Miyakogusa Predicted Gene

Lj2g3v3224280.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3224280.2 Non Chatacterized Hit- tr|I0Z2I3|I0Z2I3_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,29.48,2e-17,DNMT1-RFD,DNA (cytosine-5)-methyltransferase 1,
replication foci domain; FYVE/PHD zinc finger,Zinc f,CUFF.39900.2
         (466 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55390.2 | Symbols: EDM2 | ENHANCED DOWNY MILDEW 2 | chr5:224...   416   e-116
AT5G55390.1 | Symbols: EDM2 | ENHANCED DOWNY MILDEW 2 | chr5:224...   416   e-116
AT5G48090.1 | Symbols: ELP1 | EDM2-like protein1 | chr5:19484724...   160   2e-39
AT5G48090.2 | Symbols: ELP1 | EDM2-like protein1 | chr5:19485234...   154   2e-37

>AT5G55390.2 | Symbols: EDM2 | ENHANCED DOWNY MILDEW 2 |
           chr5:22448152-22454414 REVERSE LENGTH=1297
          Length = 1297

 Score =  416 bits (1070), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/427 (48%), Positives = 283/427 (66%), Gaps = 12/427 (2%)

Query: 24  NYHLEDDDEVPVCFSVLPVQWGGGDSERSIDACKEEVFLHGSTDNGLQKVFMQVTAWRFD 83
           NY+ EDDD+ PV F+ LP+QW     E  +D      +L G +DNGL  +   V AWR+D
Sbjct: 20  NYYFEDDDKEPVSFARLPIQWS---VEEKVDGSGLGFYLRGRSDNGLLPLHKLVKAWRYD 76

Query: 84  LSPVKPEVSLLSKDGKWVKLDKPRKSFQDTVRTILVTLHFLHSLKKNRRLSAKSVWNSLS 143
           LS  +PE+S+L+KD  W+KL++PRKS+ + +RT+LVTLH +  L++N + S K++W  L+
Sbjct: 77  LSNFQPEISVLTKDNIWIKLEEPRKSYGELIRTVLVTLHSIQFLRRNPQASEKALWEKLT 136

Query: 144 KDKELSFCELKPSQKDLLDHVTLIGEAAKRDAVLAKSKLLLMVMEEKRKNGKLSVEEAKD 203
           +   L   ++KPSQ DL+DH+ LI EAAKRD  LA SK +L  + +K    +L  E   D
Sbjct: 137 R--SLRSYDVKPSQNDLVDHIGLIAEAAKRDRNLANSKFILAFLTKKPTKRRLPDE---D 191

Query: 204 LARPEFIVDDIGNXXXXXXXXXXXXXXXSSYTVCALCDNGGALLCCDGECMRSFHATKAD 263
            A+ +FIV D                     +VCA+CDNGG +LCC+G C+RSFHATK D
Sbjct: 192 NAKDDFIVGDEDTYVASDEDELDDEDDDFFESVCAICDNGGEILCCEGSCLRSFHATKKD 251

Query: 264 GKDSDCFSLGLTRKEVDDIKTFYCKNCKYHQHQCFACGELGSSDKAKG-AKVFKC-AATC 321
           G+DS C SLG  + +V+ I+ ++C NC++  HQCF C  LGSSD + G A+VF+C +ATC
Sbjct: 252 GEDSLCDSLGFNKMQVEAIQKYFCPNCEHKIHQCFICKNLGSSDNSSGAAEVFQCVSATC 311

Query: 322 DCFYHPHCVAKLLSGVVKLAATELERNIANGDPFTCPVHYCHVCKEEENAVEPELQFAVC 381
             FYHPHCV + L    K  +  LER I  G+ +TCP+H C VC+  E   +  LQFAVC
Sbjct: 312 GYFYHPHCVTRRLRLGNKEESEALERQIIAGE-YTCPLHKCSVCENGEVKTDSNLQFAVC 370

Query: 382 RRCPKSYHRKCLPRNIAFECTDDGHTLQRAWEGLLPNNRILIYCLKHKIDDELGTPIRNH 441
           RRCPKSYHRKCLPR I+FE  +D   L RAW+GLL +NR+LIYC +H+ID+EL TP+R+H
Sbjct: 371 RRCPKSYHRKCLPREISFEDIEDEDILTRAWDGLL-HNRVLIYCQEHEIDEELLTPVRDH 429

Query: 442 IKFPITK 448
           +KFP T+
Sbjct: 430 VKFPFTE 436


>AT5G55390.1 | Symbols: EDM2 | ENHANCED DOWNY MILDEW 2 |
           chr5:22448152-22454414 REVERSE LENGTH=1297
          Length = 1297

 Score =  416 bits (1070), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/427 (48%), Positives = 283/427 (66%), Gaps = 12/427 (2%)

Query: 24  NYHLEDDDEVPVCFSVLPVQWGGGDSERSIDACKEEVFLHGSTDNGLQKVFMQVTAWRFD 83
           NY+ EDDD+ PV F+ LP+QW     E  +D      +L G +DNGL  +   V AWR+D
Sbjct: 20  NYYFEDDDKEPVSFARLPIQWS---VEEKVDGSGLGFYLRGRSDNGLLPLHKLVKAWRYD 76

Query: 84  LSPVKPEVSLLSKDGKWVKLDKPRKSFQDTVRTILVTLHFLHSLKKNRRLSAKSVWNSLS 143
           LS  +PE+S+L+KD  W+KL++PRKS+ + +RT+LVTLH +  L++N + S K++W  L+
Sbjct: 77  LSNFQPEISVLTKDNIWIKLEEPRKSYGELIRTVLVTLHSIQFLRRNPQASEKALWEKLT 136

Query: 144 KDKELSFCELKPSQKDLLDHVTLIGEAAKRDAVLAKSKLLLMVMEEKRKNGKLSVEEAKD 203
           +   L   ++KPSQ DL+DH+ LI EAAKRD  LA SK +L  + +K    +L  E   D
Sbjct: 137 R--SLRSYDVKPSQNDLVDHIGLIAEAAKRDRNLANSKFILAFLTKKPTKRRLPDE---D 191

Query: 204 LARPEFIVDDIGNXXXXXXXXXXXXXXXSSYTVCALCDNGGALLCCDGECMRSFHATKAD 263
            A+ +FIV D                     +VCA+CDNGG +LCC+G C+RSFHATK D
Sbjct: 192 NAKDDFIVGDEDTYVASDEDELDDEDDDFFESVCAICDNGGEILCCEGSCLRSFHATKKD 251

Query: 264 GKDSDCFSLGLTRKEVDDIKTFYCKNCKYHQHQCFACGELGSSDKAKG-AKVFKC-AATC 321
           G+DS C SLG  + +V+ I+ ++C NC++  HQCF C  LGSSD + G A+VF+C +ATC
Sbjct: 252 GEDSLCDSLGFNKMQVEAIQKYFCPNCEHKIHQCFICKNLGSSDNSSGAAEVFQCVSATC 311

Query: 322 DCFYHPHCVAKLLSGVVKLAATELERNIANGDPFTCPVHYCHVCKEEENAVEPELQFAVC 381
             FYHPHCV + L    K  +  LER I  G+ +TCP+H C VC+  E   +  LQFAVC
Sbjct: 312 GYFYHPHCVTRRLRLGNKEESEALERQIIAGE-YTCPLHKCSVCENGEVKTDSNLQFAVC 370

Query: 382 RRCPKSYHRKCLPRNIAFECTDDGHTLQRAWEGLLPNNRILIYCLKHKIDDELGTPIRNH 441
           RRCPKSYHRKCLPR I+FE  +D   L RAW+GLL +NR+LIYC +H+ID+EL TP+R+H
Sbjct: 371 RRCPKSYHRKCLPREISFEDIEDEDILTRAWDGLL-HNRVLIYCQEHEIDEELLTPVRDH 429

Query: 442 IKFPITK 448
           +KFP T+
Sbjct: 430 VKFPFTE 436


>AT5G48090.1 | Symbols: ELP1 | EDM2-like protein1 |
           chr5:19484724-19488383 FORWARD LENGTH=677
          Length = 677

 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 154/297 (51%), Gaps = 30/297 (10%)

Query: 172 KRDAVLAKSKLLLMVMEEKRKNGKLSVE-------EAKDLARPEFIVDDIGNXXXXXXXX 224
           KRD  L KSK L+  + +  +   + VE       +A+     + IV+++ +        
Sbjct: 2   KRDEDLTKSKFLITFLGKTSQTTPIEVELPTDHLQDAQTPMEQDSIVENMTDEENSSSSD 61

Query: 225 XXXXXXXSSYTVCALCDNGGALLCCDGECMRSFHATKADGKDSDCFSLGLTRK-EVDDIK 283
                      VC++CDNGG +LCC+G C+RSFH T ADG +++C SLG T K ++  + 
Sbjct: 62  DDSEANLQFDPVCSICDNGGYVLCCEGSCLRSFHPTIADGIETECESLGFTDKTQIQALG 121

Query: 284 TFYCKNCKYHQHQCFACGELGSSDKAKGAKVFKCAAT-CDCFYHPHCVAKLLSGVVKLAA 342
           T+ C NC Y QHQC+ACGELGSSD+    +VF C+A+ C  FYHP CVA+LL    +  A
Sbjct: 122 TYLCNNCLYKQHQCYACGELGSSDENFSQQVFPCSASNCGHFYHPECVARLLCADDQNKA 181

Query: 343 TELERNIANGDPFTCPVHYCHVCKEEENAVEPELQFAVCRRCPKSYHRKCLPRNIAF--- 399
            EL+  IA  D F CP+H C +C    N  E + Q+A C        ++ +  N+     
Sbjct: 182 EELQAKIAARDCFACPLHTCKLC----NMSEDKNQYA-CILLYADVAQQLITENVYLGIL 236

Query: 400 ---------ECTDDGHT--LQRAWEGLLPNNRILIYCLKHKIDDELGTPIRNHIKFP 445
                     C + G    L  A+  ++  +++L     H+ID  + TP R+H+ FP
Sbjct: 237 LLNSTLTMRHCKELGKVCFLTTAFLYIVSFHKLLNRA--HEIDGLILTPARDHLVFP 291


>AT5G48090.2 | Symbols: ELP1 | EDM2-like protein1 |
           chr5:19485234-19488383 FORWARD LENGTH=636
          Length = 636

 Score =  154 bits (388), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 129/226 (57%), Gaps = 23/226 (10%)

Query: 236 VCALCDNGGALLCCDGECMRSFHATKADGKDSDCFSLGLTRK-EVDDIKTFYCKNCKYHQ 294
           VC++CDNGG +LCC+G C+RSFH T ADG +++C SLG T K ++  + T+ C NC Y Q
Sbjct: 32  VCSICDNGGYVLCCEGSCLRSFHPTIADGIETECESLGFTDKTQIQALGTYLCNNCLYKQ 91

Query: 295 HQCFACGELGSSDKAKGAKVFKCAAT-CDCFYHPHCVAKLLSGVVKLAATELERNIANGD 353
           HQC+ACGELGSSD+    +VF C+A+ C  FYHP CVA+LL    +  A EL+  IA  D
Sbjct: 92  HQCYACGELGSSDENFSQQVFPCSASNCGHFYHPECVARLLCADDQNKAEELQAKIAARD 151

Query: 354 PFTCPVHYCHVCKEEENAVEPELQFAVCRRCPKSYHRKCLPRNIAF------------EC 401
            F CP+H C +C    N  E + Q+A C        ++ +  N+               C
Sbjct: 152 CFACPLHTCKLC----NMSEDKNQYA-CILLYADVAQQLITENVYLGILLLNSTLTMRHC 206

Query: 402 TDDGHT--LQRAWEGLLPNNRILIYCLKHKIDDELGTPIRNHIKFP 445
            + G    L  A+  ++  +++L     H+ID  + TP R+H+ FP
Sbjct: 207 KELGKVCFLTTAFLYIVSFHKLLNRA--HEIDGLILTPARDHLVFP 250