LSRAG ++ A E+I N+ V WGA+L GCR K + +
Sbjct: 559 HK--PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLII 616
Query: 408 AEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
E + + EL+PL Y++ S+ +A WE+V+ +RR +K R V+ G S +
Sbjct: 617 TSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGN 676
Query: 468 VVHEFVAGDE 477
+ F+AGD+
Sbjct: 677 LAKRFLAGDK 686
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 206/493 (41%), Gaps = 90/493 (18%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V WN + + G + + F +LR P+ T ++ AC S G IH Y
Sbjct: 93 VSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACR--SLWFDGEKIHGY 150
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
V + GF +QN +L +YA D +A
Sbjct: 151 VIRSGFCGISSVQNSILCMYAD--------------------------------SDSLSA 178
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREG-SRPNEVTVVAVLVACAQ 232
R LFD M R+V SW+ VI + L++F EM E + P+ VTV +VL AC
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 233 LGDLEFGKSIHRFAEGNGF-LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+ D++ G+S+H F+ GF L +V+VCN+LIDMY K ++ RVFD R +VSW+S
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNS 298
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS-----------HVGLVDKG 340
++ GF + M++ ++ + VT + +L C H ++ +G
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 341 REFFTI-------------MRRDYGIVPGVEHY------GCLVDLLSRAGRLEEAREVIA 381
E + + D G V Y ++ L+ AGR +EA +
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 382 NMSVPPNGVVWGALLGGCRLHKNIKLAEE----AMRHLSELDPLNDGYYVVMSNVYAEAG 437
+M PN + +LL C + +++ ++ A+R ++ ++ G +V + YA+ G
Sbjct: 419 HMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV--DAYAKCG 476
Query: 438 KWEEVSRIRRSMKSRGVKK-TPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 496
E R + + + T S+ I+G+ + +A L +M
Sbjct: 477 AIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALA-----------------LFDEM 519
Query: 497 KMKGYIPDTSVVL 509
K KGY P+ L
Sbjct: 520 KQKGYTPNAVTYL 532
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 163/387 (42%), Gaps = 50/387 (12%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++ W+ ++ + + P + LF + + PD T + +LKACT+ DI GR +H
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVH 249
Query: 112 AYVQKLGFQ-SNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
+ + GF +++ + N L+ +Y+ DV
Sbjct: 250 GFSIRRGFDLADVFVCNSLIDMYSK-------------------------------GFDV 278
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
+A +FD RN+ SW S+++G +EAL +F M +E +EVTVV++L C
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
KSIH G+ N ++LID Y C +++ V D M + VVS S
Sbjct: 339 KFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCS 398
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
+MI G A H +R PN +T I +L+ACS + + I R
Sbjct: 399 TMISGLA-HAGRSDEAISIFCHMRD--TPNAITVISLLNACSVSADLRTSKWAHGIAIRR 455
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH----KNIK 406
+ + +VD ++ G +E AR ++ N + W ++ ++ K +
Sbjct: 456 SLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNIISWTVIISAYAINGLPDKALA 514
Query: 407 LAEE---------AMRHLSELDPLNDG 424
L +E A+ +L+ L N G
Sbjct: 515 LFDEMKQKGYTPNAVTYLAALSACNHG 541
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 9/244 (3%)
Query: 158 NIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR 217
N + + GD+ + FD M R+ SW ++ GL G EE L FS++ G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 218 PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRV 277
PN T+V V+ AC L G+ IH + +GF V N+++ MY L ++
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSAR-KL 181
Query: 278 FDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGL 336
FD M ER V+SWS +I + M+ + +P+ VT VL AC+ +
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 337 VDKGREF--FTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGA 394
+D GR F+I RR + + V L+D+ S+ ++ A V + + N V W +
Sbjct: 242 IDVGRSVHGFSI-RRGFDLAD-VFVCNSLIDMYSKGFDVDSAFRVF-DETTCRNIVSWNS 298
Query: 395 LLGG 398
+L G
Sbjct: 299 ILAG 302
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 220/437 (50%), Gaps = 37/437 (8%)
Query: 49 HVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSI-LPDHFTCSFLLKACTISSDIVTG 107
H P +V WNS + +E G + ++ RL ++S PD +T S + A V G
Sbjct: 362 HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHG 421
Query: 108 RIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA 167
+++H V KLG++ ++ + LL +Y E
Sbjct: 422 KLLHGQVTKLGYERSVFVGTTLLSMYFKNREAE--------------------------- 454
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
+A+ +FD M R+V WT +I G ++ G SE A++ F EM RE +R + ++ +V+
Sbjct: 455 ----SAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVI 510
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
AC+ + L G+ H A GF + VC AL+DMY K G E +F +
Sbjct: 511 GACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLK 570
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
W+SM+ ++ H ++ +G P+ VT++ +L ACSH G +G+ + M
Sbjct: 571 CWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM 630
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGV--VWGALLGGCRLHKNI 405
++ GI G +HY C+V+L+S+AG ++EA E+I S P N +W LL C +N+
Sbjct: 631 -KEQGIKAGFKHYSCMVNLVSKAGLVDEALELI-EQSPPGNNQAELWRTLLSACVNTRNL 688
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
++ A + +LDP + ++++SN+YA G+WE+V+ +RR ++ K PG S I +
Sbjct: 689 QIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEV 748
Query: 466 -DGVVHEFVAGDETHPQ 481
+ F +GD+++P+
Sbjct: 749 NNNNTQVFSSGDQSNPE 765
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 7/245 (2%)
Query: 158 NIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKC-GMSEEALRVFSEMEREGS 216
N +I + G + AR +FD MP RNV S+ ++ S ++ + A + + M E
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 217 RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCR 276
+PN T +++ CA L D+ G S++ G+ NV V +++ MY CG LE R
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 277 VFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGL 336
+FD + R V+W++MIVG + M+ SG+ P T+ VL+ CS +G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 337 VDKGREFFT--IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGA 394
G+ I+ +P L+D+ G + EA V + PN V W +
Sbjct: 316 YSLGKLIHARIIVSDSLADLP---LDNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNS 371
Query: 395 LLGGC 399
++ GC
Sbjct: 372 IISGC 376
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 41/307 (13%)
Query: 28 LKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPD 87
L+QAR + K + H ++ A+ S FA P T F ++ P+
Sbjct: 148 LEQARKVFDK----MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK-----PN 198
Query: 88 HFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFD 147
T + L++ C + D++ G +++ + KLG+ N+++Q +L +Y+SCG
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCG---------- 248
Query: 148 KMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRV 207
D+ +AR +FD + R+ +W ++I G K E+ L
Sbjct: 249 ---------------------DLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMF 287
Query: 208 FSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVK 267
F M G P + T VL C++LG GK IH + L ++ + NAL+DMY
Sbjct: 288 FRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCS 347
Query: 268 CGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-SGMKPNHVTFIG 326
CG + E VF + +VSW+S+I G + + ++R S +P+ TF
Sbjct: 348 CGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSA 407
Query: 327 VLHACSH 333
+ A +
Sbjct: 408 AISATAE 414
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 20/288 (6%)
Query: 158 NIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR 217
N +I + + AR +FD MP+RN+ + + + M + S++ + GS
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSS---LHSQIIKLGSF 82
Query: 218 P-------NEV--TVVAVLVACAQLGDLEFGKSIHRF---AEGNGFLRNVYVCNALIDMY 265
NE+ +VV + C + L+ + IH A + Y N LI MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 266 VKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMH-XXXXXXXXXXXXMIRSGMKPNHVTF 324
V+CG LE+ +VFD M R VVS++++ ++ + M +KPN TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 384
++ C+ + V G + + + G V ++ + S G LE AR + ++
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIK-LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 385 VPPNGVVWGALLGGCRLHKNIKLAEEAMRH--LSELDPLNDGYYVVMS 430
+ V W ++ G + I+ R+ +S +DP Y +V++
Sbjct: 262 -NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 199/414 (48%), Gaps = 39/414 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN+ + + + +S++ R+ + + PD FT LL A ++ D++ ++ A
Sbjct: 354 LVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL-ATSLDLDVL--EMVQA 410
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K G S + + N L+ Y+ G+ A L+F+
Sbjct: 411 CIIKFGLSSKIEISNALISAYSKNGQIEKADLLFE------------------------- 445
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR--PNEVTVVAVLVAC 230
R L R+N+ SW ++ISG G E L FS + R P+ T+ +L C
Sbjct: 446 -RSL-----RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
L G H + +G + + NALI+MY +CG ++ VF+ M E+ VVSW+
Sbjct: 500 VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWN 559
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
S+I ++ H M G + P+ TF VL ACSH GLV++G E F M
Sbjct: 560 SLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVE 619
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREV--IANMSVPPNGVVWGALLGGCRLHKNIKL 407
+G++ V+H+ CLVDLL RAG L+EA + I+ ++ VW AL C H ++KL
Sbjct: 620 FHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKL 679
Query: 408 AEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
+ + L E + + YV +SN+YA AG W+E RR++ G K GCS
Sbjct: 680 GKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 133/286 (46%), Gaps = 6/286 (2%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSIL-PDHFTCSFLLKACTISSDIVTGRI 109
++ N L G + + LF + + + L PD ++ S + D + G
Sbjct: 19 TTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQ 78
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+H Y + G + + N LL LY G + + FD++ + DV +W ++ GD
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 170 VGAARDLFDSMPRR-NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
+ A ++FD MP R +V W ++I+G + G E ++ +F EM + G R ++ +L
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFD--GMRERTV 286
C G L+FGK +H GF V NALI MY C + + C VF+ + R
Sbjct: 199 MC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
V+++ +I G A M+ + ++P +TF+ V+ +CS
Sbjct: 258 VTFNVVIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS 302
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 166/385 (43%), Gaps = 47/385 (12%)
Query: 71 DTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLL 130
+++ +F ++ + S+ P T ++ +C+ ++ G +H K G++ ++ N +
Sbjct: 274 ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATM 330
Query: 131 HLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTS 190
+Y+S F+ D GAA +F+S+ +++ +W +
Sbjct: 331 TMYSS----------FE---------------------DFGAAHKVFESLEEKDLVTWNT 359
Query: 191 VISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKS-IHRFAEGN 249
+IS + + + A+ V+ M G +P+E T ++L L LE ++ I +F
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKF---- 415
Query: 250 GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 309
G + + NALI Y K G +E+ +F+ + ++SW+++I GF +
Sbjct: 416 GLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF 475
Query: 310 XXMIRSGMK--PNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLL 367
++ S ++ P+ T +L C + G + + R +G L+++
Sbjct: 476 SCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKETLIGNALINMY 534
Query: 368 SRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLH---KNIKLAEEAMRHLSELDPLNDG 424
S+ G ++ + EV MS + V W +L+ H +N + M+ ++ P
Sbjct: 535 SQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAAT 593
Query: 425 YYVVMSNVYAEAGKWEEVSRIRRSM 449
+ V+S + AG EE I SM
Sbjct: 594 FSAVLSAC-SHAGLVEEGLEIFNSM 617
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 229/502 (45%), Gaps = 45/502 (8%)
Query: 2 LCLCSTLPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHV----DLAHVPAIVPWN 57
+ LC L + K H N L + KT+ L D P ++ WN
Sbjct: 71 VSLCRQLHGYVTK-----HGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWN 125
Query: 58 SCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKL 117
S + + + G + I LFL L + + P+ F+ + L AC G IH+ + KL
Sbjct: 126 SLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKL 185
Query: 118 GFQS-NLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNI----------------- 159
G + N+++ N L+ +Y CG A L+F M ++D +WN
Sbjct: 186 GLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWF 245
Query: 160 --------------MIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEAL 205
+I + +GD A + MP N SW ++++G S EA
Sbjct: 246 FHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEAT 305
Query: 206 RVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMY 265
F++M G R +E ++ VL A A L + +G IH A G V V +ALIDMY
Sbjct: 306 EFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMY 365
Query: 266 VKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG-MKPNHVTF 324
KCG L+ +F M + ++ W+ MI G+A + + + +KP+ TF
Sbjct: 366 SKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTF 425
Query: 325 IGVLHACSHVGL-VDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 383
+ +L CSH + ++ +F +M +Y I P VEH L+ + + G + +A++VI
Sbjct: 426 LNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEF 485
Query: 384 SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL-DPLNDGY-YVVMSNVYAEAGKWEE 441
+GV W ALLG C K++K A+ + EL D D Y Y+VMSN+YA +W E
Sbjct: 486 GFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWRE 545
Query: 442 VSRIRRSMKSRGVKKTPGCSSI 463
V +IR+ M+ GV K G S I
Sbjct: 546 VGQIRKIMRESGVLKEVGSSWI 567
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 133/295 (45%), Gaps = 15/295 (5%)
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA 246
SW++++ LA+ G S LR E+ +G +P+ +V +L G + + +H +
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 247 EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXX 306
+GF+ N + N+L+ Y LE+ +VFD M + V+SW+S++ G+
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 307 XXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG-CLVD 365
+ RS + PN +F L AC+ + L G + + + G+ G G CL+D
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK-LGLEKGNVVVGNCLID 200
Query: 366 LLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY 425
+ + G +++A V +M + V W A++ C + ++L + D +
Sbjct: 201 MYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVT--- 256
Query: 426 YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSS--ITIDGVVHEFVAGDET 478
Y + + + ++G + ++ M + P SS + G V+ +G+ T
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDMPN------PNSSSWNTILTGYVNSEKSGEAT 305
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 189/376 (50%), Gaps = 34/376 (9%)
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLIS 166
G +H YV + G+ + N L+ +YA CG + ++F++M ++D+
Sbjct: 365 GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLV----------- 413
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME-REGSRPNEVTVVA 225
SW ++ISG A+ +AL +F EM+ + + + TVV+
Sbjct: 414 --------------------SWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVS 453
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCN-ALIDMYVKCGCLEEGCRVFDGMRER 284
+L AC+ G L GK IH F+R + + AL+DMY KCG LE R FD + +
Sbjct: 454 LLQACSSAGALPVGKLIHCIVI-RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK 512
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
VVSW +I G+ H + SGM+PNHV F+ VL +CSH G+V +G + F
Sbjct: 513 DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIF 572
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKN 404
+ M RD+G+ P EH C+VDLL RA R+E+A + P+ V G +L CR +
Sbjct: 573 SSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGK 632
Query: 405 IKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSIT 464
++ + + EL P + G+YV + + +A +W++VS M+S G+KK PG S I
Sbjct: 633 TEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIE 692
Query: 465 IDGVVHEFVAGDETHP 480
++G F +H
Sbjct: 693 MNGKTTTFFMNHTSHS 708
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 180/382 (47%), Gaps = 36/382 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN+ + +A G + + L R+R + PD T L D+ GR++H
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ K GF ++ L+ L+ +Y CG+ + + + +P +DV W +M
Sbjct: 270 QIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM------------ 317
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
ISGL + G +E+AL VFSEM + GS + + +V+ +CAQ
Sbjct: 318 -------------------ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQ 358
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
LG + G S+H + +G+ + N+LI MY KCG L++ +F+ M ER +VSW+++
Sbjct: 359 LGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAI 418
Query: 293 IVGFAMHXXXXXXXXXXXXM-IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
I G+A + M ++ + + T + +L ACS G + G+ I+ R +
Sbjct: 419 ISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF 478
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
I P LVD+ S+ G LE A+ ++S + V WG L+ G H +A E
Sbjct: 479 -IRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS-WKDVVSWGILIAGYGFHGKGDIALEI 536
Query: 412 MRHL--SELDPLNDGYYVVMSN 431
S ++P + + V+S+
Sbjct: 537 YSEFLHSGMEPNHVIFLAVLSS 558
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 149/346 (43%), Gaps = 36/346 (10%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W + + ++ G + SL +R I P T LL+ + +I + +H
Sbjct: 112 VVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQCLHD 168
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ GF ++ + N +L+LY C VG
Sbjct: 169 FAVIYGFDCDIAVMNSMLNLYCKCDH-------------------------------VGD 197
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
A+DLFD M +R++ SW ++ISG A G E L++ M +G RP++ T A L
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ DLE G+ +H GF ++++ ALI MY+KCG E RV + + + VV W+ M
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G M++SG + V+ +C+ +G D G + R +G
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR-HG 376
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
L+ + ++ G L+++ + M+ + V W A++ G
Sbjct: 377 YTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 43/365 (11%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
+NS + + G +S F + +LPD FT LLKAC + G IH V
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
GF S+ + + L++LYA G +HAR +F++M +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE------------------------ 109
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
R+V WT++I ++ G+ EA + +EM +G +P VT++ +L ++
Sbjct: 110 -------RDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
L+ +H FA GF ++ V N+++++Y KC + + +FD M +R +VSW++MI G
Sbjct: 163 LQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 296 FAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVP 355
+A M G++P+ TF L + ++ GR + + G
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT-GFDV 278
Query: 356 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGGC-RLHKNIKLAEEAMR 413
+ L+ + + G+ E + V+ ++P VV W ++ G RL + AE+A+
Sbjct: 279 DMHLKTALITMYLKCGKEEASYRVLE--TIPNKDVVCWTVMISGLMRLGR----AEKALI 332
Query: 414 HLSEL 418
SE+
Sbjct: 333 VFSEM 337
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 5/215 (2%)
Query: 184 NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIH 243
+ + + S I+ L+ G ++ L FS M P+ T ++L ACA L L FG SIH
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH 69
Query: 244 RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXX 303
+ NGF + Y+ ++L+++Y K G L +VF+ MRER VV W++MI ++
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 304 XXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCL 363
M G+KP VT + +L + + +F I YG + +
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVI----YGFDCDIAVMNSM 185
Query: 364 VDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
++L + + +A+++ M + V W ++ G
Sbjct: 186 LNLYCKCDHVGDAKDLFDQME-QRDMVSWNTMISG 219
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 202/414 (48%), Gaps = 47/414 (11%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V +N+ + + + G ++ ++ + PD T +L+ C SD G ++
Sbjct: 468 VAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP-QQDVATWNIMI-GHLISAGDVG 171
+ K GF S + + L++++ C + A ++FDK ++ +WNIM+ G+L+
Sbjct: 528 IIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLH----- 582
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
G +EEA+ F +M+ E +PN VT V ++ A A
Sbjct: 583 ---------------------------GQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+L L G S+H GF V N+L+DMY KCG +E + F + + +VSW++
Sbjct: 616 ELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNT 675
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
M+ +A H M + +KP+ V+F+ VL AC H GLV++G+ F M +
Sbjct: 676 MLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERH 735
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
I VEHY C+VDLL +AG EA E++ M V + VWGALL R+H N+ L+ A
Sbjct: 736 KIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAA 795
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
+ L +L+PLN + Y++ + EV+ + R +KK P CS I +
Sbjct: 796 LCQLVKLEPLNPSH-------YSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 179/443 (40%), Gaps = 71/443 (16%)
Query: 25 NHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRL-RQLS 83
++ L A +L + + D P +V WNS ++ + G + + F + +
Sbjct: 36 HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKG 95
Query: 84 ILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNL-------------------- 123
I PD ++ +F LKAC S D G IH + ++G +S++
Sbjct: 96 IDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSAR 155
Query: 124 -----------ILQNMLLHLYASCGETSHARLMFDKMPQ-----QDVATWNI-------- 159
+ N ++ A G +S A L+F M V+ +N+
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 160 ------------------------MIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGL 195
+I + D+ AA +F+ + R++ SW ++++
Sbjct: 216 KSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAY 275
Query: 196 AKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNV 255
A G EE L +F M R N+V + L A A +GDL G +IH +A G + +V
Sbjct: 276 AHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDV 335
Query: 256 YVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRS 315
V +L+ MY KCG LE ++F + +R VVSWS+MI + M+R
Sbjct: 336 SVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRI 395
Query: 316 GMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 375
+KPN VT VL C+ V G+ + I +E ++ + ++ GR
Sbjct: 396 HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKCGRFSP 454
Query: 376 AREVIANMSVPPNGVVWGALLGG 398
A + + + + V + AL G
Sbjct: 455 ALKAFERLPI-KDAVAFNALAQG 476
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 167/403 (41%), Gaps = 37/403 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W++ + + + G + ISLF + ++ I P+ T + +L+ C + G+ IH
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHC 425
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
Y K +S L ++ +YA CG S A F+++P +D +N
Sbjct: 426 YAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFN-------------- 471
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
++ G + G + +A V+ M+ G P+ T+V +L CA
Sbjct: 472 -----------------ALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAF 514
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR-ERTVVSWSS 291
D G ++ +GF +V +ALI+M+ KC L +FD E++ VSW+
Sbjct: 515 CSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNI 574
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
M+ G+ +H M +PN VTF+ ++ A + + + G + + +
Sbjct: 575 MMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ-C 633
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G LVD+ ++ G +E + + +S V W +L H A
Sbjct: 634 GFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS-NKYIVSWNTMLSAYAAHGLASCAVSL 692
Query: 412 MRHL--SELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
+ +EL P + + V+S AG EE RI M R
Sbjct: 693 FLSMQENELKPDSVSFLSVLSAC-RHAGLVEEGKRIFEEMGER 734
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 151/365 (41%), Gaps = 37/365 (10%)
Query: 55 PWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYV 114
W + + +A G + + LF +R + + + L+A D+V G IH Y
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 115 QKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAAR 174
+ G ++ + L+ +Y+ CGE + A
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGE-------------------------------LEIAE 355
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
LF ++ R+V SW+++I+ + G +EA+ +F +M R +PN VT+ +VL CA +
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
GKSIH +A + A+I MY KCG + F+ + + V+++++
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF-TIMRRDYGI 353
G+ M G+ P+ T +G+L C+ +G + I++ +
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
V H L+++ ++ L A + + V W ++ G LH AEEA+
Sbjct: 536 ECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ---AEEAVA 590
Query: 414 HLSEL 418
++
Sbjct: 591 TFRQM 595
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 167/297 (56%), Gaps = 2/297 (0%)
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
G+V +R LF++ R+V W+S+ISG A+ G E + + ++M +EG N VT++A++
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIV 360
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
AC L F ++H GF+ ++ + NALIDMY KCG L VF + E+ +V
Sbjct: 361 SACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV 420
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
SWSSMI + +H MI+ G + + + F+ +L AC+H GLV++ + FT
Sbjct: 421 SWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQA 480
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
+ Y + +EHY C ++LL R G++++A EV NM + P+ +W +LL C H + +
Sbjct: 481 GK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 408 AEEAM-RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSI 463
A + + L + +P N YV++S ++ E+G + +RR M+ R + K G S I
Sbjct: 540 AGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKI 596
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 3/263 (1%)
Query: 141 HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGM 200
HA ++ D+ Q+ V ++ + D AA +FD M +N SWT++ISG
Sbjct: 172 HALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQN 231
Query: 201 SEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG-DLEFGKSIHRFAEGNGFLRNVYVCN 259
E + +F M+RE RPN VT+++VL AC +L K IH F+ +G + +
Sbjct: 232 YEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTA 291
Query: 260 ALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
A + MY +CG + +F+ + R VV WSSMI G+A M + G++
Sbjct: 292 AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEA 351
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
N VT + ++ AC++ L+ + + + G + + L+D+ ++ G L AREV
Sbjct: 352 NSVTLLAIVSACTNSTLLSFASTVHSQILK-CGFMSHILLGNALIDMYAKCGSLSAAREV 410
Query: 380 IANMSVPPNGVVWGALLGGCRLH 402
++ + V W +++ LH
Sbjct: 411 FYELT-EKDLVSWSSMINAYGLH 432
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 95/178 (53%), Gaps = 6/178 (3%)
Query: 39 NAPLSHV--DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLK 96
N LS V + + V +V W+S + +AE G + ++L ++R+ I + T ++
Sbjct: 302 NVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVS 361
Query: 97 ACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVAT 156
ACT S+ + +H+ + K GF S+++L N L+ +YA CG S AR +F ++ ++D+ +
Sbjct: 362 ACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVS 421
Query: 157 WNIMIGHLISAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSE 210
W+ MI G A ++F M + + ++ +++S G+ EEA +F++
Sbjct: 422 WSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ 479
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 184/376 (48%), Gaps = 37/376 (9%)
Query: 87 DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMF 146
D+FT S LL AC I G+ IHA + K+ +Q ++ + LL++YA S AR
Sbjct: 244 DYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAR--- 296
Query: 147 DKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALR 206
+ F+SM RNV SW ++I G A+ G EA+R
Sbjct: 297 ----------------------------ECFESMVVRNVVSWNAMIVGFAQNGEGREAMR 328
Query: 207 VFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYV 266
+F +M E +P+E+T +VL +CA+ + K + G + V N+LI Y
Sbjct: 329 LFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYS 388
Query: 267 KCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIG 326
+ G L E F +RE +VSW+S+I A H M++ ++P+ +TF+
Sbjct: 389 RNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLE 447
Query: 327 VLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP 386
VL ACSH GLV +G F M Y I EHY CL+DLL RAG ++EA +V+ +M
Sbjct: 448 VLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTE 507
Query: 387 PNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIR 446
P+ A GGC +H+ + + + L E++P Y ++SN Y G W + + +R
Sbjct: 508 PSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLR 567
Query: 447 RSMKSRGVK-KTPGCS 461
+ + KTPGCS
Sbjct: 568 KRERRNCYNPKTPGCS 583
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 151/350 (43%), Gaps = 46/350 (13%)
Query: 87 DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMF 146
DH + L++ CT S+++ G +H + K G +S+ L+H Y CG AR +F
Sbjct: 141 DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVF 200
Query: 147 DKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALR 206
+ + +D+ WN +++S GM +EA
Sbjct: 201 EAVLDRDLVLWN-------------------------------ALVSSYVLNGMIDEAFG 229
Query: 207 VFSEM--EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
+ M ++ R + T ++L AC +E GK IH + ++ V AL++M
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 265 YVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
Y K L + F+ M R VVSW++MIVGFA + M+ ++P+ +TF
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 384
VL +C+ + + ++ ++ + G + L+ SR G L EA ++
Sbjct: 346 ASVLSSCAKFSAIWEIKQVQAMVTKK-GSADFLSVANSLISSYSRNGNLSEALLCFHSIR 404
Query: 385 VPPNGVVWGALLGGCRLHKNIKLAEEAMR----HLSELDPLNDGYYVVMS 430
P+ V W +++G H AEE+++ L +L P + V+S
Sbjct: 405 -EPDLVSWTSVIGALASH---GFAEESLQMFESMLQKLQPDKITFLEVLS 450
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 150/361 (41%), Gaps = 65/361 (18%)
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H ++ K G ++L LQN LL Y E FD
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIRE-------FDD---------------------- 89
Query: 171 GAARDLFDSMPRRNVRSWTSVISGL----------AKCGMSEEALRVFSEMEREGSRPNE 220
A LFD MP RN+ +W +I G+ A G + +F+++ +
Sbjct: 90 --ADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLD-----H 142
Query: 221 VTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG 280
V+ + ++ C +++ G +H G + + +L+ Y KCG + E RVF+
Sbjct: 143 VSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEA 202
Query: 281 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM--IRSGMKPNHVTFIGVLHACSHVGLVD 338
+ +R +V W++++ + ++ M ++ + ++ TF +L AC ++
Sbjct: 203 VLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IE 258
Query: 339 KGREFFTIMRR-DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLG 397
+G++ I+ + Y V L+++ +++ L +ARE +M V N V W A++
Sbjct: 259 QGKQIHAILFKVSYQFDIPVA--TALLNMYAKSNHLSDARECFESM-VVRNVVSWNAMIV 315
Query: 398 GCRLHKNIKLAEEAMR-----HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
G + EAMR L L P + V+S+ + W E+ +++ + +
Sbjct: 316 GFAQNGE---GREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW-EIKQVQAMVTKK 371
Query: 453 G 453
G
Sbjct: 372 G 372
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 12 IPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCD 71
IP T L + ++++HL AR + V +V WN+ + FA+ G +
Sbjct: 276 IPVATALLNMYAKSNHLSDARECF----------ESMVVRNVVSWNAMIVGFAQNGEGRE 325
Query: 72 TISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLH 131
+ LF ++ ++ PD T + +L +C S I + + A V K G L + N L+
Sbjct: 326 AMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLIS 385
Query: 132 LYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRR---NVRSW 188
Y+ G S A L F + + D+ +W +IG L S G + +F+SM ++ + ++
Sbjct: 386 SYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITF 445
Query: 189 TSVISGLAKCGMSEEALRVFSEM 211
V+S + G+ +E LR F M
Sbjct: 446 LEVLSACSHGGLVQEGLRCFKRM 468
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 186/366 (50%), Gaps = 13/366 (3%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
IV WN+ L +A + P +SLFL++ Q+ P +T S LK+C ++ + +H+
Sbjct: 382 IVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHS 436
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFD-KMPQQDVATWNIMIGHLISAGDVG 171
+ ++G++ N + + L+ YA + A L+ D V NI+ G G
Sbjct: 437 VIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
+ L ++ + + SW I+ ++ EE + +F M + RP++ T V++L C+
Sbjct: 497 ESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS 556
Query: 232 QLGDLEFGKSIHRFAEGNGF-LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+L DL G SIH F + +VCN LIDMY KCG + +VF+ RE+ +++W+
Sbjct: 557 KLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWT 616
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
++I +H + G KP+ V+FI +L AC H G+V +G F M +D
Sbjct: 617 ALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KD 675
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEE 410
YG+ P ++HY C VDLL+R G L+EA +I M P + VW L GC + AEE
Sbjct: 676 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN-----RFAEE 730
Query: 411 AMRHLS 416
L+
Sbjct: 731 QRNTLN 736
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 158/404 (39%), Gaps = 60/404 (14%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
++ WN + RG + + F L ++ + +LK + D+ + +H
Sbjct: 179 SLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLH 238
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
K G + + N L+ Y CG T A MF QD +W+I+
Sbjct: 239 CSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF-----QDAGSWDIV----------- 282
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
SW ++I AK +AL++F M G PN+ T V+VL +
Sbjct: 283 ---------------SWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSS 327
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+ L G+ IH NG + + NALID Y KCG LE+ FD +R++ +V W++
Sbjct: 328 LVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNA 387
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS------------HVGLVDK 339
++ G+A + M++ G +P TF L +C +G D
Sbjct: 388 LLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDN 446
Query: 340 GREFFTIMRR--------------DYGIVP-GVEHYGCLVDLLSRAGRLEEAREVIANMS 384
++MR D+ P V + + SR G+ E+ ++I+ +
Sbjct: 447 DYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE 506
Query: 385 VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVV 428
P+ V W + C + E +H+ + + D Y V
Sbjct: 507 -QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFV 549
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 147/346 (42%), Gaps = 36/346 (10%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
V +N+ +K +++ G +F +R LP+ T S LL ++ D+ G +H
Sbjct: 81 VSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAGTQLHGL 138
Query: 114 VQKLG-FQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
K G F ++ + LL LY RL +M +Q
Sbjct: 139 SLKYGLFMADAFVGTCLLCLYG--------RLDLLEMAEQ-------------------- 170
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
+F+ MP +++ +W ++S L G +E + F E+ R G+ E + + VL +
Sbjct: 171 ---VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ DL+ K +H A G + V N+LI Y KCG R+F +VSW+++
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I A M G PN T++ VL S V L+ GR+ ++ ++ G
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-G 346
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
G+ L+D ++ G LE++R + N V W ALL G
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIR-DKNIVCWNALLSG 391
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 154/369 (41%), Gaps = 16/369 (4%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
IV WN+ + A+ P + LF+ + + P+ T +L ++ + GR IH
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMI-GHLISAGDVG 171
+ K G ++ ++L N L+ YA CG +RL FD + +++ WN ++ G+ G +
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI- 399
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
LF M + R S K E ++ S + R G N+ + +++ + A
Sbjct: 400 -CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 232 QLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSS 291
+ + + +A G +V N + +Y + G E ++ + + VSW+
Sbjct: 459 KNQLMNDALLLLDWASGP---TSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNI 515
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF-TIMRRD 350
I + M++S ++P+ TF+ +L CS + + G I + D
Sbjct: 516 AIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD 575
Query: 351 YGIVPGVEHYGC--LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
+ + + C L+D+ + G + +V + N + W AL+ +H
Sbjct: 576 FSC---ADTFVCNVLIDMYGKCGSIRSVMKVFEE-TREKNLITWTALISCLGIH---GYG 628
Query: 409 EEAMRHLSE 417
+EA+ E
Sbjct: 629 QEALEKFKE 637
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 152 QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEM 211
Q V N +I G+V A +FD MP RN S+ ++I G +K G ++A VFSEM
Sbjct: 47 QPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM 106
Query: 212 EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNG-FLRNVYVCNALIDMYVKCGC 270
G PN+ TV L++CA L D+ G +H + G F+ + +V L+ +Y +
Sbjct: 107 RYFGYLPNQSTVSG-LLSCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164
Query: 271 LEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
LE +VF+ M +++ +W+ M+ ++R G +F+GVL
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 331 CSHVGLVDKGREF 343
S V +D ++
Sbjct: 225 VSCVKDLDISKQL 237
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 32/225 (14%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P V WN + + + I LF + Q +I PD +T +L C+ D+ G I
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI 567
Query: 111 HAYVQKLGFQ-SNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
H + K F ++ + N+L+ +Y CG +F++ ++++ T
Sbjct: 568 HGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLIT------------- 614
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
WT++IS L G +EAL F E G +P+ V+ +++L A
Sbjct: 615 ------------------WTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTA 656
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEG 274
C G ++ G + + + G + +D+ + G L+E
Sbjct: 657 CRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEA 701
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEG--NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG 280
VV++L C + K++H + + L+ VYVCN +I +Y K G + +VFD
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 281 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKG 340
M ER VS++++I G++ + M G PN T G+L +C+ + V G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLD-VRAG 132
Query: 341 REFFTIMRRDYGIVPGVEHYG-CLVDLLSRAGRLEEAREVIANM 383
+ + + YG+ G CL+ L R LE A +V +M
Sbjct: 133 TQLHGLSLK-YGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM 175
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 176/326 (53%), Gaps = 8/326 (2%)
Query: 44 HVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSD 103
+ D ++V WN+ L +A+ G D + LF + +L + P+ T ++ AC+ +D
Sbjct: 220 YFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRAD 279
Query: 104 IVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM-PQQDVATWNIMIG 162
R + + + + N ++ LL ++A C + AR +F+++ Q+++ TWN MI
Sbjct: 280 PSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMIS 339
Query: 163 HLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREG-SRPNEV 221
GD+ +AR LFD+MP+RNV SW S+I+G A G + A+ F +M G S+P+EV
Sbjct: 340 GYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEV 399
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
T+++VL AC + DLE G I + N N +LI MY + G L E RVFD M
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Query: 282 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGR 341
+ER VVS++++ FA + M G++P+ VT+ VL AC+ GL+ +G+
Sbjct: 460 KERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQ 519
Query: 342 EFFTIMRRDYGIVPGVEHYGCLVDLL 367
F +R P +HY C+ DLL
Sbjct: 520 RIFKSIRN-----PLADHYACM-DLL 539
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 179/402 (44%), Gaps = 70/402 (17%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D P + NS K+F++ D + L+ + + I+PD F+ ++K+
Sbjct: 64 DSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----R 118
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDK----------------- 148
G + A V+KLGF + ++N+++ +Y AR +FD+
Sbjct: 119 FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 149 --------------MPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISG 194
MP+ DV +W +MI D+ AR FD MP ++V SW +++SG
Sbjct: 179 KWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 195 LAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRN 254
A+ G +E+ALR+F++M R G RPNE T V V+ AC+ D +S+ + + N
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 255 VYVCNALIDMYVKCGCLEEGCRV--------------------------------FDGMR 282
+V AL+DM+ KC ++ R+ FD M
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 283 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG-MKPNHVTFIGVLHACSHVGLVDKGR 341
+R VVSW+S+I G+A + MI G KP+ VT I VL AC H+ ++ G
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 342 EFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 383
+R++ I Y L+ + +R G L EA+ V M
Sbjct: 419 CIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 122/331 (36%), Gaps = 89/331 (26%)
Query: 141 HARLM-FDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCG 199
HA+L+ F+ +P+Q I+ R +FDS+ NV S+ +K
Sbjct: 26 HAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMD 85
Query: 200 MSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCN 259
M+ + LR++ + R G P+ + V+ + + G L E GF ++ YV N
Sbjct: 86 MANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL-----FQALVEKLGFFKDPYVRN 140
Query: 260 ALIDMYV-------------------------------KCGCLEEGCRVFDGMRERTVVS 288
++DMYV K G EE C++FD M E VVS
Sbjct: 141 VIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVS 200
Query: 289 WSSMIVGF-------------------------------AMHXXXXXXXXXXXXMIRSGM 317
W+ MI GF A + M+R G+
Sbjct: 201 WTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGV 260
Query: 318 KPNHVTFIGVLHACSH----------VGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLL 367
+PN T++ V+ ACS V L+D+ R + L+D+
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVK-----------TALLDMH 309
Query: 368 SRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
++ ++ AR + + N V W A++ G
Sbjct: 310 AKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 190/383 (49%), Gaps = 29/383 (7%)
Query: 210 EMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCG 269
E+ +G+ P+ V + +CA L LE K +H + F + + N +I M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 270 CLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLH 329
+ + RVFD M ++ + SW M+ ++ + M + G+KPN TF+ V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 330 ACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNG 389
AC+ VG +++ F M+ ++GI P EHY ++ +L + G L EA + I ++ P
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 390 VVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSM 449
W A+ RLH +I L + + ++DP V++ + K
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK----AVINKIPTPPPK----------- 450
Query: 450 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 509
K+T + +T + EF + ++ K + K Y+PDT VL
Sbjct: 451 ---SFKET---NMVTSKSRILEF--------RNLTFYKDEAKEMAAKKGVVYVPDTRFVL 496
Query: 510 LDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENRE 569
D++ E KE L HSE+LA+ YG+I T P + I+KNLRVC DCH +K++S+I R
Sbjct: 497 HDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRV 556
Query: 570 IVVRDRNRFHCFKNGACTCKDYW 592
++VRD RFH FK+G C+C DYW
Sbjct: 557 LIVRDNKRFHHFKDGKCSCGDYW 579
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 31/153 (20%)
Query: 85 LPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARL 144
+PD L ++C + + +H + + F+ + L NM++ ++ C + A+
Sbjct: 233 MPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKR 292
Query: 145 MFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEA 204
+FD M +D+ +W++M + + GM ++A
Sbjct: 293 VFDHMVDKDMDSWHLM-------------------------------MCAYSDNGMGDDA 321
Query: 205 LRVFSEMEREGSRPNEVTVVAVLVACAQLGDLE 237
L +F EM + G +PNE T + V +ACA +G +E
Sbjct: 322 LHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 36/414 (8%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN+ + + + SLF + PD FT LL+A + + +H
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
KLGF + L L++ Y CG ++A W
Sbjct: 239 LAIKLGFGRSSALIRSLVNAYVKCGSLANA--------------WK-------------- 270
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAK-CGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
L + +R++ S T++I+G ++ + +A +F +M R ++ +EV V ++L C
Sbjct: 271 ---LHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICT 327
Query: 232 QLGDLEFGKSIHRFAEGNGFLR-NVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+ + G+ IH FA + +R +V + N+LIDMY K G +E+ F+ M+E+ V SW+
Sbjct: 328 TIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWT 387
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S+I G+ H M +KPN VTF+ +L ACSH G + G + + M
Sbjct: 388 SLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINK 447
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS--VPPNGVVWGALLGGCRLHKNIKLA 408
+GI EH C++D+L+R+G LEEA +I + V + WGA L CR H N++L+
Sbjct: 448 HGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLS 507
Query: 409 EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRG-VKKTPGCS 461
+ A L ++P Y+ +++VYA G W+ R+ MK G K PG S
Sbjct: 508 KVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 158/358 (44%), Gaps = 35/358 (9%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V W + + F+ G D + LF + + + + FT +LK+C + G IH
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG 137
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
V+K NLI+++ LL LYA CG+ ARL FD M ++D+ +WN M
Sbjct: 138 SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAM------------ 185
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
I G ++ + +F M EG +P+ T ++L A
Sbjct: 186 -------------------IDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIV 226
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ LE +H A GF R+ + +L++ YVKCG L ++ +G ++R ++S +++
Sbjct: 227 VKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTAL 286
Query: 293 IVGFAMHXX-XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
I GF+ MIR K + V +L C+ + V GR+ +
Sbjct: 287 ITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSS 346
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGV-VWGALLGGCRLHKNIKLA 408
I V L+D+ +++G +E+A V+A + V W +L+ G H N + A
Sbjct: 347 QIRFDVALGNSLIDMYAKSGEIEDA--VLAFEEMKEKDVRSWTSLIAGYGRHGNFEKA 402
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 115/236 (48%), Gaps = 31/236 (13%)
Query: 95 LKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDV 154
LK C+ + +IH GF SNL L++ML+ LY
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLY--------------------- 57
Query: 155 ATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMERE 214
+ GDV AR LFD + +R+V SWT++IS ++CG +AL +F EM RE
Sbjct: 58 ----------LKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRE 107
Query: 215 GSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEG 274
+ N+ T +VL +C LG L+ G IH E N+ V +AL+ +Y +CG +EE
Sbjct: 108 DVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEA 167
Query: 275 CRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
FD M+ER +VSW++MI G+ + M+ G KP+ TF +L A
Sbjct: 168 RLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXX 301
IH + NGF N+ + + LID+Y+K G ++ ++FD + +R VVSW++MI F+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
M R +K N T+ VL +C +G + +G + I VE
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ----------IHGSVEKGN 143
Query: 362 C---------LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
C L+ L +R G++EEAR +M + V W A++ G
Sbjct: 144 CAGNLIVRSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDG 188
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 197/401 (49%), Gaps = 16/401 (3%)
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
+ + + G ++A+ + EG + + + C L+ K +H F +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 252 LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 311
+ ++ N++I+MY CG +E+ VF+ M ER + +W +I FA +
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 312 MIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAG 371
+ G KP+ F + AC +G +++G F M ++YGI+P +EHY LV +L+ G
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPG 332
Query: 372 RLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSN 431
L+EA + +M PN +W L+ R+H ++ L + + +LD N
Sbjct: 333 YLDEALRFVESME--PNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD-------ASRLN 383
Query: 432 VYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEK 491
++AG S K + + K P + AGD + P+ + ++ +
Sbjct: 384 KESKAGLVPVKSSDLVKEKLQRMAKGPNYG-------IRYMAAGDISRPENRELYMALKS 436
Query: 492 LLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRV 551
L M GY+P + + L D++ E K+ L+ H+E+ A + ++T IR+MKNLRV
Sbjct: 437 LKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRV 496
Query: 552 CEDCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
C DCH ALKL+S+I RE++ RD RFH K+G C+C++YW
Sbjct: 497 CADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME 212
D++ +N +I G V A +F+SMP RN+ +W VI AK G E+A+ FS +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 213 REGSRPNEVTVVAVLVACAQLGDLEFG-KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
+EG++P+ + AC LGD+ G + G + + +L+ M + G L
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 272 EEGCRVFDGMRERTVVSWSSMI 293
+E R + M E V W +++
Sbjct: 335 DEALRFVESM-EPNVDLWETLM 355
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 201/410 (49%), Gaps = 35/410 (8%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+IV WN+ E G ++ + +R ++ LKAC+ + G++ H
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 112 AYVQKLGFQSNLI--LQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
V + S+ I ++N L+ +Y+ C + HA ++F ++ ++TWN
Sbjct: 344 CLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN----------- 392
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
S+ISG A SEE + EM G PN +T+ ++L
Sbjct: 393 --------------------SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVC-NALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
A++G+L+ GK H + ++ + N+L+DMY K G + RVFD MR+R V+
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT 492
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
++S+I G+ M RSG+KP+HVT + VL ACSH LV +G FT M
Sbjct: 493 YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
+GI +EHY C+VDL RAG L++AR++ + P+ + LL C +H N +
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIG 612
Query: 409 EEAM-RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT 457
E A + L E P + G+Y++++++YA G W ++ ++ + GV+K
Sbjct: 613 EWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKA 662
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+PWN + + +++S++ R+ I D FT ++KAC D GR++H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
++ + NL + N L+ +Y G+ AR +FD+M ++D +WN +I S +G A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 174 RDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
L D M V +W ++ G + G AL M R V ++ L A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 230 CAQLGDLEFGKSIH----RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
C+ +G L++GK H R + + NV N+LI MY +C L VF + +
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVR--NSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
+ +W+S+I GFA + M+ SG PNH+T +L + VG + G+EF
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ R + + LVD+ +++G + A+ V +M + V + +L+ G
Sbjct: 448 YILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG 499
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 142/347 (40%), Gaps = 70/347 (20%)
Query: 89 FTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDK 148
++ + LL C ++ V G+ +HA+ G + + +L L+ Y++ A+ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 149 MPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVF 208
WN++IG I RN R +E++ V+
Sbjct: 144 SEILHPLPWNVLIGSYI-----------------RNKRF--------------QESVSVY 172
Query: 209 SEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC 268
M +G R +E T +V+ ACA L D +G+ +H E + N+YVCNALI MY +
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 269 GCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVT----- 323
G ++ R+FD M ER VSW+++I + M SG++ + VT
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 324 --------FIGVLH----------------------ACSHVGLVDKGREFFTIMRRDYGI 353
+IG L+ ACSH+G + G+ F ++ R
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 354 VPGVEHY-GCLVDLLSRAGRLEEAREVIANMSVPPNGV-VWGALLGG 398
+++ L+ + SR L A I V N + W +++ G
Sbjct: 353 SHDIDNVRNSLITMYSRCSDLRHA--FIVFQQVEANSLSTWNSIISG 397
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 201/410 (49%), Gaps = 35/410 (8%)
Query: 52 AIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIH 111
+IV WN+ E G ++ + +R ++ LKAC+ + G++ H
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 112 AYVQKLGFQSNLI--LQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
V + S+ I ++N L+ +Y+ C + HA ++F ++ ++TWN
Sbjct: 344 CLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN----------- 392
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
S+ISG A SEE + EM G PN +T+ ++L
Sbjct: 393 --------------------SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVC-NALIDMYVKCGCLEEGCRVFDGMRERTVVS 288
A++G+L+ GK H + ++ + N+L+DMY K G + RVFD MR+R V+
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT 492
Query: 289 WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
++S+I G+ M RSG+KP+HVT + VL ACSH LV +G FT M
Sbjct: 493 YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLA 408
+GI +EHY C+VDL RAG L++AR++ + P+ + LL C +H N +
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIG 612
Query: 409 EEAM-RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT 457
E A + L E P + G+Y++++++YA G W ++ ++ + GV+K
Sbjct: 613 EWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKA 662
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 164/353 (46%), Gaps = 11/353 (3%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+PWN + + +++S++ R+ I D FT ++KAC D GR++H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
++ + NL + N L+ +Y G+ AR +FD+M ++D +WN +I S +G A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 174 RDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
L D M V +W ++ G + G AL M R V ++ L A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 230 CAQLGDLEFGKSIH----RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
C+ +G L++GK H R + + NV N+LI MY +C L VF + +
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVR--NSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
+ +W+S+I GFA + M+ SG PNH+T +L + VG + G+EF
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
+ R + + LVD+ +++G + A+ V +M + V + +L+ G
Sbjct: 448 YILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG 499
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 142/347 (40%), Gaps = 70/347 (20%)
Query: 89 FTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDK 148
++ + LL C ++ V G+ +HA+ G + + +L L+ Y++ A+ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 149 MPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVF 208
WN++IG I RN R +E++ V+
Sbjct: 144 SEILHPLPWNVLIGSYI-----------------RNKRF--------------QESVSVY 172
Query: 209 SEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC 268
M +G R +E T +V+ ACA L D +G+ +H E + N+YVCNALI MY +
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 269 GCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVT----- 323
G ++ R+FD M ER VSW+++I + M SG++ + VT
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 324 --------FIGVLH----------------------ACSHVGLVDKGREFFTIMRRDYGI 353
+IG L+ ACSH+G + G+ F ++ R
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 354 VPGVEHY-GCLVDLLSRAGRLEEAREVIANMSVPPNGV-VWGALLGG 398
+++ L+ + SR L A I V N + W +++ G
Sbjct: 353 SHDIDNVRNSLITMYSRCSDLRHA--FIVFQQVEANSLSTWNSIISG 397
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 156/291 (53%), Gaps = 2/291 (0%)
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEME 212
D+ +IG G + +AR +FD R++V +W +I AK G+ EE + + +M+
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Query: 213 REGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLE 272
E +PN T V +L +CA G+++ E + + AL+DMY K G LE
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLE 380
Query: 273 EGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG--MKPNHVTFIGVLHA 330
+ +F+ M+++ V SW++MI G+ H M ++PN +TF+ VL+A
Sbjct: 381 KAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNA 440
Query: 331 CSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGV 390
CSH GLV +G F M Y P VEHYGC+VDLL RAG+LEEA E+I N+ + +
Sbjct: 441 CSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDST 500
Query: 391 VWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEE 441
W ALL CR++ N L E M L+E+ + ++++ +A AG E+
Sbjct: 501 AWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEK 551
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 159/368 (43%), Gaps = 37/368 (10%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
+N+ ++ ++ P S+F +LR + D F+ LK+C+ + G +H
Sbjct: 93 FNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIAL 152
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ-DVATWNIMIGHLISAGDVGAAR 174
+ GF L+N L+H Y CG+ S AR +FD+MPQ D T++ ++ + A
Sbjct: 153 RSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALAL 212
Query: 175 DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
DLF M + V N T+++ L A + LG
Sbjct: 213 DLFRIMRKSEV-------------------------------VVNVSTLLSFLSAISDLG 241
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
DL +S H G ++++ ALI MY K G + R+FD + VV+W+ MI
Sbjct: 242 DLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMID 301
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIV 354
+A M MKPN TF+G+L +C++ GR ++ + +
Sbjct: 302 QYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIAL 361
Query: 355 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRH 414
+ LVD+ ++ G LE+A E+ M + W A++ G H LA EA+
Sbjct: 362 DAILGTA-LVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAH---GLAREAVTL 416
Query: 415 LSELDPLN 422
++++ N
Sbjct: 417 FNKMEEEN 424
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
D A +V WN + +A+ G + + L +++ + P+ T LL +C S
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAF 345
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
GR + +++ + IL L+ +YA G A +F++M +DV +W
Sbjct: 346 VGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSW-------- 397
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGS--RPNEVTV 223
T++ISG G++ EA+ +F++ME E RPNE+T
Sbjct: 398 -----------------------TAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITF 434
Query: 224 VAVLVACAQLGDLEFG-KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEG 274
+ VL AC+ G + G + R E F V ++D+ + G LEE
Sbjct: 435 LVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 138/350 (39%), Gaps = 37/350 (10%)
Query: 141 HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGM 200
H ++ + + D A ++ S D+ A +F+ + N+ + ++I G +
Sbjct: 48 HGYMVKTGLDKDDFAVSKLL--AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 201 SEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNA 260
E A VF+++ +G + + + L +C++ + G+ +H A +GF+ + NA
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNA 165
Query: 261 LIDMYVKCGCLEEGCRVFDGMRERT-VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
LI Y CG + + +VFD M + V++S+++ G+ M +S +
Sbjct: 166 LIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVV 225
Query: 320 NHVTFIGVLHACSHVGL---------------VDKGREFFTIMRRDYGIVPGVEH----- 359
N T + L A S +G +D T + YG G+
Sbjct: 226 NVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF 285
Query: 360 ----------YGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIK 406
+ C++D ++ G LEE ++ M + PN + LL C +
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAF 345
Query: 407 LAEEAMRHLSELDPLNDGYY-VVMSNVYAEAGKWEEVSRIRRSMKSRGVK 455
+ L E D + ++YA+ G E+ I MK + VK
Sbjct: 346 VGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVK 395
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 202/420 (48%), Gaps = 42/420 (10%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
++ WNS + A+ G+ D++ LF +++ P L C+ +SDI +G+ IH
Sbjct: 280 VISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHC 339
Query: 113 YVQKLGFQ-SNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVG 171
YV K+GF S+L +Q+ L+ +Y C ++ L
Sbjct: 340 YVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL--------------------------- 372
Query: 172 AARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACA 231
L+ S+P N+ S+++ L CG++++ + +F M EG+ +EVT+ VL A +
Sbjct: 373 ----LYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
Query: 232 QLGDLEFGKSIHRF------AEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
L +S+H A +G+ +V V +LID Y K G E +VFD +
Sbjct: 429 ----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPN 484
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
+ +S+I G+A + M R + P+ VT + VL CSH GLV++G F
Sbjct: 485 IFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFD 544
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
+ YGI PG + Y C+VDLL RAG +E+A ++ + V W +LL CR+H+N
Sbjct: 545 SLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNE 604
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
+ A L L+P N Y+ +S Y E G +E +IR SR + + G SS+ +
Sbjct: 605 TIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVV 664
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 163/370 (44%), Gaps = 40/370 (10%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQK 116
N L+ F + G ++LR+ + + T ++++ C+ + G+ +H+ V K
Sbjct: 182 NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVK 241
Query: 117 LGFQ-SNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
G+ SN+ + N+L+ Y++CG+ S + F+ +P++DV +WN
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWN----------------- 284
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
S++S A G ++L +FS+M+ G RP+ ++ L C++ D
Sbjct: 285 --------------SIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD 330
Query: 236 LEFGKSIHRFAEGNGF-LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIV 294
++ GK IH + GF + +++V +ALIDMY KC +E ++ + + +S++
Sbjct: 331 IQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMT 390
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI--MRRDYG 352
MI G + VT VL A S + L + + G
Sbjct: 391 SLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS-LSLPESLHSCTLVHCCAIKSG 449
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAM 412
V L+D +++G+ E +R+V + PN +++ G + + + +
Sbjct: 450 YAADVAVSCSLIDAYTKSGQNEVSRKVFDELDT-PNIFCLTSIING---YARNGMGTDCV 505
Query: 413 RHLSELDPLN 422
+ L E+D +N
Sbjct: 506 KMLREMDRMN 515
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 145 MFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEA 204
++ P V T N I LI +G++ +A + FD M R+V ++ +ISG ++ G S A
Sbjct: 37 FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRA 96
Query: 205 LRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
+ +++EM G R + T +VL C+ G +H GF N++V +AL+ +
Sbjct: 97 IELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGL 156
Query: 265 YVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
Y ++ ++FD M +R + + ++ F M G+ N +T+
Sbjct: 157 YACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTY 216
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 384
++ CSH LV +G++ +++ + + + LVD S G L + +
Sbjct: 217 CYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFN--A 274
Query: 385 VPPNGVV-WGALLGGC 399
VP V+ W +++ C
Sbjct: 275 VPEKDVISWNSIVSVC 290
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 180/380 (47%), Gaps = 36/380 (9%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
DL IV WN+ L + + + +RQ D+ T ++L C+ SD+
Sbjct: 353 DLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQ 412
Query: 106 TGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLI 165
G+ H ++ + G+ +N+I+ N LL +Y CG A + F +M +
Sbjct: 413 MGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL------------- 459
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
R+ SW ++++G+A+ G SE+AL F M+ E ++P++ T+
Sbjct: 460 -----------------RDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLAT 501
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
+L CA + L GK+IH F +G+ +V + A++DMY KC C + VF R
Sbjct: 502 LLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRD 561
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
++ W+S+I G + + G+KP+HVTF+G+L AC G V+ G ++F+
Sbjct: 562 LILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFS 621
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNI 405
M Y I P VEHY C+++L + G L + E + M P + + C+ ++
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWS 681
Query: 406 KLAEEAMRHLSELDPLNDGY 425
KL A + L +ND Y
Sbjct: 682 KLGAWAAKRL-----MNDHY 696
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 176/350 (50%), Gaps = 4/350 (1%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P+ V WN ++ + E G + + +F ++ +L++ P + T S ++ AC+ S + G++I
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
HA KL ++ ++ + +Y C AR +FD+ +D+ +W + +G
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
AR+LFD MP RN+ SW +++ G +EAL + M +E + VT+V +L C
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE-RTVVSW 289
+ + D++ GK H F +G+ NV V NAL+DMY KCG L+ F M E R VSW
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSW 465
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
++++ G A M + KP+ T +L C+++ ++ G+ + R
Sbjct: 466 NALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGC 399
D G V G +VD+ S+ + A EV + + ++W +++ GC
Sbjct: 525 D-GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE-AATRDLILWNSIIRGC 572
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 160/374 (42%), Gaps = 63/374 (16%)
Query: 56 WNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQ 115
WN+ + A+ G + +F R+ + + + + +LK+C + D+ R +H V
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVV 189
Query: 116 KLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARD 175
K G+ N+ L+ ++ +Y C S AR +FD++ +WN+++
Sbjct: 190 KYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIV-------------- 235
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
RR + + G ++EA+ +F +M RP TV +V++AC++
Sbjct: 236 ------RRYL-----------EMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVG 295
LE GK IH A + + V ++ DMYVKC LE RVFD R + + SW+S + G
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSG 338
Query: 296 FAM------------------------------HXXXXXXXXXXXXMIRSGMKP-NHVTF 324
+AM H ++R ++ ++VT
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 325 IGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 384
+ +L+ CS + V G++ + R +G V L+D+ + G L+ A MS
Sbjct: 399 VWILNVCSGISDVQMGKQAHGFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS 457
Query: 385 VPPNGVVWGALLGG 398
+ V W ALL G
Sbjct: 458 ELRDEVSWNALLTG 471
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 5/274 (1%)
Query: 168 GDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVL 227
G V AR+LF+ MP R+ SW +VI+ A+ G+S+E R+F M R+G R E + VL
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVL 169
Query: 228 VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV 287
+C + DL + +H G+ NV + +++D+Y KC + + RVFD + + V
Sbjct: 170 KSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDV 229
Query: 288 SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM 347
SW+ ++ + M+ ++P + T V+ ACS ++ G+ I
Sbjct: 230 SWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIA 289
Query: 348 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKL 407
+ +V + D+ + RLE AR V + + + W + + G + +
Sbjct: 290 VK-LSVVADTVVSTSVFDMYVKCDRLESARRVF-DQTRSKDLKSWTSAMSGYAMSGLTRE 347
Query: 408 AEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEE 441
A E + E + ++ + M Y A +W+E
Sbjct: 348 ARELFDLMPERNIVS---WNAMLGGYVHAHEWDE 378
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 255 VYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 314
+++ N I+ Y KCGC+++ +F+ M ER SW+++I A + M R
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 315 SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 374
G++ +F GVL +C + + R+ + + YG V+ +VD+ + +
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK-YGYSGNVDLETSIVDVYGKCRVMS 214
Query: 375 EAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLN 422
+AR V + V P+ V W ++ R + + +EA+ ++ LN
Sbjct: 215 DARRVFDEI-VNPSDVSWNVIV---RRYLEMGFNDEAVVMFFKMLELN 258
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 198/423 (46%), Gaps = 33/423 (7%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V WN + ++ G + F +R++ I PD +T S ++ C+ ++ G+ A
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALA 259
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
K+GF SN I+ + +++ C + +F ++ + D N MIG
Sbjct: 260 LCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY-------- 311
Query: 173 ARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQ 232
SW CG E+ALR+F + RP++ T +VL +
Sbjct: 312 --------------SWHC-------CG--EDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
Query: 233 LGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSM 292
+ L+ G +H GF + V +L++MY K G ++ VF + ++ W+++
Sbjct: 349 VM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTV 407
Query: 293 IVGFAMHXXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
I+G A + ++ +KP+ VT +G+L AC + G V++G + F+ M + +
Sbjct: 408 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 467
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEA 411
G+ PG EHY C+++LL R G + EA+++ + P+ +W +L + +LAE
Sbjct: 468 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 527
Query: 412 MRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
+ + E +P + Y+V+ +Y +WE ++R +M +K G S I+I+ V
Sbjct: 528 AKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFS 587
Query: 472 FVA 474
F A
Sbjct: 588 FEA 590
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 155/321 (48%), Gaps = 10/321 (3%)
Query: 85 LPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARL 144
+P S L+ +S +I+HA + + GF N L LY G +A
Sbjct: 1 MPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQ 60
Query: 145 MFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEA 204
+FD +P ++ TWN+ + L G + A DLFD MP R+V SW ++ISGL CG E
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG 120
Query: 205 LRVFSEMEREGSRPNEVT--VVAVLVACAQLGDLEFGKSIHRFAEGNGFLR-NVYVCNAL 261
+RVF +M+R RP E T ++A LV C + G+ IH A +G R N+ V N++
Sbjct: 121 IRVFFDMQRWEIRPTEFTFSILASLVTCVR-----HGEQIHGNAICSGVSRYNLVVWNSV 175
Query: 262 IDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
+DMY + G + VF M +R VVSW+ +I+ + M ++P+
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE 235
Query: 322 VTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 381
T V+ CS + + KG++ + + G + G +D+ S+ RL+++ ++
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIK-MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Query: 382 NMSVPPNGVVWGALLGGCRLH 402
+ + V+ +++G H
Sbjct: 295 ELE-KWDSVLCNSMIGSYSWH 314
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 153/359 (42%), Gaps = 13/359 (3%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+ WN CLK + G + + LF + + ++ + S L+ +C G +
Sbjct: 71 ITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLV-SCGFHE---YGIRVFFD 126
Query: 114 VQKLGFQSNLILQNMLLHLYASC---GETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
+Q+ + ++L L +C GE H + + + ++ WN ++ G
Sbjct: 127 MQRWEIRPTEFTFSILASL-VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
A +F +M R+V SW +I + G E AL F M +P+E TV V+ C
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
+ L +L GK GFL N V A IDM+ KC L++ ++F + + V +
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
SMI ++ H + ++P+ TF VL + + V ++D G + +++ +
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIK- 363
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAE 409
G L+++ + G ++ A V A + + W ++ G L +N + E
Sbjct: 364 LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTD-GKDLIFWNTVIMG--LARNSRAVE 419
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 190/399 (47%), Gaps = 26/399 (6%)
Query: 199 GMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVC 258
G EA+ V +E +G + + ++ + C + LE + +H +V
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 259 NALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMK 318
NA+I+MY C +++ +VF+ M E + M+ F + G K
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 319 PNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 378
PN F V C+ G V +G F M R+YGIVP +EHY + +L+ +G L+EA
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 379 VIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGK 438
+ M + P+ VW L+ R+H +++L + + +LD A +
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD----------------ATR 321
Query: 439 WEEVSR--IRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 496
++VS + + S VKK P S F D +HPQ I+E L ++
Sbjct: 322 LDKVSSAGLVATKASDFVKKEPSTRSEPY--FYSTFRPVDSSHPQMNIIYETLMSLRSQL 379
Query: 497 KMKGYIPDTSV---VLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCE 553
K GY+PDT +++ ME+++ +IF YR E++A+V L+ +KP I ++ N+R+
Sbjct: 380 KEMGYVPDTRYYRSLIMAMENKE-QIFGYR--EEIAVVESLLKSKPRSAITLLTNIRIVG 436
Query: 554 DCHTALKLVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
DCH +KL+S I R+++ RD +H FKNG C C + W
Sbjct: 437 DCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 191/392 (48%), Gaps = 19/392 (4%)
Query: 203 EALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALI 262
EAL V +E +G + ++ + C ++ LE + +H + + +I
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP----LDARSYHTVI 150
Query: 263 DMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHV 322
+MY C ++ VF+ M +R +W +MI A + I G KP+
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 323 TFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 382
F V AC +G +++G F M RDYG+V +E Y ++++L+ G L+EA + +
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 383 MSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEV 442
M+V P+ +W L+ C + ++L + + +LD S + E+
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDA---------SRMSKESNAGLVA 321
Query: 443 SRIRRSMKSRGVKKTPGCSSITID--GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKG 500
++ S + +K+ C I D +HEF AGD +H G + L V+M G
Sbjct: 322 AKASDSAMEK-LKELRYCQMIRDDPKKRMHEFRAGDTSHL---GTVSAFRSLKVQMLDIG 377
Query: 501 YIPDTSVVLLDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALK 560
++P T V + +E+E+KE L S KLA + +IN++ P+ +++N+R C D H K
Sbjct: 378 FVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFK 437
Query: 561 LVSEIENREIVVRDRNRFHCFKNGACTCKDYW 592
++S I R ++ RD+ ++H +KNG C+CKDYW
Sbjct: 438 MISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 11/173 (6%)
Query: 129 LLHLYASCGETS---HARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNV 185
LL L CGE AR++ D + D +++ +I A ++F+ MP+RN
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNS 174
Query: 186 RSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFG----KS 241
+W ++I LAK G E A+ +F+ EG++P++ AV AC +GD+ G +S
Sbjct: 175 ETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFES 234
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR-ERTVVSWSSMI 293
++R G + ++ +I+M CG L+E + M E +V W +++
Sbjct: 235 MYR---DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 166/360 (46%), Gaps = 33/360 (9%)
Query: 39 NAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKAC 98
+ L D+ ++ W + + + +G I +F+ + LP+ FT +LKAC
Sbjct: 235 TSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKAC 294
Query: 99 TISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWN 158
+ + GR +H+ V K ++++ + L+ +YA CGE S R
Sbjct: 295 SEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR--------------- 339
Query: 159 IMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRP 218
+FD M RN +WTS+I+ A+ G EEA+ +F M+R
Sbjct: 340 ----------------KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIA 383
Query: 219 NEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVF 278
N +TVV++L AC +G L GK +H N +NVY+ + L+ +Y KCG + V
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 279 DGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
+ R VVSW++MI G + MI+ G++PN T+ L AC++ +
Sbjct: 444 QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL 503
Query: 339 KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
GR +I ++++ + V L+ + ++ G + EA V +M N V W A++ G
Sbjct: 504 IGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMG 561
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 167/369 (45%), Gaps = 44/369 (11%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDH---FTCSFLLKACTISSDIVTGRII 110
V W + + + + G + +LF + I + F C LL C+ ++ GR +
Sbjct: 149 VTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVC--LLNLCSRRAEFELGRQV 206
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
H + K+G NLI+++ L++ YA CGE +
Sbjct: 207 HGNMVKVGV-GNLIVESSLVYFYAQCGELT------------------------------ 235
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
+A FD M ++V SWT+VIS ++ G +A+ +F M PNE TV ++L AC
Sbjct: 236 -SALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKAC 294
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWS 290
++ L FG+ +H +V+V +L+DMY KCG + + +VFDGM R V+W+
Sbjct: 295 SEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWT 354
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S+I A M R + N++T + +L AC VG + G+E + ++
Sbjct: 355 SIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN 414
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-WGALLGGCRLHKNIKLAE 409
I V LV L + G +A V+ + P VV W A++ GC ++
Sbjct: 415 -SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQL--PSRDVVSWTAMISGC---SSLGHES 468
Query: 410 EAMRHLSEL 418
EA+ L E+
Sbjct: 469 EALDFLKEM 477
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 7/256 (2%)
Query: 158 NIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR 217
N +I + GD+ AR +FDSMP +N +WT++I G K G+ +EA +F + + G R
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 218 -PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCR 276
NE V +L C++ + E G+ +H G + N+ V ++L+ Y +CG L R
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALR 239
Query: 277 VFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGL 336
FD M E+ V+SW+++I + M+ PN T +L ACS
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 337 VDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALL 396
+ GR+ +++ + I V L+D+ ++ G + + R+V MS N V W +++
Sbjct: 300 LRFGRQVHSLVVKRM-IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWTSII 357
Query: 397 GGCRLHKNIKLAEEAM 412
H EEA+
Sbjct: 358 AA---HAREGFGEEAI 370
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 47 LAHVPA--IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDI 104
L +P+ +V W + + + G + + + Q + P+ FT S LKAC S +
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502
Query: 105 VTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHL 164
+ GR IH+ +K SN+ + + L+H+YA CG S A +FD MP++++ +W M
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAM---- 558
Query: 165 ISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
I G A+ G EAL++ ME EG ++
Sbjct: 559 ---------------------------IMGYARNGFCREALKLMYRMEAEGFEVDDYIFA 591
Query: 225 AVLVACAQLGDLEFGKSIHRFA 246
+L C GD+E +++ A
Sbjct: 592 TILSTC---GDIELDEAVESSA 610
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 143/326 (43%), Gaps = 31/326 (9%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAY 113
+ W + + +A G + + ++Q PD T + +L C I G+ IH Y
Sbjct: 384 ISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCY 443
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAA 173
K F N+ L L+ +Y+ CG +P+ +
Sbjct: 444 ALKNLFLPNVSLVTSLMVMYSKCG-----------VPEYPI------------------- 473
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
LFD + +RNV++WT++I + + VF M RP+ VT+ VL C+ L
Sbjct: 474 -RLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDL 532
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMI 293
L+ GK +H F +V +I MY KCG L FD + + ++W+++I
Sbjct: 533 KALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAII 592
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
+ + M+ G PN TF VL CS G VD+ FF +M R Y +
Sbjct: 593 EAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNL 652
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREV 379
P EHY +++LL+R GR+EEA+ +
Sbjct: 653 QPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 135/266 (50%), Gaps = 6/266 (2%)
Query: 137 GETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLA 196
G+ HA ++ K + + +I GD+ + R +F +RN SWT+++SG A
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 197 KCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVY 256
G ++ALR M++EG RP+ VT+ VL CA+L ++ GK IH +A N FL NV
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVS 454
Query: 257 VCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG 316
+ +L+ MY KCG E R+FD + +R V +W++MI + + M+ S
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFFT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 375
+P+ VT VL CS + + G+E I+++++ +P V ++ + + G L
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRS 572
Query: 376 AREVIANMSVPPNGVVWGALLG--GC 399
A ++V + W A++ GC
Sbjct: 573 ANFSFDAVAV-KGSLTWTAIIEAYGC 597
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 147/322 (45%), Gaps = 34/322 (10%)
Query: 53 IVPWNSCLKFFAERGAP--CDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
+ WN+ L+ G D +S F +R+L + + ++ S + K+ +S + G
Sbjct: 177 VYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT 236
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
HA K G +++ L+ L+ +Y CG+ AR +FD++ ++D+ W MI L
Sbjct: 237 HALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA----- 291
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
N R W ++ GL + +SEE + PN V + +L
Sbjct: 292 ------------HNKRQWEAL--GLFRTMISEEKI-----------YPNSVILTTILPVL 326
Query: 231 AQLGDLEFGKSIH-RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSW 289
+ L+ GK +H + ++ +V + LID+Y KCG + G RVF G ++R +SW
Sbjct: 327 GDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISW 386
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
++++ G+A + M + G +P+ VT VL C+ + + +G+E +
Sbjct: 387 TALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK 446
Query: 350 DYGIVPGVEHYGCLVDLLSRAG 371
+ +P V L+ + S+ G
Sbjct: 447 NL-FLPNVSLVTSLMVMYSKCG 467
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 145/344 (42%), Gaps = 39/344 (11%)
Query: 60 LKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGF 119
++ FA + +++ L Q I + T S LL+AC ++ G+ +H +++ G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 120 QSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDS 179
+SN L+ L+H+Y +CG V A+ +FD
Sbjct: 143 ESNEFLRTKLVHMYTACG-------------------------------SVKDAQKVFDE 171
Query: 180 MPRRNVRSWTSVISGLAKCGMS--EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLE 237
NV SW +++ G G ++ L F+EM G N ++ V + A L
Sbjct: 172 STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALR 231
Query: 238 FGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFA 297
G H A NG +V++ +L+DMY KCG + RVFD + ER +V W +MI G A
Sbjct: 232 QGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 291
Query: 298 MHXXXXXXXXXXXXMI-RSGMKPNHVTFIGVLHACSHVGLVDKGREFFT--IMRRDYGIV 354
+ MI + PN V +L V + G+E + ++Y
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 355 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGG 398
P V H G L+DL + G + R V S N + W AL+ G
Sbjct: 352 PFV-HSG-LIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSG 392
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 89/143 (62%), Gaps = 13/143 (9%)
Query: 457 TPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM-------KGYIPDTSVVL 509
+P S + G E G++ K I + K VK+K GY+P+T VL
Sbjct: 103 SPSSHSTKVRGDKPEISGGEK-----KAIVDR-SKAYVKLKSLGKEVRDAGYVPETKYVL 156
Query: 510 LDMEDEQKEIFLYRHSEKLALVYGLINTKPGMPIRIMKNLRVCEDCHTALKLVSEIENRE 569
D+++E KE L HSE+LA+ +G+INT PG IR+MKNLR+C DCH +K++S IE+RE
Sbjct: 157 HDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDRE 216
Query: 570 IVVRDRNRFHCFKNGACTCKDYW 592
I+VRD RFH F++G C+C DYW
Sbjct: 217 IIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 129/519 (24%), Positives = 223/519 (42%), Gaps = 90/519 (17%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P+I+ ++ L A+ ISL +++ L I +H+T S L+ S + +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM------P-------------- 150
+ KLG++ N++ + LL+ Y S A + D+M P
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 151 -------------------QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRS---- 187
Q D+ T+ +++ L GD A +L + M + +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 188 WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAE 247
+ ++I GL K ++AL +F EME +G RPN VT +++ G R+++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG---------RWSD 309
Query: 248 GNGFLR---------NVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIV 294
+ L +V+ +ALID +VK G L E +++D M +R ++V++SS+I
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIV 354
GF MH M+ P+ VT+ ++ V++G E F M + G+V
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLV 428
Query: 355 PGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEA 411
Y L+ L +AG + A+E+ M VPPN + + LL G L KN KL E+A
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG--LCKNGKL-EKA 485
Query: 412 M-----RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITID 466
M S+++P Y +++ + +AGK E+ + ++ +GVK + I
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGM-CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 467 GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 505
G KG E + L +MK G +P++
Sbjct: 545 GFCR------------KGSKEEADALFKEMKEDGTLPNS 571
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 146/346 (42%), Gaps = 15/346 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKA-CTISSDIVTGRI 109
P ++ +N+ + + D ++LF + I P+ T S L+ C R+
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDV----ATWNIMIGHLI 165
+ +++ ++ + L+ + G+ A ++D+M ++ + T++ +I
Sbjct: 314 LSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 166 SAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
+ A+ +F+ M + +V ++ ++I G K EE + VF EM + G N V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
T ++ Q GD + + I + +G N+ N L+D K G LE+ VF+ +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 282 R----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
+ E T+ +++ MI G + G+KP+ V + ++ G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 383
++ F M+ D G +P Y L+ R G E + E+I M
Sbjct: 553 EEADALFKEMKED-GTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 8/209 (3%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V +N+ +K F + + + +F + Q ++ + T + L++ + D + I
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD----VATWNIMIGHLIS 166
+ G N++ N LL G+ A ++F+ + + + T+NIMI +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 167 AGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
AG V DLF ++ + V+ ++ ++ISG + G EEA +F EM+ +G+ PN
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
++ A + GD E + + GF
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGF 602
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 224/501 (44%), Gaps = 57/501 (11%)
Query: 34 LLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSF 93
L+I + + ++H + +N + F R ++L ++ +L P T S
Sbjct: 103 LVISLGEKMQRLGISH--NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ- 152
LL I + + ++G++ + I L+H + S A + D+M Q+
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 153 ---DVATWNIMIGHLISAGDVGAARDLFDSMP----RRNVRSWTSVISGLAKCGMSEEAL 205
++ T+ +++ L GD+ A +L + M NV +++VI L K ++AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 206 RVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLR---------NVY 256
+F+EME +G RPN +T + L++C L + E R+++ + L NV
Sbjct: 281 NLFTEMENKGVRPNVITYSS-LISC--LCNYE------RWSDASRLLSDMIERKINPNVV 331
Query: 257 VCNALIDMYVKCGCLEEGCRVFDGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXM 312
NALID +VK G L E +++D M +R++ ++SS+I GF MH M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 313 IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGR 372
I PN VT+ +++ +D+G E F M + G+V Y L+ +A
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQARD 450
Query: 373 LEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAM-----RHLSELDPLNDG 424
+ A+ V M V PN + + LL G L KN KL E+AM S+++P
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDG--LCKNGKL-EKAMVVFEYLQRSKMEPTIYT 507
Query: 425 YYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 484
Y +++ + +AGK E+ + S+ +GVK + I G KG
Sbjct: 508 YNIMIEGM-CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR------------KG 554
Query: 485 IFEMWEKLLVKMKMKGYIPDT 505
+ E + L KM+ G +PD+
Sbjct: 555 LKEEADALFRKMREDGPLPDS 575
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 191/478 (39%), Gaps = 44/478 (9%)
Query: 71 DTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLL 130
D I LF + + LP F + LL A + +Q+LG NL N+L+
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 131 HLYASCGETSHARLMFDKMP----QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR 186
+ + + S A + KM + + T + ++ + A L D M R
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 187 ----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSI 242
++T++I GL + EA+ + M + G +PN VT V+ + GD++ ++
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAM 298
E NV + + +ID K ++ +F M + V+++SS+I
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 299 HXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG-LVDKGREFFTIMRRDYGIVPGV 357
+ MI + PN VTF ++ A G LV+ + + +++R I P +
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDI 365
Query: 358 EHYGCLVDLLSRAGRLEEAR---EVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRH 414
Y L++ RL+EA+ E++ + PN V + L+ G K I E R
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 415 LSELDPL-NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG------ 467
+S+ + N Y + + + +A + + + M S GV + +DG
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 468 -----VVHEFVAGDETHP-------------QAKGIFEMWEKLLVKMKMKGYIPDTSV 507
VV E++ + P +A + + W+ L + +KG PD +
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD-LFCSLSLKGVKPDVII 542
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V +N+ + F + + + LF + Q ++ + T + L+ + D +++
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD----VATWNIMIGHLIS 166
+ G N++ N LL G+ A ++F+ + + + T+NIMI +
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 167 AGDVGAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
AG V DLF S+ + V+ + ++ISG + G+ EEA +F +M +G P+ T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 201/450 (44%), Gaps = 35/450 (7%)
Query: 74 SLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLY 133
S+ R +L PD T S L+ + + + + ++ + +L+ + L++
Sbjct: 126 SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 185
Query: 134 ASCGETSHARLMFDKMP----QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRS-- 187
G S A ++ D+M Q D T+ ++ L +G+ A DLF M RN+++
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245
Query: 188 --WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRF 245
++ VI L K G ++AL +F+EME +G + + VT +++ G + G + R
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 246 AEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV----VSWSSMIVGFAMHXX 301
G + +V +ALID++VK G L E +++ M R + ++++S+I GF
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
M+ G +P+ VT+ ++++ VD G F + G++P Y
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYN 424
Query: 362 CLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGC----RLHKNIKLAEEAMRH 414
LV ++G+L A+E+ M VPP+ V +G LL G L+K +++ E+ +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 415 LSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVA 474
L G Y ++ + A K ++ + S+ +GVK ++ I G+
Sbjct: 485 RM---TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK---- 537
Query: 475 GDETHPQAKGIFEMWEKLLVKMKMKGYIPD 504
KG + L KMK G PD
Sbjct: 538 --------KGSLSEADMLFRKMKEDGCTPD 559
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 185/411 (45%), Gaps = 37/411 (9%)
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP----QQDVATWNIMIGHLISAGD 169
V KLG++ + N L+ G+ S A ++ D+M Q DV T+N ++ + +GD
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 170 VGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
A DL M RNV+ +++++I L + G + A+ +F EME +G + + VT +
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER- 284
++ + G G + + + NV N L+D++VK G L+E ++ M R
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 285 ---TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGR 341
++++++++ G+ M M+R+ P+ VTF ++ V VD G
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 342 EFF-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLG 397
+ F I +R G+V Y LV ++G+++ A E+ M V P+ + +G LL
Sbjct: 389 KVFRNISKR--GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 398 GCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAE----AGKWEEVSRIRRSMKSRG 453
G L N KL E+A+ +L +VM E GK E+ + S+ +G
Sbjct: 447 G--LCDNGKL-EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 454 VKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD 504
VK ++ I G+ KG LL KM+ G P+
Sbjct: 504 VKPNVMTYTVMISGLCK------------KGSLSEANILLRKMEEDGNAPN 542
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P I+ +N+ + + + + ++ + + PD T + L+K + + G +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ K G +N + ++L+ + G+ A +F +M DV T+ I++ L
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 167 AGDVGAARDLFDSMPRRN----VRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
G + A ++F+ + + + +T++I G+ K G E+A +F + +G +PN +T
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
++ + G L + R E +G N N LI +++ G L ++ + M+
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 8/224 (3%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P IV + S +K + D + +F + + ++ + T S L++ S I +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD----VATWNIMIGHLIS 166
+ G +++ +LL G+ A +F+ + + + + +I +
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 167 AGDVGAARDLFDSMP----RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
G V A +LF S+P + NV ++T +ISGL K G EA + +ME +G+ PN+ T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYV 266
++ A + GDL + + GF + +IDM +
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 123/303 (40%), Gaps = 18/303 (5%)
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDL 236
F S+ NV + SG+ ++A+ +F EM R P+ V A A+
Sbjct: 46 FSSISNGNVCFRERLRSGIVDIK-KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQF 104
Query: 237 EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC--GCLEEGC--RVFDGMRERTVVSWSSM 292
+ E NG N+Y N +I+ + +C C +V E +++++
Sbjct: 105 NLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 164
Query: 293 IVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYG 352
I G + M+ +G +P+ VT+ +++ G + M +
Sbjct: 165 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERN 223
Query: 353 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGG-CRLHK----N 404
+ V Y ++D L R G ++ A + M + + V + +L+ G C+ K
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 405 IKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSIT 464
+ L + R E+ P N + V+ +V+ + GK +E + + + M +RG+ +
Sbjct: 284 LLLKDMVSR---EIVP-NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 465 IDG 467
+DG
Sbjct: 340 MDG 342
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 217/518 (41%), Gaps = 86/518 (16%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P+IV +N L A+ ISL R++ L I D ++ + L+ S +
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM------P------------- 150
+ + KLG++ +++ + LL+ Y S A + D+M P
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 151 --------------------QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRS--- 187
Q D+ T+ ++ L GD+ A L M + + +
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 188 -WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA 246
+T++I L +AL +F+EM+ +G RPN VT +++ G R++
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG---------RWS 307
Query: 247 EGNGFLR---------NVYVCNALIDMYVKCGCLEEGCRVFDGMRERT----VVSWSSMI 293
+ + L NV +ALID +VK G L E +++D M +R+ + ++SS+I
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 294 VGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGI 353
GF MH MI PN VT+ ++ V++G E F M + G+
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GL 426
Query: 354 VPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEE 410
V Y L+ L +AG + A+++ M VPP+ + + LL G + ++ A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 411 AMRHL--SELDPLNDGY-YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
+L S+++P D Y Y +M +AGK E+ + S+ +GVK + I G
Sbjct: 487 VFEYLQKSKMEP--DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 468 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 505
KG+ E + L +MK G +P++
Sbjct: 545 FCR------------KGLKEEADALFREMKEDGTLPNS 570
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 140/326 (42%), Gaps = 15/326 (4%)
Query: 71 DTISLFLRLRQLSILPDHFTCSFLLKA-CTISSDIVTGRIIHAYVQKLGFQSNLILQNML 129
D ++LF + I P+ T + L++ C R++ +++ N++ + L
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSAL 331
Query: 130 LHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMPRR-- 183
+ + G+ A ++D+M ++ D+ T++ +I + A+ +F+ M +
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 184 --NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKS 241
NV ++ ++I G K EE + +F EM + G N VT ++ Q GD + +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR----ERTVVSWSSMIVGFA 297
I + +G ++ + L+D K G LE+ VF+ ++ E + +++ MI G
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 298 MHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGV 357
+ G+KPN + + ++ GL ++ F M+ D G +P
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNS 570
Query: 358 EHYGCLVDLLSRAGRLEEAREVIANM 383
Y L+ R G + E+I M
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEM 596
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 8/222 (3%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V +N+ +K F + + + LF + Q ++ + T + L++ + D + I
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ G ++I ++LL G+ A ++F+ + + D+ T+NIMI +
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 167 AGDVGAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
AG V DLF S+ + V+ +T++ISG + G+ EEA +F EM+ +G+ PN T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
++ A + GD + + GF+ + + +I+M
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 102/251 (40%), Gaps = 8/251 (3%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P I ++S + F + +F + P+ T + L+K + + G +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ + G N + N L+ G+ A+ +F KM D+ T++I++ L
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
G + A +F+ + + ++ ++ +I G+ K G E+ +F + +G +PN +
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
++ + G E ++ R + +G L N N LI ++ G + MR
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 283 ERTVVSWSSMI 293
V +S I
Sbjct: 598 SCGFVGDASTI 608
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 162/359 (45%), Gaps = 19/359 (5%)
Query: 127 NMLLHLYASCGETSHARLMFDKM----PQQDVATWNIMIGHLISAGDVGAARDLFDSMPR 182
N LLH +A G+T + F M + V T+NIMI + GDV AAR LF+ M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 183 R----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEF 238
R + ++ S+I G K G ++ + F EM+ P+ +T A++ + G L
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 239 GKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV----SWSSMIV 294
G +R +GNG NV + L+D + K G +++ + + MR +V +++S+I
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 295 GFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIV 354
M++ G++ N VT+ ++ + + E F M G++
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT-AGVI 469
Query: 355 PGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGG-CRLHKNIKLAEE 410
P + Y L+ +A ++ A E++ + + P+ +++G + G C L K I+ A+
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK-IEAAKV 528
Query: 411 AMRHLSELD-PLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGV 468
M + E N Y + + Y ++G E + MK ++ T + IDG+
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 13/313 (4%)
Query: 155 ATWNIMIGHLISAGDVGAARDLFDSMPRRNV----RSWTSVISGLAKCGMSEEALRVFSE 210
++ + LI G + A F M R V RS ++ AK G +++ R F +
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 211 MEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGC 270
M G+RP T ++ + GD+E + + + G + + N++ID + K G
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 271 LEEGCRVFDGMR----ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIG 326
L++ F+ M+ E V++++++I F M +G+KPN V++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 327 VLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV---IANM 383
++ A G++ + +F+ MRR G+VP Y L+D + G L +A + + +
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRR-VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 384 SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPL-NDGYYVVMSNVYAEAGKWEEV 442
V N V + AL+ G + +K AEE + + N Y + + + +A +
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 443 SRIRRSMKSRGVK 455
+ +K RG+K
Sbjct: 492 LELLNELKGRGIK 504
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 154/347 (44%), Gaps = 33/347 (9%)
Query: 175 DLFDSM-PRRNV-----RSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
D+FD + RNV + ++ S L GM EEA++ FS+M+R P + +L
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER---- 284
A+LG + K + G G V+ N +ID K G +E +F+ M+ R
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
V+++SMI GF M +P+ +T+ +++ G + G EF+
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 355
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALL-GGCR 400
M+ + G+ P V Y LVD + G +++A + +M + PN + +L+ C+
Sbjct: 356 REMKGN-GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 401 ---LHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT 457
L +L E ++ E + + Y + + +A + +E + M + GV
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVT---YTALIDGLCDAERMKEAEELFGKMDTAGV--I 469
Query: 458 PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD 504
P +S + ++H FV +AK + E LL ++K +G PD
Sbjct: 470 PNLAS--YNALIHGFV-------KAKNMDRALE-LLNELKGRGIKPD 506
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 155/400 (38%), Gaps = 52/400 (13%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
VP V +NS + F + G DT+ F ++ + PD T + L+ + G
Sbjct: 294 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 110 IHAYVQKLGFQSNLILQNMLLHLY---------------------------------ASC 136
+ ++ G + N++ + L+ + A+C
Sbjct: 354 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 413
Query: 137 --GETSHARLMFDKMPQ----QDVATWNIMIGHLISAGDVGAARDLFDSMPRR----NVR 186
G S A + ++M Q +V T+ +I L A + A +LF M N+
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 187 SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFA 246
S+ ++I G K + AL + +E++ G +P+ + + L +E K +
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 247 EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXX 302
+ G N + L+D Y K G EG + D M+E TVV++ +I G +
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 303 XXXXXXXXXMIRS-GMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
+ G++ N F ++ V+ F M + G+VP Y
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK-GLVPDRTAYT 652
Query: 362 CLVDLLSRAGRLEEA---REVIANMSVPPNGVVWGALLGG 398
L+D + G + EA R+ +A + + + + + +L+ G
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 213/499 (42%), Gaps = 53/499 (10%)
Query: 34 LLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSF 93
L+I + ++ ++H + ++ + F R +++ ++ +L PD T +
Sbjct: 99 LVISLGEQMQNLGISH--NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS 156
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP--- 150
LL + I + + ++G+Q + N L+H S A + D+M
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 151 -QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEAL 205
Q D+ T+ I++ L GD+ A L M + + + ++I L +AL
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 206 RVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLR---------NVY 256
+F+EM+ +G RPN VT +++ G R+++ + L NV
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYG---------RWSDASRLLSDMIERKINPNVV 327
Query: 257 VCNALIDMYVKCGCLEEGCRVFDGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXM 312
+ALID +VK G L E +++D M +R++ ++SS+I GF MH M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 313 IRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGR 372
I PN VT+ ++ VD+G E F M + G+V Y L+ +A
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARE 446
Query: 373 LEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHL--SELDPLNDGY-Y 426
+ A+ V M V P+ + + LL G + ++ A +L S+++P D Y Y
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP--DIYTY 504
Query: 427 VVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 486
+M +AGK E+ + S+ +GVK + + G KG+
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR------------KGLK 552
Query: 487 EMWEKLLVKMKMKGYIPDT 505
E + L +MK +G +PD+
Sbjct: 553 EEADALFREMKEEGPLPDS 571
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 201/487 (41%), Gaps = 63/487 (12%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P+IV ++ L A+ ISL +++ L I + +T S L+ S + +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
A + KLG++ +++ N LL+ + H + D + ++G ++ ++
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFC------HGNRISDAVS---------LVGQMV---EM 180
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
G D F ++ ++I GL + + EA+ + M +G +P+ VT V+
Sbjct: 181 GYQPDSF---------TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TV 286
+ GD++ S+ + E V + N +ID + + +F M + V
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG-LVDKGREFFT 345
V+++S+I + MI + PN VTF ++ A G LV+ + +
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR---EVIANMSVPPNGVVWGALLGGCRLH 402
+++R I P + Y L++ RL+EA+ E++ + PN V + L+ G
Sbjct: 352 MIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 403 KNIKLAEEAMRHLSELDPL-NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
K + E R +S+ + N Y + + + +A + + + + M S GV
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 462 SITIDG-----------VVHEFVAGDETHP-------------QAKGIFEMWEKLLVKMK 497
SI +DG VV E++ + P +A + + W+ L +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD-LFCSLS 528
Query: 498 MKGYIPD 504
+KG P+
Sbjct: 529 LKGVKPN 535
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 12/292 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V +NS ++ G D L + + I P+ T S L+ A +V +
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD----VATWNIMIGHLIS 166
+ + K ++ + L++ + A+ MF+ M +D V T+N +I
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
A V +LF M +R N ++T++I G + + A VF +M +G P+ +T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+L G +E + + + + ++Y N +I+ K G +E+G +F +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 283 ER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
+ VV++++M+ GF M G P+ T+ ++ A
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 97/193 (50%), Gaps = 8/193 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V +N+ +K F + + + LF + Q ++ + T + L+ + + +I+
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ G +++ ++LL + G+ A ++F+ + + D+ T+NIMI +
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
AG V DLF S+ + NV ++T+++SG + G+ EEA +F EM+ EG P+ T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 223 VVAVLVACAQLGD 235
++ A + GD
Sbjct: 574 YNTLIRAHLRDGD 586
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 119/290 (41%), Gaps = 33/290 (11%)
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
++A+ +F +M + P+ V +L A A++ + S+ + G N+Y + L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 262 IDMYVKCGCLEEGCRVFDGM----RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM 317
I+ + + L V M E +V+ +S++ GF M+ G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 318 KPNHVTFIGVLH-------ACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRA 370
+P+ TF ++H A V LVD+ +++ G P + YG +V+ L +
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDR-----MVVK---GCQPDLVTYGIVVNGLCKR 234
Query: 371 GRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY-- 425
G ++ A ++ M + P V++ ++ +KN+ +A+ +E+D N G
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV---NDALNLFTEMD--NKGIRP 289
Query: 426 ----YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
Y + G+W + SR+ M R + S ID V E
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 106/251 (42%), Gaps = 8/251 (3%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P I ++S + F + +F + P+ T + L+K + + G +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ + G N + L+H + E +A+++F +M D+ T++I++ L +
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
G V A +F+ + R ++ ++ +I G+ K G E+ +F + +G +PN VT
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
++ + G E ++ R + G L + N LI +++ G + MR
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Query: 283 ERTVVSWSSMI 293
V +S I
Sbjct: 599 SCRFVGDASTI 609
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 192/468 (41%), Gaps = 52/468 (11%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P+I+ + L A+ ISLF +++ L I P TC+ ++ +SS
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+ KLGF+ +L+ LL+ Y A +FD++
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF--------------- 184
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
+ NV ++T++I L K A+ +F++M GSRPN VT A++
Sbjct: 185 ------------KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV--- 286
++G + R NV ALID +VK G L E +++ M + +V
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 287 -VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
++ S+I G M+ M R+G PN V + ++H V+ G + F
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGGCRLH 402
M + G+V Y L+ GR + A+EV MS PP+ + LL G +
Sbjct: 353 EMSQK-GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 403 KNIKLA---EEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPG 459
++ A E MR E+D +N Y ++ + GK E+ + S+ S+G+K
Sbjct: 412 GKVEKALMIFEYMRK-REMD-INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 460 CSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 507
+ I G +G+ + L KMK G++P+ SV
Sbjct: 470 TYTTMISGFCR------------RGLIHEADSLFKKMKEDGFLPNESV 505
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 147/363 (40%), Gaps = 16/363 (4%)
Query: 45 VDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDI 104
+ L P +V + S L + D I+LF ++ + P+ T + L++ + +
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 105 VTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHA----RLMFDKMPQQDVATWNIM 160
+ + G + N++ N L+ G A R M + + +V T+ +
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 161 IGHLISAGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGS 216
I + G + A++L++ M + +V ++ S+I+GL G+ +EA ++F MER G
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 217 RPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCR 276
PNEV ++ + +E G I G + N LI Y G +
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 277 VFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACS 332
VF+ M R + +++ ++ G + M + M N VT+ ++
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 333 HVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNG 389
+G V+ + F + G+ P V Y ++ R G + EA + M PN
Sbjct: 445 KLGKVEDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Query: 390 VVW 392
V+
Sbjct: 504 SVY 506
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 160/374 (42%), Gaps = 44/374 (11%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTI-SLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
P ++ +N L F + G P + I SL +++ I PD +T + L+ C S
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+ ++ GF + + N LL +Y SH P++ + N M+ + S
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGK----SHR-------PKEAMKVLNEMVLNGFSPSI 349
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
V ++ S+IS A+ GM +EA+ + ++M +G++P+ T +L
Sbjct: 350 V----------------TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR----ERT 285
+ G +E SI G N+ NA I MY G E ++FD +
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFT 345
+V+W++++ F + M R+G P TF ++ A S G ++ T
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA---MT 510
Query: 346 IMRR--DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGGCR 400
+ RR D G+ P + Y ++ L+R G E++ +V+A M PN + + +LL
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 401 LHKNI----KLAEE 410
K I LAEE
Sbjct: 571 NGKEIGLMHSLAEE 584
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 22/318 (6%)
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVF 208
D + I+I L G V +A ++F+ + +V S+TS+IS A G EA+ VF
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 209 SEMEREGSRPNEVTVVAVLVACAQLGDLEFGK--SIHRFAEGNGFLRNVYVCNALIDMYV 266
+ME +G +P +T +L ++G + K S+ + +G + Y N LI
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMG-TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 267 KCGCLEEGCRVFDGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHV 322
+ +E +VF+ M+ V++++++ + M+ +G P+ V
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 323 TFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR---EV 379
T+ ++ A + G++D+ E M + G P V Y L+ RAG++E A E
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 380 IANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSN----VYAE 435
+ N PN + A + +++ N E M+ E++ +V N V+ +
Sbjct: 410 MRNAGCKPNICTFNAFI---KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 436 AGKWEEVSRIRRSMKSRG 453
G EVS + + MK G
Sbjct: 467 NGMDSEVSGVFKEMKRAG 484
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 156/389 (40%), Gaps = 56/389 (14%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P IV WN+ L F + G + +F +++ +P+ T + L+ A + +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCG--ETSHARL--MFDKMPQQDVATWNIMIGHLIS 166
+ + G +L N +L A G E S L M D + + T+ ++ +
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571
Query: 167 AGDVGAARDLFDSMPRRNVRSWTSVISGL----AKCGMSEEALRVFSEMEREGSRPNEVT 222
++G L + + + ++ L +KC + EA R FSE++ G P+ T
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+ N+++ +Y + + + V D M+
Sbjct: 632 L-----------------------------------NSMVSIYGRRQMVAKANGVLDYMK 656
Query: 283 ER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA-CSHVGLV 337
ER ++ +++S++ + ++ G+KP+ +++ V++A C + +
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGA 394
D R F + R+ GIVP V Y + + EEA V+ M PN + +
Sbjct: 717 DASRIFSEM--RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 395 LLGG-CRLHKN--IKLAEEAMRHLSELDP 420
++ G C+L++ KL E +R+L P
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 13/291 (4%)
Query: 177 FDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPN--EVTVVAVLVA-CAQL 233
F P + + GL + ALR F ++ + + +VVA++++ +
Sbjct: 127 FKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKE 186
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSW 289
G + ++ + +GF +VY +LI + G E VF M E T++++
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 290 SSMIVGFA-MHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR 348
+ ++ F M M G+ P+ T+ ++ C L + + F M+
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 349 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNI 405
G Y L+D+ ++ R +EA +V+ M P+ V + +L+ +
Sbjct: 307 AA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 406 KLAEEAMRHLSELDPLNDGY-YVVMSNVYAEAGKWEEVSRIRRSMKSRGVK 455
A E ++E D + Y + + + AGK E I M++ G K
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 208/483 (43%), Gaps = 57/483 (11%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+ +N + R +++ ++ +L P T + LL + I +
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP----QQDVATWNIMIGHLISAG 168
+ ++G+Q + + L+H + S A + ++M Q D+ T+ +I L G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 169 DVGAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
+ A +L + M + + + +++VI L K ++AL +F+EM+ +G RP+ T
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLR---------NVYVCNALIDMYVKCGCLEEGC 275
+++ G R+++ + L NV N+LID + K G L E
Sbjct: 280 SLISCLCNYG---------RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 276 RVFDGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHAC 331
++FD M +R++ V+++S+I GF MH M+ P+ VT+ +++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 332 SHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPN 388
V G E F M R G+V Y L+ +A + A+ V M V PN
Sbjct: 391 CKAKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 389 GVVWGALLGGCRLHKNIKLAEEAM-----RHLSELDPLNDGY-YVVMSNVYAEAGKWEEV 442
+ + LL G L KN KL E+AM S+++P D Y Y +MS +AGK E+
Sbjct: 450 IMTYNTLLDG--LCKNGKL-EKAMVVFEYLQKSKMEP--DIYTYNIMSEGMCKAGKVEDG 504
Query: 443 SRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 502
+ S+ +GVK + I G KG+ E L +KMK G +
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCK------------KGLKEEAYTLFIKMKEDGPL 552
Query: 503 PDT 505
PD+
Sbjct: 553 PDS 555
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 138/326 (42%), Gaps = 15/326 (4%)
Query: 71 DTISLFLRLRQLSILPDHFTCSFLLKA-CTISSDIVTGRIIHAYVQKLGFQSNLILQNML 129
D ++LF + I PD FT S L+ C R++ +++ N++ N L
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVTFNSL 316
Query: 130 LHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMPRRN- 184
+ +A G+ A +FD+M Q+ ++ T+N +I + A+ +F M ++
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 185 ---VRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKS 241
V ++ ++I+G K + + +F +M R G N VT ++ Q D + +
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR----ERTVVSWSSMIVGFA 297
+ + +G N+ N L+D K G LE+ VF+ ++ E + +++ M G
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 298 MHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGV 357
+ G+KP+ + + ++ GL ++ F M+ D G +P
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED-GPLPDS 555
Query: 358 EHYGCLVDLLSRAGRLEEAREVIANM 383
Y L+ R G + E+I M
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 43/228 (18%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P IV +NS + F + +F + LPD T + L+ + +V G +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP-------------------- 150
+ + G N + L+H + + +A+++F +M
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 151 -------------------QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR----S 187
+ D+ T+NIM + AG V DLF S+ + V+ +
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 188 WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
+ ++ISG K G+ EEA +F +M+ +G P+ T ++ A + GD
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 118/287 (41%), Gaps = 27/287 (9%)
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
+EA+ +F EM + P+ V +L A A++ + S E G N+Y N +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 262 IDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM 317
I+ + L + M + ++V+ +S++ GF M+ G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 318 KPNHVTFIGVLHACSHVGLV--DKGREFFTIMRRDY--GIVPGVEHYGCLVDLLSRAGRL 373
+P+ VTF ++H GL +K E ++ R G P + YG +++ L + G
Sbjct: 167 QPDTVTFTTLVH-----GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 374 EEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY----- 425
+ A ++ M + + V++ ++ ++++ ++A+ +E+D N G
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV---DDALNLFTEMD--NKGIRPDVF 276
Query: 426 -YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
Y + + G+W + SR+ M R + + ID E
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 177/392 (45%), Gaps = 43/392 (10%)
Query: 78 RLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCG 137
++ +L PD T + LL + I + + ++G++ + + L+H
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 138 ETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMP----RRNVRSWT 189
+ S A + D+M Q+ D+ T+ ++ L GD A +L + M NV ++
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
+VI L K ++AL +F+EME +G RPN +T +++ G R+++ +
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG---------RWSDAS 308
Query: 250 GFLR---------NVYVCNALIDMYVKCGCLEEGCRVFDGMRERT----VVSWSSMIVGF 296
L N+ +ALID +VK G L + ++++ M +R+ + ++SS+I GF
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPG 356
M MIR PN VT+ +++ VDKG E F M + G+V
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR-GLVGN 427
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAM- 412
Y L+ +A + A+ V M V PN + + LL G L KN KLA+ +
Sbjct: 428 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG--LCKNGKLAKAMVV 485
Query: 413 ---RHLSELDPLNDGY-YVVMSNVYAEAGKWE 440
S ++P D Y Y +M +AGKW+
Sbjct: 486 FEYLQRSTMEP--DIYTYNIMIEGMCKAGKWK 515
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 121/268 (45%), Gaps = 15/268 (5%)
Query: 42 LSHVDLAHVPA-IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKA-CT 99
L+ ++ A + A +V +++ + + D ++LF + + P+ T S L+ C
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 100 ISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVA 155
R++ +++ NL+ + L+ + G+ A ++++M ++ ++
Sbjct: 301 YGRWSDASRLLSDMIER-KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 156 TWNIMIGHLISAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEM 211
T++ +I +G A+ + + M R+ NV ++ ++I+G K ++ + +F EM
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 212 EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
+ G N VT ++ Q D + + + + G N+ N L+D K G L
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 272 EEGCRVFDGMRERT----VVSWSSMIVG 295
+ VF+ ++ T + +++ MI G
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 23/285 (8%)
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
++A+ +F M + P+ + +L A A++ + S E G N+Y N L
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 262 IDMYVKCGCLEEGCRVFDGM----RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM 317
I+ + +C L + M E +V+ +S++ GF M+ G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 318 KPNHVTFIGVLHACSHVGLVDKGREFFTIMRR--DYGIVPGVEHYGCLVDLLSRAGRLEE 375
KP+ VTF ++H + L +K E ++ R G P + YG +V+ L + G +
Sbjct: 180 KPDTVTFTTLIHG---LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 376 AREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY------Y 426
A ++ M + N V++ ++ +++ ++A+ +E++ N G Y
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH---EDDALNLFTEME--NKGVRPNVITY 291
Query: 427 VVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
+ + G+W + SR+ M R + S ID V +
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 173/387 (44%), Gaps = 24/387 (6%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD 153
L+ ++ D+ R + + ++K F + N L+ + G ++ KM +
Sbjct: 158 LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 154 VA----TWNIMIGHLISAGDVGAARDLFDSMP----RRNVRSWTSVISGLAKCGMSEEAL 205
+ T+N ++ L+SA V +A +F+ M + ++ ++ ++I G K G +++A+
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 206 RVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN--GFLRNVYVCNALID 263
+ME G +++T + ++ AC D +FG + + E + G + + +I
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQAC--YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIG 335
Query: 264 MYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKP 319
K G L EG VF+ M + V ++ +I G+A MI G KP
Sbjct: 336 GLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 395
Query: 320 NHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 379
+ VT+ V++ G V++ ++F R D G+ Y L+D L +AGR++EA +
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 380 IANMS---VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYY---VVMSNVY 433
MS + + AL+ H+ + A + + E + + Y +++S ++
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
Query: 434 AEAGKWEEVSRIRRSMKSRGVKKTPGC 460
E + EE ++ M +G+ T C
Sbjct: 515 KEH-RNEEALKLWDMMIDKGITPTAAC 540
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 181/421 (42%), Gaps = 22/421 (5%)
Query: 57 NSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQK 116
N+ +K F + G + + ++ ++++ I P +T +FL+ + + + + ++
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 117 LGFQSNLILQNMLLHLYASCGETSHA----RLMFDKMPQQDVATWNIMIGHLISAGDVGA 172
+ +++ N ++ Y G+T A R M + + D T+ MI + D G+
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 173 ARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
L+ M + ++ +++ VI GL K G E VF M R+GS+PN ++
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 229 ACAQLGDLEFG-KSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEG------CRVFDGM 281
A+ G +E + +HR + GF +V + +++ K G +EE CR FDG+
Sbjct: 371 GYAKSGSVEDAIRLLHRMID-EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR-FDGL 428
Query: 282 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGR 341
++ +SS+I G M G + + ++ A + VD+
Sbjct: 429 AINSMF-YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 342 EFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR---EVIANMSVPPNGVVWGALLGG 398
F M + G V Y L+ + + R EEA +++ + + P + AL G
Sbjct: 488 ALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 547
Query: 399 CRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTP 458
L + A + + L+ + + D M N +AG+ +E ++ + RG ++ P
Sbjct: 548 LCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERG-REVP 606
Query: 459 G 459
G
Sbjct: 607 G 607
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 10/243 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P + + + +A+ G+ D I L R+ PD T S ++ + +
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY 419
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ G N + + L+ G A +F++M ++ D +N +I
Sbjct: 420 FHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Query: 167 AGDVGAARDLFDSMPR-----RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
V A LF M + V ++T ++SG+ K +EEAL+++ M +G P
Sbjct: 480 HRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAA 539
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
A+ G + I G + + C +I+ K G ++E C++ DG+
Sbjct: 540 CFRALSTGLCLSGKVARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGI 598
Query: 282 RER 284
ER
Sbjct: 599 TER 601
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 189/440 (42%), Gaps = 23/440 (5%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
PAI +N+ L F E SLF + P+ T + L+K + R
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
++ K GF+ ++ + +++ A G+ A +FD+M ++ DV +NI+I +
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 167 AGDVGAARDLFDSMPRR-----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
D A +L+D + NV++ +ISGL+KCG ++ L+++ M++ +
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
T +++ G+++ +S+ + +V N ++ + +CG ++E ++ M
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 282 RER---TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
+ +VS++ +I G + M G + T+ +H G V+
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 339 KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGAL 395
K + G + V Y ++D L + RLEEA ++ MS V N V AL
Sbjct: 412 KALGVMQEVESSGGHLD-VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 396 LGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNV----YAEAGKWEEVSRIRRSMKS 451
+GG L ++ +L E + L E+ VV N+ +AGK+ E S + M
Sbjct: 471 IGG--LIRDSRLGEASF-FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 452 RGVKKTPGCSSITIDGVVHE 471
G K SI + G+ +
Sbjct: 528 NGWKPDLKTYSILLCGLCRD 547
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 192/447 (42%), Gaps = 54/447 (12%)
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPR----RNVRSWTSVISGLAKCGMSEEALRVF 208
D +T++ ++ +L +A + A LF+ M R +V ++T ++ K G+ E+A + F
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 209 SEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC 268
+EM G PN VT A++ A + + + + G L N+ +ALID + K
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 269 GCLEEGCRVFDGM-------------------RER-TVVSWSSMIVGFAMHXXXXXXXXX 308
G +E+ C++F+ M ER VV++ +++ GF
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLS 368
M G +PN + + ++ VG +D+ +E T M ++G + Y L+D
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM-SEHGFPATLYTYSSLIDRYF 720
Query: 369 RAGRLEEAREVIANM---SVPPNGVVWGALLGG-CRLHKNIKLAEEAMRHLSE--LDPLN 422
+ R + A +V++ M S PN V++ ++ G C++ K + A + M+ + E P N
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE-AYKLMQMMEEKGCQP-N 778
Query: 423 DGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 482
Y M + + GK E + M S+GV + ID H
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID------------HCCK 826
Query: 483 KGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKEIFLYRHSEKLALV--YGLINTKPG 540
G ++ LL +MK + T+ +E KE E L L+ G +T P
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI-----ESLGLLDEIGQDDTAPF 881
Query: 541 MPIR--IMKNLRVCEDCHTALKLVSEI 565
+ + ++ NL + AL+L+ E+
Sbjct: 882 LSVYRLLIDNLIKAQRLEMALRLLEEV 908
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 208/538 (38%), Gaps = 90/538 (16%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDI-VTGR 108
VP V + + E + + R+R S LP+ T S LL C + R
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQ----QDVATWNIMIGHL 164
+++ + + + S I N L+H Y + G+ S+A + KM + +NI+IG +
Sbjct: 359 VLNMMMMEGCYPSPKIF-NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 165 ISAGD------VGAARDLFDSMPRRNVRSWTSVISGLAKC----GMSEEALRVFSEMERE 214
D + A + M V +S +C G E+A V EM +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 215 GSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEG 274
G P+ T VL +E + + G + +VY ++D + K G +E+
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 275 CRVFDGMRE----RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
+ F+ MRE VV+++++I + M+ G PN VT+ ++
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 331 CSHVGLVDKGREFFTIM---------------RRDYGIVPGVEHYGCLVDLLSRAGRLEE 375
G V+K + F M D P V YG L+D ++ R+EE
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 376 AREVIANMSV---PPNGVVWGALLGG-CRLHKNIKLAEEAMRHLSE---------LDPLN 422
AR+++ MS+ PN +V+ AL+ G C++ K + A+E +SE L
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK-LDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 423 DGYYVVMSN--------------------VYAE-------AGKWEEVSRIRRSMKSRGVK 455
D Y+ V +Y E GK +E ++ + M+ +G +
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 456 KTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD--TSVVLLD 511
+ IDG G E +LL +M KG P+ T VL+D
Sbjct: 777 PNVVTYTAMIDGF------------GMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 160/356 (44%), Gaps = 14/356 (3%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISS-DIVTGRIIH 111
+ +++ + + G + IS+F +++ + P+ T + ++ AC +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 112 AYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP----QQDVATWNIMIGHLISA 167
+Q+ G Q + I N LL + + G AR +FD+M +QDV ++N ++ +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 168 GDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTV 223
G + A ++ MP + NV S+++VI G AK G +EAL +F EM G + V+
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 224 VAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRE 283
+L ++G E I R G ++V NAL+ Y K G +E +VF M+
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 284 RTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDK 339
V +++S++I G++ +G++ + V + ++ A GLV
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 340 GREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGAL 395
M ++ GI P V Y ++D R+ ++ + + S+P + AL
Sbjct: 568 AVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 158/357 (44%), Gaps = 44/357 (12%)
Query: 189 TSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA--VLVACAQLGDLEFGKSIHRFA 246
T +I L ++A+ + + R NE +A ++ + G + K I A
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETA 259
Query: 247 EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAM-HXX 301
G+ VY +ALI Y + G EE VF+ M+E +V+++++I
Sbjct: 260 FAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME 319
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIM--RRDYGIVPGVEH 359
M R+G++P+ +TF +L CS GL + R F M RR I V
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR---IEQDVFS 376
Query: 360 YGCLVDLLSRAGRLEEAREVIANMSVP---PNGVVWGALLGGC----RLHKNIKLAEEAM 412
Y L+D + + G+++ A E++A M V PN V + ++ G R + + L E M
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE-M 435
Query: 413 RHLS-ELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
R+L LD ++ Y + ++Y + G+ EE I R M S G+KK D V +
Sbjct: 436 RYLGIALDRVS---YNTLLSIYTKVGRSEEALDILREMASVGIKK---------DVVTYN 483
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD--TSVVLLD------MEDEQKEIF 520
+ G +G ++ +K+ +MK + +P+ T L+D + E EIF
Sbjct: 484 ALLGGYGK---QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 129/345 (37%), Gaps = 72/345 (20%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P +V +++ + FA+ G + ++LF +R L I D
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR--------------------- 444
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP----QQDVATWNIMIGHLI 165
+ N LL +Y G + A + +M ++DV T+N ++G
Sbjct: 445 --------------VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 166 SAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
G + +F M R N+ +++++I G +K G+ +EA+ +F E + G R + V
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG- 280
A++ A + G + S+ G NV N++ID + + ++ +G
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGG 610
Query: 281 --------MRERTVVSWSSMIVGFAMHXXXXXXXXXX----------------XXMIRSG 316
+ T + +I F M +
Sbjct: 611 SLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLE 670
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFFTIMR----RDYGIVPGV 357
+KPN VTF +L+ACS + +R + YG+V G+
Sbjct: 671 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGL 715
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 191/444 (43%), Gaps = 26/444 (5%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P+I+ + L A+ I+L L+ + + D +TC+ L+ SS
Sbjct: 69 LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLI 165
+ KLGF+ +++ L++ + A M ++M + DV + +I L
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 166 SAGDVGAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
G V A LFD M +R +TS+++GL G +A + M + +P+ +
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
T A++ A + G + ++ N++ +LI+ + GC++E ++F M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 282 RER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
+ VV+++S+I GF M + G+ N +T+ ++ VG
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS------VPPNGVV 391
+ +E F+ M G+ P + Y L+ L G++++A + +M V PN
Sbjct: 369 NVAQEVFSHM-VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 392 WGALLGGC----RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRR 447
+ LL G +L K + + E+ + E+D Y +++ + +AGK + +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKR--EMDIGIITYTIIIQGM-CKAGKVKNAVNLFC 484
Query: 448 SMKSRGVKKTPGCSSITIDGVVHE 471
S+ S+GVK + I G+ E
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFRE 508
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/416 (19%), Positives = 172/416 (41%), Gaps = 54/416 (12%)
Query: 10 PQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAP 69
P I T L + + +++A +++ + V++ P +V + + + + G
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQM------VEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 70 CDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNML 129
+SLF ++ I PD + L+ S + + K + ++I N L
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 130 LHLYASCGETSHARLMFDKMPQQDVA----TWNIMIGHLISAGDVGAARDLFDSMPRR-- 183
+ + G+ A ++++M + +A T+ +I G V AR +F M +
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 184 --NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKS 241
+V ++TS+I+G KC ++A+++F EM ++G N +T ++ Q+G +
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXX 301
+ G N+ N L+ G +++ +F+ M++R +
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM--------------- 418
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
G+ PN T+ +LH + G ++K F MR+ + G+ Y
Sbjct: 419 -------------DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR-EMDIGIITYT 464
Query: 362 CLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRH 414
++ + +AG+++ A + ++ V PN V + ++ G L E ++H
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG--------LFREGLKH 512
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 140/360 (38%), Gaps = 25/360 (6%)
Query: 8 LPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERG 67
+ P + T + + +N H+ A +L + + P +V + S + G
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQME------NYGIRPDVVMYTSLVNGLCNSG 226
Query: 68 APCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQN 127
D SL + + I PD T + L+ A + ++ + ++ N+
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 128 MLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMPRR 183
L++ + G AR MF M + DV + +I V A +F M ++
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 184 ----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFG 239
N ++T++I G + G A VFS M G PN T +L G ++
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK-- 404
Query: 240 KSIHRFA-----EGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV----VSWS 290
K++ F E +G N++ N L+ G LE+ VF+ MR+R + ++++
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
+I G + G+KPN VT+ ++ GL + F M+ D
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 194/475 (40%), Gaps = 64/475 (13%)
Query: 47 LAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVT 106
L + P+IV +S L + D ++L ++ ++ PD T + L
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL------------ 196
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIG 162
IH L L N + S A + D+M Q+ ++ T+ +++
Sbjct: 197 ---IHG----------LFLHN----------KASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 163 HLISAGDVGAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEMEREGSRP 218
L GD A +L + M + + + ++I L K ++AL +F EME +G RP
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 219 NEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVF 278
N VT +++ G + N+ NALID +VK G E +++
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 279 DGMRERT----VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHV 334
D M +R+ + +++S++ GF MH M+ P+ VT+ ++
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 335 GLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVV 391
V+ G E F M G+V Y L+ L G + A++V M VPP+ +
Sbjct: 414 KRVEDGTELFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 392 WGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY-YVVMSNVYAEAGKWEEVSRIRRSMK 450
+ LL G + ++ A E ++ + + D Y Y M +AGK ++ + S+
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 451 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 505
+GVK + I G+ +K + + LL KMK G +P++
Sbjct: 533 LKGVKPNVVTYNTMISGLC------------SKRLLQEAYALLKKMKEDGPLPNS 575
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 195/462 (42%), Gaps = 45/462 (9%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P+IV +N L A+ ISL ++++L I+ +T + L+ S I
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+ + KLG++ +++ + LL+ Y S A + D+M + +G+
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE---------MGY------ 186
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
R + ++T++I GL + EA+ + M + G +PN VT V+
Sbjct: 187 ------------RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----T 285
+ GD + ++ E +V + N +ID K +++ +F M +
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG-LVDKGREFF 344
VV++SS+I + MI + PN VTF ++ A G V+ + +
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP---PNGVVWGALLGGCRL 401
+++R I P + Y LV+ RL++A+++ M P+ V + L+ G
Sbjct: 355 DMIKR--SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 402 HKNIKLAEEAMRHLSELDPLND--GYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPG 459
K ++ E R +S + D Y ++ ++ + G + ++ + M S GV
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIM 471
Query: 460 CSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 501
SI +DG+ + + +A +F+ +K +K+ + Y
Sbjct: 472 TYSILLDGLCN-----NGKLEKALEVFDYMQKSEIKLDIYIY 508
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 120/292 (41%), Gaps = 12/292 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V ++S + G D L + + I P+ T + L+ A V +
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD----VATWNIMIGHLIS 166
+ + K ++ N L++ + A+ MF+ M +D V T+N +I
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
+ V +LF M R + ++T++I GL G + A +VF +M +G P+ +T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+L G LE + + + + ++Y+ +I+ K G +++G +F +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 283 ER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
+ VV++++MI G M G PN T+ ++ A
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 104/251 (41%), Gaps = 8/251 (3%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P I +NS + F +F + PD T + L+K S + G +
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ G + + L+ G+ +A+ +F +M D+ T++I++ L +
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 167 AGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
G + A ++FD M + ++ +T++I G+ K G ++ +F + +G +PN VT
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
++ L+ ++ + + +G L N N LI +++ G + MR
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Query: 283 ERTVVSWSSMI 293
V +S I
Sbjct: 603 SCRFVGDASTI 613
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 198/484 (40%), Gaps = 82/484 (16%)
Query: 47 LAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVT 106
L + P+IV +S L + D ++L ++ ++ PD T + L
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL------------ 121
Query: 107 GRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIG 162
IH + LH + S A + D+M Q+ ++ T+ +++
Sbjct: 122 ---IHG---------------LFLH-----NKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 163 HLISAGDVGAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEMEREGSRP 218
L GD+ A +L + M + + + ++I L K ++AL +F EME +G RP
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 219 NEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLR---------NVYVCNALIDMYVKCG 269
N VT +++ G R+++ + L N+ NALID +VK G
Sbjct: 219 NVVTYSSLISCLCSYG---------RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 270 CLEEGCRVFDGMRERT----VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFI 325
E ++ D M +R+ + +++S+I GF MH M+ P+ T+
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 326 GVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM-- 383
++ V+ G E F M G+V Y L+ L G + A++V M
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 384 -SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY-YVVMSNVYAEAGKWEE 441
VPP+ + + LL G + ++ A E ++ + + D Y Y M +AGK ++
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 442 VSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 501
+ S+ +GVK + I G+ +K + + LL KMK G
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLC------------SKRLLQEAYALLKKMKEDGP 496
Query: 502 IPDT 505
+PD+
Sbjct: 497 LPDS 500
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 193/462 (41%), Gaps = 45/462 (9%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P+I +N L A+ ISL ++++L I + +T + L+ S I
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGD 169
+ + KLG++ +++ + LL+ Y S A + D+M + +G+
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE---------MGY------ 111
Query: 170 VGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVA 229
R + ++T++I GL + EA+ + M + G +PN VT V+
Sbjct: 112 ------------RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 230 CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----T 285
+ GD++ ++ E +V + N +ID K +++ +F M +
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 286 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG-LVDKGREFF 344
VV++SS+I + MI + PN VTF ++ A G V+ +
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP---PNGVVWGALLGGCRL 401
+++R I P + Y L++ RL++A+++ M P+ + L+ G
Sbjct: 280 DMIKR--SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 402 HKNIKLAEEAMRHLSELDPLND--GYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPG 459
K ++ E R +S + D Y ++ ++ + G + ++ + M S GV
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIM 396
Query: 460 CSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 501
SI +DG+ + + +A +F+ +K +K+ + Y
Sbjct: 397 TYSILLDGLCN-----NGKLEKALEVFDYMQKSEIKLDIYIY 433
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 120/292 (41%), Gaps = 12/292 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V ++S + G D L + + I P+ T + L+ A V +
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD----VATWNIMIGHLIS 166
H + K ++ N L++ + A+ MF+ M +D + T+N +I
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
+ V +LF M R + ++T++I GL G + A +VF +M +G P+ +T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+L G LE + + + + ++Y+ +I+ K G +++G +F +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 283 ER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
+ VV++++MI G M G P+ T+ ++ A
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P + +N+ +K F + D LF + ++ D T + L++ D + +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ G +++ ++LL + G+ A +FD M + D+ + MI +
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
AG V DLF S+ + NV ++ ++ISGL + +EA + +M+ +G P+ T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 223 VVAVLVACAQLGD 235
++ A + GD
Sbjct: 503 YNTLIRAHLRDGD 515
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 186/421 (44%), Gaps = 19/421 (4%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P+IV + L A+ I L+ ++ L I D ++ + L+ S +
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQ----QDVATWNIMIGHLI 165
+ + KLGF+ +++ LL+ + A + D M +V +N +I L
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 166 SAGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
D+ A ++F M ++ +R ++ ++ISGL+ G +A R+ +M + PN +
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
A++ + G+L +++++ + NV+ N+LI+ + GCL + +FD M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 282 RER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
+ VV+++++I GF M G+ + T+ ++H G +
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGA 394
+ ++ F M D G+ P + Y L+D L G++E+A ++ ++ + + + +
Sbjct: 376 NVAQKVFNRM-VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 395 LLGG-CRLHKNIKLAEEAMRHLSELDPLNDGY-YVVMSNVYAEAGKWEEVSRIRRSMKSR 452
++ G CR K +K A R L+ D Y+ M + G E ++ R MK
Sbjct: 435 IIQGLCRTDK-LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 453 G 453
G
Sbjct: 494 G 494
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
VP + +NS + F G D +F + PD T + L+ S + G
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQ----QDVATWNIMIGHLI 165
+ + G + N L+H Y G+ + A+ +F++M D+ T+NI++ L
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405
Query: 166 SAGDVGAA----RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
+ G + A DL S ++ ++ +I GL + +EA +F + R+G +P+ +
Sbjct: 406 NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI 465
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFL 252
+ ++ + G + R + +GF+
Sbjct: 466 AYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V +N+ + F + D + LF + ++ D FT + L+ + + + +
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ G +++ N+LL + G+ A +M + + + D+ T+NI+I L
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 167 AGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNE 220
+ A LF S+ R+ V+ ++ ++ISGL + G+ EA ++ M+ +G P+E
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 186/446 (41%), Gaps = 35/446 (7%)
Query: 78 RLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCG 137
++ +L PD T S L+ + + + + ++G + LI N L++ G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 138 ETSHARLMFDKMP----QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR----SWT 189
+ S A L+ D+M Q + T+ ++ + +G A +L M R ++ ++
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
+I GL K G + A +F+EME +G + + + ++ G + G + R
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 250 GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV----VSWSSMIVGFAMHXXXXXX 305
+V +ALID +VK G L E + M +R + V+++S+I GF
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 306 XXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVD 365
M+ G PN TF +++ L+D G E F M G+V Y L+
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL-RGVVADTVTYNTLIQ 430
Query: 366 LLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGC----RLHKNIKLAEEAMRHLSEL 418
G+LE A+E+ M V P+ V + LL G K +++ E+ + EL
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 419 DPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDET 478
D G Y ++ + A K ++ + S+ +GVK +I I G+
Sbjct: 491 DI---GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK-------- 539
Query: 479 HPQAKGIFEMWEKLLVKMKMKGYIPD 504
KG + L KM+ G+ P+
Sbjct: 540 ----KGSLSEADLLFRKMEEDGHSPN 561
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 14/225 (6%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKA-CTISSDIVTGRI 109
P I +N + + + D + LF ++ ++ D T + L++ C + V +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLI 165
V + + +++ +LL GE A +F+K+ + D+ +NI+I +
Sbjct: 445 FQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 166 SAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
+A V A DLF S+P + +V+++ +I GL K G EA +F +ME +G PN
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGN--GFLRNVYVCNALIDM 264
T +L+ A LG+ + KS E GF + ++DM
Sbjct: 564 T-YNILIR-AHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM 606
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 123/314 (39%), Gaps = 19/314 (6%)
Query: 173 ARDLFDSM----PRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
A DLF M PR + ++ + S +A+ + L + +ME +G N T+ ++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER---- 284
C + L S G+ + + LI+ G + E + D M E
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 285 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
T+++ ++++ G ++ M+ +G +PN VT+ VL G E
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV---PPNGVVWGALLGG-C- 399
M + V+ Y ++D L + G L+ A + M + + +++ L+ G C
Sbjct: 236 RKMEERKIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 400 --RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT 457
R KL + ++ D + + + + + + GK E + + M RG+
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVV---AFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 458 PGCSSITIDGVVHE 471
+ IDG E
Sbjct: 352 TVTYTSLIDGFCKE 365
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 124/320 (38%), Gaps = 37/320 (11%)
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
++A+ +F EM R RP + + A+ + + + E G N+Y + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 262 IDMYVKCGCLEEGCRVFDGM-------RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 314
I+ +C L F M E V++S++I G + M+
Sbjct: 114 INCCCRCRKLS---LAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 315 SGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 374
G KP +T +++ G V M + G P YG ++ ++ ++G+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 375 EAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY------ 425
A E++ M + + V + ++ G L K+ L + A +E++ G+
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDG--LCKDGSL-DNAFNLFNEMEI--KGFKADIII 284
Query: 426 YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 485
Y + + AG+W++ +++ R M R + S ID V E G
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE------------GK 332
Query: 486 FEMWEKLLVKMKMKGYIPDT 505
E+L +M +G PDT
Sbjct: 333 LREAEELHKEMIQRGISPDT 352
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 194/461 (42%), Gaps = 58/461 (12%)
Query: 47 LAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTI---SSD 103
L + P IV +S L + D ++L ++ ++ PD FT + L+ + +S+
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 104 IVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP----QQDVATWNI 159
V ++ VQ+ G Q +L+ +++ G+ A + KM + DV +N
Sbjct: 207 AVA--LVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 160 MIGHLISAGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREG 215
+I L + A +LF M + +R +++S+IS L G +A R+ S+M
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 216 SRPNEVTVVAVLVACAQLGDLE-----FGKSIHRFAEG---------NGF---------- 251
PN VT A++ A + G L + + I R + NGF
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 252 -----------LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGF 296
NV + LI + K +EEG +F M +R V+++++I GF
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPG 356
M+ G+ PN +T+ +L G + K F ++R + P
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPD 502
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGGCRLHKNIKLAEEAMR 413
+ Y +++ + +AG++E+ E+ N+S V PN + + ++ G + + A+ ++
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 414 HLSELDPL-NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRG 453
+ E PL N G Y + G E + + + M+S G
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 199/487 (40%), Gaps = 63/487 (12%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P+IV +N L A+ ISL +++ L I D +T S + S + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDV 170
A + KLG++ +++ + LL+ Y S A + D+M + +
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE------------------M 182
Query: 171 GAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
G D F ++T++I GL + EA+ + +M + G +P+ VT V+
Sbjct: 183 GYKPDTF---------TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TV 286
+ GD++ S+ + E +V + N +ID K +++ +F M + V
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVG-LVDKGREFFT 345
++SS+I + MI + PN VTF ++ A G LV+ + +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 346 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR---EVIANMSVPPNGVVWGALLGGCRLH 402
+++R I P + Y L++ RL+EA+ E++ + PN V + L+ G
Sbjct: 354 MIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 403 KNIKLAEEAMRHLSELDPL-NDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
K ++ E R +S+ + N Y + + + +A + + + M S GV
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 462 SITIDG-----------VVHEFVAGDETHP-------------QAKGIFEMWEKLLVKMK 497
+I +DG VV E++ P +A + + WE L +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE-LFCNLS 530
Query: 498 MKGYIPD 504
+KG P+
Sbjct: 531 LKGVSPN 537
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V +++ +K F + + + LF + Q ++ + T + L+ + D +++
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ +G N++ N+LL G+ + A ++F+ + + D+ T+NIMI +
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
AG V +LF ++ + NV ++ ++ISG + G EEA + +M+ +G PN T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
++ A + GD E + + GF
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 33/290 (11%)
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
++A+ +F +M + P+ V +L A A++ E S+ + G ++Y +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 262 IDMYVKCGCLEEGCRVFDGM----RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM 317
I+ + + L V M E +V+ SS++ G+ M+ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 318 KPNHVTFIGVLH-------ACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRA 370
KP+ TF ++H A V LVD+ +++R G P + YG +V+ L +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQ------MVQR--GCQPDLVTYGTVVNGLCKR 236
Query: 371 GRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY-- 425
G ++ A ++ M + + V++ ++ G +K++ ++A+ +E+D N G
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM---DDALNLFTEMD--NKGIRP 291
Query: 426 ----YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
Y + + G+W + SR+ M R + S ID V E
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 210/512 (41%), Gaps = 77/512 (15%)
Query: 20 HATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRL 79
H S N + A LL+K S D A + + W + +FF R C I+L
Sbjct: 40 HHLSANFTPEAASNLLLK-----SQNDQALILKFLNWANPHQFFTLR---CKCITL---- 87
Query: 80 RQLSILPDHFTCSF-LLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGE 138
H F L K I ++ V + + L F+S L Y C
Sbjct: 88 --------HILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKS-------LQETYDLCYS 132
Query: 139 TS---------HARL-MFDK-------------MPQQDVATWNIMIGHLI-SAGDVGAAR 174
TS ++RL + DK MP V ++N ++ I S ++ A
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMP--GVLSYNAVLDATIRSKRNISFAE 190
Query: 175 DLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVAC 230
++F M NV ++ +I G G + AL +F +ME +G PN VT ++
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 231 AQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV---- 286
+L ++ G + R G N+ N +I+ + G ++E V M R
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 287 VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI 346
V+++++I G+ M+R G+ P+ +T+ ++H+ G +++ EF
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 347 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGGCRLHK 403
MR G+ P Y LVD S+ G + EA V+ M+ P+ V + AL+ G +
Sbjct: 371 MRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 404 NIKLAEEAMRHLSE--LDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCS 461
++ A + + E L P Y V+S + + +E R++R M +G+K
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSG-FCRSYDVDEALRVKREMVEKGIKP----D 484
Query: 462 SITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 493
+IT ++ F T K +++E++L
Sbjct: 485 TITYSSLIQGFCEQRRT----KEACDLYEEML 512
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 165/398 (41%), Gaps = 18/398 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P + +N ++ F G ++LF ++ LP+ T + L+ I G +
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ G + NLI N++++ G + +M ++ D T+N +I
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
G+ A + M R +V ++TS+I + K G A+ +M G PNE T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
++ +Q G + + R NGF +V NALI+ + G +E+ V + M+
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 283 ER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
E+ VVS+S+++ GF M+ G+KP+ +T+ ++
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 339 KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGAL 395
+ + + M R G+ P Y L++ G LE+A ++ M V P+ V + L
Sbjct: 503 EACDLYEEMLR-VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 396 LGGCRLHKNIKLAEEAMRHL--SELDPLNDGYYVVMSN 431
+ G + A+ + L E P + Y+ ++ N
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 152/366 (41%), Gaps = 23/366 (6%)
Query: 122 NLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLF 177
N+ N+L+ + G A +FDKM + +V T+N +I + L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 178 DSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
SM + N+ S+ VI+GL + G +E V +EM R G +EVT ++ +
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV----SW 289
G+ +H +G +V +LI K G + D MR R + ++
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
++++ GF+ M +G P+ VT+ +++ G ++ M+
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK- 442
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGC----RLH 402
+ G+ P V Y ++ R+ ++EA V M + P+ + + +L+ G R
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 403 KNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSS 462
+ L EE +R L P ++ Y + N Y G E+ ++ M +GV S
Sbjct: 503 EACDLYEEMLR--VGLPP-DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 463 ITIDGV 468
+ I+G+
Sbjct: 560 VLINGL 565
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 187/457 (40%), Gaps = 35/457 (7%)
Query: 71 DTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLL 130
D++ LF + Q LP S LL A + + +Q LG NL N+LL
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 131 HLYASCGETSHARLMFDKMP----QQDVATWNIMIGHLISAGDVGAARDLFDSMP----R 182
+ + C + S A KM + + T+ ++ V A +FD M +
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 183 RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSI 242
NV + ++I GL K + AL + + ME++G P+ VT +++ G +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT----VVSWSSMIVGFAM 298
+V+ NALID VK G + E ++ M R+ +V++S +I G M
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 299 HXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVE 358
+ M+ G P+ VT+ +++ V+ G + F M + G+V
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR-GVVRNTV 362
Query: 359 HYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHL 415
Y L+ RAG+L A E+ M V PN + + LL G L N K+ E+A+ L
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG--LCDNGKI-EKALVIL 419
Query: 416 SELDPLNDGYYVVMSNV----YAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
+++ +V N+ +AG+ + I S+ +G+ + + G+
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK- 478
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 508
KG+ + L KMK G +P+ V
Sbjct: 479 -----------KGLRREADALFRKMKEDGILPNECYV 504
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 109/283 (38%), Gaps = 12/283 (4%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V +NS + G D + + + I PD FT + L+ AC +
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ + + +++ ++L++ A MF M + DV T++I+I
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 167 AGDVGAARDLFDSMPR----RNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
+ V LF M + RN ++T +I G + G A +F M G PN +T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
+L G +E I + NG ++ N +I K G + + ++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 283 ERTVV----SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNH 321
+ ++ ++++M++G M G+ PN
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 183/427 (42%), Gaps = 27/427 (6%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P+IV +N L + ISL ++ L I D +T + ++ + I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQ----QDVATWNIMIGHLIS 166
+ KLG++ + + L++ + S A + DKM + D+ +N +I L
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 167 AGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
V A D F + R+ +R ++T++++GL +A R+ S+M ++ PN +T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
A+L A + G + K + ++ ++LI+ ++E ++FD M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 283 ER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
+ VVS++++I GF M + G+ N VT+ ++ G VD
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 339 KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGAL 395
K +EFF+ M +GI P + Y L+ L G LE+A + +M + + V + +
Sbjct: 383 KAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 396 LGG-CRLHKNIKLAEEAMR-----HLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSM 449
+ G C+ K EEA L L P Y +MS + + G EV + M
Sbjct: 442 IRGMCKTGK----VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK-GLLHEVEALYTKM 496
Query: 450 KSRGVKK 456
K G+ K
Sbjct: 497 KQEGLMK 503
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 176/421 (41%), Gaps = 38/421 (9%)
Query: 117 LGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISA----GDVGA 172
LG +++L N++++ + C + S A + KM + + IG L++ V
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 173 ARDLFDSMP----RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLV 228
A L D M + ++ ++ ++I L K +A F E+ER+G RPN VT A++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 229 ACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT--- 285
+ NV +AL+D +VK G + E +F+ M +
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 286 -VVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF 344
+V++SS+I G +H M+ G + V++ +++ V+ G + F
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGGC-- 399
M + G+V Y L+ +AG +++A+E + M + P+ + LLGG
Sbjct: 354 REMSQ-RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 400 --RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKK- 456
L K + + E+ + +LD + Y + + GK EE + S+ +G+K
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVT---YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 457 ----TPGCSSITIDGVVHEFVAGDETHPQ----------AKGIFEMWEKLLVKMKMKGYI 502
T S + G++HE A Q + G + +L+ KM GY
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYA 529
Query: 503 P 503
P
Sbjct: 530 P 530
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 145/352 (41%), Gaps = 49/352 (13%)
Query: 47 LAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACT------- 99
L + P V S + F R D +SL ++ ++ PD + ++ +
Sbjct: 149 LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 100 ------------ISSDIVT-----------------GRIIHAYVQKLGFQSNLILQNMLL 130
I ++VT R++ ++K N+I + LL
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALL 267
Query: 131 HLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMPRR--- 183
+ G+ A+ +F++M + D+ T++ +I L + A +FD M +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 184 -NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSI 242
+V S+ ++I+G K E+ +++F EM + G N VT ++ Q GD++ +
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 243 HRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAM 298
+ G +++ N L+ G LE+ +F+ M++R +V+++++I G
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 299 HXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
+ G+KP+ VT+ ++ GL+ + +T M+++
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V +N+ + F + D + LF + Q ++ + T + L++ + D+ + +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAG 168
+ G ++ N+LL GE A ++F+ M ++ D+ T+ +I + G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 169 DVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTV 223
V A LF S+ + ++ ++T+++SGL G+ E ++++M++EG N+ T+
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 202/507 (39%), Gaps = 69/507 (13%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P+IV +N L A+ ISL +++ L I D +T S + S + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP-------------------- 150
A + KLG++ +++ + LL+ Y S A + D+M
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 151 -------------------QQDVATWNIMIGHLISAGDVGAARDLFDSMP----RRNVRS 187
Q D+ T+ ++ L GD+ A +L + M + NV
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 188 WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAE 247
+ ++I L K E A+ +F+EME +G RPN VT +++ G +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 248 GNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV----VSWSSMIVGFAMHXXXX 303
NV NALID + K G L E ++ + M +R++ ++++ +I GF MH
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 304 XXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCL 363
M+ PN T+ +++ V+ G E F M + G+V Y +
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ-RGLVGNTVTYTTI 439
Query: 364 VDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHL--SEL 418
+ +AG + A+ V M VP + + + LL G + + A ++L SE+
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 419 DPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDET 478
+ LN Y M +AGK E + S+ +K + I G+
Sbjct: 500 E-LNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLC--------- 546
Query: 479 HPQAKGIFEMWEKLLVKMKMKGYIPDT 505
+K + + + L KMK G +P++
Sbjct: 547 ---SKRLLQEADDLFRKMKEDGTLPNS 570
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 183/431 (42%), Gaps = 55/431 (12%)
Query: 47 LAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTI---SSD 103
L + P IV +S L + D ++L ++ ++ PD FT + L+ + +S+
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 104 IVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP----QQDVATWNI 159
V ++ VQ+ G Q +L+ +++ G+ A + +KM + +V +N
Sbjct: 207 AVA--LVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 160 MIGHLISAGDVGAARDLFDSMP----RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREG 215
+I L V A DLF M R NV ++ S+I+ L G +A R+ S M +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 216 SRPNEVTVVAVLVACAQLGDLEFGKSIH-------------------------------- 243
PN VT A++ A + G L + +H
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 244 ---RFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGF 296
+F L N+ N LI+ + KC +E+G +F M +R V+++++I GF
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPG 356
M+ + + + +T+ +LH G +D F +++ +
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS-EMELN 502
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLS 416
+ Y +++ + +AG++ EA ++ ++S+ P+ V + ++ G + ++ A++ R +
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Query: 417 ELDPL-NDGYY 426
E L N G Y
Sbjct: 563 EDGTLPNSGTY 573
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P I +N+ + F + D + LF + Q ++ + T + +++ + D + ++
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLI 165
+ + ++++ ++LLH S G+ A ++F + + ++ +N MI +
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 166 SAGDVGAARDLFDSMP-RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
AG VG A DLF S+ + +V ++ ++ISGL + +EA +F +M+ +G+ PN T
Sbjct: 515 KAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDM 264
++ A + D + + +GF+ + + + +M
Sbjct: 575 TLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM 614
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 145/349 (41%), Gaps = 45/349 (12%)
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNAL 261
++A+ +F +M + P+ V +L A A++ E S+ + G ++Y +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 262 IDMYVKCGCLEEGCRVFDGM----RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGM 317
I+ + + L V M E +V+ SS++ G+ M+ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 318 KPNHVTFIGVLH-------ACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRA 370
KP+ TF ++H A V LVD+ +++R G P + YG +V+ L +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQ------MVQR--GCQPDLVTYGTVVNGLCKR 236
Query: 371 GRLEEAREVIANMS---VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSE--LDPLNDGY 425
G ++ A ++ M + N V++ ++ ++++++A + + + P N
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP-NVVT 295
Query: 426 YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 485
Y + N G+W + SR+ +M ++K + +T + ++ F +G
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNM----LEKKINPNVVTFNALIDAFF--------KEGK 343
Query: 486 FEMWEKLLVKMKMKGYIPDTSVVLLDME--------DEQKEIFLYRHSE 526
EKL +M + PDT L + DE K++F + S+
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 152/342 (44%), Gaps = 28/342 (8%)
Query: 156 TWNIMIGHLISAGDVGAARDLFDSMPRRNVRS----WTSVISGLAKCGMSEEALRVFSEM 211
T+ +++ + G + A LFD M R + S +TS+IS + G + A +F E+
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 212 EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCL 271
+G P+ T A++ ++G++ + + + G V N LID Y + G +
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 272 EEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGV 327
+E ++D M ++ V + +++ F M+ G+K + V++ +
Sbjct: 416 DEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNL 475
Query: 328 LHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS--- 384
+ G V++ + F M G+ P Y ++ + G+++EAR++ ANM
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSK-GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 385 VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELD----PLNDGYYVVMSNVYAEAGKWE 440
+ P+ + +L+ G + N+ +EAMR SE+ N Y VM + ++AGK +
Sbjct: 535 MDPDSYTYTSLIHGECIADNV---DEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSD 591
Query: 441 EVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 482
E + MK +G TID V+ + G P+
Sbjct: 592 EAFGLYDEMKRKG---------YTIDNKVYTALIGSMHSPET 624
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 129/330 (39%), Gaps = 21/330 (6%)
Query: 16 THLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISL 75
T L + +N + A L + D+ +++ WN C K +R L
Sbjct: 298 TLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN-CRKGNMKRA-----FLL 351
Query: 76 FLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYAS 135
F L + + P +T L+ ++ I+ +Q G ++ N L+ Y
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCR 411
Query: 136 CGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR----S 187
G A +++D M Q+ DV T N + A+ M V+ S
Sbjct: 412 KGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVS 471
Query: 188 WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAE 247
+T++I K G EEA R+F EM +G +PN +T ++ A + G ++ + + E
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 248 GNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM----RERTVVSWSSMIVGFAMHXXXX 303
NG + Y +LI ++E R+F M ++ V+++ MI G +
Sbjct: 532 ANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSD 591
Query: 304 XXXXXXXXMIRSGMKPN---HVTFIGVLHA 330
M R G + + IG +H+
Sbjct: 592 EAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 139/340 (40%), Gaps = 21/340 (6%)
Query: 174 RDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQL 233
R + DS + V S T V+ GL + G E++ ++ E +G +P T ++ A +
Sbjct: 213 RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVS----W 289
D + + + + +G + N L+++ VK G + + ++FD MRER + S +
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+S+I + G+ P+ T+ ++ VG + M+
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS 392
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP--PNGVVWGALLGGC--RLHKNI 405
G+ + L+D R G ++EA + M V + C RL +
Sbjct: 393 K-GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 406 KLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITI 465
+ + R + L+ Y + +VY + G EE R+ M S+GV+ ++IT
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP----NAITY 507
Query: 466 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 505
+ +++ + +G + KL M+ G PD+
Sbjct: 508 NVMIYAYC--------KQGKIKEARKLRANMEANGMDPDS 539
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 163/423 (38%), Gaps = 58/423 (13%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P++ N+ L + G S + + I PD T + L+ +
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
++K G+ ++ N +LH Y G A + D M + DV T+N++I L
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 167 AGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
+ + L M +R N ++ ++I+G + G A ++ +EM G PN VT
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
NALID ++ G +E ++F M
Sbjct: 376 F-----------------------------------NALIDGHISEGNFKEALKMFYMME 400
Query: 283 ERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
+ + VS+ ++ G + M R+G+ +T+ G++ G +D
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 339 KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV---IANMSVPPNGVVWGAL 395
+ M +D GI P + Y L++ + GR + A+E+ I + + PNG+++ L
Sbjct: 461 EAVVLLNEMSKD-GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 396 LGGC----RLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKS 451
+ C L + I++ E + D + V+ +AGK E R M S
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFT---FNVLVTSLCKAGKVAEAEEFMRCMTS 576
Query: 452 RGV 454
G+
Sbjct: 577 DGI 579
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 150/367 (40%), Gaps = 17/367 (4%)
Query: 75 LFLR-LRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLY 133
L LR +R+ I P+ T + L+ + ++ + + G N + N L+ +
Sbjct: 324 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 134 ASCGETSHARLMFDKMPQQDVA----TWNIMIGHLISAGDVGAARDLFDSMPRRNV---- 185
S G A MF M + + ++ +++ L + AR + M R V
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 186 RSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRF 245
++T +I GL K G +EA+ + +EM ++G P+ VT A++ ++G + K I
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 246 AEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM----RERTVVSWSSMIVGFAMHXX 301
G N + + LI + GCL+E R+++ M R +++ ++
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
M G+ PN V+F +++ + G K F M + G P YG
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK-VGHHPTFFTYG 622
Query: 362 CLVDLLSRAGRLEEAREVIANMSVPP---NGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
L+ L + G L EA + + ++ P + V++ LL N+ A + +
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 419 DPLNDGY 425
L D Y
Sbjct: 683 SILPDSY 689
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/435 (17%), Positives = 164/435 (37%), Gaps = 58/435 (13%)
Query: 27 HLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILP 86
HL++A L +A + VD V +N+ L + G +SLF + Q SILP
Sbjct: 633 HLREAEKFLKSLHAVPAAVD------TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Query: 87 DHFTCSFLL----------------KACTISSDIVTGRIIHA------------------ 112
D +T + L+ K +++ ++++
Sbjct: 687 DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 746
Query: 113 --YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ LG +++ N ++ Y+ G+ + +M Q ++ T+NI++
Sbjct: 747 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 806
Query: 167 AGDVGAARDLFDSMPRRNV----RSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
DV + L+ S+ + + S++ G+ + M E L++ G + T
Sbjct: 807 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 866
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
++ C G++ + + + G + C+A++ + + +E V M
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 283 ERTVV----SWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
++ + + +I G MI + P +V ++ A + G D
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 339 KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA---REVIANMSVPPNGVVWGAL 395
+ M + +VP + + L+ L + G + EA R V++N + + V + L
Sbjct: 987 EATLLLRFMLK-MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045
Query: 396 LGGCRLHKNIKLAEE 410
+ G ++ LA E
Sbjct: 1046 ITGLCAKGDMALAFE 1060
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 183/457 (40%), Gaps = 55/457 (12%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P ++ +N+ L + G ++L +++ +I T + L+ + + + R
Sbjct: 235 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQDV----ATWNIMIGHLI 165
H +++ GF N L+ Y G A + D+M + +T+NI I L
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354
Query: 166 SAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
G + AR+L SM +V S+ +++ G K G EA +F ++ P+ VT
Sbjct: 355 DFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
++ + G+LE + + +V L+ +VK G L V+D M +
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 286 V----VSWSSMIVG----------FAMHXXXXXX-------------------------- 305
+ ++++ VG F +H
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 306 XXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVD 365
+ R G+ P+HVT+ V+ G R + M R + P V Y L+
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVITYFVLIY 593
Query: 366 LLSRAGRLEEAREVIANMS---VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELD--- 419
++AGRLE+A + M V PN + ALL G NI +EA R+L +++
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI---DEAYRYLCKMEEEG 650
Query: 420 -PLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVK 455
P N Y ++ + + KWEEV ++ + M + ++
Sbjct: 651 IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 189/430 (43%), Gaps = 30/430 (6%)
Query: 47 LAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKAC---TISSD 103
L + P+IV NS L F + ++L ++ ++ PD T + L+ +S+
Sbjct: 139 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198
Query: 104 IVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP----QQDVATWNI 159
V ++ V K G Q +L+ +++ GE A + +KM + DV +N
Sbjct: 199 AVA--LVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 160 MIGHLISAGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREG 215
+I L + A DLF+ M + ++ ++ +IS L G +A R+ S+M +
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 216 SRPNEVTVVAVLVACAQLGDL-EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEG 274
P+ V A++ A + G L E K + +V N LI + K +EEG
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 275 CRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHA 330
VF M +R V+++++I GF M+ G+ P+ +T+ +L
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 331 CSHVGLVDKGREFFTIM-RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VP 386
+ G V+ F M +RD + + Y +++ L +AG++E+ ++ ++S V
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKL--DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Query: 387 PNGVVWGALLGG-CRLHKNIKLAEEAMR-HLSELDPL-NDGYYVVMSNVYAEAGKWEEVS 443
PN V + ++ G CR K +K +A+ + E PL N G Y + G +
Sbjct: 494 PNVVTYTTMMSGFCR--KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 444 RIRRSMKSRG 453
+ + M+S G
Sbjct: 552 ELIKEMRSCG 561
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 158/387 (40%), Gaps = 20/387 (5%)
Query: 10 PQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAP 69
P T L H Q++ +A AL+ + V P +V + + + +RG P
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERM------VVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 70 CDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNML 129
++L ++ + I D + ++ + + ++ G + ++ N L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 130 LHLYASCGETSHA-RLMFDKMPQQ---DVATWNIMIGHLISAGDVGAARDLFDSMPRR-- 183
+ + G S A RL+ D + + D+ +N +I + G + A L+D M +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 184 ---NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGK 240
+V ++ ++I G K EE + VF EM + G N VT ++ Q D + +
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 241 SIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGF 296
+ + +G ++ N L+D G +E VF+ M++R +V++++MI
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 297 AMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPG 356
+ G+KPN VT+ ++ GL ++ F M+ D G +P
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED-GPLPN 530
Query: 357 VEHYGCLVDLLSRAGRLEEAREVIANM 383
Y L+ R G + E+I M
Sbjct: 531 SGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/503 (20%), Positives = 187/503 (37%), Gaps = 92/503 (18%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P+IV ++ L A+ ISL +++ L I + +T S + S + I
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMP-------------------- 150
+ KLG+ +++ N LL+ + S A + D+M
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 151 -------------------QQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRS---- 187
Q D+ T+ +I L G+ A +L + M + + +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 188 WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAE 247
+ ++I GL K ++A +F++ME +G +P+ T ++ G +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 248 GNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT-----VVSWSSMIVGFAMHXXX 302
++ NALID +VK G L E +++D M + VV+++++I GF +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 303 XXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGC 362
M + G+ N VT+ ++H D + F M D G+ P + Y
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNI 431
Query: 363 LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLN 422
L+D L G +E A V M + +LD +
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQ----------------------------KRDMKLDIVT 463
Query: 423 DGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 482
Y M +AGK E+ + S+ +GVK + + G
Sbjct: 464 ---YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR------------ 508
Query: 483 KGIFEMWEKLLVKMKMKGYIPDT 505
KG+ E + L V+MK G +P++
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNS 531
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 191/445 (42%), Gaps = 26/445 (5%)
Query: 30 QARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHF 89
Q+++L + + VD VP +N L F + S F + +L D +
Sbjct: 106 QSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVL-DVY 164
Query: 90 TCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKM 149
+ L+K C + +I + + + GF N+++ L+ GE A+ +F +M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 150 PQQDVA----TWNIMIGHLISAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMS 201
+ + T+ ++I L G ++++ M N+ ++ V++ L K G +
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 202 EEALRVFSEMEREGSRPNEVTVVAVLVA-CAQLGDLEFGKSIHRFAEGNGFLRNVYVCNA 260
++A +VF EM G N VT ++ C ++ E K + + + +G N+ N
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLITYNT 343
Query: 261 LIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSG 316
LID + G L + + ++ R ++V+++ ++ GF M G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 376
+KP+ VT+ ++ + ++K + M + G+VP V Y L+ G++ EA
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSM-EELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 377 REVIANM---SVPPNGVVWGAL-LGGCR---LHKNIKLAEEAMRHLSELDPLNDGYYVVM 429
+ +M + PN V++ + LG C+ ++ +KL +E EL P N Y M
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK--ELAP-NVASYRYM 519
Query: 430 SNVYAEAGKWEEVSRIRRSMKSRGV 454
V + K +E R+ M G+
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGI 544
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 158/355 (44%), Gaps = 21/355 (5%)
Query: 153 DVATWNIMIGHLISAGDVGAARDLFDSMPR----RNVRSWTSVISGLAKCGMSEEALRVF 208
DV ++ I+I AG++ + DL + NV +T++I G K G E+A +F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 209 SEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC 268
EM + G NE T ++ + G + G ++ + +G N+Y N +++ K
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 269 GCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTF 324
G ++ +VFD MRER +V+++++I G M G+ PN +T+
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 325 IGVLHACSHVGLVDKGREFFTIMR--RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 382
++ VG + K ++ R + G+ P + Y LV R G A +++
Sbjct: 342 NTLIDGFCGVGKLGKA---LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 383 MS---VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY-YVVMSNVYAEAGK 438
M + P+ V + L+ N++ A + + EL + D + Y V+ + + G+
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 439 WEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 493
E SR+ +SM V+K + + + ++ + ++ K + EM EK L
Sbjct: 459 MNEASRLFKSM----VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 152/355 (42%), Gaps = 42/355 (11%)
Query: 100 ISSDIVTGRIIHAYVQKLGFQ-----------SNLILQN-----MLLHLYASC----GET 139
+ SD T I++ + K F ++I QN LL+ Y C GE
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 140 SHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMPRR----NVRSWTSV 191
R MF+++ + D +++I+I LI AG +LF SM + + R++ V
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 192 ISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGF 251
I G KCG +A ++ EM+ +G P VT +V+ A++ L+ + A+
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 252 LRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXX 307
NV + ++LID + K G ++E + + + ++ + +W+S++
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 308 XXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLL 367
M PN VT+ +++ V +K F+ M++ G+ P Y ++ L
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGL 772
Query: 368 SRAGRLEEAREVI----ANMSVPP----NGVVWGALLGGCRLHKNIKLAEEAMRH 414
++AG + EA + AN VP N ++ G L G R L EE R
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG-LSNGNRAMDAFSLFEETRRR 826
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 158/404 (39%), Gaps = 41/404 (10%)
Query: 14 KPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFFAERGAPCDTI 73
K LD A HL++ R VP +N+ + + G +
Sbjct: 285 KANRLDEAVEMFEHLEKNR----------------RVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 74 SLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYV----QKLGFQSNLILQNML 129
SL R R +P S + C ++ G++ A K NL N+L
Sbjct: 329 SLLERQRAKGSIP-----SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNIL 383
Query: 130 LHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMPRR-- 183
+ + G+ A + D M + +V T NIM+ L + + A +F+ M +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 184 --NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKS 241
+ ++ S+I GL K G ++A +V+ +M R N + +++ G E G
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 242 IHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVV----SWSSMIVGFA 297
I++ ++ + N +D K G E+G +F+ ++ R V S+S +I G
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 298 MHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGV 357
M G + + V+ G V+K + M+ G P V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK-GFEPTV 622
Query: 358 EHYGCLVDLLSRAGRLEEAR---EVIANMSVPPNGVVWGALLGG 398
YG ++D L++ RL+EA E + + N V++ +L+ G
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 180/447 (40%), Gaps = 32/447 (7%)
Query: 46 DLAHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIV 105
+L + P + + + ++ FA+ G +SL ++ S+ D +L I S
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD-----IVLYNVCIDSFGK 250
Query: 106 TGRIIHAY-----VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD----VAT 156
G++ A+ ++ G + + + ++ + A MF+ + +
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 157 WNIMIGHLISAGDVGAARDLFD------SMPRRNVRSWTSVISGLAKCGMSEEALRVFSE 210
+N MI SAG A L + S+P +V ++ +++ L K G +EAL+VF E
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIP--SVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 211 MEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGC 270
M+++ + PN T ++ + G L+ + + G NV N ++D K
Sbjct: 369 MKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427
Query: 271 LEEGCRVFDGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIG 326
L+E C +F+ M + +++ S+I G M+ S + N + +
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 327 VLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR---EVIANM 383
++ + G + G + + M + P ++ +D + +AG E+ R E I
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMI-NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Query: 384 SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELD-PLNDGYYVVMSNVYAEAGKWEEV 442
P+ + L+ G E + E L+ Y ++ + + + GK +
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 443 SRIRRSMKSRGVKKTPGCSSITIDGVV 469
++ MK++G + T IDG+
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 165/412 (40%), Gaps = 38/412 (9%)
Query: 114 VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGD 169
+Q+LG++ + L L+ +A G A + D+M D+ +N+ I G
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
Query: 170 VGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
V A F + ++ ++TS+I L K +EA+ +F +E+ P
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERT 285
+++ G + S+ G + +V N ++ K G ++E +VF+ M++
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 286 VVSWSSMIVGFAM---HXXXXXXXXXXXXMIRSGMKPNHVTF-IGVLHACSHVGLVDKGR 341
+ S+ + M M ++G+ PN T I V C L D+
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL-DEAC 432
Query: 342 EFFTIMRRDYGI-VPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLG 397
F M DY + P + L+D L + GR+++A +V M N +V+ +L+
Sbjct: 433 AMFEEM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 398 GCRLHKNIKLAEEAMRHLSELDPLNDGYYVVMSNVYAE----AGKWEEVSRIRRSMKSRG 453
H E+ + ++ N + + N Y + AG+ E+ + +K+R
Sbjct: 491 NFFNHGR---KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 454 VKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 505
SI I G++ A +ET+ +L MK +G + DT
Sbjct: 548 FVPDARSYSILIHGLIKAGFA-NETY-----------ELFYSMKEQGCVLDT 587
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 187/448 (41%), Gaps = 30/448 (6%)
Query: 48 AHVPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTG 107
+VP I+P + ++ F G + L +PD T + + IS G
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM-----ISGYCKAG 186
Query: 108 RIIHAY--VQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD----VATWNIMI 161
I +A + ++ +++ N +L G+ A + D+M Q+D V T+ I+I
Sbjct: 187 EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246
Query: 162 GHLISAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSR 217
VG A L D M R +V ++ +++G+ K G +EA++ ++M G +
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 218 PNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRV 277
PN +T +L + G + + GF +V N LI+ + G L +
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 278 FDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSH 333
+ M + +S++ ++ GF M+ G P+ VT+ +L A
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 334 VGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGV 390
G V+ E + G P + Y ++D L++AG+ +A +++ M + P+ +
Sbjct: 427 DGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 391 VWGALLGGCRLHKNIKLAEEAMRHLSELDPLN-DGYYVVMSNVYAEAGKWEEVSR---IR 446
+ +L+GG + +EA++ E + + V +++ K + R
Sbjct: 486 TYSSLVGGLSREGKV---DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 447 RSMKSRGVKKTPGCSSITIDGVVHEFVA 474
M +RG K +I I+G+ +E +A
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMA 570
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 154/390 (39%), Gaps = 49/390 (12%)
Query: 39 NAPLSHVDLAHV-PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKA 97
N LS +D V P +V +N+ L+ + G + + R+ Q PD T + L++A
Sbjct: 189 NNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 98 CTISS-------------------DIVT-----------GRIIHAY-----VQKLGFQSN 122
S D+VT GR+ A + G Q N
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 123 LILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFD 178
+I N++L S G A + M ++ V T+NI+I L G +G A D+ +
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 179 SMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLG 234
MP+ N S+ ++ G K + A+ M G P+ VT +L A + G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 235 DLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV----VSWS 290
+E I G + N +ID K G + ++ D MR + + +++S
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 291 SMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRD 350
S++ G + R G++PN VTF ++ D+ +F M +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM-IN 547
Query: 351 YGIVPGVEHYGCLVDLLSRAGRLEEAREVI 380
G P Y L++ L+ G +EA E++
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 4/196 (2%)
Query: 195 LAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRN 254
+ + G EE + M G+ P+ + ++ +LG I EG+G + +
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 255 VYVCNALIDMYVKCGCLEEGCRVFDGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 313
V N +I Y K G + V D M VV++++++ M+
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 314 RSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 373
+ P+ +T+ ++ A V + M RD G P V Y LV+ + + GRL
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 374 EEAREVIANMSVPPNG 389
+EA + + +M P +G
Sbjct: 291 DEAIKFLNDM--PSSG 304
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 121/556 (21%), Positives = 221/556 (39%), Gaps = 78/556 (14%)
Query: 4 LCSTLPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFF 63
LC P + L + +++A L+ + VD P + +N+ +
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV------VDFGVSPNLFVYNALIDSL 377
Query: 64 AERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNL 123
+ + LF R+ ++ + P+ T S L+ + T + G + ++
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 124 ILQNMLLHLYASCGETSHAR----LMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDS 179
N L++ + G+ S A M +K + V T+ ++G S G + A L+
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 180 MPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
M + ++ ++T+++SGL + G+ +A+++F+EM +PN VT ++ + GD
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 236 L----EFGKS----------------IH------RFAEGNGFLRNVYVCN---------A 260
+ EF K IH + +E F+ ++ N
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 261 LIDMYVKCGCLEEGCRVFDGMRERTV----VSWSSMIVGFAMHXXXXXXXXXXXXMIRSG 316
L+ + + G LEE V M +R V V + +I G H M G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 317 MKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 376
+KP+ V + ++ A S G + + +M + G VP Y +++ L +AG + EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 377 REVIANM---SVPPNGVVWGALL-----GGCRLHKNIKLAEEAMRHLSELDPLNDGYYVV 428
+ + M S PN V +G L G + K ++L ++ L N Y +
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA----NTATYNM 792
Query: 429 MSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 488
+ + G+ EE S + M GV +P C IT +++E ++ K E+
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGV--SPDC--ITYTTMINELCRRND----VKKAIEL 844
Query: 489 WEKLLVKMKMKGYIPD 504
W M KG PD
Sbjct: 845 WN----SMTEKGIRPD 856
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 142/343 (41%), Gaps = 22/343 (6%)
Query: 184 NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIH 243
N+ + ++I L K EA +F M + G RPN+VT ++ + G L+ S
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 244 RFAEGNGFLRNVYVCNALIDMYVKCGCLE--EG--CRVFDGMRERTVVSWSSMIVGFAMH 299
G +VY N+LI+ + K G + EG + + E TVV+++S++ G+
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 300 XXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEH 359
M G+ P+ TF +L GL+ + F M ++ + P
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVT 544
Query: 360 YGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGGCRLHKNIKLAEEAMRHLS 416
Y +++ G + +A E + M+ + P+ + L+ G L A+ + L
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 417 ELD-PLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAG 475
+ + LN+ Y + + + GK EE + + M RGV C + IDG +
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK----- 659
Query: 476 DETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDMEDEQKE 518
H K F LL +M +G PD V+ M D + +
Sbjct: 660 ---HKDRKLFF----GLLKEMHDRGLKPD-DVIYTSMIDAKSK 694
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 165/423 (39%), Gaps = 23/423 (5%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRII 110
P +V + S + + +G + L+ + I P +T + LL + I +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 111 HAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLIS 166
+ + + N + N+++ Y G+ S A +M ++ D ++ +I L
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 167 AGDVGAARDLFDSMPRRNVR----SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVT 222
G A+ D + + N +T ++ G + G EEAL V EM + G + V
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 223 VVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR 282
++ + D + + + G + + ++ID K G +E ++D M
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 283 ER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVD 338
V+++++I G M PN VT+ L + G VD
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVD 768
Query: 339 --KGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWG 393
K E + + G++ Y L+ R GR+EEA E+I M V P+ + +
Sbjct: 769 MQKAVELHNAILK--GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826
Query: 394 ALLGGCRLHKNIKLAEEAMRHLSE--LDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKS 451
++ ++K A E ++E + P Y ++ AG+ + + +R M
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV-AGEMGKATELRNEMLR 885
Query: 452 RGV 454
+G+
Sbjct: 886 QGL 888
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 220/557 (39%), Gaps = 78/557 (14%)
Query: 4 LCSTLPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFF 63
+C + P + T +A + +++A L K + P +V +N+ +
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME------EAGVAPNVVTFNTVIDGL 305
Query: 64 AERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNL 123
G + ++ + + P T S L+K T + I + + K GF N+
Sbjct: 306 GMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV 365
Query: 124 ILQNMLLHLYASCGETSHA----RLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDS 179
I+ N L+ + G + A LM K +T+N +I G A L
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 180 MP----RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
M N S+TSVI L M + ALR EM P + ++ + G
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG- 484
Query: 236 LEFGKSIHRFAE--GNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV----VSW 289
+ K++ + + GF+ + NAL+ + G L+E R+ + R VS+
Sbjct: 485 -KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+++I G M++ G+KP++ T+ ++ ++ V++ +F+ +R
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGG-CR----- 400
+ G++P V Y ++D +A R EE +E M +V PN VV+ L+ CR
Sbjct: 604 N-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 401 ---------LHKNI-----------------------KLAEEAMRHLSELDPLNDGYYVV 428
HK I KL E MR + L+P N +Y
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEP-NVFHYTA 720
Query: 429 MSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 488
+ + Y + G+ +V + R M S+ V ++ I G + G+ T
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD---GNVTEAS------- 770
Query: 489 WEKLLVKMKMKGYIPDT 505
+LL +M+ KG +PD+
Sbjct: 771 --RLLNEMREKGIVPDS 785
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 150/403 (37%), Gaps = 100/403 (24%)
Query: 155 ATWNIMIGHLISAGDVGAARDLFDSMPRR---NVRSWTSVISGLAKCGMSEEALRVFSEM 211
T NI++ L+ A + + FD + + +V +T+ I+ K G EEA+++FS+M
Sbjct: 227 TTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 212 EREGSRPNEVT--------------------------------------VVAVLVACAQL 233
E G PN VT +V L ++
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSW 289
GD F + + GF NV V N LID +++ G L + + D M + T ++
Sbjct: 347 GDAYF---VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVL-HACSHV-------------- 334
+++I G+ + M+ G N +F V+ CSH+
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 335 ---------------GLVDKGRE------FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 373
GL G+ +F + + G V L+ L AG+L
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKL 521
Query: 374 EEA----REVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSE-----LDPLNDG 424
+EA +E++ V + V + L+ GC K + +EA L E L P N
Sbjct: 522 DEAFRIQKEILGRGCV-MDRVSYNTLISGCCGKKKL---DEAFMFLDEMVKRGLKPDNYT 577
Query: 425 YYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
Y +++ ++ K EE + K G+ S+ IDG
Sbjct: 578 YSILICGLF-NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 220/557 (39%), Gaps = 78/557 (14%)
Query: 4 LCSTLPPQIPKPTHLDHATSQNHHLKQARALLIKTNAPLSHVDLAHVPAIVPWNSCLKFF 63
+C + P + T +A + +++A L K + P +V +N+ +
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME------EAGVAPNVVTFNTVIDGL 305
Query: 64 AERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNL 123
G + ++ + + P T S L+K T + I + + K GF N+
Sbjct: 306 GMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV 365
Query: 124 ILQNMLLHLYASCGETSHA----RLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDS 179
I+ N L+ + G + A LM K +T+N +I G A L
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 180 MP----RRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
M N S+TSVI L M + ALR EM P + ++ + G
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG- 484
Query: 236 LEFGKSIHRFAE--GNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTV----VSW 289
+ K++ + + GF+ + NAL+ + G L+E R+ + R VS+
Sbjct: 485 -KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRR 349
+++I G M++ G+KP++ T+ ++ ++ V++ +F+ +R
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 350 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGG-CR----- 400
+ G++P V Y ++D +A R EE +E M +V PN VV+ L+ CR
Sbjct: 604 N-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 401 ---------LHKNI-----------------------KLAEEAMRHLSELDPLNDGYYVV 428
HK I KL E MR + L+P N +Y
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEP-NVFHYTA 720
Query: 429 MSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 488
+ + Y + G+ +V + R M S+ V ++ I G + G+ T
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD---GNVTEAS------- 770
Query: 489 WEKLLVKMKMKGYIPDT 505
+LL +M+ KG +PD+
Sbjct: 771 --RLLNEMREKGIVPDS 785
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 150/403 (37%), Gaps = 100/403 (24%)
Query: 155 ATWNIMIGHLISAGDVGAARDLFDSMPRR---NVRSWTSVISGLAKCGMSEEALRVFSEM 211
T NI++ L+ A + + FD + + +V +T+ I+ K G EEA+++FS+M
Sbjct: 227 TTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 212 EREGSRPNEVT--------------------------------------VVAVLVACAQL 233
E G PN VT +V L ++
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 234 GDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSW 289
GD F + + GF NV V N LID +++ G L + + D M + T ++
Sbjct: 347 GDAYF---VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403
Query: 290 SSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVL-HACSHV-------------- 334
+++I G+ + M+ G N +F V+ CSH+
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 335 ---------------GLVDKGRE------FFTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 373
GL G+ +F + + G V L+ L AG+L
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKL 521
Query: 374 EEA----REVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSE-----LDPLNDG 424
+EA +E++ V + V + L+ GC K + +EA L E L P N
Sbjct: 522 DEAFRIQKEILGRGCV-MDRVSYNTLISGCCGKKKL---DEAFMFLDEMVKRGLKPDNYT 577
Query: 425 YYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
Y +++ ++ K EE + K G+ S+ IDG
Sbjct: 578 YSILICGLF-NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 144/345 (41%), Gaps = 14/345 (4%)
Query: 54 VPWNSCLKFFAERGAPCDTISLFLRL-RQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
V N + F + G D ++ + Q PD +T + L+ + + I
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQD----VATWNIMIGHLISAG 168
+ + G+ ++ N ++ GE A + D+M +D T+N +I L
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 169 DVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
V A +L + + +V ++ S+I GL A+ +F EM +G P+E T
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 225 AVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR-- 282
++ + G L+ ++ + E +G R+V N LID + K E +FD M
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 283 --ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKG 340
R V+++++I G MI G KP+ T+ +L G + K
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 341 REFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 385
+ M + G P + YG L+ L +AGR+E A +++ ++ +
Sbjct: 560 ADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 114/541 (21%), Positives = 215/541 (39%), Gaps = 62/541 (11%)
Query: 25 NHHLKQARALLIKTNAPLSHVDLAHV--------PAIVPWNSCLKFFAERGAPCDTISLF 76
H + LL+ N+ L V+++H P + +N +K I +
Sbjct: 154 THFYNRMLNLLVDGNS-LKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212
Query: 77 LRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASC 136
+ ++PD T + +++ D+ I + + G + + N+++H +
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272
Query: 137 GETSHARLMFDKMPQQD-----VATWNIMIGHLISAGDVGAARDLFDSMPRR----NVRS 187
G A +M QD T+N ++ L AG V A ++ D M + +V +
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 188 WTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAE 247
+ SVISGL K G +EA+ V +M PN VT ++ + +E + R
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 248 GNGFLRNVYVCNALIDMYVKCGCLEEGCRV----FDGMR----ERTVVSWSSMIVGFAMH 299
G L +V N+LI + CL RV F+ MR E +++ +I
Sbjct: 393 SKGILPDVCTFNSLI----QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 300 XXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEH 359
M SG + +T+ ++ + E F M +G+
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV-HGVSRNSVT 507
Query: 360 YGCLVDLLSRAGRLEEAREVIANMSV---PPNGVVWGALLGGCRLHKNIKLAEEAMRHLS 416
Y L+D L ++ R+E+A +++ M + P+ + +LL +IK A + ++ ++
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 417 E--LDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG------- 467
+P Y ++S + +AG+ E S++ RS++ +G+ TP + I G
Sbjct: 568 SNGCEPDIVTYGTLISGL-CKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 468 -----VVHEFVAGDETHPQA-------------KGIFEMWEKLLVKMKMKGYIPDTSVVL 509
+ E + +E P A G LV++ KG++P+ S +
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686
Query: 510 L 510
+
Sbjct: 687 M 687
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 161/440 (36%), Gaps = 59/440 (13%)
Query: 79 LRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGE 138
+ + + PD + +L + + I HA + G + ++ N+L+ +
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 139 TSHARLMFDKMPQ----QDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSV--- 191
A LM + MP D T+ ++ I GD+ A + + M SW++V
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC-SWSNVSVN 263
Query: 192 --ISGLAKCGMSEEALRVFSEM-EREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEG 248
+ G K G E+AL EM ++G P++ T ++ + G ++ I
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 249 NGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXX 304
G+ +VY N++I K G ++E V D M R V+++++I
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 305 XXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLV 364
+ G+ P+ TF ++ E F MR G P Y L+
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLI 442
Query: 365 DLLSRAGRLEEAREVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDG 424
D L G+L+EA ++ M L GC R + + L DG
Sbjct: 443 DSLCSKGKLDEALNMLKQME-----------LSGC------------ARSVITYNTLIDG 479
Query: 425 YYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 484
+ +A K E I M+ GV + + IDG+ D
Sbjct: 480 --------FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA------ 525
Query: 485 IFEMWEKLLVKMKMKGYIPD 504
+L+ +M M+G PD
Sbjct: 526 ------QLMDQMIMEGQKPD 539
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 186/450 (41%), Gaps = 49/450 (10%)
Query: 83 SILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHA 142
+I P T + L+ AC S + + + G +L+ N++L Y S + S A
Sbjct: 76 AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 135
Query: 143 RLMFDKMP----QQDVATWNIMIGHLISAGDVGAARDLFDSMP------RRNVRSWTSVI 192
F+ M + D T+NI+I L G A DLF+SM R +V ++TS++
Sbjct: 136 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 195
Query: 193 SGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFL 252
+ G E VF M EG +PN V+ A++ A A G S+ + NG +
Sbjct: 196 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 255
Query: 253 RNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXX 308
+V L++ Y + + VF MR+ VV+++++I + +
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR--RDYGIVPGVEHYGCLVDL 366
M + G+KPN V+ +L ACS K T++ + GI Y +
Sbjct: 316 FRQMEQDGIKPNVVSVCTLLAACSR---SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 372
Query: 367 LSRAGRLEEAREVIANM---SVPPNGVVWGALL-GGCRLHKNIKLAEEAMRHLSELD--- 419
A LE+A + +M V + V + L+ G CR+ K EA+ +L E++
Sbjct: 373 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK----YPEAISYLKEMEDLS 428
Query: 420 -PLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDET 478
PL Y + Y++ G+ E I MK G + I ++H + A
Sbjct: 429 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP----DVIAYTSMLHAYNAS--- 481
Query: 479 HPQAKGIFEMWEK---LLVKMKMKGYIPDT 505
E W K L ++M+ G PD+
Sbjct: 482 --------EKWGKACELFLEMEANGIEPDS 503
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/457 (18%), Positives = 182/457 (39%), Gaps = 54/457 (11%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLF--LRLRQLSILPDHFTCSFLLKACTISSDIVTGR 108
P +N + ++ G + LF +R ++ PD T + ++ ++ +I R
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 208
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHL 164
+ + G + N++ N L+ YA G + A + + Q DV ++ ++
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 165 ISAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNE 220
+ G A+++F M + NV ++ ++I G EA+ +F +ME++G +PN
Sbjct: 269 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 328
Query: 221 VTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG 280
V+V +L AC++ ++ A+ G N N+ I Y+ LE+ ++
Sbjct: 329 VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS 388
Query: 281 MRERTVVS---------------------------------------WSSMIVGFAMHXX 301
MR++ V + +SS++ ++
Sbjct: 389 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 448
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
M +G +P+ + + +LHA + K E F M + GI P
Sbjct: 449 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN-GIEPDSIACS 507
Query: 362 CLVDLLSRAGRLEEA---REVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
L+ ++ G+ +++ +P G V+ + C + K A + ++ +
Sbjct: 508 ALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY 567
Query: 419 DP-LNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGV 454
P L+ G M +++ ++GK E + ++ + + GV
Sbjct: 568 LPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 604
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 186/450 (41%), Gaps = 49/450 (10%)
Query: 83 SILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHA 142
+I P T + L+ AC S + + + G +L+ N++L Y S + S A
Sbjct: 208 AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 267
Query: 143 RLMFDKMP----QQDVATWNIMIGHLISAGDVGAARDLFDSMP------RRNVRSWTSVI 192
F+ M + D T+NI+I L G A DLF+SM R +V ++TS++
Sbjct: 268 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 327
Query: 193 SGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFL 252
+ G E VF M EG +PN V+ A++ A A G S+ + NG +
Sbjct: 328 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 387
Query: 253 RNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXX 308
+V L++ Y + + VF MR+ VV+++++I + +
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 309 XXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMR--RDYGIVPGVEHYGCLVDL 366
M + G+KPN V+ +L ACS K T++ + GI Y +
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSR---SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 504
Query: 367 LSRAGRLEEAREVIANM---SVPPNGVVWGALL-GGCRLHKNIKLAEEAMRHLSELD--- 419
A LE+A + +M V + V + L+ G CR+ K EA+ +L E++
Sbjct: 505 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK----YPEAISYLKEMEDLS 560
Query: 420 -PLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHEFVAGDET 478
PL Y + Y++ G+ E I MK G + I ++H + A
Sbjct: 561 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP----DVIAYTSMLHAYNAS--- 613
Query: 479 HPQAKGIFEMWEK---LLVKMKMKGYIPDT 505
E W K L ++M+ G PD+
Sbjct: 614 --------EKWGKACELFLEMEANGIEPDS 635
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/457 (18%), Positives = 182/457 (39%), Gaps = 54/457 (11%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLF--LRLRQLSILPDHFTCSFLLKACTISSDIVTGR 108
P +N + ++ G + LF +R ++ PD T + ++ ++ +I R
Sbjct: 281 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 340
Query: 109 IIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHL 164
+ + G + N++ N L+ YA G + A + + Q DV ++ ++
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 165 ISAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNE 220
+ G A+++F M + NV ++ ++I G EA+ +F +ME++G +PN
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Query: 221 VTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG 280
V+V +L AC++ ++ A+ G N N+ I Y+ LE+ ++
Sbjct: 461 VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS 520
Query: 281 MRERTVVS---------------------------------------WSSMIVGFAMHXX 301
MR++ V + +SS++ ++
Sbjct: 521 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 580
Query: 302 XXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYG 361
M +G +P+ + + +LHA + K E F M + GI P
Sbjct: 581 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN-GIEPDSIACS 639
Query: 362 CLVDLLSRAGRLEEA---REVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSEL 418
L+ ++ G+ +++ +P G V+ + C + K A + ++ +
Sbjct: 640 ALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY 699
Query: 419 DP-LNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGV 454
P L+ G M +++ ++GK E + ++ + + GV
Sbjct: 700 LPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 736
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 161/421 (38%), Gaps = 91/421 (21%)
Query: 127 NMLLHLYASCGETSHARLMFDKMPQQDVA----TWNIMIGHLISAGDVGAARDLFDSMPR 182
N L+ Y + G + +F M Q ++ T+N ++ L+ G G A DLFD M R
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 183 R-----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLE 237
+ ++ ++I+G K M +EA R+F +ME P+ VT
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTY-------------- 247
Query: 238 FGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER------TVVSWSS 291
N +ID + G ++ V GM ++ VVS+++
Sbjct: 248 ---------------------NTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDK-------GREFF 344
++ G+ M M+ G+KPN VT+ ++ S D+ G + F
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAF 346
Query: 345 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA---NMSVPPNGVVWGALLGGCRL 401
T P + L+ AG L+ A +V NM + P+ + L+ +
Sbjct: 347 TT------FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCM 400
Query: 402 HKNIKLAEEAMRHL---------SELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
AE L E PL Y + + A GK ++ ++ R + R
Sbjct: 401 RNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCAN-GKTKQAEKVFRQLMKR 459
Query: 453 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD--TSVVLL 510
GV+ P ++ I G E G F+ +LLV M + ++PD T +L+
Sbjct: 460 GVQDPPSYKTL-ITGHCRE------------GKFKPAYELLVLMLRREFVPDLETYELLI 506
Query: 511 D 511
D
Sbjct: 507 D 507
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 173/412 (41%), Gaps = 31/412 (7%)
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLI 165
++ + + G N+ N++++ G+ ++ ++ D+ T+N +I
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 166 SAGDVGAARDLFDSMPRRN----VRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
S G + A +L ++MP + V ++ +VI+GL K G E A VF+EM R G P+
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
T ++L+ + GD+ + + + ++ ++++ ++ + G L++ F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 282 RERTVVS----WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
+E ++ ++ +I G+ M++ G + VT+ +LH ++
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGA 394
+ + F M + + P L+D + G L+ A E+ M + + V +
Sbjct: 462 GEADKLFNEM-TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 395 LLGGCRLHKNIKLAEEAMRHL--SELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSR 452
LL G +I A+E + E+ P Y +++ N G E R+ M S+
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV-NALCSKGHLAEAFRVWDEMISK 579
Query: 453 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD 504
+K T + I G A D E L KM +G++PD
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASD------------GESFLEKMISEGFVPD 619
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 170/423 (40%), Gaps = 23/423 (5%)
Query: 51 PAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTC-SFLLKACTISSDIVTGRI 109
P + +N+ + + G +F + + + PD T S L++AC D+V
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK-KGDVVETEK 361
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLI 165
+ + ++ +L+ + ++ L+ G A + F+ + + D + I+I
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 166 SAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEV 221
G + A +L + M ++ +V ++ +++ GL K M EA ++F+EM P+
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 222 TVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGM 281
T+ ++ +LG+L+ + + + +V N L+D + K G ++ ++ M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 282 RER----TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLV 337
+ T +S+S ++ MI +KP + ++ G
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 338 DKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNGVV-----W 392
G F M + G VP Y L+ R + +A ++ M G+V +
Sbjct: 602 SDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 393 GALLGGCRLHKNIKLAEEAMRHLSE--LDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMK 450
++L G +K AE +R + E ++P + Y M N + E RI M
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNP-DRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 451 SRG 453
RG
Sbjct: 720 QRG 722
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 9/226 (3%)
Query: 250 GFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXX 305
GF ++ CNALI V+ G +E V+ + V + + M+
Sbjct: 195 GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV 254
Query: 306 XXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGCLVD 365
+ G+ P+ VT+ ++ A S GL+++ E M G PGV Y +++
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK-GFSPGVYTYNTVIN 313
Query: 366 LLSRAGRLEEAREVIANM---SVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLN 422
L + G+ E A+EV A M + P+ + +LL ++ E+ + D +
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 423 DGY-YVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDG 467
D + M +++ +G ++ S+K G+ +I I G
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 129/335 (38%), Gaps = 39/335 (11%)
Query: 70 CDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNML 129
C T + + LS+ + S L K +D + ++ K + + N L
Sbjct: 70 CSTSDILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRL 129
Query: 130 LHLYASCGETSHARLMFDKMPQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWT 189
L ++ SCG R MFD+MP +D +W I+ I GD A LF SM + + +
Sbjct: 130 LLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAF 189
Query: 190 SVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGN 249
+ S + C VL ACA + D E GK +H
Sbjct: 190 KIPSWILGC---------------------------VLKACAMIRDFELGKQVHALCHKL 222
Query: 250 GFL--RNVYVCNALIDMYVKCGCLEEGCRVFDGMRERTVVSWSSMIVGFAMHXXXXXXXX 307
GF+ + Y+ +LI Y + CLE+ V + V+W++ +
Sbjct: 223 GFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIR 282
Query: 308 XXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVEHYGC----- 362
M G+K N F VL ACS V D GR + I G E C
Sbjct: 283 DFIEMGNHGIKKNVSVFSNVLKACSWVS--DGGRSGQQVHAN--AIKLGFES-DCLIRCR 337
Query: 363 LVDLLSRAGRLEEAREVIANMSVPPNGVVWGALLG 397
L+++ + G++++A +V + + W A++
Sbjct: 338 LIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVA 372
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 40/242 (16%)
Query: 94 LLKACTISSDIVTGRIIHAYVQKLGF--QSNLILQNMLLHLYAS--CGETSHARLMFDKM 149
+LKAC + D G+ +HA KLGF + + L L+ Y C E +
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDA--------- 249
Query: 150 PQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFS 209
N+++ L +A N +W + ++ + G +E +R F
Sbjct: 250 --------NLVLHQLSNA----------------NTVAWAAKVTNDYREGEFQEVIRDFI 285
Query: 210 EMEREGSRPNEVTVVAVLVACAQLGDL-EFGKSIHRFAEGNGFLRNVYVCNALIDMYVKC 268
EM G + N VL AC+ + D G+ +H A GF + + LI+MY K
Sbjct: 286 EMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKY 345
Query: 269 GCLEEGCRVFDGMRERTVVS-WSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGV 327
G +++ +VF ++ T VS W++M+ + + M +G+K H T +
Sbjct: 346 GKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKA-HDTLLNE 404
Query: 328 LH 329
H
Sbjct: 405 AH 406
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 171/426 (40%), Gaps = 25/426 (5%)
Query: 53 IVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHA 112
+V ++S + + + G ++ R+ I P+ T + L+K I ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 113 YVQKLGFQSNLILQNMLLHLYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAG 168
+ K G + +++ + L+ + CG +++ M + DV + +++ L G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 169 DVGAAR----DLFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVV 224
+ A + R NV + S+I G + +EAL+VF M G +P+ T
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 225 AVL-------VACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRV 277
V+ C + G + + N ++ VCN +I + KC +E+ +
Sbjct: 536 TVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 594
Query: 278 F----DGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSH 333
F +G E +V++++MI G+ + + PN VT ++H
Sbjct: 595 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 654
Query: 334 VGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGV 390
+D F+IM + G P YGCL+D S++ +E + ++ M + P+ V
Sbjct: 655 NNDMDGAIRMFSIM-AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Query: 391 VWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGY-YVVMSNVYAEAGKWEEVSRIRRSM 449
+ ++ G + A + L D Y ++ Y + G+ E + + M
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 450 KSRGVK 455
GVK
Sbjct: 774 LRNGVK 779
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 9/236 (3%)
Query: 176 LFDSMPRRNVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGD 235
+ D P NV ++ ++I+G K G + A +F ME+ G P+ + ++ + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 236 LEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMR----ERTVVSWSS 291
L G + A G +V V ++ ID+YVK G L V+ M VV+++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 292 MIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDY 351
+I G +++ GM+P+ VT+ ++ G + G + M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-M 455
Query: 352 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNGVVWGALLGG-CRLHK 403
G P V YG LVD LS+ G + A M S+ N VV+ +L+ G CRL++
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 162/402 (40%), Gaps = 35/402 (8%)
Query: 87 DHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHARLM- 145
D C FL++ C + I Y +LG +I Q+ + + S + L+
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGV---VIPQDSVYRMLNSLIGSDRVDLIA 201
Query: 146 --FDKM-----PQQDVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR----SWTSVISG 194
FDK+ V+ ++ L G+V A D + R R S V+ G
Sbjct: 202 DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG 261
Query: 195 LAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRN 254
L+ E A R+ S + G PN VT ++ + G+++ + + E G +
Sbjct: 262 LS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320
Query: 255 VYVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXX 310
+ + LID Y K G L G ++F + VV +SS I +
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 311 XMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFF-TIMRRDYGIVPGVEHYGCLVDLLSR 369
M+ G+ PN VT+ ++ G + + + I++R G+ P + Y L+D +
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR--GMEPSIVTYSSLIDGFCK 438
Query: 370 AGRLEEA---REVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRH----LSELDPLN 422
G L E + M PP+ V++G L+ G L K L AMR L + LN
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG--LSKQ-GLMLHAMRFSVKMLGQSIRLN 495
Query: 423 DGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSIT 464
+ + + + +++E ++ R M G+K P ++ T
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK--PDVATFT 535
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 114/262 (43%), Gaps = 21/262 (8%)
Query: 73 ISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHL 132
++ F + ++SI+ D F C + G + +Q+ +++ + N+++HL
Sbjct: 531 VATFTTVMRVSIMEDAF-CKHMKPT--------IGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 133 YASCGETSHARLMFDKM----PQQDVATWNIMIGHLISAGDVGAARDLFDSMPRR----N 184
C A F+ + + D+ T+N MI S + A +F+ + N
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 185 VRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHR 244
+ T +I L K + A+R+FS M +GS+PN VT ++ ++ D+E +
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 245 FAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVF----DGMRERTVVSWSSMIVGFAMHX 300
+ G ++ + +ID K G ++E +F D VV+++ +I G+
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 301 XXXXXXXXXXXMIRSGMKPNHV 322
M+R+G+KP+ +
Sbjct: 762 RLVEAALLYEHMLRNGVKPDDL 783
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 190/453 (41%), Gaps = 37/453 (8%)
Query: 72 TISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLH 131
TI++FL + + P F ++A SD+ G + ++ ++ + N+L+
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 132 LYASCGETSHARLMFDKMPQQ----DVATWNIMIGHLISAGDVGAARDLFDSMPRRNVR- 186
+ A +FD+M + + T+N +I AG+ + + + M ++
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 187 ---SWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIH 243
++ +++ GL K GM E+A V EM+ G P+ T + + E ++
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 244 RFAEGNGFLRNVYVCNALIDMYVKCGCLEE-----GCRVFDGMRERTVVSWSSMIVGFAM 298
A +G N Y C+ L++ K G +E+ G + G+ V+ +++MI G+
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI-YNTMIDGYCR 401
Query: 299 HXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTIMRRDYGIVPGVE 358
M + GMKP+H+ + ++ +G ++ + M+ G+ P VE
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSPSVE 460
Query: 359 HYGCLVDLLSRAGRLEEAREVIANMS---VPPNGVVWGALLGGCRLHKNIKLAEEAM--R 413
Y L+ R ++ +++ M PN V +G L+ C L K KL E + R
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI-NC-LCKGSKLLEAQIVKR 518
Query: 414 HLSE--LDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKTPGCSSITIDGVVHE 471
+ + + P Y +++ ++ GK E+ R + M +G++ + IDG+
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSK-GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL--- 574
Query: 472 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD 504
G E LL+++ KG PD
Sbjct: 575 ---------SMTGKLSEAEDLLLEISRKGLKPD 598
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 166/404 (41%), Gaps = 30/404 (7%)
Query: 50 VPAIVPWNSCLKFFAERGAPCDTISLFLRLRQLSILPDHFTCSFLLKACTISSDIVTGRI 109
+P+++ +N+ + + + G P + + R++ I P T + LLK + +
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 110 IHAYVQKLGFQSNLILQNMLLHLYASCGETSHARL-----MFDKMPQQDVATWNIMIGHL 164
+ ++ LGF + ++L Y+S E + A L D + + T +I++ L
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSS-NEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 165 ISAGDVGAARDLFDSMPRR----NVRSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNE 220
G + A ++ + N + ++I G + G A ME++G +P+
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 221 VTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDG 280
+ ++ +LG++E + + G +V N LI Y G E + FD
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY---GRKYEFDKCFDI 481
Query: 281 MRER-------TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSH 333
++E VVS+ ++I M G+ P + ++ C
Sbjct: 482 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 334 VGLVDKGREFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNGV 390
G ++ F M + GI + Y L+D LS G+L EA +++ +S + P+
Sbjct: 542 KGKIEDAFRFSKEMLKK-GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 391 VWGALLGGCRLHKNIK----LAEEAMRHLSELDPLNDGYYVVMS 430
+ +L+ G N++ L EE R S + P Y++++S
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKR--SGIKPTLKTYHLLIS 642
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 155/385 (40%), Gaps = 19/385 (4%)
Query: 84 ILPDHFTCSFLLKACTISSDIVTGRIIHAYVQKLGFQSNLILQNMLLHLYASCGETSHAR 143
++P+ + ++ D+V R+ ++K G + + + N L+ + GE +A
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 144 LMFDKMPQQDVA----TWNIMIGHLISAGDVGAARDLFDSMPRR----NVRSWTSVISGL 195
+KM + V+ T+NI+IG + D+ M NV S+ ++I+ L
Sbjct: 445 KEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504
Query: 196 AKCGMSEEALRVFSEMEREGSRPNEVTVVAVLVACAQLGDLEFGKSIHRFAEGNGFLRNV 255
K EA V +ME G P ++ C G +E + G N+
Sbjct: 505 CKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL 564
Query: 256 YVCNALIDMYVKCGCLEEGCRVFDGMRER----TVVSWSSMIVGFAMHXXXXXXXXXXXX 311
N LID G L E + + + V +++S+I G+
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 312 MIRSGMKPNHVTFIGVLHACSHVGLVDKGREFFTI-MRRDYGIVPGVEHYGCLVDLLSRA 370
M RSG+KP T+ ++ C+ G+ R F + ++ D + GV H + + +A
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKA 684
Query: 371 GRLEEA--REVIANMSVPPNGVVWGALLGGCRLHKNIKLAEEAMRHLSELDPLNDGYYVV 428
L++ + I N ++ G L G +L + L +E + E++P D Y ++
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLKVG-KLCEVRSLIDEM--NAREMEPEADTYNII 741
Query: 429 MSNVYAEAGKWEEVSRIRRSMKSRG 453
+ + E + R M+ +G
Sbjct: 742 VKG-HCEVKDYMSAYVWYREMQEKG 765
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 134/346 (38%), Gaps = 25/346 (7%)
Query: 170 VGAARDLFDSMPRRNV----RSWTSVISGLAKCGMSEEALRVFSEMEREGSRPNEVTVVA 225
+ A DLF ++ + S T ++ L K + VF + RP++
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 226 VLVACAQLGDLEFGKSIHRFAEGNGFLRNVYVCNALIDMYVKCGCLEEGCRVFDGMRER- 284
+ A +L D+ G + + + +V++ N LID K + + ++FD M R
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 285 ---TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRSGMKPNHVTFIGVLHACSHVGLVDKGR 341
++++++++I G+ M ++P+ +TF +L G+V+
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 342 EFFTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA---REVIANMSVPPNGVVWGALLGG 398
M +D G VP + L D S + E A E + V N LL
Sbjct: 305 NVLKEM-KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 399 CRLHKNIKLAEEAM-RHLSELDPLNDGYYVVMSNVYAEAGKWEEVSRIRRSMKSRGVKKT 457
I+ AEE + R +++ N+ Y M + Y G +M+ +G+K
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP- 422
Query: 458 PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIP 503
+ + ++ F G E EK + KMK+KG P
Sbjct: 423 ---DHLAYNCLIRRFC--------ELGEMENAEKEVNKMKLKGVSP 457