Miyakogusa Predicted Gene

Lj3g3v0044250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0044250.1 Non Chatacterized Hit- tr|I1KGZ4|I1KGZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39705
PE,63.91,0,Ribonuclease H-like,Ribonuclease H-like domain; C2H2 and
C2HC zinc fingers,NULL; SUBFAMILY NOT NAMED,CUFF.40235.1
         (680 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...   476   e-134
AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...    83   7e-16

>AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
           domain | chr3:14321838-14323928 FORWARD LENGTH=696
          Length = 696

 Score =  476 bits (1225), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/668 (37%), Positives = 359/668 (53%), Gaps = 62/668 (9%)

Query: 7   DAQPNWRSRKKSGVWEHFTVKSDESGCSKAYCKSCKKPFAYINGSKQSGTSHLRRHISLG 66
           + QP  R +KKS VWEHFT+++ E  C +A+CK C + FAY NG+K +GTSHL+RHI  G
Sbjct: 57  ETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLKRHIFKG 116

Query: 67  IC-------QKNQQTLCS-----KTGADPPXXXXXXXXXXXISFDQERCNDKIAKMIILH 114
            C         +   L S     KT                ++F+Q++C  +IAKMII+H
Sbjct: 117 TCPALIHTHDNDNNPLMSTPYTPKTDTPRRRYRSQNNASPYVAFNQDKCRQEIAKMIIMH 176

Query: 115 DYPLHIVEHRGFIDFARALQPQFNPLSLNAVQEDCVAIYLRKKQNLLKLIDGIPGRVNLT 174
           DYPLH+V+H GF+ F +++QP F+ +S N VQ DCVA YL +KQN++K ++GIPGR  LT
Sbjct: 177 DYPLHMVQHPGFVSFVQSIQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLT 236

Query: 175 LDLWTSDQTSAYVFLRGHFVDCDWNLHHPILSVLKMPFPDSGGSLNQSINTCLHDWHLEG 234
           LD WTS  T  YVF+  H++D DW +   +L+VL   +P++  +L+ ++  C+ +W LEG
Sbjct: 237 LDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAVANCVSEWGLEG 296

Query: 235 RIFTLVLDKFFFSETLIGNLRGLFSIKNPEILNGQLLSQNCYSRVLTRLASDALWAMRET 294
           ++F +  +    S + + N+R    IKNP IL+GQL+  NC +R    LA D L   ++ 
Sbjct: 297 KLFNVTFN-HPASNSAVENIRPQLCIKNPGILDGQLVIGNCVARTFGSLAKDVLEKGKDV 355

Query: 295 IDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDQTKWDTVYHMLVAACELKQI 354
           I                                    +DDQT+W+T Y MLVAA ELK++
Sbjct: 356 IKNIRDSVKHVKTSESHEERFTELKEQLQVPSEKVLSLDDQTQWNTTYMMLVAASELKEV 415

Query: 355 FCCFGVGDPDCRMTLKLDDWKQVEILCTYLKCLYDAANILTVQPYPTANLFFPVVSKLQV 414
           F C    DPD +     +DW+ VE LCT+LK L++A + L     P+A  FF  V K Q 
Sbjct: 416 FSCLDTADPDYKKPPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQS 475

Query: 415 EFTHASLSQDAFCRNLIMPLQEKFDQYWRENCFVLAIAAAMDPRYKMKIVESTFANIYGE 474
           + + A   +D F   +   +QEK D+YWR+   VLA+A  MDPR+KMK+VE +F+ I+GE
Sbjct: 476 DLSRAIAGEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGE 535

Query: 475 NAELWIRIVENGLHEIFLEYNSVDVLSLTPSNGDEGDESITMKTDPFQKGSLETKPFQFQ 534
           +A   I+ V++G+HE+F EY ++     T S G +                         
Sbjct: 536 DAGKNIKTVDDGIHELFTEYMALPSPQNTTSEGGKA------------------------ 571

Query: 535 SGSFEIEPFPEGSFDFDGSPFDAEDGLPDIEFYISDFISNPSFKXXXXXXXXXXXXXRVP 594
                                   DGL D + YI +  +  + K             RV 
Sbjct: 572 ------------------------DGLSDFDTYIME-TTGQNLKSELDQYLDETLLPRVQ 606

Query: 595 DFDILRWWRINALKYPTLSRMASDILSISASTLPASSVFDTEIRKMDSYRSSLDSPTLEA 654
           +FD+L WW+ N LKYPTLS+MA DILSI  S      VFD E R+MD Y++SL   T+EA
Sbjct: 607 EFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEA 666

Query: 655 LICTKDWF 662
           LIC ++W 
Sbjct: 667 LICAREWL 674


>AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
           domain | chr1:6385614-6388005 FORWARD LENGTH=690
          Length = 690

 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 126/676 (18%), Positives = 238/676 (35%), Gaps = 87/676 (12%)

Query: 6   SDAQPNWRSRKKSGVWEHFTVKSDESGCSKAYCKSCKKPFAYINGSKQSGTSHLRRHISL 65
           S++ P  R +  + V+  +   + +S   K  CK C + ++    +   G     RH   
Sbjct: 42  SNSVPPKRKKTMTSVYLKYFETAPDSKTRK--CKFCGQSYSIATATGNLGRHLTNRHPGY 99

Query: 66  GICQKNQQTLCSKTGADPPXXXXXXXXXXXISFDQERCNDKIAKMIILHDYPLHIVEHRG 125
                +  T  S     P               D +  N  + K + L   P   V+   
Sbjct: 100 DKAAADVVTSSSVPQTPPAVVKPSQSQSKVPQLDYDHLNWLVLKWLALSSLPPSTVDETW 159

Query: 126 FIDFARALQPQFNPLSLNAVQEDCVAIYLRKKQNLLKLIDGIPGRVNLTLDLWTSDQTSA 185
             +  + L+P          +     ++   + ++   ++ I  +V++TL  W S +   
Sbjct: 160 LGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVKTTLEHIQSKVSVTLSFWNSYENIF 219

Query: 186 YVFLRGHFVDCDWNLHHPILSVLKMPFPDSGGSLNQSINTCLHDWHLEGRIFTLVLDKFF 245
           Y+ + G ++D +W+ H  +L + ++P+P  G  +  S+   L  + +E RI     D   
Sbjct: 220 YMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTYAIEDRILCCTHDN-- 277

Query: 246 FSETLIGNLRGLFSIKNPEILNGQLLSQNCY----SRVLTRLASDALWAMRETIDXXXXX 301
            SE  I     L      E  +GQ +   CY    ++ L  +  + L  ++  I      
Sbjct: 278 -SENAIHACHSL-----KEYFDGQKVLPFCYIPCAAQTLNDIIDEGLATIKPIIS-KVRE 330

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDQTKWDTVYHMLVAACELKQIFCCFGVG 361
                                         ID  ++W   Y M+   C+  +        
Sbjct: 331 FTQELNASTELSDDFIQLTTAYQEGNWKLPIDASSRWSGNYQMVNILCKASKSLDSVIRK 390

Query: 362 DPDC---RMTLKLDDWKQVEILCTY--LKCLYDAANILTVQPYPT---ANLFFPVVSKLQ 413
           + D    RM L   +   V I+  Y  L   +   N +      T   A LF   +S++ 
Sbjct: 391 NEDALENRMMLSSVEKNAVTIVHNYLDLDSFHKTTNDMCTNKDLTVGLALLFMDNISEM- 449

Query: 414 VEFTHASLSQDAFCRNLIMPLQEKFDQYWRENCFVLA-IAAAMDPRYKMKIVESTFANIY 472
           +     S     + R     + +K   Y  + C V   I A +DPR K + +  T     
Sbjct: 450 ITTCQKSCHNPDWLRTCAESMAQKARSYNTQVCNVFTYITAILDPRIKTEYIPETI---- 505

Query: 473 GENAELWIRIVENGLHEIFLEYNSVDVLS-----LTPSNGDEGDESITMKTDPFQKGSLE 527
             N E +I   +         Y+S    S       P   DEG  +I+   +  ++    
Sbjct: 506 --NLESYI---DEARSHFIRNYSSSHFTSSMTSGYRPQEVDEGGGNISFAEEIARRK--- 557

Query: 528 TKPFQFQSGSFEIEPFPEGSFDFDGSPFDAEDGLPDIEFYISDFISNPSFKXXXXXXXXX 587
                 + GS                   + + + ++  Y+S+ I               
Sbjct: 558 ------RRGSM------------------SNNVVDELTQYLSESI--------------- 578

Query: 588 XXXXRVP-DFDILRWWRINALKYPTLSRMASDILSISASTLPASSVFDTEIRKMDSYRSS 646
                VP   D+L WW++N+ +YP LS MA D L++ A++     +F  +  ++D  +  
Sbjct: 579 -----VPMQTDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEEIDKQKYC 633

Query: 647 LDSPTLEALICTKDWF 662
           +   + +++IC + W 
Sbjct: 634 MPHDSTQSVICIRSWI 649