Miyakogusa Predicted Gene
- Lj3g3v0323530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0323530.1 Non Chatacterized Hit- tr|I3SKR0|I3SKR0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.36,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; HELICASE_CTER,Helicase, C-termina,CUFF.40548.1
(314 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 592 e-169
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 591 e-169
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 589 e-169
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 574 e-164
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 574 e-164
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 573 e-164
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 561 e-160
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 366 e-101
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 349 2e-96
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 189 1e-48
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 187 6e-48
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 187 6e-48
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 186 2e-47
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 186 2e-47
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 152 4e-37
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 152 4e-37
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 151 7e-37
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 151 7e-37
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 146 2e-35
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 140 1e-33
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 138 6e-33
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 138 6e-33
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 135 3e-32
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 134 8e-32
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 134 9e-32
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 134 1e-31
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 132 3e-31
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 132 3e-31
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 132 3e-31
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 132 4e-31
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 130 8e-31
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 130 9e-31
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 128 4e-30
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 128 4e-30
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 127 9e-30
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 127 1e-29
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 127 1e-29
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 127 1e-29
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 126 2e-29
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 124 1e-28
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 119 2e-27
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 119 3e-27
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 119 3e-27
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 118 4e-27
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 115 3e-26
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 114 1e-25
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 113 1e-25
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 113 1e-25
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 113 1e-25
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 112 3e-25
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 111 5e-25
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 110 9e-25
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 110 1e-24
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 109 2e-24
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 109 2e-24
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 109 3e-24
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 103 1e-22
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 102 5e-22
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 100 2e-21
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 100 2e-21
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 99 3e-21
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 99 5e-21
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 97 2e-20
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 96 2e-20
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 96 3e-20
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 96 3e-20
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 92 4e-19
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 90 2e-18
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 90 2e-18
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 90 2e-18
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 87 1e-17
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 83 3e-16
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 82 4e-16
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 81 1e-15
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 80 2e-15
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 77 1e-14
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 65 6e-11
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 62 6e-10
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 592 bits (1525), Expect = e-169, Method: Compositional matrix adjust.
Identities = 284/315 (90%), Positives = 303/315 (96%), Gaps = 3/315 (0%)
Query: 1 MAGLAPEGSQFDAKQYDSKMTELLATDGQ-EFFTSYDEVYDTFDSMGLHENLLRGIYAYG 59
MAG APEG+QFDA+Q+D K+ E+L +GQ EFFTSYD+V+++FD+MGL ENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYG 58
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQL++ L+QCQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 118
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDML+RQSLR
Sbjct: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 178
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D+IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 300 RSNDHTVSATHGDMD 314
RS DHTVSATHGDMD
Sbjct: 299 RSRDHTVSATHGDMD 313
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 285/315 (90%), Positives = 301/315 (95%), Gaps = 3/315 (0%)
Query: 1 MAGLAPEGSQFDAKQYDSKMTELLATDGQ-EFFTSYDEVYDTFDSMGLHENLLRGIYAYG 59
MAG APEG+QFD +Q+D ++ E+L DGQ EFFTSYDEV+++FD+MGL ENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYG 58
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQL+Y L+QCQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 118
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDMLRRQSLR
Sbjct: 119 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 178
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
PD IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 300 RSNDHTVSATHGDMD 314
RS DHTVSATHGDMD
Sbjct: 299 RSRDHTVSATHGDMD 313
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 589 bits (1519), Expect = e-169, Method: Compositional matrix adjust.
Identities = 284/315 (90%), Positives = 303/315 (96%), Gaps = 3/315 (0%)
Query: 1 MAGLAPEGSQFDAKQYDSKMTELLATDGQ-EFFTSYDEVYDTFDSMGLHENLLRGIYAYG 59
MAG APEG+QFDA+Q+D K+ E+L +GQ EFFTSYD+V+++FD+MGL ENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYG 58
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQL++ L+QCQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 118
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDML+RQSLR
Sbjct: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 178
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D+IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 300 RSNDHTVSATHGDMD 314
RS DHTVSATHGDMD
Sbjct: 299 RSRDHTVSATHGDMD 313
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 574 bits (1480), Expect = e-164, Method: Compositional matrix adjust.
Identities = 279/315 (88%), Positives = 298/315 (94%), Gaps = 8/315 (2%)
Query: 1 MAGLAPEGSQFDAKQYDSKMTELLATDGQ-EFFTSYDEVYDTFDSMGLHENLLRGIYAYG 59
MAG APEG+QFDA+Q+D K+ E+L +GQ EFFTSYD+V+++FD+MGL ENLLRG
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRG----- 53
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQL++ L+QCQALVLAPTRE
Sbjct: 54 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 113
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDML+RQSLR
Sbjct: 114 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 173
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D+IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 174 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 233
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 234 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 293
Query: 300 RSNDHTVSATHGDMD 314
RS DHTVSATHGDMD
Sbjct: 294 RSRDHTVSATHGDMD 308
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 574 bits (1479), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/315 (88%), Positives = 296/315 (93%), Gaps = 8/315 (2%)
Query: 1 MAGLAPEGSQFDAKQYDSKMTELLATDGQ-EFFTSYDEVYDTFDSMGLHENLLRGIYAYG 59
MAG APEG+QFD +Q+D ++ E+L DGQ EFFTSYDEV+++FD+MGL ENLLRG
Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRG----- 53
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTRE 119
FE+PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQL+Y L+QCQALVLAPTRE
Sbjct: 54 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 113
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVH VVGTPGRVFDMLRRQSLR
Sbjct: 114 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 173
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
PD IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 174 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 233
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNVEKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 234 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 293
Query: 300 RSNDHTVSATHGDMD 314
RS DHTVSATHGDMD
Sbjct: 294 RSRDHTVSATHGDMD 308
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 573 bits (1477), Expect = e-164, Method: Compositional matrix adjust.
Identities = 271/315 (86%), Positives = 296/315 (93%), Gaps = 1/315 (0%)
Query: 1 MAGLAPEGSQFDAKQYDSKMTELLATDGQE-FFTSYDEVYDTFDSMGLHENLLRGIYAYG 59
MAG+A +G+Q+D +Q+D+KM +L +G+E F+T+YDEV D+FD+M L +LLRGIYAYG
Sbjct: 1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG 60
Query: 60 FERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTRE 119
FE+PSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQL+ LVQCQALVLAPTRE
Sbjct: 61 FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE 120
Query: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
LAQQIEKVMRALGDYLGVK ACVGGTSVREDQR+LQ+GVH VVGTPGRVFD+LRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
D+IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKPV
Sbjct: 181 ADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV 240
Query: 240 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 299
RILVKRDELTLEGIKQFYVNV+KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300
Query: 300 RSNDHTVSATHGDMD 314
RS DHTVSATHGDMD
Sbjct: 301 RSRDHTVSATHGDMD 315
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 561 bits (1445), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/289 (92%), Positives = 282/289 (97%), Gaps = 1/289 (0%)
Query: 27 DGQ-EFFTSYDEVYDTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQ 85
+GQ EFFTSYD+V+++FD+MGL ENLLRGIYAYGFE+PSAIQQRGIVPFCKGLDVIQQAQ
Sbjct: 15 EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 74
Query: 86 SGTGKTATFCSGILQQLNYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 145
SGTGKTATFCSG+LQQL++ L+QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG
Sbjct: 75 SGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 134
Query: 146 TSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYD 205
TSVREDQRILQAGVH VVGTPGRVFDML+RQSLR D+IKMFVLDEADEMLSRGFKDQIYD
Sbjct: 135 TSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYD 194
Query: 206 IFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265
IFQLLP KIQVGVFSATMPPEALEITRKFM+KPVRILVKRDELTLEGIKQFYVNVEKEEW
Sbjct: 195 IFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEW 254
Query: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS DHTVSATHGDMD
Sbjct: 255 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMD 303
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/288 (60%), Positives = 225/288 (78%), Gaps = 7/288 (2%)
Query: 26 TDGQEFFTSYDEVYDTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQ 85
TDG E TS F+ MG+ E++LRG+Y YGFE+PSAIQQR ++P +G DVI QAQ
Sbjct: 28 TDGIEPITS-------FNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQ 80
Query: 86 SGTGKTATFCSGILQQLNYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 145
SGTGKT+ + Q ++ + QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG
Sbjct: 81 SGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGG 140
Query: 146 TSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYD 205
SV ED R L+ GVH V GTPGRV DM++R+SLR +IK+ +LDE+DEMLSRGFKDQIYD
Sbjct: 141 NSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYD 200
Query: 206 IFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265
+++ LP +QV + SAT+P E LE+T KFM +PV+ILVKRDELTLEGIKQF+V VEKEEW
Sbjct: 201 VYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEW 260
Query: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
K +TLCDLY+TL ITQ+VIF NT+RKVD+L++KMRS++ TVS+ HGDM
Sbjct: 261 KFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDM 308
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 349 bits (895), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 159/272 (58%), Positives = 211/272 (77%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+FD MG+++ +LRG+Y YG+++PS IQQR +VP KG DVI QAQSGTGKT+ + Q
Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQ 82
Query: 101 QLNYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 160
+N + Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED + L+ GVH
Sbjct: 83 IVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVH 142
Query: 161 TVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFS 220
V GTPGRV+DM++R SL+ ++K+ VLDE+DEMLS+G KDQIYD+++ LP IQV + S
Sbjct: 143 AVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLIS 202
Query: 221 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 280
AT+P E LE+T KFM PVRILVK DELTLEGIKQ+YV+V+KEEWK +TLCDLY L I
Sbjct: 203 ATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTIN 262
Query: 281 QSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
Q++IF NTR+KVDWLT+KMRS++ VS+ HGD
Sbjct: 263 QAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGD 294
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 157/274 (57%), Gaps = 2/274 (0%)
Query: 40 DTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ L +LLRGIY GFE+PS IQ+ I G D++ +A++GTGKT FC L
Sbjct: 154 NEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTL 213
Query: 100 QQLNYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
++++ E QA++L PTRELA Q +V + L YL ++V GGTS+R+D L V
Sbjct: 214 EKIDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPV 273
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVF 219
H +VGTPGR+ D+ ++ M V+DEAD++LS F+ I ++ Q LP Q+ +F
Sbjct: 274 HLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMF 333
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 279
SAT P +++ KP I+ D+LTL G+ Q+Y VE E K+ L L+ L I
Sbjct: 334 SATFPVTVKSFKDRYLKKPY-IINLMDQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQI 391
Query: 280 TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
QS+IF N+ +V+ L K+ ++ H M
Sbjct: 392 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM 425
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 158/274 (57%), Gaps = 2/274 (0%)
Query: 40 DTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ L LL GIY GFERPS IQ+ I G D++ +A++GTGKTA FC +L
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 100 QQLNYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
++++ + QA+++ PTRELA Q +V + LG +L ++V GGTS+++D L V
Sbjct: 191 EKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 250
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVF 219
H +VGTPGR+ D+ ++ + V+DEAD++LS+ F+ + + LP Q+ +F
Sbjct: 251 HLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMF 310
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 279
SAT P + +F+ P I + DELTL+GI QFY VE E K+ L L+ L I
Sbjct: 311 SATFPVTVKDFKDRFLTNPYVINLM-DELTLKGITQFYAFVE-ERQKIHCLNTLFSKLQI 368
Query: 280 TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
QS+IF N+ +V+ L K+ ++ H M
Sbjct: 369 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM 402
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 158/274 (57%), Gaps = 2/274 (0%)
Query: 40 DTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+ F+ L LL GIY GFERPS IQ+ I G D++ +A++GTGKTA FC +L
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 100 QQLNYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
++++ + QA+++ PTRELA Q +V + LG +L ++V GGTS+++D L V
Sbjct: 191 EKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 250
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVF 219
H +VGTPGR+ D+ ++ + V+DEAD++LS+ F+ + + LP Q+ +F
Sbjct: 251 HLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMF 310
Query: 220 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 279
SAT P + +F+ P I + DELTL+GI QFY VE E K+ L L+ L I
Sbjct: 311 SATFPVTVKDFKDRFLTNPYVINLM-DELTLKGITQFYAFVE-ERQKIHCLNTLFSKLQI 368
Query: 280 TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
QS+IF N+ +V+ L K+ ++ H M
Sbjct: 369 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM 402
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 169/312 (54%), Gaps = 9/312 (2%)
Query: 6 PEGSQFDAKQYDSKMTELLATDGQEFFTSYDEVYDT----FDSMGLHENLLRGIYAYGFE 61
PE S DA D K T L + T+ +V T F+ L +LL+GIY GFE
Sbjct: 89 PEASS-DANGQDWKATLRLPPPDTRYQTA--DVTATKGNEFEDYFLKRDLLKGIYEKGFE 145
Query: 62 RPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTRELA 121
+PS IQ+ I G D++ +A++GTGKT FC +L++++ QA++L PTRELA
Sbjct: 146 KPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELA 205
Query: 122 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPD 181
Q +V + L YL ++V GGTS+R+D L VH +VGTPGR+ D+ ++
Sbjct: 206 LQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLK 265
Query: 182 SIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRI 241
M V+DEAD++LS F+ + ++ Q LP Q +FSAT P + + KP I
Sbjct: 266 DCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVI 325
Query: 242 LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS 301
+ D+LTL G+ Q+Y VE E K+ L L+ L I QS+IF N+ +V+ L K+
Sbjct: 326 NLM-DQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 383
Query: 302 NDHTVSATHGDM 313
++ H M
Sbjct: 384 LGYSCFYIHAKM 395
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 169/312 (54%), Gaps = 9/312 (2%)
Query: 6 PEGSQFDAKQYDSKMTELLATDGQEFFTSYDEVYDT----FDSMGLHENLLRGIYAYGFE 61
PE S DA D K T L + T+ +V T F+ L +LL+GIY GFE
Sbjct: 89 PEASS-DANGQDWKATLRLPPPDTRYQTA--DVTATKGNEFEDYFLKRDLLKGIYEKGFE 145
Query: 62 RPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTRELA 121
+PS IQ+ I G D++ +A++GTGKT FC +L++++ QA++L PTRELA
Sbjct: 146 KPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELA 205
Query: 122 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPD 181
Q +V + L YL ++V GGTS+R+D L VH +VGTPGR+ D+ ++
Sbjct: 206 LQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLK 265
Query: 182 SIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRI 241
M V+DEAD++LS F+ + ++ Q LP Q +FSAT P + + KP I
Sbjct: 266 DCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVI 325
Query: 242 LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS 301
+ D+LTL G+ Q+Y VE E K+ L L+ L I QS+IF N+ +V+ L K+
Sbjct: 326 NLM-DQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 383
Query: 302 NDHTVSATHGDM 313
++ H M
Sbjct: 384 LGYSCFYIHAKM 395
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 160/319 (50%), Gaps = 28/319 (8%)
Query: 9 SQFDAKQYDSKMTELLATDGQEFFTSYDEVYDTFDSMGLHENLLRGIYAYGFERPSAIQQ 68
S D D + A DG+E S + L + L + G IQ+
Sbjct: 80 SDHDEYDLDGDNNNVEADDGEELAIS---------KLSLPQRLEESLEKRGITHLFPIQR 130
Query: 69 RGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQA----------LVLAPTR 118
+VP +G D+I +A++GTGKT F I+++L E A LVLAPTR
Sbjct: 131 AVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTR 190
Query: 119 ELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQS 177
ELA+Q+EK ++ YL CV GG S Q L GV VVGTPGR+ D++ +S
Sbjct: 191 ELAKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRS 247
Query: 178 LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNK 237
L+ ++ VLDEAD+ML+ GF++ + I + LP K Q +FSATMP ++ RK+++
Sbjct: 248 LKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDN 307
Query: 238 PVRI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI-TQSVIFVNTRRKVDW 294
P+ I + +DE EGIK Y K L DL A ++++F T+R D
Sbjct: 308 PLNIDLVGDQDEKLAEGIK-LYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADE 366
Query: 295 LTDKMRSNDHTVSATHGDM 313
++ + SN A HGD+
Sbjct: 367 VSLAL-SNSIATEALHGDI 384
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 160/319 (50%), Gaps = 28/319 (8%)
Query: 9 SQFDAKQYDSKMTELLATDGQEFFTSYDEVYDTFDSMGLHENLLRGIYAYGFERPSAIQQ 68
S D D + A DG+E S + L + L + G IQ+
Sbjct: 80 SDHDEYDLDGDNNNVEADDGEELAIS---------KLSLPQRLEESLEKRGITHLFPIQR 130
Query: 69 RGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQA----------LVLAPTR 118
+VP +G D+I +A++GTGKT F I+++L E A LVLAPTR
Sbjct: 131 AVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTR 190
Query: 119 ELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQS 177
ELA+Q+EK ++ YL CV GG S Q L GV VVGTPGR+ D++ +S
Sbjct: 191 ELAKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRS 247
Query: 178 LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNK 237
L+ ++ VLDEAD+ML+ GF++ + I + LP K Q +FSATMP ++ RK+++
Sbjct: 248 LKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDN 307
Query: 238 PVRI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI-TQSVIFVNTRRKVDW 294
P+ I + +DE EGIK Y K L DL A ++++F T+R D
Sbjct: 308 PLNIDLVGDQDEKLAEGIK-LYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADE 366
Query: 295 LTDKMRSNDHTVSATHGDM 313
++ + SN A HGD+
Sbjct: 367 VSLAL-SNSIATEALHGDI 384
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 135/251 (53%), Gaps = 5/251 (1%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F L LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 102 LNYELVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV- 159
+ Q ALVL TRELA QI YL KV GG +++ + +L+
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECP 167
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEML-SRGFKDQIYDIFQLLPGKIQVGV 218
H VVGTPGRV + R + L +++ F+LDE D+ML S + + +IF++ P QV +
Sbjct: 168 HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETL 277
FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ + + E K L DL + L
Sbjct: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDAL 286
Query: 278 AITQSVIFVNT 288
Q VIFV +
Sbjct: 287 DFNQVVIFVKS 297
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 135/251 (53%), Gaps = 5/251 (1%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F L LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 102 LNYELVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV- 159
+ Q ALVL TRELA QI YL KV GG +++ + +L+
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECP 167
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEML-SRGFKDQIYDIFQLLPGKIQVGV 218
H VVGTPGRV + R + L +++ F+LDE D+ML S + + +IF++ P QV +
Sbjct: 168 HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETL 277
FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ + + E K L DL + L
Sbjct: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDAL 286
Query: 278 AITQSVIFVNT 288
Q VIFV +
Sbjct: 287 DFNQVVIFVKS 297
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 141/257 (54%), Gaps = 19/257 (7%)
Query: 71 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQA----------LVLAPTREL 120
+VP +G D+I +A++GTGKT F I+++L E A LVLAPTREL
Sbjct: 40 LVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTREL 99
Query: 121 AQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLR 179
A+Q+EK ++ YL CV GG S Q L GV VVGTPGR+ D++ +SL+
Sbjct: 100 AKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156
Query: 180 PDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV 239
++ VLDEAD+ML+ GF++ + I + LP K Q +FSATMP ++ RK+++ P+
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216
Query: 240 RI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI-TQSVIFVNTRRKVDWLT 296
I + +DE EGIK Y K L DL A ++++F T+R D ++
Sbjct: 217 NIDLVGDQDEKLAEGIK-LYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVS 275
Query: 297 DKMRSNDHTVSATHGDM 313
+ SN A HGD+
Sbjct: 276 LAL-SNSIATEALHGDI 291
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 16/285 (5%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
TF+ G ++ I +E+P+AIQ + + G DVI A++G+GKTA F ++
Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288
Query: 101 QL--NYELVQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 155
+ EL + + ++ APTRELA QI + G++V A GG S E + L
Sbjct: 289 HIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 156 QAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIF-QLLPGKI 214
+AG VV TPGR+ DML+ ++L VLDEAD M GF+ Q+ I Q+ P +
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDR- 407
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV-----EKEEWKLET 269
Q +FSATMP + ++ R+ ++ P+R+ V + E I Q VNV EK W LE
Sbjct: 408 QTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQV-VNVIPSDAEKLPWLLEK 466
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
L + + + ++F + + VD + ++ N V+A HGD D
Sbjct: 467 LPGMIDEGDV---LVFASKKATVDEIEAQLTLNSFKVAALHGDKD 508
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 157/336 (46%), Gaps = 35/336 (10%)
Query: 10 QFDAKQYDSKMTELLATDGQEFFTSYDEVYD---------TFDSMGLHENLLRGIYAYGF 60
+ D D ++ E+ D + F ++ Y +++ L LL+ + G+
Sbjct: 274 RVDRHWSDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGY 333
Query: 61 ERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNY--------ELVQCQAL 112
++PS IQ I + DVI A++G+GKTA F +L ++ E A+
Sbjct: 334 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAV 393
Query: 113 VLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDM 172
V+APTRELAQQIE+ YLG +V + VGG S+ E + G V+ TPGR+ D
Sbjct: 394 VMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDC 453
Query: 173 LRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPG---------------KI--Q 215
L R+ + VLDEAD M+ GF+ Q+ + +P KI
Sbjct: 454 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRT 513
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 275
+FSATMPP + RK++ PV + + T + I Q +V + KE K L L +
Sbjct: 514 TYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQ-HVIMMKESEKFFRLQKLLD 572
Query: 276 TLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHG 311
L +++FVNT++ D + + + V+ HG
Sbjct: 573 ELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHG 608
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 135/253 (53%), Gaps = 12/253 (4%)
Query: 31 FFTSYDEVY---DTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSG 87
FF++ D V DTF + L LLR G+++P+ IQ I G D+ A +G
Sbjct: 155 FFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITG 214
Query: 88 TGKTATFCSGILQQLNYE---LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 144
+GKTA F L++L + + + L+L PTRELA QI +++ L + +K VG
Sbjct: 215 SGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVG 274
Query: 145 GTSVREDQRILQAGVHTVVGTPGRVFDMLRRQ-SLRPDSIKMFVLDEADEMLSRGFKDQI 203
G SVRE + +L++ VV TPGR+ D LR S+ D + + +LDEAD +L GF +I
Sbjct: 275 GLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEI 334
Query: 204 YDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEK- 262
++ +L P + Q +FSATM E E+ + +NKP+R+ G+ + V + +
Sbjct: 335 TELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRT 394
Query: 263 ----EEWKLETLC 271
+E L +LC
Sbjct: 395 REANQEAVLLSLC 407
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 144/278 (51%), Gaps = 13/278 (4%)
Query: 45 MGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 102
+G+ +++ + G E+ IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 121 LGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 180
Query: 103 ----NYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQA 157
+ Q LVLAPTRELA+Q+EK R L C+ GGT + + R L
Sbjct: 181 FNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRELNY 237
Query: 158 GVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
G+ VGTPGR+ D+++R +L ++ VLDEAD+ML GF + + I Q LP K Q
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 218 VFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 275
+FSATMP +T+K++N P+ I + D+ +GI + + + + E
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE 357
Query: 276 TLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
+ ++F T+R D L + + + A HGD+
Sbjct: 358 HGKGGKCIVFTQTKRDADRLAFGL-AKSYKCEALHGDI 394
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 156/297 (52%), Gaps = 19/297 (6%)
Query: 33 TSYDEVYDT---FDSMGLHENLLRGIYA-YGFERPSAIQQRGI----VPFCKGLDVIQQA 84
TS D Y + F+ + L L++G+Y FE+PS IQ + P K L I QA
Sbjct: 81 TSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHL--IAQA 138
Query: 85 QSGTGKTATFCSGILQQLNYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 144
+G+GKT F G+L +++ L + QAL + PTRELA Q +V++ +G + G+ V
Sbjct: 139 HNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVP 198
Query: 145 GTS--VREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSR-GFKD 201
++ R H V+GTPG + + + L + +K+ V DEAD ML+ GF+D
Sbjct: 199 DSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRD 258
Query: 202 Q----IYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFY 257
+ DI ++ P QV +FSAT + + + P ++ VKR++L L+ +KQ+
Sbjct: 259 DSLKIMKDIGRVNPN-FQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYK 317
Query: 258 VNVEKEEWKLETLCD-LYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
V KE+ K+E + D + E I Q++IFV T+ + + + V++ HG++
Sbjct: 318 VVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNL 374
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 6/278 (2%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F +G + +L + GF P+ IQ +G KG D+I A++G+GKT ++ +
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 101 QLNYELVQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 155
+N + + LVLAPTRELA QI++ G +K GG R L
Sbjct: 160 HVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 156 QAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQ 215
Q GV V+ TPGR+ DM+ + + VLDEAD ML GF QI I + Q
Sbjct: 220 QKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQ 279
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 275
+SAT P E ++++KF+ P ++++ +L + V+V E K L L E
Sbjct: 280 TLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE 339
Query: 276 TLAI-TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
+ ++ ++F++T++ D +T ++R + + HGD
Sbjct: 340 DIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGD 377
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 147/279 (52%), Gaps = 15/279 (5%)
Query: 45 MGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-N 103
+G+ +++ + + G E+ IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 104 YELVQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQA 157
Y + LVLAPTRELA+Q+EK R L C+ GGT + + R L
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRQLDY 225
Query: 158 GVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
GV VGTPGRV D+++R +L ++ VLDEAD+ML GF + + I + LP K Q
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 218 VFSATMPPEALEITRKFMNKP--VRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY- 274
+FSATMP +T+K++N P V ++ D+ +GI + + + + + L
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSI-IADSYGRASIIGPLVT 344
Query: 275 ETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
E + ++F T+R D L+ + + A HGD+
Sbjct: 345 EHAKGGKCIVFTQTKRDADRLSYAL-ARSFKCEALHGDI 382
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 134/277 (48%), Gaps = 6/277 (2%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F +N+L I GF P+ IQ +G KG D+I A++G+GKT + L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 102 LNYELVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
++ + Q L+LAPTRELA QI++ R G GV+ GG R L+
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 157 AGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQV 216
GV V+ TPGR+ DML Q + VLDEAD ML GF+ QI I + Q
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 346
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTL-EGIKQFYVNVEKEEWKLETLCDLYE 275
++SAT P E + R+F+ P + ++ +L + I Q V E L L +
Sbjct: 347 LLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQ 406
Query: 276 TLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
+ ++ +IFV T+R D +T ++R + A HGD
Sbjct: 407 LMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGD 443
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 148/279 (53%), Gaps = 8/279 (2%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F+S+ L N+ I G++ P+ IQ++ + G+DV+ A++G+GKTA F +L++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 102 LNYELVQ--CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 159
L + Q +AL+L+PTR+LA+Q K + LG + ++V VGG S+ + L G
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 160 HTVVGTPGRVFDMLRR---QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQV 216
++ TPGR+ +L +LR +++ V DEAD + GF +Q++ I L Q
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLR--TVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQT 207
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYET 276
+FSAT+P E + + +P + + + +K ++ V EE L + E
Sbjct: 208 LLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLYLVREH 267
Query: 277 LAI-TQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
++ Q++IFV+T+ V+++ + + S +GDMD
Sbjct: 268 ISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMD 306
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 134/277 (48%), Gaps = 6/277 (2%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F +N+L I GF P+ IQ +G KG D+I A++G+GKT + L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 102 LNYELVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
++ + Q L+LAPTRELA QI++ R G GV+ GG R L+
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 157 AGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQV 216
GV V+ TPGR+ DML Q + VLDEAD ML GF+ QI I + Q
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 346
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKRDELTL-EGIKQFYVNVEKEEWKLETLCDLYE 275
++SAT P E + R+F+ P + ++ +L + I Q V E L L +
Sbjct: 347 LLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQ 406
Query: 276 TLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
+ ++ +IFV T+R D +T ++R + A HGD
Sbjct: 407 LMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGD 443
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 119/231 (51%), Gaps = 14/231 (6%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F L LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 102 LNYELVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV- 159
+ Q ALVL TRELA QI YL KV GG +++ + +L+
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECP 167
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEML-SRGFKDQIYDIFQLLPGKIQVGV 218
H VVGTPGRV + R + L +++ F+LDE D+ML S + + +IF++ P QV +
Sbjct: 168 HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Query: 219 FSATMPPEALEITRKFMNKPVRILVKRDELTLE--GIKQFYVNVEKEEWKL 267
FSAT+ E + +KFM +D L E ++ F VE EW+L
Sbjct: 228 FSATLSKEIRPVCKKFM---------QDFLENETVSVRLFSFGVENSEWRL 269
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 120/215 (55%), Gaps = 5/215 (2%)
Query: 78 LDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTRELAQQIEKVMRALGDYL-G 136
+DVI QA+SG GKTA F LQQ+ Q ALVL TRELA QI YL
Sbjct: 1 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 60
Query: 137 VKVHACVGGTSVREDQRILQAGV-HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEML 195
KV GG +++ + +L+ H VVGTPGRV + R + L +++ F+LDE D+ML
Sbjct: 61 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120
Query: 196 -SRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGI 253
S + + +IF++ P QV +FSAT+ E + +KFM P+ I V + +LTL G+
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 254 KQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNT 288
Q Y+ + + E K L DL + L Q VIFV +
Sbjct: 181 VQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKS 214
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 135/292 (46%), Gaps = 46/292 (15%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
F L LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 102 LNYELVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGV- 159
+ Q ALVL TRELA QI YL KV GG +++ + +L+
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECP 167
Query: 160 HTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEML-SRGFKDQIYDIFQLLPGKIQVGV 218
H VVGTPGRV + R + L +++ F+LDE D+ML S + + +IF++ P QV +
Sbjct: 168 HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Query: 219 FSATMPPEALEITRKFMN-----------------------------------------K 237
FSAT+ E + +KFM
Sbjct: 228 FSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNID 287
Query: 238 PVRILVKRD-ELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNT 288
P+ I V + +LTL G+ Q Y+ + + E K L DL + L Q VIFV +
Sbjct: 288 PMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKS 338
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 138/269 (51%), Gaps = 12/269 (4%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
TF S GL LL + G++ P+ IQ + I G ++ A +G+GKTA+F I+
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 101 QLNY--------ELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 152
+ + A+VLAPTREL Q+E + LG L K VGG +
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 153 RILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPG 212
+Q GV ++GTPGRV D+L + ++ D+I FVLDE D ML RGF+DQ+ IFQ L
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-S 289
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCD 272
+ QV +FSAT+ E ++ + + + + + + Q + V+ ++ K + L D
Sbjct: 290 QPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKK-QKLFD 348
Query: 273 LYETLA--ITQSVIFVNTRRKVDWLTDKM 299
+ + +V++V++R D L + +
Sbjct: 349 ILRSQNHFKPPAVVYVSSRVGADLLANAI 377
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 138/269 (51%), Gaps = 12/269 (4%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
TF S GL LL + G++ P+ IQ + I G ++ A +G+GKTA+F I+
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 101 QLNY--------ELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 152
+ + A+VLAPTREL Q+E + LG L K VGG +
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 153 RILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPG 212
+Q GV ++GTPGRV D+L + ++ D+I FVLDE D ML RGF+DQ+ IFQ L
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-S 289
Query: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCD 272
+ QV +FSAT+ E ++ + + + + + + Q + V+ ++ K + L D
Sbjct: 290 QPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKK-QKLFD 348
Query: 273 LYETLA--ITQSVIFVNTRRKVDWLTDKM 299
+ + +V++V++R D L + +
Sbjct: 349 ILRSQNHFKPPAVVYVSSRVGADLLANAI 377
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 148/303 (48%), Gaps = 23/303 (7%)
Query: 33 TSYDEV---YDTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTG 89
TS D V +TF + L E L I + +P+ +Q+ I G D++ AQ+G+G
Sbjct: 136 TSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSG 195
Query: 90 KTATFC----SGILQQLNYEL------VQCQALVLAPTRELAQQIEKVMRALGDYLGVKV 139
KTA FC SGI++ + E V A++L+PTRELA QI R GVKV
Sbjct: 196 KTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKV 255
Query: 140 HACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGF 199
GGT V + R L+ GV +V TPGR+ D+L R + ++ LDEAD ML GF
Sbjct: 256 VVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGF 315
Query: 200 KDQIYDIFQLL----PGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ 255
+ QI I Q + PG Q +FSAT P E + F++ + + V R + + I Q
Sbjct: 316 EPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQ 375
Query: 256 ---FYVNVEKEEWKLETLCDLYETLAITQ---SVIFVNTRRKVDWLTDKMRSNDHTVSAT 309
F + +K ++ L E + +++FV T++ D L + + N +
Sbjct: 376 RVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTI 435
Query: 310 HGD 312
HGD
Sbjct: 436 HGD 438
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 143/292 (48%), Gaps = 20/292 (6%)
Query: 40 DTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC---- 95
+TF + L + L I + RP+ +Q+ I D++ AQ+G+GKTA FC
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 96 SGILQQLNYE------LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 149
SGI++ + E V A++L+PTRELA QI + GVKV GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 150 EDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQL 209
+ R L+ G +V TPGR+ D+L R + I+ LDEAD ML GF+ QI I +
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 210 LP----GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265
+ G Q +FSAT P + + FM+ + + V R + + I Q V +E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQ-RVEFVQESD 389
Query: 266 KLETLCDLYETLAITQ-----SVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
K L DL TQ +++FV T+R D L + + N+ ++ HGD
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGD 441
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 143/292 (48%), Gaps = 20/292 (6%)
Query: 40 DTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC---- 95
+TF + L + L I + RP+ +Q+ I D++ AQ+G+GKTA FC
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 96 SGILQQLNYE------LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 149
SGI++ + E V A++L+PTRELA QI + GVKV GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 150 EDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQL 209
+ R L+ G +V TPGR+ D+L R + I+ LDEAD ML GF+ QI I +
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 210 LP----GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265
+ G Q +FSAT P + + FM+ + + V R + + I Q V +E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQ-RVEFVQESD 389
Query: 266 KLETLCDLYETLAITQ-----SVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
K L DL TQ +++FV T+R D L + + N+ ++ HGD
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGD 441
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 143/292 (48%), Gaps = 20/292 (6%)
Query: 40 DTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC---- 95
+TF + L + L I + RP+ +Q+ I D++ AQ+G+GKTA FC
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 96 SGILQQLNYE------LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 149
SGI++ + E V A++L+PTRELA QI + GVKV GGT +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 150 EDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQL 209
+ R L+ G +V TPGR+ D+L R + I+ LDEAD ML GF+ QI I +
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 330
Query: 210 LP----GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265
+ G Q +FSAT P + + FM+ + + V R + + I Q V +E
Sbjct: 331 MDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQ-RVEFVQESD 389
Query: 266 KLETLCDLYETLAITQ-----SVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
K L DL TQ +++FV T+R D L + + N+ ++ HGD
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGD 441
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 146/281 (51%), Gaps = 8/281 (2%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
TFDS+ L E I GF+ + IQ I P +G DV+ A++G+GKT F ++
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 101 QLNYELVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
L E + +V+ PTRELA Q + V L + V +GG + R + + +
Sbjct: 150 LLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIA 209
Query: 157 AGVHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQ 215
+G + V+ TPGR+ D L+ ++ +K V+DEAD +L F++ + I ++LP Q
Sbjct: 210 SGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQ 269
Query: 216 VGVFSATMPPEALEITRKFMNKPVRILVK--RDELTLEGIKQFYVNVEKEEWKLETLCDL 273
+FSAT + ++ R + PV + V R ++T EG++Q Y V ++ + + L
Sbjct: 270 TALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFL 329
Query: 274 YETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
+ L + ++F +T + V + T+ M+ +D VS HG MD
Sbjct: 330 KKNLN-KKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMD 369
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 151/305 (49%), Gaps = 27/305 (8%)
Query: 33 TSYDEV---YDTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTG 89
TS D V +TF + L E L I + +P+ +Q+ I +G D++ AQ+G+G
Sbjct: 149 TSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSG 208
Query: 90 KTATFC----SGILQQLNYE------LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKV 139
KTA FC SGI++ + + V A++L+PTRELA QI + GVKV
Sbjct: 209 KTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKV 268
Query: 140 HACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGF 199
GGT + + R L+ GV +V TPGR+ D+L R + I+ LDEAD ML GF
Sbjct: 269 VVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGF 328
Query: 200 KDQIYDIFQ---LLP-GKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ 255
+ QI I + + P G Q +FSAT P E + F+ + + V R + + I Q
Sbjct: 329 EPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQ 388
Query: 256 ---FYVNVEKEEWKLETLCDLYET-----LAITQSVIFVNTRRKVDWLTDKMRSNDHTVS 307
F ++ +K ++ L E A+T ++FV T+R D L + + N +
Sbjct: 389 RVEFVLDSDKRSHLMDLLHAQRENGIQGKQALT--LVFVETKRGADSLENWLCINGFPAT 446
Query: 308 ATHGD 312
+ HGD
Sbjct: 447 SIHGD 451
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 118/228 (51%), Gaps = 9/228 (3%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
TF+S+ L +N + I GF R + IQ + I P G DV+ A++G+GKT F ++
Sbjct: 155 TFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVE 214
Query: 101 QLNYELV-----QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 155
L Y + LV+ PTRELA Q V + L Y V +GG + + IL
Sbjct: 215 LL-YRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEIL 273
Query: 156 QAGVHTVVGTPGRVFDMLRRQS-LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
GV+ +V TPGR+ D L + ++K V+DEAD +L + F++ + I LLP
Sbjct: 274 AKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTR 333
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVK--RDELTLEGIKQFYVNV 260
Q +FSAT + ++ R + PV I V R E+T EG++Q Y V
Sbjct: 334 QTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVV 381
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 141/292 (48%), Gaps = 16/292 (5%)
Query: 36 DEVYDTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFC-KGLDVIQQAQSGTGKTATF 94
+EV TF +G+ E L++ G++ PS IQ + PF +G DVI AQ+G+GKT F
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEAL-PFALEGKDVIGLAQTGSGKTGAF 63
Query: 95 CSGILQQLNYELVQCQ------------ALVLAPTRELAQQIEKVMRALGDYLGVKVHAC 142
ILQ L + + A VL+PTRELA QI + ALG + ++
Sbjct: 64 AIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVL 123
Query: 143 VGGTSVREDQRILQAGVHTVVGTPGRVFD-MLRRQSLRPDSIKMFVLDEADEMLSRGFKD 201
VGG + L H +V TPGR++D M + S+K VLDEAD +L+ F+
Sbjct: 124 VGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEK 183
Query: 202 QIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVE 261
+ I + +P + + +FSATM + ++ R + PV+I T++ +KQ Y V
Sbjct: 184 SLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFV- 242
Query: 262 KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
++K L + + + S+IF T +L +RS G M
Sbjct: 243 AAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQM 294
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 10/277 (3%)
Query: 30 EFFTSYDEVYDT-----FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQA 84
E FT+ + DT F+ +GL E + G +P+ +Q + G DV+ A
Sbjct: 43 EKFTNPNPSSDTTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLA 102
Query: 85 QSGTGKTATFCSGILQQLNYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 144
Q+G+GKTA F IL +L + ALV+ PTRELA Q+ + +ALG L ++ VG
Sbjct: 103 QTGSGKTAAFALPILHRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVG 162
Query: 145 GTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRP---DSIKMFVLDEADEMLSRGFKD 201
G + L + H V+ TPGR+ +L P K VLDEAD +L GF+D
Sbjct: 163 GMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQD 222
Query: 202 QIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVE 261
++ IFQ LP Q +FSATM + NK T++ + Q ++ +
Sbjct: 223 ELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFED 282
Query: 262 KE--EWKLETLCDLYETLAITQSVIFVNTRRKVDWLT 296
K+ E L + E I ++IFV+T R L+
Sbjct: 283 KDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLS 319
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 136/278 (48%), Gaps = 10/278 (3%)
Query: 46 GLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-NY 104
GL +L + +E+P IQ + + G D I A++G+GKT F +L+ + +
Sbjct: 197 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 256
Query: 105 ELVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 160
V+ LV+APTREL QQI +R LG++ GG+ V + L+ G
Sbjct: 257 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 316
Query: 161 TVVGTPGRVFDMLRRQSLRPDSIK---MFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
VV TPGR+ D+L S + +++ V+DEAD M GF+ QI I Q + + Q
Sbjct: 317 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 376
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY-ET 276
+FSAT P + + RK +NKPV I V + + I Q V V E + L +L E
Sbjct: 377 LFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQL-VEVRPESDRFLRLLELLGEW 435
Query: 277 LAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
+ ++FV ++ K D L M + + + HG D
Sbjct: 436 SEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKD 473
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 137/281 (48%), Gaps = 16/281 (5%)
Query: 46 GLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-NY 104
GL +L + +E+P IQ + + G D I A++G+GKT F +L+ + +
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 594
Query: 105 ELVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 160
V+ LV+APTREL QQI +R LG++ GG+ V + L+ G
Sbjct: 595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 654
Query: 161 TVVGTPGRVFDMLRRQSLRPDSIK---MFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
VV TPGR+ D+L S + +++ V+DEAD M GF+ QI I Q + + Q
Sbjct: 655 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 714
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWK----LETLCDL 273
+FSAT P + + RK +NKPV I V + + I Q V V E + LE L +
Sbjct: 715 LFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQL-VEVRPESDRFLRLLELLGEW 773
Query: 274 YETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
E I ++FV ++ K D L M + + + HG D
Sbjct: 774 SEKGKI---LVFVQSQEKCDALYRDMIKSSYPCLSLHGGKD 811
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 141/283 (49%), Gaps = 17/283 (6%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
+F++ G LLR + + GF P+ IQ + +G D++ A++G+GKT + G L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 100 --QQL-NYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
Q++ N + LVL+PTRELA QI++ G + GG R L+
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 157 AGVHTVVGTPGRVFDML--RRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
G VV TPGR+ D+L RR SLR I VLDEAD ML GF+ QI I + +P K
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLR--QISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEWKLET 269
Q +++AT P +I + P ++ + DEL ++ V EK+ +LE
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQR-RLEQ 395
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
+ E ++ +IF +T+R D LT + + +A HGD
Sbjct: 396 ILRSQEPG--SKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGD 435
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 141/283 (49%), Gaps = 17/283 (6%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
+F++ G LLR + + GF P+ IQ + +G D++ A++G+GKT + G L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 100 --QQL-NYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
Q++ N + LVL+PTRELA QI++ G + GG R L+
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 157 AGVHTVVGTPGRVFDML--RRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
G VV TPGR+ D+L RR SLR I VLDEAD ML GF+ QI I + +P K
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLR--QISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEWKLET 269
Q +++AT P +I + P ++ + DEL ++ V EK+ +LE
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQR-RLEQ 395
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
+ E ++ +IF +T+R D LT + + +A HGD
Sbjct: 396 ILRSQEPG--SKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGD 435
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 141/283 (49%), Gaps = 17/283 (6%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
+F++ G LLR + + GF P+ IQ + +G D++ A++G+GKT + G L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 100 --QQL-NYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
Q++ N + LVL+PTRELA QI++ G + GG R L+
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 157 AGVHTVVGTPGRVFDML--RRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
G VV TPGR+ D+L RR SLR I VLDEAD ML GF+ QI I + +P K
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLR--QISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEWKLET 269
Q +++AT P +I + P ++ + DEL ++ V EK+ +LE
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQR-RLEQ 395
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
+ E ++ +IF +T+R D LT + + +A HGD
Sbjct: 396 ILRSQEPG--SKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGD 435
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 141/283 (49%), Gaps = 17/283 (6%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
+F++ G LLR + + GF P+ IQ + +G D++ A++G+GKT + G L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 100 --QQL-NYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
Q++ N + LVL+PTRELA QI++ G + GG R L+
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 157 AGVHTVVGTPGRVFDML--RRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKI 214
G VV TPGR+ D+L RR SLR I VLDEAD ML GF+ QI I + +P K
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLR--QISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 215 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEWKLET 269
Q +++AT P +I + P ++ + DEL ++ V EK+ +LE
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQR-RLEQ 395
Query: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
+ E ++ +IF +T+R D LT + + +A HGD
Sbjct: 396 ILRSQEPG--SKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGD 435
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 138/281 (49%), Gaps = 13/281 (4%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGI- 98
+F++ GL LLR +Y+ GF PS IQ + + D++ A++G+GKT + G
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 99 -LQQL-NYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 156
LQ++ N + LVL+PTRELA QI+ G + GG + ++
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 157 AGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQV 216
GV VV TPGR+ D+L + + + VLDEAD ML GF+ QI I +P K Q
Sbjct: 282 RGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQT 341
Query: 217 GVFSATMPPEALEITRKFMNKPVRILVKR-DEL----TLEGIKQFYVNVEKEEWKLETLC 271
+++AT P E +I + P ++ + DEL ++ + +EK +LE +
Sbjct: 342 LMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHS-RLEQIL 400
Query: 272 DLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
E ++ +IF +T+R D L + + +A HGD
Sbjct: 401 RSQEPG--SKIIIFCSTKRMCDQLARNL-TRTFGAAAIHGD 438
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 130/270 (48%), Gaps = 20/270 (7%)
Query: 39 YDTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 98
Y TF+S GL +LR + + GF P+ IQ + + D++ A++G+GKT G
Sbjct: 434 YITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTL----GY 489
Query: 99 LQQLNYELVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
L L C+ L+LAPTRELA QI+ G + GG
Sbjct: 490 LIPAFILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGP 549
Query: 151 DQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLL 210
+ L+ G VV TPGR+ D+L + + + + VLDEAD ML GF+ QI I +
Sbjct: 550 QLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEI 609
Query: 211 PGKIQVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNV----EKEEW 265
P + Q +++AT P E +I + PV++ + R DEL YV V EKE
Sbjct: 610 PPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKER- 668
Query: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWL 295
+LE + E ++ +IF +T+R D L
Sbjct: 669 RLEQILRSQERG--SKVIIFCSTKRLCDHL 696
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 139/289 (48%), Gaps = 18/289 (6%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGIL 99
F M +L + G +P+ IQ +G+ G D+I A +G+GKT F I+
Sbjct: 147 NFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIM 206
Query: 100 QQLNYELVQCQA-------LVLAPTRELAQQIEKVMRAL------GDYLGVKVHACVGGT 146
L E++ A L++ P+RELA+Q +V+ Y ++ C+GG
Sbjct: 207 IALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGI 266
Query: 147 SVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDI 206
+R +++ GVH VV TPGR+ DML ++ + D+ + LDEAD ++ GF+D I ++
Sbjct: 267 DMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREV 326
Query: 207 FQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEEW 265
F + Q +FSATMP + R + KPV + V R L+ I++ V K+E
Sbjct: 327 FDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQE--VEYVKQEA 384
Query: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
K+ L + + + +IF + VD + + + A HG D
Sbjct: 385 KIVYLLECLQKTS-PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKD 432
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGIL 99
TF L EN+L FE+PS IQ G D+I A++G+GKT F I+
Sbjct: 117 TFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIM 174
Query: 100 QQLN--------YELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 151
L + V LVL+PTRELA QI V+R G+ G+K GG+S
Sbjct: 175 HVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQ 234
Query: 152 QRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLP 211
+++GV V+GTPGR+ D++ LR + VLDEAD ML GF++ + I
Sbjct: 235 ISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTN 294
Query: 212 GKIQVGVFSATMPPEALEITRKFMN-KPVRILV 243
Q+ +FSAT P + ++ ++FM+ P+++++
Sbjct: 295 KVRQMVMFSATWPLDVHKLAQEFMDPNPIKVII 327
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 18/289 (6%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGIL 99
F M LLR + G P+ IQ +G+ G D+I A +G+GKT F I+
Sbjct: 98 NFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMII 157
Query: 100 QQLNYELVQCQA-------LVLAPTRELAQQ----IEKVMRALGD--YLGVKVHACVGGT 146
L E++ A LV+ P+RELA+Q +E+ + +L + Y ++ C+GG
Sbjct: 158 LALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGV 217
Query: 147 SVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDI 206
+R +++ GVH VV TPGR+ D+L ++ + D+ ++ LDEAD ++ GF+D I +
Sbjct: 218 DMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHV 277
Query: 207 FQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEEW 265
F + Q +FSATMP + + KPV + V R L+ I++ V K+E
Sbjct: 278 FDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQE--VEYVKQEA 335
Query: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMD 314
K+ L + + +IF + VD + + + A HG D
Sbjct: 336 KIVYLLECLQK-TTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKD 383
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 122/233 (52%), Gaps = 12/233 (5%)
Query: 77 GLDVIQQAQSGTGKTATFCSGILQQLNY--------ELVQCQALVLAPTRELAQQIEKVM 128
G ++ A +G+GKTA+F I+ + + A+VLAPTREL Q+E
Sbjct: 10 GKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQA 69
Query: 129 RALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVL 188
+ LG L K VGG + +Q GV ++GTPGRV D+L + ++ D+I FVL
Sbjct: 70 KMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVL 129
Query: 189 DEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL 248
DE D ML RGF+DQ+ IFQ L + QV +FSAT+ E ++ + + + +
Sbjct: 130 DEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNK 188
Query: 249 TLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ--SVIFVNTRRKVDWLTDKM 299
+ + Q + V+ ++ K + L D+ + + +V++V++R D L + +
Sbjct: 189 PNKAVNQLAIWVDAKQKK-QKLFDILRSQNHFKPPAVVYVSSRVGADLLANAI 240
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 127/257 (49%), Gaps = 14/257 (5%)
Query: 46 GLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-NY 104
GL +L + +E+P IQ + + G D I A++G+GKT F +L+ + +
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 461
Query: 105 ELVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 160
V+ LV+APTREL QQI +R LG+ GG+ V + L+ G
Sbjct: 462 PPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTE 521
Query: 161 TVVGTPGRVFDMLRRQSLRPDSIKM---FVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
VV TPGR+ D+L S + +++ V+DEAD M GF+ QI I Q + Q
Sbjct: 522 IVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTV 581
Query: 218 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFY-VNVEKEEWK--LETLCDLY 274
+FSAT P + + RK +NKPV I V + + I Q + E E + LE L + Y
Sbjct: 582 LFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLELLGEWY 641
Query: 275 ETLAITQSVIFVNTRRK 291
E + ++FV ++ K
Sbjct: 642 EKGKV---LVFVRSQEK 655
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 136/264 (51%), Gaps = 16/264 (6%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F+ +GL L+R + G E+P+ IQQ I +G DV+ +A++G+GKT + +LQ
Sbjct: 47 SFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106
Query: 101 QL------NYELVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQR 153
+L + + + A +L P+REL QQ+ + +L + V++ A +S+ D R
Sbjct: 107 KLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMR 166
Query: 154 ILQAGVHTV-VGTPGRVFDMLRRQSLRP----DSIKMFVLDEADEMLSRGFKDQIYDIFQ 208
AG+ + V TP + L P +S+ + VLDEAD +LS G++D + +
Sbjct: 167 NALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTS 226
Query: 209 LLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD----ELTLEGIKQFYVNVEKEE 264
++P + Q + SAT + ++ + ++ P+ + + D E ++QF+++ ++
Sbjct: 227 IIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQD 286
Query: 265 WKLETLCDLYETLAITQSVIFVNT 288
L L L + + +IF+NT
Sbjct: 287 KLLHILALLKLEVVQKKILIFINT 310
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 13/269 (4%)
Query: 53 RGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL----NYELVQ 108
R +Y+ GF PS IQ + + D++ A++G+GKT + L N +
Sbjct: 242 RMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMG 301
Query: 109 CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGR 168
LVL+PTRELA QI+ G + GG + ++ GV VV TPGR
Sbjct: 302 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGR 361
Query: 169 VFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEAL 228
+ D+L + + + VLDEAD ML GF+ QI I +P K Q +++AT P E
Sbjct: 362 LNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVR 421
Query: 229 EITRKFMNKPVRILVKR-DEL----TLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 283
+I + P ++ + DEL ++ + +EK +LE + E ++ +
Sbjct: 422 KIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHS-RLEQILRSQEPG--SKII 478
Query: 284 IFVNTRRKVDWLTDKMRSNDHTVSATHGD 312
IF +T+R D L + + +A HGD
Sbjct: 479 IFCSTKRMCDQLARNL-TRTFGAAAIHGD 506
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 122/235 (51%), Gaps = 24/235 (10%)
Query: 35 YDEVYDT--FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
+D +Y FD + L+ + A G + + +Q + G D + +A++GTGK+
Sbjct: 368 HDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSM 427
Query: 93 TF----CSGILQQLN-----YELVQCQALVLAPTRELAQQIEKVMRAL-GDYLGVKVHAC 142
F +L+ +N +++ L+L PTRELA QI +AL ++ G+ V
Sbjct: 428 AFLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTL 487
Query: 143 VGGTSVREDQRILQA-GVHTVVGTPGRVFDMLRRQS---LRPDSIKMFVLDEADEMLSRG 198
+GGT R DQ+ L++ ++ TPGR+ D + +S R ++K+F++DEAD +L G
Sbjct: 488 IGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLG 547
Query: 199 FKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGI 253
FK + I LP + Q +FSAT+P E ++ ++++KRD ++ I
Sbjct: 548 FKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVS--------QLVLKRDHSYIDTI 594
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 117/247 (47%), Gaps = 30/247 (12%)
Query: 79 DVIQQAQSGTGKTATFCSGILQQLNY-----ELVQCQ---ALVLAPTRELAQQIEKVMRA 130
DVI + +G+GKTA F +L ++ E Q + ALV+ PTRELA QIE+
Sbjct: 241 DVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVK 300
Query: 131 LGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDE 190
YLG K + G S+ + L G V+ TPGR+ D L R+ + + VLDE
Sbjct: 301 FSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDE 360
Query: 191 ADEMLSRGFKDQIYDIFQLLPGKI-----------------QVGVFSATMPPEALEITRK 233
AD M+ F+ Q+ ++ ++P +FSATM + RK
Sbjct: 361 ADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARK 420
Query: 234 FMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQS-VIFVNTRRKV 292
F+ PV + + T + I Q V + KE K L L + L ++ ++FVNTR KV
Sbjct: 421 FLRNPVVVTIGE---TTKFITQ-QVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKV 476
Query: 293 DWLTDKM 299
D++ +
Sbjct: 477 DYIVKNL 483
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 62/333 (18%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
+F+ +GL ++LL + GF P+ +Q + KG D + Q+ +G+GKT + IL
Sbjct: 111 SFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILS 170
Query: 101 QL-------------NYELVQCQALVLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGT 146
++ N + + QA+++AP+REL QI +V + LG V VGG
Sbjct: 171 EIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGA 230
Query: 147 S-VREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYD 205
+ +R+++ + + VVGTPGR+ ++ + L + VLDE DE+LS F++ I+
Sbjct: 231 NRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHR 290
Query: 206 IFQLLPGKIQVG--------------VFSATMPPEALEITRKFMNKPVRILVKRDELT-- 249
I + + + G + SAT+P + + + ++PV LV+ +++T
Sbjct: 291 ILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPV--LVQANKVTPL 348
Query: 250 -----------------------------LEGIKQFYVNVEKEEWKLETLCDLYETLAIT 280
L + Y + K + K++TL L
Sbjct: 349 DTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQ 408
Query: 281 QSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
+ F+N R++ + K+ + + HGD+
Sbjct: 409 SVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDL 441
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 39 YDTFDSMGLHENLLRGIYAYGFERPSAIQQRGI-VPFCKGLDVIQQAQSGTGKTATFCSG 97
+ + SM LH L++ IY F+ P+ IQ+ V +G DVI A++G+GKT F
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 98 ILQQLNYELVQC--------------------QALVLAPTRELAQQIEKVMRALGDYLGV 137
ILQ+L E + +AL++ PTRELA Q+ + + L V
Sbjct: 249 ILQRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSV 308
Query: 138 KVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDML---RRQSLRPDSIKMFVLDEADEM 194
KV VGG + +R L+ VV TPGR+++++ + + S+ FVLDEAD M
Sbjct: 309 KVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRM 368
Query: 195 LSRGFKDQIYDIFQLLP 211
+ RG ++ I LLP
Sbjct: 369 VERGHFRELQSILDLLP 385
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 47 LHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYEL 106
L +++ + FE + +Q I C DV A +G+GKT F +++ L
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRST 82
Query: 107 V------QCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILQA-G 158
Q ++++PTREL+ QI V + L V VGG V+ D +I++ G
Sbjct: 83 SFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEG 142
Query: 159 VHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
+ ++GTPGR+ D++ R + L ++++ +LDEAD +L GF+ Q+ I LP + + G
Sbjct: 143 CNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTG 202
Query: 218 VFSATMPPEALEITRKFMNKPVRILVK-----------RDELTLEGIKQFYVNVEKEEWK 266
+FSAT E+ + + PVR+ V+ + T G+ Y+ E ++ K
Sbjct: 203 LFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADK-K 261
Query: 267 LETLCDLYETLAITQSVIFVNTRRKVDW----LTDKMRSNDHTVSATHGDM 313
L DL + + ++F T VD+ L+ ++ HGDM
Sbjct: 262 SSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDM 312
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 121/235 (51%), Gaps = 24/235 (10%)
Query: 35 YDEVYDT--FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
+D +Y FD + L+ + A G + + +Q + G D + +A++GTGK+
Sbjct: 321 HDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSM 380
Query: 93 TF----CSGILQQLNY-----ELVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHAC 142
F +L+ +N ++ AL+L PTRELA QI +AL + G+ V
Sbjct: 381 AFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTL 440
Query: 143 VGGTSVREDQRILQA-GVHTVVGTPGRVFDMLRRQS---LRPDSIKMFVLDEADEMLSRG 198
+GGT + DQ+ L++ ++ TPGR+ D + +S R ++K+F++DEAD +L G
Sbjct: 441 IGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLG 500
Query: 199 FKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGI 253
F+ + I LP + Q +FSAT+P E ++ ++++KRD ++ I
Sbjct: 501 FRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVS--------QLVLKRDHSYIDTI 547
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 23/276 (8%)
Query: 55 IYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQ---- 110
+ A G E IQ G D++ +A++G GKT F IL+ L + +
Sbjct: 111 LKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMG 170
Query: 111 ------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVG 164
LVL PTRELA+Q+ A G LG+ GG S + L+ GV VVG
Sbjct: 171 YGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVG 230
Query: 165 TPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLL--PGKIQVGVFSAT 222
TPGR+ D + RQ+L ++ VLDEADEML GF + + I + K+Q +FSAT
Sbjct: 231 TPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSAT 290
Query: 223 MPPEALEITRKFMNKPVRI--LVKRDELTLEG-IKQFYVNVEKEEWK--LETLCDLYETL 277
+P I+ +F+ + + LV D++ ++ + K + + Y +
Sbjct: 291 LPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCYSSG 350
Query: 278 AITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
Q++IF T+ +V L+ + + A HG++
Sbjct: 351 G--QTIIFAETKVQVSELSGLLDGS----RALHGEI 380
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 16/283 (5%)
Query: 47 LHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNY-- 104
L E+++ + GFE + +Q I C DV+ A +G+GKT F ++ +
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 82
Query: 105 ----ELVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQA-G 158
+ Q ++++PTREL+ QI KV L V VGG V D L+ G
Sbjct: 83 SYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEG 142
Query: 159 VHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
+ ++GTPGR+ DM++R + L ++++ +LDEAD +L GF+ Q+ I LP + + G
Sbjct: 143 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 202
Query: 218 VFSATMPPEALEITRKFMNKPVRIL--VKRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 275
+FSAT ++ + + + ++ + T G+ Y+ E ++ K L L
Sbjct: 203 LFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQ-KSSQLVHLLI 261
Query: 276 TLAITQSVIFVNTRRKVDW----LTDKMRSNDHTVSATHGDMD 314
+ V+F T VD+ L+ + +THG MD
Sbjct: 262 ENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMD 304
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
FD L L+ I G+E + +Q+ + KG DV+ +A++GTGKT F ++
Sbjct: 322 FDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEV 381
Query: 102 L--------NYELVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQ 152
+ + + ALV+ PTRELA Q L Y + V +GGT + +Q
Sbjct: 382 VVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQ 441
Query: 153 RILQAG-VHTVVGTPGRVFDMLRRQ---SLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQ 208
+ +Q +V TPGR+ D + + R +K+ VLDEAD +L GF+ I I
Sbjct: 442 KRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIIS 501
Query: 209 LLPGKIQVGVFSATMPPEALEI 230
+P + Q +FSAT+P E +I
Sbjct: 502 AVPKERQTFLFSATVPEEVRQI 523
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
FD L L+ I GFE + +Q+ + +G DV+ +A++GTGKT F ++
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 102 LNYELVQCQ--------ALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQ 152
+ + LV+ PTRELA Q L Y + V +GGT + +Q
Sbjct: 444 VIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQ 503
Query: 153 RILQAG-VHTVVGTPGRVFDMLRRQS---LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQ 208
R +Q +V TPGR+ D + S R +K+ VLDEAD +L GF+ I I
Sbjct: 504 RRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIA 563
Query: 209 LLPGKIQVGVFSATMPPEALEI 230
+P + Q +FSAT+P E +I
Sbjct: 564 AVPKQRQTFLFSATVPEEVRQI 585
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 47 LHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNY-- 104
L E+++ + GFE + +Q I C DV+ A +G+GKT F ++ +
Sbjct: 24 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 83
Query: 105 ----ELVQCQALVLAPTRELAQQIEKVMRALG-DYLGVKVHACVGGTSVREDQRILQA-G 158
+ Q ++++PTREL+ QI KV RA+ D+ + V D L+ G
Sbjct: 84 SYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCR--------EVEADMNTLEEEG 135
Query: 159 VHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVG 217
+ ++GTPGR+ DM++R + L ++++ +LDEAD +L GF+ Q+ I LP + + G
Sbjct: 136 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 195
Query: 218 VFSATMPPEALEITRKFMNKP 238
+FSAT ++ + + P
Sbjct: 196 LFSATQTQAVADLAKAGLRNP 216
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 4/270 (1%)
Query: 46 GLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYE 105
G +LR + GF+ P+ IQ++ I G + A +G+GKT F +L +L
Sbjct: 147 GCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRP 206
Query: 106 LVQ-CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVG 164
+A++L+P RELA Q + + L G H + + + + ++
Sbjct: 207 STDGIRAVILSPARELAAQTAREGKKL--IKGSNFHIRLMTKPLVKTADFSKLWCDVLIS 264
Query: 165 TPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPG-KIQVGVFSATM 223
TP R+ ++ + + ++ VLDE+D++ + QI + + I +FSAT+
Sbjct: 265 TPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATL 324
Query: 224 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSV 283
P E+ R M+ VR+++ R E +KQ V EE KL L + +
Sbjct: 325 PDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVL 384
Query: 284 IFVNTRRKVDWLTDKMRSNDHTVSATHGDM 313
IFV ++ + L D+++ + H D+
Sbjct: 385 IFVQSKERAKELYDELKCENIRAGVIHSDL 414
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 42 FDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 101
FD L L+GI GF+ + +Q+ + +G D++ +A++GTGKT F ++
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 102 L--------NYELVQCQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQ 152
+ + LV+ PTRELA Q L Y + V +GGT + +Q
Sbjct: 142 VIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQ 201
Query: 153 RILQ-AGVHTVVGTPGRVFDMLRRQS---LRPDSIKMFVLDEADEMLSRGFKDQIYDIFQ 208
R LQ + +V TPGR+ D + S R +K+ VLDEAD +L GF+ +I I
Sbjct: 202 RRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIA 261
Query: 209 LLPGKIQVGVFSATMPPEALEI 230
+P + Q +FSAT+ E +I
Sbjct: 262 AVPKQRQTFLFSATVSDEVRQI 283
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 9/183 (4%)
Query: 37 EVYDTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 96
++ + F +GL E ++ + E P+ IQ GI + V+ + +G+GKT +
Sbjct: 109 KLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLL 168
Query: 97 GILQQLNYELVQC---------QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 147
I+Q + + + +VL PTREL++Q+ +V +++ + + GG+
Sbjct: 169 PIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSR 228
Query: 148 VREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQIYDIF 207
+R + L + VVGTPGR+ + ++ I VLDEAD M RGF +I
Sbjct: 229 IRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFL 288
Query: 208 QLL 210
L
Sbjct: 289 APL 291
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 25/313 (7%)
Query: 17 DSKMTELLATDGQE--FFTSYDEVYDTFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPF 74
DSK+ + + DG+ F+ Y V F + + + RG+ + + +Q I
Sbjct: 49 DSKIGK--SEDGKNGTVFSRYAGVR-KFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHA 105
Query: 75 CKGLDVIQQAQSGTGKTATFCSGILQQLNYEL------VQCQALVLAPTRELAQQIEKVM 128
G D++ A++G+GKT F IL++L+ E V C ++++PTRELA Q V+
Sbjct: 106 LCGRDILGAARTGSGKTLAFVIPILEKLHRERWSPEDGVGC--IIISPTRELAAQTFGVL 163
Query: 129 RALGDYLGVKVHACVGGTSVREDQRILQAGVH---TVVGTPGRVFD-MLRRQSLRPDSIK 184
+G + +GG RE + + VH +V PGR+ M + ++
Sbjct: 164 NKVGKFHKFSAGLLIGG---REGVDVEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQ 220
Query: 185 MFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVK 244
+ +LDEAD +L FK Q+ I LP Q +FSAT + ++ R + P I V
Sbjct: 221 ILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYISVH 280
Query: 245 RDELTLEGIKQF-YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLT---DKMR 300
+ +T V + E KL+ L +T ++ ++F++T+++V ++ +K+R
Sbjct: 281 AEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLR 340
Query: 301 SNDHTVSATHGDM 313
+ + HG M
Sbjct: 341 PG-IPLKSLHGKM 352
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 49 ENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQ 108
E++L + GF P+ IQ+ + G D I AQ+G+GKT T+ I +N +
Sbjct: 85 EHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRSS 144
Query: 109 CQALVLAPTRELAQQIEKVMRALG-----DYLGVKVHACVGGTSVREDQRILQAGVHTV- 162
QA+++ PTREL Q+ KV R L D G V A + G ++R + L+A +
Sbjct: 145 VQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAIL 204
Query: 163 VGTPGRVFDMLRRQSLRPDSIKMFVLDEAD 192
V T + ML + R DS+++ V+DE D
Sbjct: 205 VATVASLCHMLEKHIFRIDSVRVLVVDEVD 234
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 41 TFDSMGLHENLLRGIYA-YGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 99
+F S+GL L + GFE P+ +Q + I G DV+ A +GTGKT + + ++
Sbjct: 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89
Query: 100 QQLNYELVQCQ------ALVLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGTSVREDQ 152
L + ALV+ PTREL Q+ E + + L + + +GG +++
Sbjct: 90 HHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEK 149
Query: 153 RILQAGVHTVVGTPGRVFDMLRR-QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLL 210
L+ G+ ++ TPGR+ D L+ S +++ + DEAD +L G+ +I I +LL
Sbjct: 150 ARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLL 208
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
TF +G E++++ + F+RP+ IQ P G I QSG+GKT + ++Q
Sbjct: 375 TFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQ 434
Query: 101 QLNYELVQCQA---------LVLAPTRELAQQIEKVMRALGDYLGVKVHACV--GGTSVR 149
+L E +Q + +VL PT ELA Q+ R++ GV + V GG R
Sbjct: 435 RLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKS-GVPFRSMVVTGGFRQR 493
Query: 150 EDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRG-FKDQIYDIFQ 208
L+ GV ++ TPGR ++ L +++ +LDE D + F+ + ++
Sbjct: 494 TQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLIN 553
Query: 209 LLPGKIQVGVFSATMPPEALEITRK----FMNKPVRILVKRDELTLEGIKQFYV------ 258
P Q +AT+P LEI K F + V ++ R +++F V
Sbjct: 554 SSPVTAQYLFVTATLP---LEIYNKLVEVFPDCEV-VMGPRVHRVSNALEEFLVDCSGDD 609
Query: 259 NVEKE-----EWKLETLCDLYETLAITQSVIFVN---TRRKVDWL 295
N EK + K L + E +++++IF N T RKV+ +
Sbjct: 610 NAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENI 654
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 23/154 (14%)
Query: 79 DVIQQAQSGTGKTATFCSGILQQLNYELVQC-QALVLAPTRELAQQIEKVMRALGDYLGV 137
D+ + +G+GKT ++ I+Q L V+C +ALV+ PTR+LA Q++ V A+ +G+
Sbjct: 74 DICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGL 133
Query: 138 KVHACVGGTSV-----------REDQRI----------LQAGVHTVVGTPGRVFDMLRR- 175
V + VG +S+ + D I L++ V +V TPGR+ D +
Sbjct: 134 SVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNT 193
Query: 176 QSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQL 209
+ + ++ V+DE D +L ++ + + QL
Sbjct: 194 KGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQL 227
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 31/193 (16%)
Query: 41 TFDSMGLHENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
++ S+GL +N+ + GF+RPS Q I G DVI A++G+GKT + + I+
Sbjct: 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIID 140
Query: 101 QLNYELVQCQ--------------ALVLAPTRELAQQIEKVMRALGDYLG---VKVHACV 143
QL + + +L+L P L +Q+ +++ L D G ++V A
Sbjct: 141 QLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVC 200
Query: 144 GGTSVREDQRILQAGVHTVVGTPGRVFDML------RRQSLRPDSIKMFVLDEADEMLSR 197
G Q +V TP + + + R + LR +K V DEAD +L
Sbjct: 201 GS------QGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFLR--CVKYVVFDEADMLLCG 252
Query: 198 GFKDQIYDIFQLL 210
F++QI + +L
Sbjct: 253 SFQNQIIRLINML 265