Miyakogusa Predicted Gene
- Lj3g3v0129230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0129230.1 Non Chatacterized Hit- tr|I3SBK2|I3SBK2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.38,0,domain
present in cyclins, TFIIB and Retinob,Cyclin-like; seg,NULL;
Cyclin-like,Cyclin-like; SUBFAMI,CUFF.40307.1
(481 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365... 419 e-117
AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 | chr1:30214694-302... 410 e-114
AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817... 374 e-104
AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like cy... 369 e-102
AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-167... 285 5e-77
AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 | chr5:17293227-172... 272 4e-73
AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 267 1e-71
AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | ... 266 2e-71
AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 254 9e-68
AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 249 2e-66
AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 | chr1:17303676-173... 246 3e-65
AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein ... 173 3e-43
AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 | chr1:28628046-286... 154 1e-37
AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 | chr3:362547... 152 4e-37
AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 | chr4... 152 5e-37
AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666... 149 4e-36
AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137... 148 8e-36
AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 | chr2:11401551-114... 148 8e-36
AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 | chr4:16901744-169... 137 2e-32
AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587... 136 4e-32
AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 124 1e-28
AT1G20590.1 | Symbols: | Cyclin family protein | chr1:7131166-7... 91 1e-18
AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 | chr1:12595110-125... 91 3e-18
AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 | chr1:125951... 90 3e-18
AT1G14750.1 | Symbols: SDS | Cyclin family protein | chr1:507967... 72 1e-12
AT1G14750.2 | Symbols: SDS | Cyclin family protein | chr1:507967... 71 2e-12
AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 57 4e-08
AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 54 3e-07
AT5G10440.1 | Symbols: CYCD4;2 | cyclin d4;2 | chr5:3280611-3282... 51 2e-06
AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 49 8e-06
>AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365218
FORWARD LENGTH=450
Length = 450
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/431 (52%), Positives = 279/431 (64%), Gaps = 44/431 (10%)
Query: 63 RKKRAVLQDVSNTCSESSYRSCFNATKNQAKKSKIAKPAQLNVPKVVPCVGGGLPRHQVD 122
RKKRAVL +++N S N +AK SK K + G GL
Sbjct: 52 RKKRAVLGEITNVNS--------NTAILEAKNSKQIKKGR----------GHGLA----- 88
Query: 123 SKAESLPQMGLRSEDTMCSFNFEDNAFLRPSSKQCG----------TDDNMFDSQTSGIS 172
S Q+ + +A + +S G T DN + S +
Sbjct: 89 ----STSQLATSVTSEVTDLQSRTDAKVEVASNTAGNLSVSKGTDNTADNCIEIWNSRLP 144
Query: 173 SYPLISQKKASQTVAAKKSSLAELQNVSQDPDFTDIDADSEDPQLCGLYATDIYNNFRVA 232
PL + AS A+KS++ V P F DID+D +DP LC LYA +I+ N RV+
Sbjct: 145 PRPL--GRSAS---TAEKSAVIGSSTVPDIPKFVDIDSDDKDPLLCCLYAPEIHYNLRVS 199
Query: 233 ELSRRP--SFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYI 290
EL RRP FME +Q+D+TQSMR ILVDWLVEVSEEY L +DTLYLTVYLIDWFL NY+
Sbjct: 200 ELKRRPLPDFMERIQKDVTQSMRGILVDWLVEVSEEYTLASDTLYLTVYLIDWFLHGNYV 259
Query: 291 ERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFA 350
+R +LQLLGITCMLIASKYEEI+APRIEEFCFITDNTYT+++VL+ME +VLK ++Q++
Sbjct: 260 QRQQLQLLGITCMLIASKYEEISAPRIEEFCFITDNTYTRDQVLEMENQVLKHFSFQIYT 319
Query: 351 PTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARW 410
PT KTFLRRFLRAAQAS +PS ++Y FL FLPS++AASAVFLA+W
Sbjct: 320 PTPKTFLRRFLRAAQASRLSPSLEVEFLASYLTELTLIDYHFLKFLPSVVAASAVFLAKW 379
Query: 411 TLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYTQEKFKGVAA 470
T+DQS+HPWNPTL+HY +YK SD+K +V ALQDLQLN GCPL+AIR KY QEK+K VA
Sbjct: 380 TMDQSNHPWNPTLEHYTTYKASDLKASVHALQDLQLNTKGCPLSAIRMKYRQEKYKSVAV 439
Query: 471 LTSPKLLETLF 481
LTSPKLL+TLF
Sbjct: 440 LTSPKLLDTLF 450
>AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 |
chr1:30214694-30216861 FORWARD LENGTH=461
Length = 461
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/422 (51%), Positives = 272/422 (64%), Gaps = 34/422 (8%)
Query: 64 KKRAVLQDVSNTCSESSYRSCFNATKNQAKKSKIAKPAQLNVPKVVPCVGGGLPRHQVDS 123
KKRAVL+D++N E+SY SCF+ K+ K + + + + D+
Sbjct: 68 KKRAVLKDITNVTCENSYTSCFSVAVENIKQIKKGRQSSSSSKVASSSATSQV----TDA 123
Query: 124 KAESLPQMGLRSEDTMCSFNFEDNAFLRPSSKQCGTDDNMFDSQTSGI--SSYPLISQKK 181
K E + S G ++F + G +SY +I+ K
Sbjct: 124 KVEVV-------------------------SNSAGASLSVFTDTSLGTNETSYSIIA-KP 157
Query: 182 ASQTVAAKKSSLAELQNVSQDPDFTDIDADSEDPQLCGLYATDIYNNFRVAELSRRP--S 239
+S++ ++ + P F DID+D +DP LC LYA DIY N RVAEL RRP
Sbjct: 158 SSRSPPRPFGTVERSCGGASSPKFVDIDSDDKDPLLCSLYAPDIYYNLRVAELKRRPFPD 217
Query: 240 FMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLG 299
FME QRD+T++MR ILVDWLVEVSEEY L DTLYLTVYLIDWFL NY+ER RLQLLG
Sbjct: 218 FMEKTQRDVTETMRGILVDWLVEVSEEYTLVPDTLYLTVYLIDWFLHGNYVERQRLQLLG 277
Query: 300 ITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRR 359
ITCMLIASKYEEI+APRIEEFCFITDNTYT+++VL+ME++VLK ++Q++ PT+KTFLRR
Sbjct: 278 ITCMLIASKYEEIHAPRIEEFCFITDNTYTRDQVLEMESQVLKHFSFQIYTPTSKTFLRR 337
Query: 360 FLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPW 419
FLRAAQ S N S M+Y FL FLPS+IAASAVFLA+WTL+QSSHPW
Sbjct: 338 FLRAAQVSFPNQSLEMEFLANYLTELTLMDYPFLKFLPSIIAASAVFLAKWTLNQSSHPW 397
Query: 420 NPTLQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYTQEKFKGVAALTSPKLLET 479
NPTL+HY +YK SD+K +V ALQDLQLN GC L +IR KY Q+KFK VA +S +L +
Sbjct: 398 NPTLEHYTTYKASDLKASVHALQDLQLNTKGCSLNSIRMKYRQDKFKSVAVFSSGELPDK 457
Query: 480 LF 481
LF
Sbjct: 458 LF 459
>AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817566
FORWARD LENGTH=437
Length = 437
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/433 (49%), Positives = 260/433 (60%), Gaps = 60/433 (13%)
Query: 52 KRAVSDN-TCLPRKKRAVLQDVSNTCSESSYRSCFNATKNQAKKSKIAKPAQLNVPKVVP 110
KR SDN T +K+RAVL+DV+NT +ES + N V
Sbjct: 60 KRMASDNITVCNQKRRAVLKDVTNTLAESIISTEGN---------------------VKA 98
Query: 111 CVGGGLPRHQVDSKAESLPQMGLRSEDTMCSFNFEDNAFLRPSSKQCGTDDNMFDSQTSG 170
C GG Q++ ED + + E + SK M +S +
Sbjct: 99 CKRGGKETKQIE-------------EDGLVDVDGEKSKLAEDLSKI-----RMVESLDAS 140
Query: 171 ISSYPLISQKKASQTVAAKKSSLAELQNVSQDPDFTDIDADSEDPQLCGLYATDIYNNFR 230
S QK+ + +V+ DID+ +DPQ C LYA IY++
Sbjct: 141 ASK-----QKE-------------DRSDVTDCVQIVDIDSGVQDPQFCSLYAASIYDSIN 182
Query: 231 VAELSRRPS--FMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKN 288
VAEL +RPS +M VQRDI +MR IL+DWLVEVSEEYKL +DTLYLTV LID F+S N
Sbjct: 183 VAELEQRPSTSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHN 242
Query: 289 YIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQL 348
YIE+ +LQLLGITCMLIASKYEEI+APR+EEFCFITDNTYT+ EVL ME +VL S ++L
Sbjct: 243 YIEKQKLQLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRL 302
Query: 349 FAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLA 408
PTTKTFLRRF+RAAQAS K P Y FL FLPS+IAASAVFLA
Sbjct: 303 SVPTTKTFLRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLA 362
Query: 409 RWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYTQEKFKGV 468
RWTLDQS+HPWN TLQHY Y+ S +K TVLA+++LQLN G L AI TKY Q+KFK V
Sbjct: 363 RWTLDQSNHPWNQTLQHYTRYETSALKNTVLAMEELQLNTSGSTLIAIHTKYNQQKFKRV 422
Query: 469 AALTSPKLLETLF 481
A LTSP+ + TLF
Sbjct: 423 ATLTSPERVNTLF 435
>AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like
cyclin 3B from Arabidopsis | chr5:3601811-3604466
REVERSE LENGTH=436
Length = 436
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/422 (48%), Positives = 257/422 (60%), Gaps = 43/422 (10%)
Query: 63 RKKRAVLQDVSNTCSESSYRSCFNATKNQAKKSKIAKPAQLNVPKVVPCVGGGLPRHQVD 122
+K+RAVL+DVSNT ++ Y +A + + +P + + + H
Sbjct: 53 QKRRAVLKDVSNTSADIIYSELRKGGNIKANRKCLKEPKKAAKEGANSAMDILVDMHTEK 112
Query: 123 SK-AESLPQMGLRSEDTMCSFNFEDNAFLRPSSKQCGTDDNMFDSQTSGISSYPLISQKK 181
SK AE L ++ + + NF+D + + + Q G
Sbjct: 113 SKLAEDLSKIRMAEAQDVSLSNFKD--------------EEITEQQEDG----------- 147
Query: 182 ASQTVAAKKSSLAELQNVSQDPDFTDIDADSEDPQLCGLYATDIYNNFRVAELSRRP--S 239
S + EL V DID++ EDPQ C LYA DIY+N VAEL +RP +
Sbjct: 148 ---------SGVMELLQV------VDIDSNVEDPQCCSLYAADIYDNIHVAELQQRPLAN 192
Query: 240 FMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLG 299
+ME VQRDI MR IL+DWLVEVS++YKL DTLYLTV LID FLS +YIER RLQLLG
Sbjct: 193 YMELVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQRLQLLG 252
Query: 300 ITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRR 359
++CMLIASKYEE++AP +EEFCFIT NTYT+ EVL ME ++L ++L PTTKTFLRR
Sbjct: 253 VSCMLIASKYEELSAPGVEEFCFITANTYTRPEVLSMEIQILNFVHFRLSVPTTKTFLRR 312
Query: 360 FLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPW 419
F++AAQAS K P + Y FL FLPS+IAASAVFLARWTLDQ+ HPW
Sbjct: 313 FIKAAQASYKVPFIELEYLANYLAELTLVEYSFLRFLPSLIAASAVFLARWTLDQTDHPW 372
Query: 420 NPTLQHYASYKPSDMKTTVLALQDLQLNIDGCPLTAIRTKYTQEKFKGVAALTSPKLLET 479
NPTLQHY Y+ +++K TVLA++DLQLN GC L A R KY Q KFK VA LTSPK + +
Sbjct: 373 NPTLQHYTRYEVAELKNTVLAMEDLQLNTSGCTLAATREKYNQPKFKSVAKLTSPKRVTS 432
Query: 480 LF 481
LF
Sbjct: 433 LF 434
>AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 |
chr1:16775035-16777182 REVERSE LENGTH=460
Length = 460
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 183/279 (65%), Gaps = 2/279 (0%)
Query: 205 FTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPS--FMETVQRDITQSMRAILVDWLVE 262
+ID+++ DPQLC +A DIY + R +E +RP +ME VQ+D+ SMR ILVDWL+E
Sbjct: 178 IVNIDSNNGDPQLCATFACDIYKHLRASEAKKRPDVDYMERVQKDVNSSMRGILVDWLIE 237
Query: 263 VSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCF 322
VSEEY+L +TLYLTV ID +LS N I R +LQLLG+ CM+IA+KYEEI AP++EEFC+
Sbjct: 238 VSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAKYEEICAPQVEEFCY 297
Query: 323 ITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXX 382
ITDNTY K+EVL ME++VL +++ APTTK FLRRF+RAA + P
Sbjct: 298 ITDNTYLKDEVLDMESDVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAPLMQLECMANYI 357
Query: 383 XXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQ 442
+ Y L+ PS++AASA+FLA++ LD + PWN TLQHY YK +++ V LQ
Sbjct: 358 AELSLLEYTMLSHSPSLVAASAIFLAKYILDPTRRPWNSTLQHYTQYKAMELRGCVKDLQ 417
Query: 443 DLQLNIDGCPLTAIRTKYTQEKFKGVAALTSPKLLETLF 481
L G L A+R KY+Q K+K VA P ++ F
Sbjct: 418 RLCSTAHGSTLPAVREKYSQHKYKFVAKKFCPSVIPQEF 456
>AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 |
chr5:17293227-17294789 FORWARD LENGTH=355
Length = 355
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 202/338 (59%), Gaps = 12/338 (3%)
Query: 151 RPSSKQCGTDDNMFDSQTSGISSYPLISQKKASQTVAAKKS----SLAELQNVSQDPDFT 206
R +S + D + + + P +S K S+ K+ S+ ++ ++ +
Sbjct: 18 RKASMEAAIDKERINKKRVVLGELPNLSNIKKSRKATTKQKKKSVSIPTIETLN-----S 72
Query: 207 DIDADSEDPQLCGLYATDIYNNFRVAELSRRP--SFMETVQRDITQSMRAILVDWLVEVS 264
DID S+DPQ+CG Y T I+ R E+ RP ++E +Q+D+T +MR +LVDWLVEV+
Sbjct: 73 DIDTRSDDPQMCGPYVTSIFEYLRQLEVKSRPLVDYIEKIQKDVTSNMRGVLVDWLVEVA 132
Query: 265 EEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFIT 324
EEYKL +DTLYL V ID FLS + + RLQLLG+T MLIASKYEEI P +++FC+IT
Sbjct: 133 EEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFCYIT 192
Query: 325 DNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXX 384
DNTYTK+E++KME ++L + ++L PT+ TFLRRF R AQ +
Sbjct: 193 DNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSYLSE 252
Query: 385 XXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDL 444
++Y + FLPS +AASAVFLAR+ + HPWN L+ Y YK D+K V + DL
Sbjct: 253 LSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMIHDL 312
Query: 445 QLNIDGCPLTAIRTKYTQEKFKGVAAL-TSPKLLETLF 481
L+ L AIR KY Q KFK VA + SP+L T+F
Sbjct: 313 YLSRKCGALEAIREKYKQHKFKCVATMPVSPELPLTVF 350
>AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17302584 FORWARD LENGTH=372
Length = 372
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 186/281 (66%), Gaps = 5/281 (1%)
Query: 206 TDIDADSEDPQLCGLYATDIYNNFRVAELSRR----PSFMETVQRDITQSMRAILVDWLV 261
+DID+ S+DPQ+CG Y DIY R E+ + P ++E VQ+D+T SMR +LVDWLV
Sbjct: 87 SDIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLV 146
Query: 262 EVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFC 321
EV+EEYKLG++TLYLTV ID FLS + + +LQL+G++ MLIASKYEEI+ P++++FC
Sbjct: 147 EVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISPPKVDDFC 206
Query: 322 FITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXX 381
+ITDNT++K++V+KME ++L + ++L PT TF+RRF R AQ K P
Sbjct: 207 YITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPHLQLEPLCCY 266
Query: 382 XXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLAL 441
++Y + F+PS++AASAVFLAR+ + HPWN L+ Y YK +D++ V +
Sbjct: 267 LSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGII 326
Query: 442 QDLQLNIDGCPLTAIRTKYTQEKFKGVAAL-TSPKLLETLF 481
DL L+ G L A+R KY KF+ VA + SP+L T +
Sbjct: 327 HDLYLSRRGGALQAVREKYKHHKFQCVATMPVSPELPVTFW 367
>AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 |
chr1:29081904-29084137 REVERSE LENGTH=442
Length = 442
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 183/279 (65%), Gaps = 8/279 (2%)
Query: 204 DFTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPS--FMETVQRDITQSMRAILVDWLV 261
+ +ID+D DPQLC +A DIY + RV+E+++RP+ +ME Q I SMR+IL+DWLV
Sbjct: 161 EIVNIDSDLMDPQLCASFACDIYEHLRVSEVNKRPALDYMERTQSSINASMRSILIDWLV 220
Query: 262 EVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFC 321
EV+EEY+L +TLYL V +D +L+ N I + LQLLG+TCM+IA+KYEE+ P++E+FC
Sbjct: 221 EVAEEYRLSPETLYLAVNYVDRYLTGNAINKQNLQLLGVTCMMIAAKYEEVCVPQVEDFC 280
Query: 322 FITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXX 381
+ITDNTY + E+L+ME+ VL ++L PT K FLRRFLRAAQ + PS
Sbjct: 281 YITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQGRKEVPSLLSECLACY 340
Query: 382 XXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTV--- 438
++Y L + PS++AASAVFLA++TL S PWN TL+HY SY+ M+ V
Sbjct: 341 LTELSLLDYAMLRYAPSLVAASAVFLAQYTLHPSRKPWNATLEHYTSYRAKHMEACVKNL 400
Query: 439 LALQDLQLNIDGCPLTAIRTKYTQEKFKGVAALTSPKLL 477
L L + +L+ D + AIR KY+Q K+K A P L
Sbjct: 401 LQLCNEKLSSD---VVAIRKKYSQHKYKFAAKKLCPTSL 436
>AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=369
Length = 369
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 180/279 (64%), Gaps = 5/279 (1%)
Query: 208 IDADSEDPQLCGLYATDIYNNFRVAELSRR----PSFMETVQRDITQSMRAILVDWLVEV 263
I++ S DPQ+C +A+DI R E + P ++E VQ D+T MRA+LVDWLVEV
Sbjct: 82 IESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLVEV 141
Query: 264 SEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFI 323
+EEYKL +DTLYLT+ +D FLS I R +LQL+G++ MLIASKYEEI P++E+FC+I
Sbjct: 142 AEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASKYEEIGPPKVEDFCYI 201
Query: 324 TDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXX 383
TDNT+TK+EV+ ME ++L + ++L +PT KTFLRRF R AQ K+
Sbjct: 202 TDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDSQLQIEFLCCYLS 261
Query: 384 XXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQD 443
++Y + +LPS+++ASAVFLAR+ + HPWN L+ Y YK +D++ V + D
Sbjct: 262 ELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGIIHD 321
Query: 444 LQLNIDGCPLTAIRTKYTQEKFKGVAAL-TSPKLLETLF 481
L L+ G L A+R KY Q K+K VA + SP+L F
Sbjct: 322 LYLSRRGNTLEAVRNKYKQHKYKCVATMPVSPELPLAFF 360
>AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=370
Length = 370
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 180/280 (64%), Gaps = 6/280 (2%)
Query: 208 IDADSEDPQLCGLYATDIYNNFRVAELSRR----PSFMETVQRDITQSMRAILVDWLVEV 263
I++ S DPQ+C +A+DI R E + P ++E VQ D+T MRA+LVDWLVEV
Sbjct: 82 IESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLVEV 141
Query: 264 SEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIAS-KYEEINAPRIEEFCF 322
+EEYKL +DTLYLT+ +D FLS I R +LQL+G++ MLIAS KYEEI P++E+FC+
Sbjct: 142 AEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYEEIGPPKVEDFCY 201
Query: 323 ITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXX 382
ITDNT+TK+EV+ ME ++L + ++L +PT KTFLRRF R AQ K+
Sbjct: 202 ITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDSQLQIEFLCCYL 261
Query: 383 XXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQ 442
++Y + +LPS+++ASAVFLAR+ + HPWN L+ Y YK +D++ V +
Sbjct: 262 SELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGIIH 321
Query: 443 DLQLNIDGCPLTAIRTKYTQEKFKGVAAL-TSPKLLETLF 481
DL L+ G L A+R KY Q K+K VA + SP+L F
Sbjct: 322 DLYLSRRGNTLEAVRNKYKQHKYKCVATMPVSPELPLAFF 361
>AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 |
chr1:17303676-17305197 FORWARD LENGTH=327
Length = 327
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/270 (46%), Positives = 176/270 (65%), Gaps = 4/270 (1%)
Query: 206 TDIDADSEDPQLCGLYATDIYNNFRVAELS--RRP--SFMETVQRDITQSMRAILVDWLV 261
+DIDA S+DPQ+CGLY +DIY R E+ RP ++E +Q DIT S R +LVDWLV
Sbjct: 41 SDIDARSDDPQMCGLYVSDIYEYLRELEVKPKLRPLHDYIEKIQEDITPSKRGVLVDWLV 100
Query: 262 EVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFC 321
EV+EE++L ++TLYLTV ID FLS + LQL+G++ M IASKYEE P++E+FC
Sbjct: 101 EVAEEFELVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYEEKRRPKVEDFC 160
Query: 322 FITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXX 381
+IT NTYTK++VLKME ++L + ++L PTT TFLRRF+R AQ K P+
Sbjct: 161 YITANTYTKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNLQLEPLCCY 220
Query: 382 XXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLAL 441
++Y + F+PS++AASAVFLAR+ + + HPW+ L+ YK +D++ V +
Sbjct: 221 LSELSMLDYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKYKAADLQVCVEIM 280
Query: 442 QDLQLNIDGCPLTAIRTKYTQEKFKGVAAL 471
DL L+ A+R KY Q KF+ VAA+
Sbjct: 281 LDLYLSRSEGASKAVREKYKQHKFQYVAAI 310
>AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein |
chr5:1859542-1861570 REVERSE LENGTH=445
Length = 445
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 153/281 (54%), Gaps = 7/281 (2%)
Query: 198 NVSQDPDFTDIDADSEDPQLCGL-YATDIYNNFRVAELSRRPSFMETVQRDITQSMRAIL 256
+ P DID +D L + Y D+Y+ ++ E +P +Q ++ + MRAIL
Sbjct: 158 GIVNKPKIIDIDESDKDNHLAAVEYVDDMYSFYKEVEKESQPKMYMHIQTEMNEKMRAIL 217
Query: 257 VDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPR 316
+DWL+EV +++L +TLYLTV +ID FLS + + LQL+GI+ +LIASKYEEI P+
Sbjct: 218 IDWLLEVHIKFELNLETLYLTVNIIDRFLSVKAVPKRELQLVGISALLIASKYEEIWPPQ 277
Query: 317 IEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXX 376
+ + ++TDN Y+ ++L ME +L + + L PT FL RF++A+ + +
Sbjct: 278 VNDLVYVTDNAYSSRQILVMEKAILGNLEWYLTVPTQYVFLVRFIKASMSDPE-----ME 332
Query: 377 XXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKT 436
M+Y L F PSM+AASAV+ AR +L++S W TLQ + Y S++
Sbjct: 333 NMVHFLAELGMMHYDTLTFCPSMLAASAVYTARCSLNKSP-AWTDTLQFHTGYTESEIMD 391
Query: 437 TVLALQDLQLNIDGCPLTAIRTKYTQEKFKGVAALTSPKLL 477
L L L A+ KY++ + GVA ++ K L
Sbjct: 392 CSKLLAFLHSRCGESRLRAVYKKYSKAENGGVAMVSPAKSL 432
>AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 |
chr1:28628046-28630199 REVERSE LENGTH=431
Length = 431
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 158/324 (48%), Gaps = 19/324 (5%)
Query: 161 DNMFDSQTSGISSYPLISQKKASQTVAAKKSSLAELQNVSQDPD------FTDIDA-DSE 213
D + G + P+ Q + K E+Q+ S D D DID+ D
Sbjct: 111 DRIITDVEEGDFNEPMFVQHTEAMLEEIDKMEGIEMQD-SNDIDAEVEESVMDIDSCDKN 169
Query: 214 DPQLCGLYATDIYNNFRVAELSR--RPSFMETVQRDITQSMRAILVDWLVEVSEEYKLGA 271
+P Y DIY ++ E P++ME Q DI + MR IL DWL+EV +++L
Sbjct: 170 NPLSVVEYINDIYCFYKKNECRSCVPPNYMEN-QHDINERMRGILFDWLIEVHYKFELME 228
Query: 272 DTLYLTVYLIDWFLS-KNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTK 330
+TLYLT+ LID FL+ +I R +LQL+G+T ML+A KYEE++ P +++ I+D YT+
Sbjct: 229 ETLYLTINLIDRFLAVHQHIARKKLQLVGVTAMLLACKYEEVSVPVVDDLILISDKAYTR 288
Query: 331 EEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNY 390
E+L ME + + + PT F+RRFL+AAQ+ K + Y
Sbjct: 289 TEILDMEKLMANTLQFNFCLPTPYVFMRRFLKAAQSDKK-----LELLSFFMIELCLVEY 343
Query: 391 GFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQLNIDG 450
L + PS +AASA++ A+ TL + W+ T + ++ Y + + L
Sbjct: 344 EMLQYTPSQLAASAIYTAQSTL-KGYEDWSKTSEFHSGYTEEALLECSRKMVGLHHKAGT 402
Query: 451 CPLTAIRTKYTQEKFKGVAALTSP 474
LT + KY KF G AA P
Sbjct: 403 GKLTGVHRKYNTSKF-GYAARIEP 425
>AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 |
chr3:3625475-3627139 REVERSE LENGTH=414
Length = 414
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 141/269 (52%), Gaps = 8/269 (2%)
Query: 207 DID-ADSEDPQLCGLYATDIYNNFRVAELSRRPSFMETVQRDITQSMRAILVDWLVEVSE 265
DID D E+ Y D+Y ++ +P Q +I + MR+IL+DWLVEV
Sbjct: 144 DIDYVDKENDLAAVEYVEDMYIFYKEVVNESKPQMYMHTQPEIDEKMRSILIDWLVEVHV 203
Query: 266 EYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITD 325
++ L +TLYLTV +ID FLS + R LQL+G++ +LIASKYEEI P++ + ++TD
Sbjct: 204 KFDLSPETLYLTVNIIDRFLSLKTVPRRELQLVGVSALLIASKYEEIWPPQVNDLVYVTD 263
Query: 326 NTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXX 385
N+Y ++L ME +L + + L PT FL RF++A+ + K
Sbjct: 264 NSYNSRQILVMEKTILGNLEWYLTVPTQYVFLVRFIKASGSDQK-----LENLVHFLAEL 318
Query: 386 XXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDLQ 445
M++ L F PSM+AASAV+ AR L+++ W TL+ + Y S + L +
Sbjct: 319 GLMHHDSLMFCPSMLAASAVYTARCCLNKTP-TWTDTLKFHTGYSESQLMDCSKLLAFIH 377
Query: 446 LNIDGCPLTAIRTKYTQEKFKGVAALTSP 474
L + KY++ +G AL SP
Sbjct: 378 SKAGESKLRGVLKKYSKLG-RGAVALISP 405
>AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 |
chr4:17622129-17624208 REVERSE LENGTH=428
Length = 428
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 152/286 (53%), Gaps = 13/286 (4%)
Query: 201 QDPDFTDID-ADSEDPQLCGLYATDIYNNFRVAELSRRPSFMETVQRDITQSMRAILVDW 259
Q DID AD E+ Y DIY+ ++ E RP Q DI + MR ILV+W
Sbjct: 144 QKEKIVDIDSADVENDLAAVEYVEDIYSFYKSVESEWRPRDYMASQPDINEKMRLILVEW 203
Query: 260 LVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEE 319
L++V ++L +T YLTV ++D FLS + R LQL+G++ +L+++KYEEI P++E+
Sbjct: 204 LIDVHVRFELNPETFYLTVNILDRFLSVKPVPRKELQLVGLSALLMSAKYEEIWPPQVED 263
Query: 320 FCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXX 379
I D+ Y+ +++L ME +L + + L PT FL RF++A+ A K
Sbjct: 264 LVDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLARFIKASIADEK-----MENMV 318
Query: 380 XXXXXXXXMNYG-FLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMK--T 436
M+Y + F PSM+AASA++ AR +L Q W TL+H+ Y + +
Sbjct: 319 HYLAELGVMHYDTMIMFSPSMVAASAIYAARSSLRQVP-IWTSTLKHHTGYSETQLMDCA 377
Query: 437 TVLALQDLQLNIDGCPLT---AIRTKYTQEKFKGVAALTSPKLLET 479
+LA Q + +G + A+R KY++++ VA + K L T
Sbjct: 378 KLLAYQQWKQQEEGSESSTKGALRKKYSKDERFAVALIPPAKALLT 423
>AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666261
FORWARD LENGTH=429
Length = 429
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 152/286 (53%), Gaps = 8/286 (2%)
Query: 194 AELQNVSQDPDFTDIDA-DSEDPQLCGLYATDIYNNFRVAE-LSRRPSFMETVQRDITQS 251
E+++V+ + DID DS++ Y D+Y +R E S P Q D+ +
Sbjct: 143 VEMEDVTVEEPIVDIDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPVDYMMQQIDLNEK 202
Query: 252 MRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEE 311
MRAIL+DWL+EV +++ L +TL+LTV LID FLSK + R +LQL+G+ +L+A KYEE
Sbjct: 203 MRAILIDWLIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALLLACKYEE 262
Query: 312 INAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNP 371
++ P +E+ I+D YT+ +VL+ME +L + + + PT FL+RFL+AAQA K
Sbjct: 263 VSVPVVEDLVLISDKAYTRNDVLEMEKTMLSTLQFNISLPTQYPFLKRFLKAAQADKK-- 320
Query: 372 SXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKP 431
+ Y L F PS++AA++V+ A+ TLD S WN T + + Y
Sbjct: 321 ---CEVLASFLIELALVEYEMLRFPPSLLAATSVYTAQCTLD-GSRKWNSTCEFHCHYSE 376
Query: 432 SDMKTTVLALQDLQLNIDGCPLTAIRTKYTQEKFKGVAALTSPKLL 477
+ L L LT + KY+ KF +A + L
Sbjct: 377 DQLMECSRKLVSLHQRAATGNLTGVYRKYSTSKFGYIAKCEAAHFL 422
>AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137273
REVERSE LENGTH=429
Length = 429
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 145/273 (53%), Gaps = 15/273 (5%)
Query: 207 DIDA-DSEDPQLCGLYATDI---YNNFRVAELS-RRPSFMETVQRDITQSMRAILVDWLV 261
DIDA D +P Y D+ Y NF +LS P++M+ Q+D+ + MR IL+DWL+
Sbjct: 162 DIDACDKNNPLAAVEYIHDMHTFYKNFE--KLSCVPPNYMDN-QQDLNERMRGILIDWLI 218
Query: 262 EVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFC 321
EV +++L +TLYLT+ +ID FL+ + I R +LQL+G+T +L+A KYEE++ P +++
Sbjct: 219 EVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLI 278
Query: 322 FITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXX 381
I+D Y++ EVL ME + + + PT F++RFL+AAQ+ K
Sbjct: 279 LISDKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFLKAAQSDKK-----LEILSFF 333
Query: 382 XXXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLAL 441
+ Y L +LPS +AASA++ A+ TL + W+ T + + Y + +
Sbjct: 334 MIELCLVEYEMLEYLPSKLAASAIYTAQCTL-KGFEEWSKTCEFHTGYNEKQLLACARKM 392
Query: 442 QDLQLNIDGCPLTAIRTKYTQEKFKGVAALTSP 474
LT + KY KF AA T P
Sbjct: 393 VAFHHKAGTGKLTGVHRKYNTSKFCH-AARTEP 424
>AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 |
chr2:11401551-11403205 FORWARD LENGTH=387
Length = 387
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 138/269 (51%), Gaps = 7/269 (2%)
Query: 207 DIDADSEDPQLCGL-YATDIYNNFRVAELSRRPSFMETVQRDITQSMRAILVDWLVEVSE 265
DIDA + +L + Y DI+ +R E Q +I + MR+IL+DWLV+V
Sbjct: 115 DIDAVDANNELAAVEYVEDIFKFYRTVEEEGGIKDYIGSQPEINEKMRSILIDWLVDVHR 174
Query: 266 EYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITD 325
+++L +TLYLT+ L+D FLS + R LQLLG+ MLIA KYEEI AP + +F I+D
Sbjct: 175 KFELMPETLYLTINLVDRFLSLTMVHRRELQLLGLGAMLIACKYEEIWAPEVNDFVCISD 234
Query: 326 NTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXX 385
N Y +++VL ME +L + + PT FL R+++AA
Sbjct: 235 NAYNRKQVLAMEKSILGQVEWYITVPTPYVFLARYVKAAVPCDAE----MEKLVFYLAEL 290
Query: 386 XXMNYGFLNF-LPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDL 444
M Y + PSM+AASAV+ AR L ++ W TL+H+ Y ++ L L
Sbjct: 291 GLMQYPIVVLNRPSMLAASAVYAARQILKKTPF-WTETLKHHTGYSEDEIMEHAKMLMKL 349
Query: 445 QLNIDGCPLTAIRTKYTQEKFKGVAALTS 473
+ + L A+ KY+ + VA L S
Sbjct: 350 RDSASESKLIAVFKKYSVSENAEVALLPS 378
>AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 |
chr4:16901744-16903766 FORWARD LENGTH=429
Length = 429
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 145/265 (54%), Gaps = 8/265 (3%)
Query: 207 DIDADSEDPQLCGL-YATDIYNNFRVAE-LSRRPSFMETVQRDITQSMRAILVDWLVEVS 264
DID + L + Y D+Y+ +R E S P Q DI+ MRAIL+DWL+EV
Sbjct: 157 DIDEYDANNSLAAVEYVQDLYDFYRKTERFSCVPLDYMAQQFDISDKMRAILIDWLIEVH 216
Query: 265 EEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFIT 324
++++L +TL+LTV LID FLSK + R +LQL+G+ +L+A KYEE++ P +E+ I+
Sbjct: 217 DKFELMNETLFLTVNLIDRFLSKQAVARKKLQLVGLVALLLACKYEEVSVPIVEDLVVIS 276
Query: 325 DNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXX 384
D YT+ +VL+ME +L + + + PT FL+RFL+AAQ+ K
Sbjct: 277 DKAYTRTDVLEMEKIMLSTLQFNMSLPTQYPFLKRFLKAAQSDKK-----LEILASFLIE 331
Query: 385 XXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMKTTVLALQDL 444
++Y + + PS++AA+AV+ A+ T+ S WN T + + Y + + + L
Sbjct: 332 LALVDYEMVRYPPSLLAATAVYTAQCTIHGFSE-WNSTCEFHCHYSENQLLECCRRMVRL 390
Query: 445 QLNIDGCPLTAIRTKYTQEKFKGVA 469
LT + KY+ KF +A
Sbjct: 391 HQKAGTDKLTGVHRKYSSSKFGYIA 415
>AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587391
REVERSE LENGTH=648
Length = 648
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 155/293 (52%), Gaps = 21/293 (7%)
Query: 156 QCGTDDNMFDSQTSG----------ISSYPLISQKKASQTVAAKKSSLAELQNVSQDPD- 204
+C +D +S +SG +++ P ++K+ ++ S E + +P+
Sbjct: 320 KCLEEDTQGESSSSGNKDPTTKVLDVTAKPKSKRRKSFTSLLVNGSKFDEKNGETTEPEK 379
Query: 205 FTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPSFME--TVQRDITQSMRAILVDWLVE 262
ID +S ++ Y DIY + AE + P+ + +++ R IL++WL+E
Sbjct: 380 LPSIDDESNQLEVAE-YVDDIYQFYWTAE-ALNPALGHYLSAHAEVSPVTRGILINWLIE 437
Query: 263 VSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCF 322
V ++ L +TLYLT+ L+D +LS+ I + +QL+G+T +L+ASKYE+ PRI++
Sbjct: 438 VHFKFDLMHETLYLTMDLLDRYLSQVPIHKNEMQLIGLTALLLASKYEDYWHPRIKDLIS 497
Query: 323 ITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXX 382
I+ +YT+E++L ME +LK ++L APT F+ RFL+AAQ++ K
Sbjct: 498 ISAESYTREQILGMERSMLKQLKFRLNAPTPYVFMLRFLKAAQSNKK-----LEQLAFYL 552
Query: 383 XXXXXMNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKPSDMK 435
+ Y L + PS++ ASA+++AR TL + W L ++ Y S MK
Sbjct: 553 IELCLVEYEALKYKPSLLCASAIYVARCTLHMTP-VWTSLLNNHTHYNVSQMK 604
>AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17301695 FORWARD LENGTH=192
Length = 192
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 78/106 (73%), Gaps = 4/106 (3%)
Query: 206 TDIDADSEDPQLCGLYATDIYNNFRVAELSRR----PSFMETVQRDITQSMRAILVDWLV 261
+DID+ S+DPQ+CG Y DIY R E+ + P ++E VQ+D+T SMR +LVDWLV
Sbjct: 87 SDIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLV 146
Query: 262 EVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQLLGITCMLIAS 307
EV+EEYKLG++TLYLTV ID FLS + + +LQL+G++ MLIAS
Sbjct: 147 EVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIAS 192
>AT1G20590.1 | Symbols: | Cyclin family protein |
chr1:7131166-7132183 REVERSE LENGTH=199
Length = 199
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 284 FLSKNYIERPRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKS 343
FL+ + I R +LQL+G+T +L+A KYEE++ P +++ I+D Y++ EVL ME + +
Sbjct: 3 FLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANT 62
Query: 344 SAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAAS 403
+ PT F++RFL+AAQ+ K + Y L +LPS +AAS
Sbjct: 63 LQFNFSLPTPYVFMKRFLKAAQSDKK-----LEILSFFMIELCLVEYEMLEYLPSKLAAS 117
Query: 404 AVFLARWTLDQSSHPWNPTLQHYASYKPSDM 434
A++ A+ TL + W+ T + + Y +
Sbjct: 118 AIYTAQCTL-KGFEEWSKTCEFHTGYNEEQL 147
>AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 |
chr1:12595110-12599354 FORWARD LENGTH=483
Length = 483
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 179 QKKASQTVAAKKSSLAELQNVSQDPDFTDIDADSEDPQLCGL-YATDIYNNFRVAELSRR 237
Q K + + K++ A + P DID +D + + Y D+Y+ ++ E +
Sbjct: 228 QTKPVEVIETKRNKAA--CGIVNKPKILDIDESDKDNHVAAVEYVDDMYSFYKEVEKESQ 285
Query: 238 PSFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQL 297
P +Q ++ + MRAIL+DWL+EV +++L +TLYLTV +ID FL + + LQ
Sbjct: 286 PKMYMHIQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLYVKAVPKRELQ- 344
Query: 298 LGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFL 357
+ + ++TDN Y+ ++L M+ +L + + L PT FL
Sbjct: 345 -------------------VNDLVYVTDNAYSSRQILVMKKAILGNLEWYLTIPTQYVFL 385
Query: 358 RRFLRAA 364
F++A+
Sbjct: 386 FCFIKAS 392
>AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 |
chr1:12595110-12599628 FORWARD LENGTH=491
Length = 491
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 22/188 (11%)
Query: 179 QKKASQTVAAKKSSLAELQ-NVSQDPDFTDIDADSEDPQLCGL-YATDIYNNFRVAELSR 236
Q K + + K+++ ++ + P DID +D + + Y D+Y+ ++ E
Sbjct: 228 QTKPVEVIETKRNAQSKAACGIVNKPKILDIDESDKDNHVAAVEYVDDMYSFYKEVEKES 287
Query: 237 RPSFMETVQRDITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPRLQ 296
+P +Q ++ + MRAIL+DWL+EV +++L +TLYLTV +ID FL + + LQ
Sbjct: 288 QPKMYMHIQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLYVKAVPKRELQ 347
Query: 297 LLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTF 356
+ + ++TDN Y+ ++L M+ +L + + L PT F
Sbjct: 348 --------------------VNDLVYVTDNAYSSRQILVMKKAILGNLEWYLTIPTQYVF 387
Query: 357 LRRFLRAA 364
L F++A+
Sbjct: 388 LFCFIKAS 395
>AT1G14750.1 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=578
Length = 578
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 252 MRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR-LQLLGITCMLIASKYE 310
+R+I+V W+V+ + L +TL+L V L+D FLSK + R L L+GI + +A++ E
Sbjct: 386 LRSIMVQWIVKQCSDMGLQQETLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRIE 445
Query: 311 E---INAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQAS 367
E N+ R F I + Y++ EV+ ME V + ++ F PT FL +L+AA+A
Sbjct: 446 ENQPYNSIRKRNFT-IQNLRYSRHEVVAMEWLVQEVLNFKCFTPTIFNFLWFYLKAARA- 503
Query: 368 SKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLA 408
NP L F PS +AA+ V LA
Sbjct: 504 --NPEVERKAKSLAVTSLSDQTQ--LCFWPSTVAAALVVLA 540
>AT1G14750.2 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=410
Length = 410
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 252 MRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR-LQLLGITCMLIASKYE 310
+R+I+V W+V+ + L +TL+L V L+D FLSK + R L L+GI + +A++ E
Sbjct: 218 LRSIMVQWIVKQCSDMGLQQETLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRIE 277
Query: 311 E---INAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQAS 367
E N+ R F I + Y++ EV+ ME V + ++ F PT FL +L+AA+A
Sbjct: 278 ENQPYNSIRKRNFT-IQNLRYSRHEVVAMEWLVQEVLNFKCFTPTIFNFLWFYLKAARA- 335
Query: 368 SKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVFLA 408
NP L F PS +AA+ V LA
Sbjct: 336 --NPEVERKAKSLAVTSLSDQTQ--LCFWPSTVAAALVVLA 372
>AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=308
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 257 VDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR---LQLLGITCMLIASKYEEIN 313
++W+ + E ++ G L + +D FLS + + + LQLL + C+ +A+K EE
Sbjct: 82 LNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETE 141
Query: 314 APRIEEFCFITDNTYTKE--EVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNP 371
P + + + D + E V +ME VL ++L A T +++R FLR + P
Sbjct: 142 VPMLIDL-QVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEP 200
Query: 372 SXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASAVF-----LARWTLDQSS 416
S FL F PS +AA+ L R D SS
Sbjct: 201 SNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSS 250
>AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=318
Length = 318
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 11/165 (6%)
Query: 262 EVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR---LQLLGITCMLIASKYEEINAPRIE 318
E E ++ G L + +D FLS + + + LQLL + C+ +A+K EE P +
Sbjct: 97 EACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLI 156
Query: 319 EFCFITDNTYTKE--EVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPSXXXX 376
+ + D + E V +ME VL ++L A T +++R FLR + PS
Sbjct: 157 DL-QVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLI 215
Query: 377 XXXXXXXXXXXMNYGFLNFLPSMIAASAVF-----LARWTLDQSS 416
FL F PS +AA+ L R D SS
Sbjct: 216 SRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSS 260
>AT5G10440.1 | Symbols: CYCD4;2 | cyclin d4;2 | chr5:3280611-3282342
REVERSE LENGTH=298
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 247 DITQSMRAILVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYIERPR---LQLLGITCM 303
D+ ++R + W+ + EE + G + L + +D FLS + + + +QLL + C+
Sbjct: 63 DLDFNVRIQALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACL 122
Query: 304 LIASKYEEINAPRIEEF-----CFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLR 358
+A+K EE N P + + F+ + + V +ME VL ++L A T +++R
Sbjct: 123 SLAAKIEETNVPELMQLQVGAPMFV----FEAKSVQRMELLVLNVLRWRLRAVTPCSYVR 178
Query: 359 RFLRAAQASSKNPSXXXXXXXXXXXXXXXMNYGFLNFLPSMIAASA 404
FL + P FL F S IAA+
Sbjct: 179 YFLSKINGYDQEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAV 224
>AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=321
Length = 321
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 198 NVSQDPDFTDIDADSEDPQLCGLYATDIYNNFRVAELSRRPSF-METVQRDITQSM-RAI 255
++++D D T +D ++P + T I + VA+L + + ET+ T S R I
Sbjct: 19 SLNEDDDETIERSDKQEPH----FTTTIDDEDYVADLVLKENLRFETLPSKTTSSSDRLI 74
Query: 256 LVDWLVEVSEEYKLGADTLYLTVYLIDWFLSKNYI---ERPRLQLLGITCMLIASKYEEI 312
+DW++ + T Y+ + D FL K +I E ++LL + C+ +A+K EE
Sbjct: 75 AIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGKDETWAMRLLSVACLSLAAKMEER 134
Query: 313 NAPRIEEFCFITDNTYTKEEVLKMETEVLKSSAYQLFAPTTKTFLRRFLRAAQASSKNPS 372
P + ++ D + + + K E +L + +++ T + FL A+ S N S
Sbjct: 135 IVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFL--AKISQDNHS 192