Miyakogusa Predicted Gene

Lj2g3v3338980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3338980.1 Non Chatacterized Hit- tr|I1M689|I1M689_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.58,0,Es2,Nuclear
protein DGCR14; seg,NULL; ES-2 PROTEIN - RELATED,NULL,CUFF.40070.1
         (515 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07790.1 | Symbols:  | DGCR14-related | chr3:2487491-2489017 ...   620   e-178

>AT3G07790.1 | Symbols:  | DGCR14-related | chr3:2487491-2489017
           FORWARD LENGTH=508
          Length = 508

 Score =  620 bits (1600), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 316/465 (67%), Positives = 369/465 (79%), Gaps = 14/465 (3%)

Query: 52  VLDEDTYVEALEKIIERDYFPDISKLRDRLDWLEAIKTGDPVQIRDAQLKIMERRGGKKV 111
           VLDED YVEA+EKIIERDYFPDI+KLRDRLDW++A+KT DP+QIRDAQLKI+ERRG K  
Sbjct: 47  VLDEDAYVEAIEKIIERDYFPDITKLRDRLDWIQAVKTRDPIQIRDAQLKIIERRGKK-- 104

Query: 112 TSTSNPLDSSRISATPGSTFVRNFTPLDEFDGKTPITPXXXXXXXXXXXXXX---XXXVN 168
            +  +  D+   + TPGSTF+RNFTPLDEFDGKTP TP                    ++
Sbjct: 105 -ANHHVGDTEGKTQTPGSTFLRNFTPLDEFDGKTPRTPGVSGREFHGVEVDAGDGDEDID 163

Query: 169 TKLGLDQFLRRYTSEDNHSFSKILEKVNRKRKERFGFLNNGE-EDVKAIEDEKRDRITDG 227
             L LD+F RRYTSEDN SFSKILEKVNRK+KE++GFL  GE ED K+IED KRDRITDG
Sbjct: 164 LNLSLDEFFRRYTSEDNESFSKILEKVNRKKKEKYGFLLEGEKEDGKSIEDVKRDRITDG 223

Query: 228 YGTSYQPPASLEGWKYTPKNLLMYHPADNGEVPLTEEERAVRIKGATKEISLLNTRFHGK 287
           YGTS QPP++LEGWKYT KNLLMYHPAD GE PLTE ERAVR+ G TKEI   NTRFHGK
Sbjct: 224 YGTSDQPPSTLEGWKYTAKNLLMYHPADRGEAPLTEAERAVRLLGLTKEIVKGNTRFHGK 283

Query: 288 MMDSRPKDDGTVEVLYTPVAGATPMPMHLREGXXXXXXXXXXXXXTPNPFYLESEKKAEN 347
            MDSRP++DG+VE+LYTP+AG++PM +  R+              TPNPFY+ES+K+A+N
Sbjct: 284 TMDSRPREDGSVEILYTPIAGSSPMHISGRDRDKSKRYDLDDLRKTPNPFYVESDKRADN 343

Query: 348 GYSYVKTPSPAPGVDDSPFITWGEIEGTPMRLDMEDTPIDIGGSADGPHYNVPSAPARDA 407
           GYS+V+TPSPAPG+D+SPFITWGEI+GTPMRLD+EDTPIDIGGSADGPHYN+PSAP RD 
Sbjct: 344 GYSFVRTPSPAPGLDESPFITWGEIDGTPMRLDLEDTPIDIGGSADGPHYNIPSAPPRDV 403

Query: 408 KAHSLSREAARKLRARTK-MFHKPPLASPVRGGSASPNMRTLSPAAQKFMRNAIAKSSSS 466
           +AHSLSR+A+RKLR R+  MF KPPL SP R GSASPN+RTLSPAAQKF R AIAKSSS+
Sbjct: 404 RAHSLSRDASRKLRERSNSMFKKPPLPSPHRSGSASPNVRTLSPAAQKFFRKAIAKSSST 463

Query: 467 VDESLRASY-----RGSSPALSTPRNVRSVSRFAKDG-SMASRSP 505
           VDESLRASY     RG+SP   TP++VRS+SRF KDG S  +RSP
Sbjct: 464 VDESLRASYRGASPRGASPGAVTPKSVRSISRFGKDGTSSETRSP 508