Miyakogusa Predicted Gene

Lj3g3v0420540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0420540.1 Non Chatacterized Hit- tr|I3S3W0|I3S3W0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,50,3e-19,UBIQUINONE/MENAQUINONE BIOSYNTHESIS
METHYLTRANSFERASE,NULL; METHYLTRANSFERASE,NULL; seg,NULL;
S-aden,gene.g45262.t1.1
         (199 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33110.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   144   5e-35
AT4G33110.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   144   5e-35
AT4G33120.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   142   1e-34

>AT4G33110.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:15972497-15974531 REVERSE LENGTH=355
          Length = 355

 Score =  144 bits (362), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 77/85 (90%)

Query: 115 FEDDVTVINHWLLNGKHYAQTSEEWLKIMDKNMSSIKPIMESTYGKDSAIQWTVYWRTYF 174
           F+++V++++HWL++G HYA+TSEEWLK MDK + ++K IME TYGK+ A++W VYWRT+F
Sbjct: 271 FQENVSIVDHWLVSGTHYAKTSEEWLKRMDKEIVAVKKIMEVTYGKEEAVKWMVYWRTFF 330

Query: 175 IAIAELFGYNNGEEWMVAHFLFKKK 199
           IA+AELFGYNNGEEWMVAHFLFKKK
Sbjct: 331 IAVAELFGYNNGEEWMVAHFLFKKK 355



 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 16/105 (15%)

Query: 1   MENALQLLYNTGVKLMLTSLERNLLPDAVIXXXXXXXXXXXXXX---------------- 44
           ME  + + Y   VK+ LT LE NLLPD VI                              
Sbjct: 1   MEKIIDVAYGASVKVGLTLLEMNLLPDIVIRRLTRLLLAGRLRSGYKPTAEMQLSDLLRF 60

Query: 45  XXXXQDMPIAVSTNKAKSQHYELPTSFFRLVLGKNLKYRDLQLQN 89
               + MPIA+ T K K+QHYELPT+FF LVLG+N+KY      N
Sbjct: 61  VDSIKKMPIAIHTEKPKTQHYELPTAFFELVLGRNMKYSSCYFSN 105



 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 30/36 (83%)

Query: 81  KYRDLQLQNLDIIVADISTFEMEASYDRIYSIGMFE 116
           K R L LQN++IIVADISTFE E +YDRI+SI MFE
Sbjct: 172 KCRKLGLQNIEIIVADISTFEHEGTYDRIFSIEMFE 207


>AT4G33110.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:15972497-15974531 REVERSE LENGTH=355
          Length = 355

 Score =  144 bits (362), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 77/85 (90%)

Query: 115 FEDDVTVINHWLLNGKHYAQTSEEWLKIMDKNMSSIKPIMESTYGKDSAIQWTVYWRTYF 174
           F+++V++++HWL++G HYA+TSEEWLK MDK + ++K IME TYGK+ A++W VYWRT+F
Sbjct: 271 FQENVSIVDHWLVSGTHYAKTSEEWLKRMDKEIVAVKKIMEVTYGKEEAVKWMVYWRTFF 330

Query: 175 IAIAELFGYNNGEEWMVAHFLFKKK 199
           IA+AELFGYNNGEEWMVAHFLFKKK
Sbjct: 331 IAVAELFGYNNGEEWMVAHFLFKKK 355



 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 16/105 (15%)

Query: 1   MENALQLLYNTGVKLMLTSLERNLLPDAVIXXXXXXXXXXXXXX---------------- 44
           ME  + + Y   VK+ LT LE NLLPD VI                              
Sbjct: 1   MEKIIDVAYGASVKVGLTLLEMNLLPDIVIRRLTRLLLAGRLRSGYKPTAEMQLSDLLRF 60

Query: 45  XXXXQDMPIAVSTNKAKSQHYELPTSFFRLVLGKNLKYRDLQLQN 89
               + MPIA+ T K K+QHYELPT+FF LVLG+N+KY      N
Sbjct: 61  VDSIKKMPIAIHTEKPKTQHYELPTAFFELVLGRNMKYSSCYFSN 105



 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 30/36 (83%)

Query: 81  KYRDLQLQNLDIIVADISTFEMEASYDRIYSIGMFE 116
           K R L LQN++IIVADISTFE E +YDRI+SI MFE
Sbjct: 172 KCRKLGLQNIEIIVADISTFEHEGTYDRIFSIEMFE 207


>AT4G33120.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:15975577-15978055 REVERSE LENGTH=355
          Length = 355

 Score =  142 bits (359), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 58/85 (68%), Positives = 77/85 (90%)

Query: 115 FEDDVTVINHWLLNGKHYAQTSEEWLKIMDKNMSSIKPIMESTYGKDSAIQWTVYWRTYF 174
           F+++V++++HWL+NG HYA+TSEEWLK MDK + ++K IME TYGK+ A++WTVYWRT+F
Sbjct: 271 FQENVSIMDHWLVNGTHYAKTSEEWLKGMDKEIVAVKEIMEVTYGKEEAVKWTVYWRTFF 330

Query: 175 IAIAELFGYNNGEEWMVAHFLFKKK 199
           IA+AELF YNNG+EWM+AHFLFKKK
Sbjct: 331 IALAELFAYNNGDEWMIAHFLFKKK 355



 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 16/105 (15%)

Query: 1   MENALQLLYNTGVKLMLTSLERNLLPDAVIXXXXXXXXXXXXXXXX-------------- 46
           ME  + + Y   VK  LT LE+NLLPD VI                              
Sbjct: 1   MEKIIDVAYGASVKAGLTLLEKNLLPDLVIRRLIRLLLASRLRSVYKPTAEMQLSDLLRF 60

Query: 47  --XXQDMPIAVSTNKAKSQHYELPTSFFRLVLGKNLKYRDLQLQN 89
               + MPIA++T  AK+QHYELPT+FF   LG+N+KY      N
Sbjct: 61  VDSLKKMPIAINTETAKTQHYELPTAFFEHALGRNIKYSCCYYSN 105