Miyakogusa Predicted Gene

Lj2g3v3106290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3106290.1 Non Chatacterized Hit- tr|G7K3C4|G7K3C4_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,92,5e-19,
,CUFF.39718.1
         (48 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42940.1 | Symbols:  | Predicted AT-hook DNA-binding family p...    48   2e-06

>AT2G42940.1 | Symbols:  | Predicted AT-hook DNA-binding family
           protein | chr2:17862497-17863270 REVERSE LENGTH=257
          Length = 257

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 4/49 (8%)

Query: 1   MQNQ-HYQNGRAHHLDISDLYAMPQNLLMNGAMPPEIYAWAPG-RNLSK 47
           MQNQ +YQNGR+  LD  D++ +PQNLL NG    +IY+W P  R +SK
Sbjct: 210 MQNQQYYQNGRSRPLD--DIHGLPQNLLTNGNSASDIYSWGPAQRVMSK 256